Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47565.t1 | KEH30946.1 | 73.4 | 399 | 79 | 3 | 1 | 399 | 1 | 372 | 2.40E-153 | 552 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47565.t1 | Q6X7J4 | 36.8 | 413 | 200 | 8 | 8 | 400 | 7 | 378 | 9.9e-23 | 109.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47565.t1 | A0A072UNJ4 | 73.4 | 399 | 79 | 3 | 1 | 399 | 1 | 372 | 1.7e-153 | 552.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene47565.t1 | TF | HB-WOX |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47565.t1 | MTR_4g088070 | 80.451 | 399 | 51 | 3 | 1 | 399 | 1 | 372 | 0.0 | 612 |
| MS.gene47565.t1 | MTR_7g025010 | 59.113 | 406 | 144 | 6 | 8 | 399 | 7 | 404 | 2.51e-154 | 449 |
| MS.gene47565.t1 | MTR_4g088080 | 72.372 | 333 | 75 | 3 | 1 | 333 | 1 | 316 | 9.30e-152 | 432 |
| MS.gene47565.t1 | MTR_2g015000 | 38.041 | 439 | 205 | 17 | 8 | 409 | 7 | 415 | 7.08e-61 | 204 |
| MS.gene47565.t1 | MTR_3g462480 | 66.667 | 72 | 24 | 0 | 332 | 403 | 22 | 93 | 5.90e-27 | 103 |
| MS.gene47565.t1 | MTR_6g027390 | 63.333 | 60 | 22 | 0 | 35 | 94 | 24 | 83 | 9.31e-21 | 92.4 |
| MS.gene47565.t1 | MTR_4g088065 | 47.788 | 113 | 44 | 4 | 52 | 163 | 134 | 232 | 5.28e-19 | 86.3 |
| MS.gene47565.t1 | MTR_7g086940 | 60.938 | 64 | 22 | 1 | 29 | 92 | 17 | 77 | 1.19e-18 | 85.9 |
| MS.gene47565.t1 | MTR_4g084550 | 46.269 | 67 | 36 | 0 | 37 | 103 | 58 | 124 | 5.04e-17 | 79.0 |
| MS.gene47565.t1 | MTR_5g081990 | 37.778 | 90 | 50 | 1 | 14 | 103 | 10 | 93 | 1.16e-15 | 75.1 |
| MS.gene47565.t1 | MTR_8g107210 | 49.180 | 61 | 31 | 0 | 43 | 103 | 96 | 156 | 2.18e-15 | 77.4 |
| MS.gene47565.t1 | MTR_1g019130 | 40.230 | 87 | 49 | 1 | 43 | 129 | 90 | 173 | 2.51e-14 | 72.4 |
| MS.gene47565.t1 | MTR_4g063735 | 30.508 | 177 | 91 | 3 | 43 | 189 | 25 | 199 | 2.94e-14 | 72.8 |
| MS.gene47565.t1 | MTR_1g019130 | 40.230 | 87 | 49 | 1 | 43 | 129 | 90 | 173 | 1.35e-13 | 70.5 |
| MS.gene47565.t1 | MTR_3g115620 | 33.010 | 103 | 62 | 1 | 41 | 143 | 80 | 175 | 2.00e-13 | 69.3 |
| MS.gene47565.t1 | MTR_5g021930 | 40.741 | 81 | 46 | 2 | 43 | 122 | 30 | 109 | 6.70e-13 | 69.3 |
| MS.gene47565.t1 | MTR_7g060630 | 43.333 | 60 | 34 | 0 | 43 | 102 | 8 | 67 | 2.34e-12 | 66.2 |
| MS.gene47565.t1 | MTR_0777s0020 | 47.191 | 89 | 44 | 2 | 76 | 163 | 50 | 136 | 1.09e-11 | 62.8 |
| MS.gene47565.t1 | MTR_1g115315 | 41.270 | 63 | 37 | 0 | 40 | 102 | 82 | 144 | 1.11e-11 | 65.1 |
| MS.gene47565.t1 | MTR_1g115315 | 41.270 | 63 | 37 | 0 | 40 | 102 | 82 | 144 | 1.33e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47565.t1 | AT5G45980 | 47.244 | 127 | 51 | 2 | 9 | 119 | 8 | 134 | 3.17e-30 | 119 |
| MS.gene47565.t1 | AT3G03660 | 47.872 | 94 | 39 | 2 | 1 | 94 | 1 | 84 | 8.87e-20 | 89.0 |
| MS.gene47565.t1 | AT3G03660 | 47.872 | 94 | 39 | 2 | 1 | 94 | 1 | 84 | 1.40e-19 | 89.0 |
| MS.gene47565.t1 | AT5G17810 | 66.667 | 54 | 18 | 0 | 41 | 94 | 19 | 72 | 1.66e-19 | 88.2 |
| MS.gene47565.t1 | AT5G17810 | 66.667 | 54 | 18 | 0 | 41 | 94 | 19 | 72 | 1.79e-19 | 88.2 |
| MS.gene47565.t1 | AT5G17810 | 66.667 | 54 | 18 | 0 | 41 | 94 | 19 | 72 | 1.79e-19 | 88.2 |
| MS.gene47565.t1 | AT3G03660 | 47.872 | 94 | 39 | 2 | 1 | 94 | 1 | 84 | 2.43e-19 | 88.2 |
| MS.gene47565.t1 | AT3G03660 | 47.872 | 94 | 39 | 2 | 1 | 94 | 1 | 84 | 3.41e-19 | 88.2 |
| MS.gene47565.t1 | AT3G18010 | 47.541 | 61 | 32 | 0 | 43 | 103 | 76 | 136 | 5.42e-15 | 76.3 |
| MS.gene47565.t1 | AT1G46480 | 47.826 | 69 | 35 | 1 | 35 | 103 | 83 | 150 | 2.53e-14 | 71.6 |
| MS.gene47565.t1 | AT3G11260 | 44.262 | 61 | 34 | 0 | 43 | 103 | 24 | 84 | 6.36e-14 | 70.1 |
| MS.gene47565.t1 | AT5G05770 | 43.333 | 60 | 34 | 0 | 43 | 102 | 29 | 88 | 7.42e-14 | 68.6 |
| MS.gene47565.t1 | AT1G46480 | 47.826 | 69 | 35 | 1 | 35 | 103 | 83 | 150 | 1.13e-13 | 70.9 |
| MS.gene47565.t1 | AT2G17950 | 50.000 | 62 | 30 | 1 | 43 | 103 | 38 | 99 | 1.26e-13 | 71.6 |
| MS.gene47565.t1 | AT2G33880 | 45.333 | 75 | 37 | 1 | 327 | 401 | 309 | 379 | 1.60e-13 | 72.0 |
| MS.gene47565.t1 | AT2G33880 | 44.595 | 74 | 37 | 1 | 327 | 400 | 309 | 378 | 3.50e-13 | 70.9 |
| MS.gene47565.t1 | AT2G01500 | 49.091 | 55 | 28 | 0 | 43 | 97 | 61 | 115 | 5.13e-13 | 69.3 |
| MS.gene47565.t1 | AT5G59340 | 26.776 | 183 | 118 | 5 | 43 | 216 | 14 | 189 | 6.12e-13 | 68.9 |
| MS.gene47565.t1 | AT2G28610 | 42.424 | 66 | 38 | 0 | 37 | 102 | 2 | 67 | 2.06e-12 | 67.0 |
| MS.gene47565.t1 | AT4G35550 | 42.188 | 64 | 37 | 0 | 40 | 103 | 96 | 159 | 3.27e-12 | 67.0 |
| MS.gene47565.t1 | AT1G20700 | 41.270 | 63 | 37 | 0 | 41 | 103 | 31 | 93 | 7.86e-12 | 63.5 |
| MS.gene47565.t1 | AT1G20700 | 36.486 | 74 | 47 | 0 | 30 | 103 | 82 | 155 | 9.61e-12 | 64.7 |
| MS.gene47565.t1 | AT1G20700 | 36.486 | 74 | 47 | 0 | 30 | 103 | 82 | 155 | 1.06e-11 | 64.3 |
Find 109 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGAACAATTAGAAGAATT+TGG | 0.130042 | 4.3:-25373153 | MS.gene47565:CDS |
| TTAGAAGAATTTGGGAAAAT+TGG | 0.179693 | 4.3:-25373144 | MS.gene47565:CDS |
| TTGTGACACCAAAATTAAAT+TGG | 0.211251 | 4.3:+25372509 | None:intergenic |
| AAAGGATTCACGAACGTTAA+AGG | 0.277504 | 4.3:+25372124 | None:intergenic |
| AATAAGTATCATCTTGGTTT+TGG | 0.279397 | 4.3:+25372842 | None:intergenic |
| ATGCGGATTTGCTCAGGCTT+TGG | 0.283372 | 4.3:+25373237 | None:intergenic |
| ATGAACAATGAAAATGAAAA+TGG | 0.285973 | 4.3:-25372616 | MS.gene47565:CDS |
| CACTCTCCCATCATTAATAT+TGG | 0.292661 | 4.3:+25372897 | None:intergenic |
| GCCTGAGCAAATCCGCATTC+TGG | 0.308743 | 4.3:-25373232 | MS.gene47565:CDS |
| TGCGGATTTGCTCAGGCTTT+GGG | 0.308960 | 4.3:+25373238 | None:intergenic |
| TCAACCGGGAAAGAGGAAAA+TGG | 0.310045 | 4.3:+25372778 | None:intergenic |
| TCAGGCTTTGGGTTCCATCT+TGG | 0.322968 | 4.3:+25373249 | None:intergenic |
| GAAGTTGATCATCAGTAAAA+AGG | 0.326950 | 4.3:+25372401 | None:intergenic |
| TTTGGGTTCCATCTTGGCCT+TGG | 0.327019 | 4.3:+25373255 | None:intergenic |
| ATCACAATATCTAACAATAT+TGG | 0.329123 | 4.3:-25372925 | MS.gene47565:CDS |
| TTTCATTGGGAGAGGCTCTT+TGG | 0.330296 | 4.3:+25372947 | None:intergenic |
| TTAGGAGCTGGATCTGCATT+TGG | 0.336689 | 4.3:+25373033 | None:intergenic |
| GGAGAGATTGTGGATGAATT+AGG | 0.338412 | 4.3:+25372868 | None:intergenic |
| GGTGGTGGTGGTGGGATTTG+TGG | 0.341213 | 4.3:+25373000 | None:intergenic |
| GTGGTGGTGGTGGGATTTGT+GGG | 0.343259 | 4.3:+25373001 | None:intergenic |
| TGTGACACCAAAATTAAATT+GGG | 0.351466 | 4.3:+25372510 | None:intergenic |
| GTTAGATATTGTGATTTCAT+TGG | 0.354236 | 4.3:+25372933 | None:intergenic |
| GGTGAGGGTTCAATCATATT+CGG | 0.354951 | 4.3:+25372682 | None:intergenic |
| ATTTGTGGGAGAGAGTTATT+AGG | 0.358733 | 4.3:+25373015 | None:intergenic |
| GTGAACAATTAGAAGAATTT+GGG | 0.359582 | 4.3:-25373152 | MS.gene47565:CDS |
| TTCCATCTTGGCCTTGGTCC+AGG | 0.361114 | 4.3:+25373261 | None:intergenic |
| TGGTTGGAGTTCGACGAATT+TGG | 0.370437 | 4.3:+25373844 | None:intergenic |
| GATGGATTAGGTGGTGGTGG+TGG | 0.376558 | 4.3:+25372991 | None:intergenic |
| AGAGGCTCTTTGGTGATTAG+AGG | 0.377467 | 4.3:+25372957 | None:intergenic |
| TTTACTGATGATCAACTTCA+AGG | 0.378920 | 4.3:-25372397 | MS.gene47565:intron |
| CTGGAAGCAATCTACAACTC+AGG | 0.386585 | 4.3:-25373213 | MS.gene47565:CDS |
| GAAGATGATGAAGATGGATT+AGG | 0.391757 | 4.3:+25372979 | None:intergenic |
| CCCCATTCATCGGTTAGAAC+CGG | 0.398111 | 4.3:+25372065 | None:intergenic |
| CCCGGTTCTAACCGATGAAT+GGG | 0.399463 | 4.3:-25372066 | MS.gene47565:CDS |
| TTAGATATTGTGATTTCATT+GGG | 0.400328 | 4.3:+25372934 | None:intergenic |
| GTTGTAGATCGGTTTCAGTT+GGG | 0.400667 | 4.3:+25372812 | None:intergenic |
| GAAAATGAAGAAAGAAATCC+TGG | 0.401206 | 4.3:-25373279 | MS.gene47565:CDS |
| TCCAGAATGCGGATTTGCTC+AGG | 0.421812 | 4.3:+25373231 | None:intergenic |
| TCATTGATATGATTCTCAAC+CGG | 0.427156 | 4.3:+25372763 | None:intergenic |
| TTTAACGTTCGTGAATCCTT+TGG | 0.434959 | 4.3:-25372122 | MS.gene47565:CDS |
| GGAATCTCCAATATTAATGA+TGG | 0.437319 | 4.3:-25372904 | MS.gene47565:CDS |
| GTGAGGGTTCAATCATATTC+GGG | 0.442014 | 4.3:+25372683 | None:intergenic |
| AAGGATTCACGAACGTTAAA+GGG | 0.443421 | 4.3:+25372125 | None:intergenic |
| ATCTTCTTGATTTCATCTAC+AGG | 0.443482 | 4.3:+25373177 | None:intergenic |
| AAAAGGAATGGAATATCAAC+AGG | 0.453783 | 4.3:+25372418 | None:intergenic |
| CCCCGGTTCTAACCGATGAA+TGG | 0.455370 | 4.3:-25372067 | MS.gene47565:CDS |
| AGTTGTAGATCGGTTTCAGT+TGG | 0.468112 | 4.3:+25372811 | None:intergenic |
| CCCATTCATCGGTTAGAACC+GGG | 0.470305 | 4.3:+25372066 | None:intergenic |
| ATGGATTAGGTGGTGGTGGT+GGG | 0.472541 | 4.3:+25372992 | None:intergenic |
| CAACCGGGAAAGAGGAAAAT+GGG | 0.472584 | 4.3:+25372779 | None:intergenic |
| ATGTCAATGGCCGGAGGTAG+AGG | 0.473475 | 4.3:+25372448 | None:intergenic |
| TGTGAGAATAAGTATCATCT+TGG | 0.474305 | 4.3:+25372836 | None:intergenic |
| GGTGACTTTATAAACTTGCT+TGG | 0.474802 | 4.3:+25373865 | None:intergenic |
| CATTGATATGATTCTCAACC+GGG | 0.490183 | 4.3:+25372764 | None:intergenic |
| TATTGTGATTTCATTGGGAG+AGG | 0.498415 | 4.3:+25372939 | None:intergenic |
| TTGTAGATCGGTTTCAGTTG+GGG | 0.501118 | 4.3:+25372813 | None:intergenic |
| GAAGATGGATTAGGTGGTGG+TGG | 0.501572 | 4.3:+25372988 | None:intergenic |
| GGGTTTAGGTAGTTGTAGAT+CGG | 0.502978 | 4.3:+25372801 | None:intergenic |
| ATGATTCTCAACCGGGAAAG+AGG | 0.506437 | 4.3:+25372771 | None:intergenic |
| CTGAACTTCAGAGGAGGATA+CGG | 0.512954 | 4.3:-25370055 | MS.gene47565:CDS |
| GTTGAGAATCATATCAATGA+AGG | 0.513388 | 4.3:-25372760 | MS.gene47565:CDS |
| GGGAGAGAGTTATTAGGAGC+TGG | 0.513692 | 4.3:+25373021 | None:intergenic |
| ATCCTGGACCAAGGCCAAGA+TGG | 0.528279 | 4.3:-25373263 | MS.gene47565:CDS |
| AACAGGTGCACTCATGTCAA+TGG | 0.531199 | 4.3:+25372435 | None:intergenic |
| GTTAACCTCGATTACTTCGT+TGG | 0.544175 | 4.3:+25372154 | None:intergenic |
| TCCATGGTAGAGTGAGTTGA+GGG | 0.553586 | 4.3:+25372037 | None:intergenic |
| TTCTTGATTTCATCTACAGG+TGG | 0.556034 | 4.3:+25373180 | None:intergenic |
| GAGGGTGACACCCCATTCAT+CGG | 0.558082 | 4.3:+25372055 | None:intergenic |
| TGATCAAGTGAATGTTCAAG+AGG | 0.560823 | 4.3:-25372569 | MS.gene47565:CDS |
| GTTTGACTCCTTCTGTACCC+CGG | 0.561060 | 4.3:-25372084 | MS.gene47565:CDS |
| TTAGAGGAAGATGATGAAGA+TGG | 0.564984 | 4.3:+25372973 | None:intergenic |
| GTGACACCAAAATTAAATTG+GGG | 0.565024 | 4.3:+25372511 | None:intergenic |
| TTGAGAATCATATCAATGAA+GGG | 0.567167 | 4.3:-25372759 | MS.gene47565:CDS |
| AACCATCAAAATCGTCTGCA+TGG | 0.567329 | 4.3:-25373826 | MS.gene47565:intron |
| GAATCTCCAATATTAATGAT+GGG | 0.575519 | 4.3:-25372903 | MS.gene47565:CDS |
| TTGCAGTTGCTGAACTTCAG+AGG | 0.580695 | 4.3:-25370064 | MS.gene47565:intron |
| GGTTAGAACCGGGGTACAGA+AGG | 0.581477 | 4.3:+25372076 | None:intergenic |
| CTCCATGGTAGAGTGAGTTG+AGG | 0.583077 | 4.3:+25372036 | None:intergenic |
| TGATCTTGCTCCTCTACCTC+CGG | 0.584790 | 4.3:-25372458 | MS.gene47565:CDS |
| GGTGCACTCATGTCAATGGC+CGG | 0.585287 | 4.3:+25372439 | None:intergenic |
| TGGAAGCAATCTACAACTCA+GGG | 0.590445 | 4.3:-25373212 | MS.gene47565:CDS |
| ATGTTATCGTAATTAAGCAC+AGG | 0.591556 | 4.3:+25372640 | None:intergenic |
| TTTCAAAACCGCAAGTCCAA+AGG | 0.599228 | 4.3:-25373099 | MS.gene47565:CDS |
| CCACGTAATAATCAGCTCCA+TGG | 0.601206 | 4.3:+25372021 | None:intergenic |
| TGTAGATTGCTTCCAGAATG+CGG | 0.605667 | 4.3:+25373220 | None:intergenic |
| AACTTCAGAGGAGGATACGG+AGG | 0.607611 | 4.3:-25370052 | MS.gene47565:CDS |
| GAAGTAATCGAGGTTAACGC+AGG | 0.607642 | 4.3:-25372149 | MS.gene47565:CDS |
| TACTGCCAACGAAGTAATCG+AGG | 0.608047 | 4.3:-25372159 | MS.gene47565:CDS |
| CAGAACTGCTCTATTACCAA+AGG | 0.619722 | 4.3:+25372106 | None:intergenic |
| AATGACATGACAACACTAGA+GGG | 0.631034 | 4.3:-25372727 | MS.gene47565:CDS |
| GATGATGAAGATGGATTAGG+TGG | 0.643509 | 4.3:+25372982 | None:intergenic |
| TGAGAATCATATCAATGAAG+GGG | 0.645242 | 4.3:-25372758 | MS.gene47565:CDS |
| ACCCTCAACTCACTCTACCA+TGG | 0.647606 | 4.3:-25372038 | MS.gene47565:CDS |
| TAATGACATGACAACACTAG+AGG | 0.647700 | 4.3:-25372728 | MS.gene47565:CDS |
| GATGAAGATGGATTAGGTGG+TGG | 0.649565 | 4.3:+25372985 | None:intergenic |
| CTCGTAAGAAGAAAGTACAT+TGG | 0.652355 | 4.3:-25373888 | MS.gene47565:CDS |
| TGACACCAAAATTAAATTGG+GGG | 0.653699 | 4.3:+25372512 | None:intergenic |
| AACCGGGAAAGAGGAAAATG+GGG | 0.657308 | 4.3:+25372780 | None:intergenic |
| AAGAAAGAAATCCTGGACCA+AGG | 0.658709 | 4.3:-25373272 | MS.gene47565:CDS |
| CAGTTGCTGAACTTCAGAGG+AGG | 0.665330 | 4.3:-25370061 | MS.gene47565:CDS |
| CCATGGAGCTGATTATTACG+TGG | 0.665604 | 4.3:-25372021 | MS.gene47565:intron |
| ACTTCAGAGGAGGATACGGA+GGG | 0.665784 | 4.3:-25370051 | MS.gene47565:CDS |
| AAGTAATCGAGGTTAACGCA+GGG | 0.673390 | 4.3:-25372148 | MS.gene47565:CDS |
| ATGACATGACAACACTAGAG+GGG | 0.676653 | 4.3:-25372726 | MS.gene47565:CDS |
| TATTAATGATGGGAGAGTGT+TGG | 0.676983 | 4.3:-25372893 | MS.gene47565:CDS |
| CCGGTTCTAACCGATGAATG+GGG | 0.682846 | 4.3:-25372065 | MS.gene47565:CDS |
| CCATTCATCGGTTAGAACCG+GGG | 0.687831 | 4.3:+25372067 | None:intergenic |
| GCACTCATGTCAATGGCCGG+AGG | 0.689498 | 4.3:+25372442 | None:intergenic |
| ACCGGGAAAGAGGAAAATGG+GGG | 0.724316 | 4.3:+25372781 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATAATAATAAAATAA+TGG | - | chr4.3:25372285-25372304 | MS.gene47565:intron | 0.0% |
| !! | AAAAATTTACTAAAAAAAAG+AGG | - | chr4.3:25372359-25372378 | MS.gene47565:intron | 10.0% |
| !! | TAATAATAATAAAAAGTAGA+AGG | + | chr4.3:25370166-25370185 | None:intergenic | 10.0% |
| !!! | ATTTCTAAAACTATTTTTTA+TGG | + | chr4.3:25370519-25370538 | None:intergenic | 10.0% |
| !!! | TTATTTTTCATATATAACTA+TGG | - | chr4.3:25372512-25372531 | MS.gene47565:CDS | 10.0% |
| !!! | TTTCTAAAACTATTTTTTAT+GGG | + | chr4.3:25370518-25370537 | None:intergenic | 10.0% |
| !! | AAACATTTCATCAAATATAT+GGG | + | chr4.3:25373064-25373083 | None:intergenic | 15.0% |
| !! | AATTACAAATATAGATGATT+TGG | - | chr4.3:25372014-25372033 | MS.gene47565:intron | 15.0% |
| !! | ATACATATCAATTAATCATT+TGG | - | chr4.3:25372052-25372071 | MS.gene47565:CDS | 15.0% |
| !! | TATATAACTATGGATTTAAT+TGG | - | chr4.3:25372522-25372541 | MS.gene47565:CDS | 15.0% |
| !! | TCCATATTACTATATTTATA+GGG | - | chr4.3:25373675-25373694 | MS.gene47565:intron | 15.0% |
| !!! | AAATAGTTGATTTTAGATTT+AGG | + | chr4.3:25370396-25370415 | None:intergenic | 15.0% |
| !!! | ATTATTTTTTAATTATCCCA+TGG | - | chr4.3:25371611-25371630 | MS.gene47565:intron | 15.0% |
| !!! | ATTTTTTTAAAGCTAAGATT+AGG | + | chr4.3:25370366-25370385 | None:intergenic | 15.0% |
| !!! | CAATATAATTTGTTTTTTTG+CGG | + | chr4.3:25372843-25372862 | None:intergenic | 15.0% |
| !!! | CTTTTTACTAAAAAAGTTAA+AGG | + | chr4.3:25372259-25372278 | None:intergenic | 15.0% |
| !! | AAAAAATATTTACACCCATA+AGG | + | chr4.3:25372552-25372571 | None:intergenic | 20.0% |
| !! | AAACTAAATTCTTTCACATA+TGG | + | chr4.3:25373301-25373320 | None:intergenic | 20.0% |
| !! | AACATTTCATCAAATATATG+GGG | + | chr4.3:25373063-25373082 | None:intergenic | 20.0% |
| !! | ACCCTATAAATATAGTAATA+TGG | + | chr4.3:25373679-25373698 | None:intergenic | 20.0% |
| !! | ATCACAATATCTAACAATAT+TGG | - | chr4.3:25371000-25371019 | MS.gene47565:intron | 20.0% |
| !! | ATGAACAATGAAAATGAAAA+TGG | - | chr4.3:25371309-25371328 | MS.gene47565:intron | 20.0% |
| !! | ATTTAATTGGTATACCTTAT+GGG | - | chr4.3:25372535-25372554 | MS.gene47565:CDS | 20.0% |
| !! | ATTTATGTAATTAATGATCG+TGG | - | chr4.3:25373250-25373269 | MS.gene47565:CDS | 20.0% |
| !! | CAAACATTTCATCAAATATA+TGG | + | chr4.3:25373065-25373084 | None:intergenic | 20.0% |
| !! | CGCAAAAAAACAAATTATAT+TGG | - | chr4.3:25372841-25372860 | MS.gene47565:CDS | 20.0% |
| !! | CTCCATATTACTATATTTAT+AGG | - | chr4.3:25373674-25373693 | MS.gene47565:intron | 20.0% |
| !! | GAAAATGTATAAATTAGGAA+AGG | + | chr4.3:25372808-25372827 | None:intergenic | 20.0% |
| !! | GCTTATAACAAATATTGTTT+AGG | - | chr4.3:25370619-25370638 | MS.gene47565:intron | 20.0% |
| !! | TATAACAAATATTGTTTAGG+TGG | - | chr4.3:25370622-25370641 | MS.gene47565:intron | 20.0% |
| !! | TTAGATATTGTGATTTCATT+GGG | + | chr4.3:25370994-25371013 | None:intergenic | 20.0% |
| !! | TTTGATTAGGTAATGATATT+TGG | - | chr4.3:25372142-25372161 | MS.gene47565:CDS | 20.0% |
| !!! | AACTATTTGATCTTTTCTAA+TGG | - | chr4.3:25370408-25370427 | MS.gene47565:intron | 20.0% |
| !!! | CTTATTTTATTGTCAAAATG+AGG | - | chr4.3:25373479-25373498 | MS.gene47565:intron | 20.0% |
| !!! | TCATAATTTTTCTTTCTTTC+CGG | + | chr4.3:25373228-25373247 | None:intergenic | 20.0% |
| !!! | TTAGTTTTTTTTCCATGTTA+GGG | - | chr4.3:25370288-25370307 | MS.gene47565:intron | 20.0% |
| !!! | TTATTTTGAAAATCACGTAT+AGG | - | chr4.3:25372606-25372625 | MS.gene47565:CDS | 20.0% |
| !!! | TTTAGTTTTTTTTCCATGTT+AGG | - | chr4.3:25370287-25370306 | MS.gene47565:intron | 20.0% |
| ! | AAATAGAGAGATCAATAATG+TGG | + | chr4.3:25372449-25372468 | None:intergenic | 25.0% |
| ! | ATTACCTAATCAAAATGATG+TGG | + | chr4.3:25372136-25372155 | None:intergenic | 25.0% |
| ! | ATTCTTTCACATATGGTAAA+TGG | + | chr4.3:25373294-25373313 | None:intergenic | 25.0% |
| ! | GAATCTCCAATATTAATGAT+GGG | - | chr4.3:25371022-25371041 | MS.gene47565:intron | 25.0% |
| ! | GATTTAATTGGTATACCTTA+TGG | - | chr4.3:25372534-25372553 | MS.gene47565:CDS | 25.0% |
| ! | GGAAAGAAAGAAAAATTATG+AGG | - | chr4.3:25373227-25373246 | MS.gene47565:CDS | 25.0% |
| ! | GTGAACAATTAGAAGAATTT+GGG | - | chr4.3:25370773-25370792 | MS.gene47565:intron | 25.0% |
| ! | GTTAGATATTGTGATTTCAT+TGG | + | chr4.3:25370995-25371014 | None:intergenic | 25.0% |
| ! | TGTGACACCAAAATTAAATT+GGG | + | chr4.3:25371418-25371437 | None:intergenic | 25.0% |
| ! | TTACCTAATCAAAATGATGT+GGG | + | chr4.3:25372135-25372154 | None:intergenic | 25.0% |
| ! | TTAGAAGAATTTGGGAAAAT+TGG | - | chr4.3:25370781-25370800 | MS.gene47565:intron | 25.0% |
| ! | TTGAGAATCATATCAATGAA+GGG | - | chr4.3:25371166-25371185 | MS.gene47565:intron | 25.0% |
| ! | TTGTGACACCAAAATTAAAT+TGG | + | chr4.3:25371419-25371438 | None:intergenic | 25.0% |
| !! | AATAAGTATCATCTTGGTTT+TGG | + | chr4.3:25371086-25371105 | None:intergenic | 25.0% |
| !! | ATTTTATTGTCAAAATGAGG+AGG | - | chr4.3:25373482-25373501 | MS.gene47565:intron | 25.0% |
| !! | TATAACGATTAGTTGATGTT+TGG | - | chr4.3:25371696-25371715 | MS.gene47565:intron | 25.0% |
| !!! | AATGAGTGTTGAAGAATTAA+TGG | + | chr4.3:25372171-25372190 | None:intergenic | 25.0% |
| !!! | ATGTGGGAACTTTTTTTATA+AGG | + | chr4.3:25372119-25372138 | None:intergenic | 25.0% |
| !!! | CATCTTTTGATCATTTTTAG+AGG | + | chr4.3:25372234-25372253 | None:intergenic | 25.0% |
| !!! | TAGTTTTTTTTCCATGTTAG+GGG | - | chr4.3:25370289-25370308 | MS.gene47565:intron | 25.0% |
| !!! | TCGATATAATTTGTTTCGAT+TGG | + | chr4.3:25370267-25370286 | None:intergenic | 25.0% |
| !!! | TGTGGGAACTTTTTTTATAA+GGG | + | chr4.3:25372118-25372137 | None:intergenic | 25.0% |
| AAAAAGTAGAAGGAGTTGTT+TGG | + | chr4.3:25370156-25370175 | None:intergenic | 30.0% | |
| AAAAGGAATGGAATATCAAC+AGG | + | chr4.3:25371510-25371529 | None:intergenic | 30.0% | |
| ATCTTCTTGATTTCATCTAC+AGG | + | chr4.3:25370751-25370770 | None:intergenic | 30.0% | |
| ATGCTGATAACTCAATTGTA+AGG | + | chr4.3:25373154-25373173 | None:intergenic | 30.0% | |
| ATGTTATCGTAATTAAGCAC+AGG | + | chr4.3:25371288-25371307 | None:intergenic | 30.0% | |
| CACTTGATCAAAAAGATCAT+TGG | + | chr4.3:25371346-25371365 | None:intergenic | 30.0% | |
| CGTGAACAATTAGAAGAATT+TGG | - | chr4.3:25370772-25370791 | MS.gene47565:intron | 30.0% | |
| CTAATATAGATCAAGTCCAA+TGG | + | chr4.3:25372390-25372409 | None:intergenic | 30.0% | |
| GAAAATGAAGAAAGAAATCC+TGG | - | chr4.3:25370646-25370665 | MS.gene47565:intron | 30.0% | |
| GAGGGGAAAATGTATAAATT+AGG | + | chr4.3:25372813-25372832 | None:intergenic | 30.0% | |
| GGAATCTCCAATATTAATGA+TGG | - | chr4.3:25371021-25371040 | MS.gene47565:intron | 30.0% | |
| GTAAACTTTGCATGTTTGAT+CGG | - | chr4.3:25370597-25370616 | MS.gene47565:intron | 30.0% | |
| GTGACACCAAAATTAAATTG+GGG | + | chr4.3:25371417-25371436 | None:intergenic | 30.0% | |
| GTTGAGAATCATATCAATGA+AGG | - | chr4.3:25371165-25371184 | MS.gene47565:intron | 30.0% | |
| TAGTAGAGATCATGTTTGTT+TGG | + | chr4.3:25370333-25370352 | None:intergenic | 30.0% | |
| TCATTGATATGATTCTCAAC+CGG | + | chr4.3:25371165-25371184 | None:intergenic | 30.0% | |
| TGACACCAAAATTAAATTGG+GGG | + | chr4.3:25371416-25371435 | None:intergenic | 30.0% | |
| TGAGAATCATATCAATGAAG+GGG | - | chr4.3:25371167-25371186 | MS.gene47565:intron | 30.0% | |
| TGATCATCAGTAAAAAGGAA+TGG | + | chr4.3:25371522-25371541 | None:intergenic | 30.0% | |
| TGTGAGAATAAGTATCATCT+TGG | + | chr4.3:25371092-25371111 | None:intergenic | 30.0% | |
| TGTTAGCTCATTTCAACTAT+AGG | + | chr4.3:25373205-25373224 | None:intergenic | 30.0% | |
| TTAGGATTTCAATGCAAGTA+AGG | - | chr4.3:25370460-25370479 | MS.gene47565:intron | 30.0% | |
| TTGCTTGAATGTGTGAATTT+AGG | + | chr4.3:25370489-25370508 | None:intergenic | 30.0% | |
| TTTACTGATGATCAACTTCA+AGG | - | chr4.3:25371528-25371547 | MS.gene47565:intron | 30.0% | |
| ! | ACTATATACGCACAATCTTT+TGG | - | chr4.3:25372694-25372713 | MS.gene47565:CDS | 30.0% |
| ! | CTTTTTGTACGTGTCTAATA+TGG | - | chr4.3:25372207-25372226 | MS.gene47565:intron | 30.0% |
| ! | GAAGTTGATCATCAGTAAAA+AGG | + | chr4.3:25371527-25371546 | None:intergenic | 30.0% |
| !! | AAGAATTTAGTTTGCGTGTT+AGG | - | chr4.3:25373308-25373327 | MS.gene47565:intron | 30.0% |
| !! | GTGTATTGATAGCATGTTTT+CGG | - | chr4.3:25373377-25373396 | MS.gene47565:intron | 30.0% |
| !!! | GCATTACTGTTTTTTCAAAC+TGG | - | chr4.3:25372913-25372932 | MS.gene47565:CDS | 30.0% |
| !!! | GCGTGTTTTTGAAACAATTT+TGG | - | chr4.3:25373648-25373667 | MS.gene47565:intron | 30.0% |
| !!! | GGTTGTCTTTTTGATTTCTT+GGG | + | chr4.3:25370874-25370893 | None:intergenic | 30.0% |
| !!! | GTTGTCTTTTTGATTTCTTG+GGG | + | chr4.3:25370873-25370892 | None:intergenic | 30.0% |
| !!! | TAGACACGCATTTTTTTCAA+GGG | - | chr4.3:25372720-25372739 | MS.gene47565:CDS | 30.0% |
| !!! | TGCTTTTTTGTTTTTGCCTT+TGG | + | chr4.3:25370845-25370864 | None:intergenic | 30.0% |
| !!! | TGGTTGTCTTTTTGATTTCT+TGG | + | chr4.3:25370875-25370894 | None:intergenic | 30.0% |
| !!! | TTAGTTGATGTTTGGTTTTC+AGG | - | chr4.3:25371704-25371723 | MS.gene47565:intron | 30.0% |
| !!! | TTGGTTTGTTAATGCACTTT+TGG | - | chr4.3:25373340-25373359 | MS.gene47565:intron | 30.0% |
| !!! | TTTTTTTGCGGAATTCAAGA+GGG | + | chr4.3:25372831-25372850 | None:intergenic | 30.0% |
| AAAAAAAGAGGATCCACCAT+TGG | - | chr4.3:25372371-25372390 | MS.gene47565:intron | 35.0% | |
| AAAGGATTCACGAACGTTAA+AGG | + | chr4.3:25371804-25371823 | None:intergenic | 35.0% | |
| AAATCTGATCGTGAACTTCT+CGG | - | chr4.3:25372867-25372886 | MS.gene47565:CDS | 35.0% | |
| AAGGATTCACGAACGTTAAA+GGG | + | chr4.3:25371803-25371822 | None:intergenic | 35.0% | |
| AATGACATGACAACACTAGA+GGG | - | chr4.3:25371198-25371217 | MS.gene47565:intron | 35.0% | |
| ACAATTGAGTTATCAGCATG+CGG | - | chr4.3:25373155-25373174 | MS.gene47565:CDS | 35.0% | |
| ACCCAAAATTTCAAGCACAA+GGG | - | chr4.3:25371584-25371603 | MS.gene47565:intron | 35.0% | |
| ATATAGATCAAGTCCAATGG+TGG | + | chr4.3:25372387-25372406 | None:intergenic | 35.0% | |
| ATTTGTGGGAGAGAGTTATT+AGG | + | chr4.3:25370913-25370932 | None:intergenic | 35.0% | |
| CACTCTCCCATCATTAATAT+TGG | + | chr4.3:25371031-25371050 | None:intergenic | 35.0% | |
| CATTGATATGATTCTCAACC+GGG | + | chr4.3:25371164-25371183 | None:intergenic | 35.0% | |
| GAATGATATTTGTGCGTTCA+TGG | - | chr4.3:25372488-25372507 | MS.gene47565:CDS | 35.0% | |
| GATGAAATGTTTGAGAGTGA+TGG | - | chr4.3:25373072-25373091 | MS.gene47565:CDS | 35.0% | |
| TAATGACATGACAACACTAG+AGG | - | chr4.3:25371197-25371216 | MS.gene47565:intron | 35.0% | |
| TAGTTGAAATGAGCTAACAC+CGG | - | chr4.3:25373206-25373225 | MS.gene47565:CDS | 35.0% | |
| TATTGTGATTTCATTGGGAG+AGG | + | chr4.3:25370989-25371008 | None:intergenic | 35.0% | |
| TCAAAATGAGGAGGAGATAA+TGG | - | chr4.3:25373491-25373510 | MS.gene47565:intron | 35.0% | |
| TGAGTAAACAACGTTTGCTT+AGG | - | chr4.3:25371988-25372007 | MS.gene47565:intron | 35.0% | |
| TGATCAAGTGAATGTTCAAG+AGG | - | chr4.3:25371356-25371375 | MS.gene47565:intron | 35.0% | |
| TGTGAAGTGATAGCAAAAGA+GGG | + | chr4.3:25372419-25372438 | None:intergenic | 35.0% | |
| TGTTGAAGTCTATCTTGAAG+AGG | - | chr4.3:25373761-25373780 | MS.gene47565:intron | 35.0% | |
| TGTTTATATGTCCCCTAACA+TGG | + | chr4.3:25370303-25370322 | None:intergenic | 35.0% | |
| TTAGAGGAAGATGATGAAGA+TGG | + | chr4.3:25370955-25370974 | None:intergenic | 35.0% | |
| TTCTTGATTTCATCTACAGG+TGG | + | chr4.3:25370748-25370767 | None:intergenic | 35.0% | |
| TTGCTTGACGGTGTAAATTT+AGG | - | chr4.3:25370442-25370461 | MS.gene47565:intron | 35.0% | |
| TTTAACGTTCGTGAATCCTT+TGG | - | chr4.3:25371803-25371822 | MS.gene47565:intron | 35.0% | |
| TTTACACCGTCAAGCAAATA+TGG | + | chr4.3:25370439-25370458 | None:intergenic | 35.0% | |
| ! | AATTAAATTGGGGGTCTTGT+TGG | + | chr4.3:25371407-25371426 | None:intergenic | 35.0% |
| ! | ACCCTTGTGCTTGAAATTTT+GGG | + | chr4.3:25371588-25371607 | None:intergenic | 35.0% |
| ! | ATAAATTAGGAAAGGCATGC+AGG | + | chr4.3:25372800-25372819 | None:intergenic | 35.0% |
| ! | ATCAACATTTTGTTGAGGTG+AGG | + | chr4.3:25371262-25371281 | None:intergenic | 35.0% |
| ! | CTCGTAAGAAGAAAGTACAT+TGG | - | chr4.3:25370037-25370056 | MS.gene47565:CDS | 35.0% |
| ! | GAAGATGATGAAGATGGATT+AGG | + | chr4.3:25370949-25370968 | None:intergenic | 35.0% |
| ! | GGAAGATCAACATTTTGTTG+AGG | + | chr4.3:25371267-25371286 | None:intergenic | 35.0% |
| ! | GGTGACTTTATAAACTTGCT+TGG | + | chr4.3:25370063-25370082 | None:intergenic | 35.0% |
| ! | TAAATTAGGAAAGGCATGCA+GGG | + | chr4.3:25372799-25372818 | None:intergenic | 35.0% |
| ! | TACCCTTGTGCTTGAAATTT+TGG | + | chr4.3:25371589-25371608 | None:intergenic | 35.0% |
| ! | TATTAATGATGGGAGAGTGT+TGG | - | chr4.3:25371032-25371051 | MS.gene47565:intron | 35.0% |
| ! | TCAACATTTTGTTGAGGTGA+GGG | + | chr4.3:25371261-25371280 | None:intergenic | 35.0% |
| ! | TGTTTTCGGCTTTCAAAATG+TGG | - | chr4.3:25373391-25373410 | MS.gene47565:intron | 35.0% |
| !! | CAAGACCCCCAATTTAATTT+TGG | - | chr4.3:25371408-25371427 | MS.gene47565:intron | 35.0% |
| !!! | CTAGACACGCATTTTTTTCA+AGG | - | chr4.3:25372719-25372738 | MS.gene47565:CDS | 35.0% |
| !!! | CTTTTTGATTTCTTGGGGTA+GGG | + | chr4.3:25370868-25370887 | None:intergenic | 35.0% |
| !!! | GATGTTTGGTTTTCAGGTTT+TGG | - | chr4.3:25371710-25371729 | MS.gene47565:intron | 35.0% |
| !!! | GTATCATCTTGGTTTTGGTT+CGG | + | chr4.3:25371081-25371100 | None:intergenic | 35.0% |
| !!! | GTTCCCACATCATTTTGATT+AGG | - | chr4.3:25372129-25372148 | MS.gene47565:CDS | 35.0% |
| !!! | GTTTTTTTGCGGAATTCAAG+AGG | + | chr4.3:25372832-25372851 | None:intergenic | 35.0% |
| !!! | TCTTTTTGATTTCTTGGGGT+AGG | + | chr4.3:25370869-25370888 | None:intergenic | 35.0% |
| !!! | TTTTTTGCGGAATTCAAGAG+GGG | + | chr4.3:25372830-25372849 | None:intergenic | 35.0% |
| AAACCATTGAAGAGAGAGGA+GGG | + | chr4.3:25370133-25370152 | None:intergenic | 40.0% | |
| AAAGAGGAAAATGGGGGTTT+AGG | + | chr4.3:25371141-25371160 | None:intergenic | 40.0% | |
| AACCATCAAAATCGTCTGCA+TGG | - | chr4.3:25370099-25370118 | MS.gene47565:intron | 40.0% | |
| AAGAAAGAAATCCTGGACCA+AGG | - | chr4.3:25370653-25370672 | MS.gene47565:intron | 40.0% | |
| AAGTAATCGAGGTTAACGCA+GGG | - | chr4.3:25371777-25371796 | MS.gene47565:intron | 40.0% | |
| AATCTGATCGTGAACTTCTC+GGG | - | chr4.3:25372868-25372887 | MS.gene47565:CDS | 40.0% | |
| ATGACATGACAACACTAGAG+GGG | - | chr4.3:25371199-25371218 | MS.gene47565:intron | 40.0% | |
| CACCCAAAATTTCAAGCACA+AGG | - | chr4.3:25371583-25371602 | MS.gene47565:intron | 40.0% | |
| CAGAACTGCTCTATTACCAA+AGG | + | chr4.3:25371822-25371841 | None:intergenic | 40.0% | |
| GCGTGTTAGGATTAAGAGTT+TGG | - | chr4.3:25373321-25373340 | MS.gene47565:intron | 40.0% | |
| GGAGAGATTGTGGATGAATT+AGG | + | chr4.3:25371060-25371079 | None:intergenic | 40.0% | |
| GGGTTTAGGTAGTTGTAGAT+CGG | + | chr4.3:25371127-25371146 | None:intergenic | 40.0% | |
| GGTGAGGGTTCAATCATATT+CGG | + | chr4.3:25371246-25371265 | None:intergenic | 40.0% | |
| GTCTGACCATATTTGCTTGA+CGG | - | chr4.3:25370430-25370449 | MS.gene47565:intron | 40.0% | |
| GTGAAGTGATAGCAAAAGAG+GGG | + | chr4.3:25372418-25372437 | None:intergenic | 40.0% | |
| GTGAGGGTTCAATCATATTC+GGG | + | chr4.3:25371245-25371264 | None:intergenic | 40.0% | |
| GTGTGAAGTGATAGCAAAAG+AGG | + | chr4.3:25372420-25372439 | None:intergenic | 40.0% | |
| GTTAACCTCGATTACTTCGT+TGG | + | chr4.3:25371774-25371793 | None:intergenic | 40.0% | |
| TCTTCATCGTTGCTGTATGA+AGG | + | chr4.3:25373821-25373840 | None:intergenic | 40.0% | |
| TGAAGTGATAGCAAAAGAGG+GGG | + | chr4.3:25372417-25372436 | None:intergenic | 40.0% | |
| TGCAATATCATCATTGTCGC+TGG | + | chr4.3:25373846-25373865 | None:intergenic | 40.0% | |
| TGGAAGCAATCTACAACTCA+GGG | - | chr4.3:25370713-25370732 | MS.gene47565:intron | 40.0% | |
| TGTAGATTGCTTCCAGAATG+CGG | + | chr4.3:25370708-25370727 | None:intergenic | 40.0% | |
| TTATCAGCATGCGGTTGAAT+TGG | - | chr4.3:25373164-25373183 | MS.gene47565:CDS | 40.0% | |
| TTCGGCTTTCAAAATGTGGA+CGG | - | chr4.3:25373395-25373414 | MS.gene47565:intron | 40.0% | |
| TTGGAAACCATTGAAGAGAG+AGG | + | chr4.3:25370137-25370156 | None:intergenic | 40.0% | |
| TTTCAAAACCGCAAGTCCAA+AGG | - | chr4.3:25370826-25370845 | MS.gene47565:intron | 40.0% | |
| ! | AGTTGTAGATCGGTTTCAGT+TGG | + | chr4.3:25371117-25371136 | None:intergenic | 40.0% |
| ! | GTGATTCGAGTGTCTTTTAC+TGG | - | chr4.3:25370803-25370822 | MS.gene47565:intron | 40.0% |
| ! | GTTGTAGATCGGTTTCAGTT+GGG | + | chr4.3:25371116-25371135 | None:intergenic | 40.0% |
| ! | TACCATGCAGACGATTTTGA+TGG | + | chr4.3:25370104-25370123 | None:intergenic | 40.0% |
| ! | TTGTAGATCGGTTTCAGTTG+GGG | + | chr4.3:25371115-25371134 | None:intergenic | 40.0% |
| !! | ATGAGGAGGAGATAATGGAA+CGG | - | chr4.3:25373496-25373515 | MS.gene47565:intron | 40.0% |
| !! | ATGCAGACGATTTTGATGGT+TGG | + | chr4.3:25370100-25370119 | None:intergenic | 40.0% |
| !! | GATGATGAAGATGGATTAGG+TGG | + | chr4.3:25370946-25370965 | None:intergenic | 40.0% |
| !! | TGTTTTTGCCTTTGGACTTG+CGG | + | chr4.3:25370837-25370856 | None:intergenic | 40.0% |
| !!! | TTGGTTTTCAGGTTTTGGTG+AGG | - | chr4.3:25371715-25371734 | MS.gene47565:intron | 40.0% |
| AACAGGTGCACTCATGTCAA+TGG | + | chr4.3:25371493-25371512 | None:intergenic | 45.0% | |
| AACCATTGAAGAGAGAGGAG+GGG | + | chr4.3:25370132-25370151 | None:intergenic | 45.0% | |
| AACCGGGAAAGAGGAAAATG+GGG | + | chr4.3:25371148-25371167 | None:intergenic | 45.0% | |
| ATGATTCTCAACCGGGAAAG+AGG | + | chr4.3:25371157-25371176 | None:intergenic | 45.0% | |
| CAACCGGGAAAGAGGAAAAT+GGG | + | chr4.3:25371149-25371168 | None:intergenic | 45.0% | |
| CCACGTAATAATCAGCTCCA+TGG | + | chr4.3:25371907-25371926 | None:intergenic | 45.0% | |
| CCATGGAGCTGATTATTACG+TGG | - | chr4.3:25371904-25371923 | MS.gene47565:intron | 45.0% | |
| CTGAACTTCAGAGGAGGATA+CGG | - | chr4.3:25373870-25373889 | MS.gene47565:CDS | 45.0% | |
| CTGGAAGCAATCTACAACTC+AGG | - | chr4.3:25370712-25370731 | MS.gene47565:intron | 45.0% | |
| GAAACCATTGAAGAGAGAGG+AGG | + | chr4.3:25370134-25370153 | None:intergenic | 45.0% | |
| GAAGTAATCGAGGTTAACGC+AGG | - | chr4.3:25371776-25371795 | MS.gene47565:intron | 45.0% | |
| TACTGCCAACGAAGTAATCG+AGG | - | chr4.3:25371766-25371785 | MS.gene47565:intron | 45.0% | |
| TCAACCGGGAAAGAGGAAAA+TGG | + | chr4.3:25371150-25371169 | None:intergenic | 45.0% | |
| TCGGCTTTCAAAATGTGGAC+GGG | - | chr4.3:25373396-25373415 | MS.gene47565:intron | 45.0% | |
| TGGTTGGAGTTCGACGAATT+TGG | + | chr4.3:25370084-25370103 | None:intergenic | 45.0% | |
| TTAGGAGCTGGATCTGCATT+TGG | + | chr4.3:25370895-25370914 | None:intergenic | 45.0% | |
| TTGCAGTTGCTGAACTTCAG+AGG | - | chr4.3:25373861-25373880 | MS.gene47565:CDS | 45.0% | |
| TTTCATTGGGAGAGGCTCTT+TGG | + | chr4.3:25370981-25371000 | None:intergenic | 45.0% | |
| ! | AGAGGCTCTTTGGTGATTAG+AGG | + | chr4.3:25370971-25370990 | None:intergenic | 45.0% |
| ! | TCCATGGTAGAGTGAGTTGA+GGG | + | chr4.3:25371891-25371910 | None:intergenic | 45.0% |
| !! | AGGAGATAATGGAACGGCTA+GGG | - | chr4.3:25373502-25373521 | MS.gene47565:intron | 45.0% |
| !! | GATGAAGATGGATTAGGTGG+TGG | + | chr4.3:25370943-25370962 | None:intergenic | 45.0% |
| !! | TCAGGTTTTGGTGAGGAAGA+TGG | - | chr4.3:25371722-25371741 | MS.gene47565:intron | 45.0% |
| !!! | GTTTTGGTTCGGAGAGATTG+TGG | + | chr4.3:25371070-25371089 | None:intergenic | 45.0% |
| AACCCCTCCTCTCTCTTCAA+TGG | - | chr4.3:25370127-25370146 | MS.gene47565:intron | 50.0% | |
| AACTTCAGAGGAGGATACGG+AGG | - | chr4.3:25373873-25373892 | MS.gene47565:CDS | 50.0% | |
| ACCCTCAACTCACTCTACCA+TGG | - | chr4.3:25371887-25371906 | MS.gene47565:intron | 50.0% | |
| ACCGGGAAAGAGGAAAATGG+GGG | + | chr4.3:25371147-25371166 | None:intergenic | 50.0% | |
| ACTTCAGAGGAGGATACGGA+GGG | - | chr4.3:25373874-25373893 | MS.gene47565:CDS | 50.0% | |
| ATGCACATTGCACACGTCCA+TGG | + | chr4.3:25371631-25371650 | None:intergenic | 50.0% | |
| ATGGACGTGTGCAATGTGCA+TGG | - | chr4.3:25371630-25371649 | MS.gene47565:intron | 50.0% | |
| CAGTTGCTGAACTTCAGAGG+AGG | - | chr4.3:25373864-25373883 | MS.gene47565:CDS | 50.0% | |
| CTCCATGGTAGAGTGAGTTG+AGG | + | chr4.3:25371892-25371911 | None:intergenic | 50.0% | |
| GGGAGAGAGTTATTAGGAGC+TGG | + | chr4.3:25370907-25370926 | None:intergenic | 50.0% | |
| GTTTGACTCCTTCTGTACCC+CGG | - | chr4.3:25371841-25371860 | MS.gene47565:intron | 50.0% | |
| TGATCTTGCTCCTCTACCTC+CGG | - | chr4.3:25371467-25371486 | MS.gene47565:intron | 50.0% | |
| TGCACATTGCACACGTCCAT+GGG | + | chr4.3:25371630-25371649 | None:intergenic | 50.0% | |
| ! | ACCCCCATTTTCCTCTTTCC+CGG | - | chr4.3:25371143-25371162 | MS.gene47565:intron | 50.0% |
| ! | ATGCGGATTTGCTCAGGCTT+TGG | + | chr4.3:25370691-25370710 | None:intergenic | 50.0% |
| ! | CCATTCATCGGTTAGAACCG+GGG | + | chr4.3:25371861-25371880 | None:intergenic | 50.0% |
| ! | CCCATTCATCGGTTAGAACC+GGG | + | chr4.3:25371862-25371881 | None:intergenic | 50.0% |
| ! | CCCCATTCATCGGTTAGAAC+CGG | + | chr4.3:25371863-25371882 | None:intergenic | 50.0% |
| ! | CCCGGTTCTAACCGATGAAT+GGG | - | chr4.3:25371859-25371878 | MS.gene47565:intron | 50.0% |
| ! | CCGGTTCTAACCGATGAATG+GGG | - | chr4.3:25371860-25371879 | MS.gene47565:intron | 50.0% |
| ! | TCCAGAATGCGGATTTGCTC+AGG | + | chr4.3:25370697-25370716 | None:intergenic | 50.0% |
| ! | TGCGGATTTGCTCAGGCTTT+GGG | + | chr4.3:25370690-25370709 | None:intergenic | 50.0% |
| ! | TTTGGGTTCCATCTTGGCCT+TGG | + | chr4.3:25370673-25370692 | None:intergenic | 50.0% |
| !! | ATGGATTAGGTGGTGGTGGT+GGG | + | chr4.3:25370936-25370955 | None:intergenic | 50.0% |
| !! | GAAGATGGATTAGGTGGTGG+TGG | + | chr4.3:25370940-25370959 | None:intergenic | 50.0% |
| !! | GAGGAGATAATGGAACGGCT+AGG | - | chr4.3:25373501-25373520 | MS.gene47565:intron | 50.0% |
| !! | TCAGGCTTTGGGTTCCATCT+TGG | + | chr4.3:25370679-25370698 | None:intergenic | 50.0% |
| ATCCTGGACCAAGGCCAAGA+TGG | - | chr4.3:25370662-25370681 | MS.gene47565:intron | 55.0% | |
| ATGTCAATGGCCGGAGGTAG+AGG | + | chr4.3:25371480-25371499 | None:intergenic | 55.0% | |
| GAGGGTGACACCCCATTCAT+CGG | + | chr4.3:25371873-25371892 | None:intergenic | 55.0% | |
| GCCTGAGCAAATCCGCATTC+TGG | - | chr4.3:25370693-25370712 | MS.gene47565:intron | 55.0% | |
| GGTGCACTCATGTCAATGGC+CGG | + | chr4.3:25371489-25371508 | None:intergenic | 55.0% | |
| GGTTAGAACCGGGGTACAGA+AGG | + | chr4.3:25371852-25371871 | None:intergenic | 55.0% | |
| ! | CCCCGGTTCTAACCGATGAA+TGG | - | chr4.3:25371858-25371877 | MS.gene47565:intron | 55.0% |
| !! | GATGGATTAGGTGGTGGTGG+TGG | + | chr4.3:25370937-25370956 | None:intergenic | 55.0% |
| !! | GTGGTGGTGGTGGGATTTGT+GGG | + | chr4.3:25370927-25370946 | None:intergenic | 55.0% |
| !! | TTCCATCTTGGCCTTGGTCC+AGG | + | chr4.3:25370667-25370686 | None:intergenic | 55.0% |
| GCACTCATGTCAATGGCCGG+AGG | + | chr4.3:25371486-25371505 | None:intergenic | 60.0% | |
| !! | GGTGGTGGTGGTGGGATTTG+TGG | + | chr4.3:25370928-25370947 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 25370033 | 25373914 | 25370033 | ID=MS.gene47565 |
| chr4.3 | mRNA | 25370033 | 25373914 | 25370033 | ID=MS.gene47565.t1;Parent=MS.gene47565 |
| chr4.3 | exon | 25373827 | 25373914 | 25373827 | ID=MS.gene47565.t1.exon1;Parent=MS.gene47565.t1 |
| chr4.3 | CDS | 25373827 | 25373914 | 25373827 | ID=cds.MS.gene47565.t1;Parent=MS.gene47565.t1 |
| chr4.3 | exon | 25372398 | 25373306 | 25372398 | ID=MS.gene47565.t1.exon2;Parent=MS.gene47565.t1 |
| chr4.3 | CDS | 25372398 | 25373306 | 25372398 | ID=cds.MS.gene47565.t1;Parent=MS.gene47565.t1 |
| chr4.3 | exon | 25372022 | 25372221 | 25372022 | ID=MS.gene47565.t1.exon3;Parent=MS.gene47565.t1 |
| chr4.3 | CDS | 25372022 | 25372221 | 25372022 | ID=cds.MS.gene47565.t1;Parent=MS.gene47565.t1 |
| chr4.3 | exon | 25370033 | 25370080 | 25370033 | ID=MS.gene47565.t1.exon4;Parent=MS.gene47565.t1 |
| chr4.3 | CDS | 25370033 | 25370080 | 25370033 | ID=cds.MS.gene47565.t1;Parent=MS.gene47565.t1 |
| Gene Sequence |
| Protein sequence |
