Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47572.t1 | XP_013456921.1 | 98.9 | 476 | 5 | 0 | 2 | 477 | 1 | 476 | 1.90E-279 | 971.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47572.t1 | Q9SGQ0 | 69.6 | 493 | 123 | 7 | 1 | 475 | 1 | 484 | 3.7e-191 | 669.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47572.t1 | A0A072UMQ9 | 98.9 | 476 | 5 | 0 | 2 | 477 | 1 | 476 | 1.4e-279 | 971.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene47572.t1 | TF | VOZ |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47572.t1 | MTR_4g088125 | 98.950 | 476 | 5 | 0 | 2 | 477 | 1 | 476 | 0.0 | 983 |
| MS.gene47572.t1 | MTR_4g079240 | 47.525 | 505 | 195 | 10 | 1 | 439 | 1 | 501 | 9.62e-144 | 421 |
| MS.gene47572.t1 | MTR_2g014870 | 75.200 | 125 | 28 | 2 | 6 | 127 | 3 | 127 | 3.83e-56 | 183 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47572.t1 | AT1G28520 | 69.980 | 493 | 121 | 7 | 1 | 475 | 1 | 484 | 0.0 | 684 |
| MS.gene47572.t1 | AT1G28520 | 69.980 | 493 | 121 | 7 | 1 | 475 | 1 | 484 | 0.0 | 684 |
| MS.gene47572.t1 | AT1G28520 | 69.980 | 493 | 121 | 7 | 1 | 475 | 1 | 484 | 0.0 | 684 |
| MS.gene47572.t1 | AT1G28520 | 69.980 | 493 | 121 | 7 | 1 | 475 | 1 | 484 | 0.0 | 684 |
| MS.gene47572.t1 | AT1G28520 | 67.343 | 493 | 118 | 8 | 1 | 475 | 1 | 468 | 0.0 | 644 |
| MS.gene47572.t1 | AT2G42400 | 49.436 | 443 | 182 | 10 | 22 | 430 | 14 | 448 | 1.83e-128 | 380 |
Find 130 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTCCTCCTTCTGCTTTCT+TGG | 0.101987 | 4.3:+25330214 | MS.gene47572:CDS |
| GTTGCTGCTCCCTCACATTC+TGG | 0.148081 | 4.3:-25330446 | None:intergenic |
| AAGCAAGTTATCAATGAATT+TGG | 0.192112 | 4.3:+25330750 | MS.gene47572:CDS |
| GAGAACACGGGCGACTATTA+TGG | 0.245346 | 4.3:+25331131 | MS.gene47572:CDS |
| CGTAAAGGTGCCATTCAAAA+TGG | 0.269912 | 4.3:-25330815 | None:intergenic |
| CTAAATGGAACATATGAATA+TGG | 0.273129 | 4.3:+25331080 | MS.gene47572:CDS |
| CTTTAGTTCTAAACGGTATA+AGG | 0.278335 | 4.3:-25330868 | None:intergenic |
| CAGTCCCAAAGTGCACATTT+TGG | 0.278981 | 4.3:-25330239 | None:intergenic |
| TTCTCGAGGGCGAGACTATT+AGG | 0.284323 | 4.3:+25330625 | MS.gene47572:CDS |
| CCTCCTCCTTCTGCTTTCTT+GGG | 0.294484 | 4.3:+25330215 | MS.gene47572:CDS |
| TCAGGCTTAGGTGCAGTTAA+TGG | 0.307307 | 4.3:-25327675 | None:intergenic |
| TGATCTGCAGCTGATGTTCC+TGG | 0.313776 | 4.3:+25327249 | MS.gene47572:CDS |
| GCCAACTTTGGCATTGATCT+TGG | 0.322951 | 4.3:-25331018 | None:intergenic |
| ATCATTTGTTATTCTTGCCT+TGG | 0.335227 | 4.3:-25330913 | None:intergenic |
| ATTGATCTTGGCTCTGCCTT+TGG | 0.340387 | 4.3:-25331006 | None:intergenic |
| TCTGAAGAGATCCTATTATA+TGG | 0.344078 | 4.3:+25330776 | MS.gene47572:CDS |
| AATTTATATGCTGGTTTCAA+TGG | 0.345408 | 4.3:+25330131 | MS.gene47572:CDS |
| TATTCATATGTTCCATTTAG+TGG | 0.352586 | 4.3:-25331077 | None:intergenic |
| CCACTTTCAAATGCTCTTCG+AGG | 0.358784 | 4.3:-25330669 | None:intergenic |
| TCCAACCCTTGTGCGGGTCT+TGG | 0.359244 | 4.3:-25330263 | None:intergenic |
| GGGCCCAAAATGTGCACTTT+GGG | 0.366259 | 4.3:+25330235 | MS.gene47572:CDS |
| ATCTTGGCTCTGCCTTTGGC+AGG | 0.367430 | 4.3:-25331002 | None:intergenic |
| TTAGAACTAAAGCTTGTTGA+TGG | 0.379159 | 4.3:+25330879 | MS.gene47572:CDS |
| TGAATTCAGGGTGGAAGTCT+TGG | 0.379269 | 4.3:+25327588 | MS.gene47572:intron |
| CGTAGAACTGGGGCCATGCC+TGG | 0.380276 | 4.3:-25330344 | None:intergenic |
| AGGCTGTGGATCCATATAAT+AGG | 0.383713 | 4.3:-25330787 | None:intergenic |
| TTGCTGCTCCCTCACATTCT+GGG | 0.388280 | 4.3:-25330445 | None:intergenic |
| GCCTGCAGAGCCTGGTCGTT+AGG | 0.397299 | 4.3:-25327699 | None:intergenic |
| AACGACCAGGCTCTGCAGGC+TGG | 0.398000 | 4.3:+25327702 | MS.gene47572:CDS |
| ACGACCAGGCTCTGCAGGCT+GGG | 0.402119 | 4.3:+25327703 | MS.gene47572:CDS |
| CTGCAAAAGCCGACAGATAT+CGG | 0.402396 | 4.3:-25327622 | None:intergenic |
| TCTCGAGGGCGAGACTATTA+GGG | 0.404083 | 4.3:+25330626 | MS.gene47572:CDS |
| TTTGATCATAATTTATATGC+TGG | 0.428255 | 4.3:+25330122 | MS.gene47572:CDS |
| TCATCAGTTTGATTTGCAAC+AGG | 0.428405 | 4.3:+25330097 | MS.gene47572:CDS |
| CAACCACGTCCACTGTAATC+TGG | 0.432462 | 4.3:-25330714 | None:intergenic |
| TGGCCCCAGTTCTACGACCC+GGG | 0.437730 | 4.3:+25330351 | MS.gene47572:CDS |
| CAACAAGCTTTAGTTCTAAA+CGG | 0.440064 | 4.3:-25330875 | None:intergenic |
| AGAACACGGGCGACTATTAT+GGG | 0.444586 | 4.3:+25331132 | MS.gene47572:CDS |
| GACAGCACCCATGCCAACTT+TGG | 0.445539 | 4.3:-25331030 | None:intergenic |
| ATTCATATGTTCCATTTAGT+GGG | 0.448423 | 4.3:-25331076 | None:intergenic |
| TGGTCGTTAGGTTCAGGCTT+AGG | 0.450727 | 4.3:-25327687 | None:intergenic |
| CCCAAGAAAGCAGAAGGAGG+AGG | 0.461567 | 4.3:-25330215 | None:intergenic |
| TGGGCCCAAAATGTGCACTT+TGG | 0.466392 | 4.3:+25330234 | MS.gene47572:CDS |
| ACCTAACGACCAGGCTCTGC+AGG | 0.467191 | 4.3:+25327698 | MS.gene47572:CDS |
| TCCTCGCAAACTGCAAATCC+AGG | 0.470484 | 4.3:-25327267 | None:intergenic |
| TTCGAGTTTGATGATGAAGA+AGG | 0.472308 | 4.3:+25327159 | None:intergenic |
| GGATTTGCAGTTTGCGAGGA+AGG | 0.474779 | 4.3:+25327270 | MS.gene47572:CDS |
| CGACCAGGCTCTGCAGGCTG+GGG | 0.475560 | 4.3:+25327704 | MS.gene47572:CDS |
| GAATTCAGGGTGGAAGTCTT+GGG | 0.477842 | 4.3:+25327589 | MS.gene47572:intron |
| GACCCGCACAAGGGTTGGAC+TGG | 0.484548 | 4.3:+25330267 | MS.gene47572:CDS |
| ATCCTTTAAACCAATGCCCC+CGG | 0.485600 | 4.3:-25330369 | None:intergenic |
| GAAGGAGGAGGGCATATACT+TGG | 0.487811 | 4.3:-25330203 | None:intergenic |
| CTTTGATCTTTCTGTTCTCG+AGG | 0.487953 | 4.3:+25330611 | MS.gene47572:CDS |
| TAAATGGAACATATGAATAT+GGG | 0.492155 | 4.3:+25331081 | MS.gene47572:CDS |
| TCAAAATGTGGCAGCCAACC+AGG | 0.492352 | 4.3:+25330055 | MS.gene47572:CDS |
| TCCAAGACCCGCACAAGGGT+TGG | 0.493065 | 4.3:+25330262 | MS.gene47572:CDS |
| GCCGCTCTAGCTTTGAATGA+AGG | 0.497242 | 4.3:+25330317 | MS.gene47572:CDS |
| GCCAAGATCAATGCCAAAGT+TGG | 0.501693 | 4.3:+25331017 | MS.gene47572:CDS |
| CAAGTTATCAATGAATTTGG+AGG | 0.512140 | 4.3:+25330753 | MS.gene47572:CDS |
| TGCTAATCTCATATTCGTAA+AGG | 0.512641 | 4.3:-25330830 | None:intergenic |
| GGTAGATAGCTAGATATAAG+AGG | 0.516496 | 4.3:-25330182 | None:intergenic |
| TCAAAATGGTTCAGAGGCTG+TGG | 0.519821 | 4.3:-25330801 | None:intergenic |
| AGAGCCTGGTCGTTAGGTTC+AGG | 0.520922 | 4.3:-25327693 | None:intergenic |
| GAATGAAGGGCCACCAGGCA+TGG | 0.521673 | 4.3:+25330331 | MS.gene47572:CDS |
| TTCTCCACAAGATAGTCATA+TGG | 0.522377 | 4.3:-25331113 | None:intergenic |
| GCTTTGAATGAAGGGCCACC+AGG | 0.524274 | 4.3:+25330326 | MS.gene47572:CDS |
| AGTTTCCACCTGATAACAAA+AGG | 0.534609 | 4.3:+25330979 | MS.gene47572:CDS |
| GAATTACCAGGTGCATTCCA+TGG | 0.536252 | 4.3:-25330479 | None:intergenic |
| TTTGATCTTTCTGTTCTCGA+GGG | 0.536500 | 4.3:+25330612 | MS.gene47572:CDS |
| ATTCTAAAGCAGCTCCATCC+TGG | 0.540756 | 4.3:-25330073 | None:intergenic |
| CAGCAACTGCAAAGTCTCCA+TGG | 0.541576 | 4.3:+25330462 | MS.gene47572:CDS |
| GGGAGAAGGCTCGTTGAGCT+CGG | 0.543281 | 4.3:-25327359 | None:intergenic |
| GGCCCCAGTTCTACGACCCG+GGG | 0.544452 | 4.3:+25330352 | MS.gene47572:CDS |
| GATCAATGCCAAAGTTGGCA+TGG | 0.545115 | 4.3:+25331022 | MS.gene47572:CDS |
| CCGCTCTAGCTTTGAATGAA+GGG | 0.545380 | 4.3:+25330318 | MS.gene47572:CDS |
| CACCAGTCCAACCCTTGTGC+GGG | 0.549255 | 4.3:-25330269 | None:intergenic |
| ACACCAGTCCAACCCTTGTG+CGG | 0.549317 | 4.3:-25330270 | None:intergenic |
| CCTCGAAGAGCATTTGAAAG+TGG | 0.553107 | 4.3:+25330669 | MS.gene47572:CDS |
| TCGAGTTTGATGATGAAGAA+GGG | 0.554322 | 4.3:+25327160 | None:intergenic |
| ACAGCAACATGATTTCCCAT+TGG | 0.555494 | 4.3:+25330001 | MS.gene47572:CDS |
| GTTTGCGCTCATCAACCAAT+GGG | 0.555849 | 4.3:-25330016 | None:intergenic |
| ATGGCCCCAGTTCTACGACC+CGG | 0.558759 | 4.3:+25330350 | MS.gene47572:CDS |
| GAGCGCAAACACTCAACCTC+AGG | 0.559169 | 4.3:+25330029 | MS.gene47572:CDS |
| TAGAACTAAAGCTTGTTGAT+GGG | 0.559679 | 4.3:+25330880 | MS.gene47572:CDS |
| ATCAATGCCAAAGTTGGCAT+GGG | 0.569128 | 4.3:+25331023 | MS.gene47572:CDS |
| TTCATATGTTCCATTTAGTG+GGG | 0.571518 | 4.3:-25331075 | None:intergenic |
| ACTTGCTGCAATGAAGAAGC+GGG | 0.572984 | 4.3:-25327379 | None:intergenic |
| TGCAATGAAGAAGCGGGAGA+AGG | 0.575278 | 4.3:-25327373 | None:intergenic |
| TGACTATCTTGTGGAGAACA+CGG | 0.579872 | 4.3:+25331118 | MS.gene47572:CDS |
| TACTTGCTGCAATGAAGAAG+CGG | 0.580011 | 4.3:-25327380 | None:intergenic |
| GCTCTTAGTGCAAAGGCACA+AGG | 0.580099 | 4.3:+25330407 | MS.gene47572:CDS |
| TGTTTGCGCTCATCAACCAA+TGG | 0.580494 | 4.3:-25330017 | None:intergenic |
| AAGGCACAAGGAAAAGATGT+TGG | 0.580647 | 4.3:+25330419 | MS.gene47572:CDS |
| TTCATCAAATGCTTCGTGAG+TGG | 0.582116 | 4.3:+25327332 | MS.gene47572:CDS |
| TTTGGGCCCAAGAAAGCAGA+AGG | 0.584965 | 4.3:-25330221 | None:intergenic |
| AGGGCGAGACTATTAGGGAA+TGG | 0.585029 | 4.3:+25330631 | MS.gene47572:CDS |
| CCAAGAAAGCAGAAGGAGGA+GGG | 0.588070 | 4.3:-25330214 | None:intergenic |
| CAATGGTACAAGTTATTGTG+AGG | 0.589421 | 4.3:+25330148 | MS.gene47572:CDS |
| GACTATCTTGTGGAGAACAC+GGG | 0.594122 | 4.3:+25331119 | MS.gene47572:CDS |
| TTGCCAGATTACAGTGGACG+TGG | 0.598415 | 4.3:+25330711 | MS.gene47572:CDS |
| TGCCATTCAAAATGGTTCAG+AGG | 0.599568 | 4.3:-25330807 | None:intergenic |
| ATGGGAAATCATGTTGCTGT+TGG | 0.604103 | 4.3:-25329998 | None:intergenic |
| TAAAGCAGCTCCATCCTGGT+TGG | 0.604183 | 4.3:-25330069 | None:intergenic |
| TCCTGGATTTGCAGTTTGCG+AGG | 0.604508 | 4.3:+25327266 | MS.gene47572:CDS |
| AAGTCTCCATGGAATGCACC+TGG | 0.606170 | 4.3:+25330473 | MS.gene47572:CDS |
| GCACAGCAGCATCAACAGTA+CGG | 0.606444 | 4.3:-25327297 | None:intergenic |
| TGTTGGCATCCCAGAATGTG+AGG | 0.607178 | 4.3:+25330436 | MS.gene47572:CDS |
| TCATATGTTCCATTTAGTGG+GGG | 0.609101 | 4.3:-25331074 | None:intergenic |
| AATGTGGCAGCCAACCAGGA+TGG | 0.609826 | 4.3:+25330059 | MS.gene47572:CDS |
| CAGATTACAGTGGACGTGGT+TGG | 0.611374 | 4.3:+25330715 | MS.gene47572:CDS |
| GACTGTCCAAGACCCGCACA+AGG | 0.617960 | 4.3:+25330257 | MS.gene47572:CDS |
| CATACTCCACCGATATCTGT+CGG | 0.625485 | 4.3:+25327613 | MS.gene47572:CDS |
| TGCACCATATGACTATCTTG+TGG | 0.628768 | 4.3:+25331109 | MS.gene47572:CDS |
| AGAACTGGGGCCATGCCTGG+TGG | 0.629740 | 4.3:-25330341 | None:intergenic |
| TGCTGATCTACAGAAGCAGA+TGG | 0.633546 | 4.3:+25330941 | MS.gene47572:CDS |
| TGGTACAAGTTATTGTGAGG+AGG | 0.634405 | 4.3:+25330151 | MS.gene47572:CDS |
| GGGCCCAAGAAAGCAGAAGG+AGG | 0.637584 | 4.3:-25330218 | None:intergenic |
| GATAACAAAAGGCCTGCCAA+AGG | 0.643078 | 4.3:+25330990 | MS.gene47572:CDS |
| TAAGCCTGAACCTAACGACC+AGG | 0.645449 | 4.3:+25327689 | MS.gene47572:CDS |
| GACCAGGCTCTGCAGGCTGG+GGG | 0.657815 | 4.3:+25327705 | MS.gene47572:CDS |
| CCCTTCATTCAAAGCTAGAG+CGG | 0.661772 | 4.3:-25330318 | None:intergenic |
| GTTGGCATCCCAGAATGTGA+GGG | 0.666558 | 4.3:+25330437 | MS.gene47572:CDS |
| AGGTCATTGCCAGATTACAG+TGG | 0.682159 | 4.3:+25330705 | MS.gene47572:CDS |
| CAAAAGCCGACAGATATCGG+TGG | 0.685536 | 4.3:-25327619 | None:intergenic |
| TGATGGGAAGAAGAACTCCA+AGG | 0.686149 | 4.3:+25330896 | MS.gene47572:CDS |
| AACCTCAGGAGTTCAAAATG+TGG | 0.696064 | 4.3:+25330043 | MS.gene47572:CDS |
| GCCCCAGTTCTACGACCCGG+GGG | 0.700926 | 4.3:+25330353 | MS.gene47572:CDS |
| ACTGTCCAAGACCCGCACAA+GGG | 0.731238 | 4.3:+25330258 | MS.gene47572:CDS |
| AAAGTGGAAACAGAAAGCAG+AGG | 0.746526 | 4.3:+25330685 | MS.gene47572:CDS |
| TCAGCTGCAGATCATCAACA+CGG | 0.775219 | 4.3:-25327240 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAGAG+TGG | - | chr4.3:25328982-25329001 | None:intergenic | 10.0% |
| !! | ATATAAAATAAATGAAAAAG+TGG | - | chr4.3:25328098-25328117 | None:intergenic | 10.0% |
| !! | TTTCATTAACTTTGTAAATT+GGG | + | chr4.3:25329567-25329586 | MS.gene47572:intron | 15.0% |
| !!! | CATGTTTTTCTATTTTTATT+AGG | + | chr4.3:25327813-25327832 | MS.gene47572:intron | 15.0% |
| !!! | TTAATCAGTGTTATTAATAA+CGG | - | chr4.3:25328633-25328652 | None:intergenic | 15.0% |
| !! | ATAAATAAATAATACAGGCT+TGG | + | chr4.3:25329513-25329532 | MS.gene47572:intron | 20.0% |
| !! | GCTTCAATATAAATAATAGA+TGG | - | chr4.3:25328892-25328911 | None:intergenic | 20.0% |
| !! | GTTTCATTAACTTTGTAAAT+TGG | + | chr4.3:25329566-25329585 | MS.gene47572:intron | 20.0% |
| !! | TAAATATGTCGATCTTTAAA+AGG | - | chr4.3:25329865-25329884 | None:intergenic | 20.0% |
| !! | TAAATGGAACATATGAATAT+GGG | + | chr4.3:25331081-25331100 | MS.gene47572:CDS | 20.0% |
| !! | TAATATCATGTAATGTAAAC+TGG | + | chr4.3:25328650-25328669 | MS.gene47572:intron | 20.0% |
| !! | TTTGATCATAATTTATATGC+TGG | + | chr4.3:25330122-25330141 | MS.gene47572:CDS | 20.0% |
| !!! | AGTCTGTATTTTGTTATATT+TGG | + | chr4.3:25328805-25328824 | MS.gene47572:intron | 20.0% |
| !!! | CAATCTTTTAGAATCTTTTA+TGG | + | chr4.3:25330501-25330520 | MS.gene47572:intron | 20.0% |
| ! | AAGCAAGTTATCAATGAATT+TGG | + | chr4.3:25330750-25330769 | MS.gene47572:CDS | 25.0% |
| ! | AATTGATATGCTAGGAAATA+AGG | + | chr4.3:25329118-25329137 | MS.gene47572:intron | 25.0% |
| ! | AGTTCAAAACAACTAATAAC+CGG | - | chr4.3:25328344-25328363 | None:intergenic | 25.0% |
| ! | ATCAATTAGGTTTCTTGATA+GGG | - | chr4.3:25329105-25329124 | None:intergenic | 25.0% |
| ! | ATCACAATTCATAAAATTGC+TGG | - | chr4.3:25327498-25327517 | None:intergenic | 25.0% |
| ! | ATGAGGATAATGATTATGTT+AGG | + | chr4.3:25328268-25328287 | MS.gene47572:intron | 25.0% |
| ! | ATTCATATGTTCCATTTAGT+GGG | - | chr4.3:25331079-25331098 | None:intergenic | 25.0% |
| ! | ATTGAGTGACAATATATTAG+TGG | + | chr4.3:25327531-25327550 | MS.gene47572:intron | 25.0% |
| ! | ATTGCTTTATAGTGTTTCAT+AGG | + | chr4.3:25329544-25329563 | MS.gene47572:intron | 25.0% |
| ! | CAGCATTAAAATATGGATAA+AGG | - | chr4.3:25329911-25329930 | None:intergenic | 25.0% |
| ! | CTAAATGGAACATATGAATA+TGG | + | chr4.3:25331080-25331099 | MS.gene47572:CDS | 25.0% |
| ! | TATCAATTAGGTTTCTTGAT+AGG | - | chr4.3:25329106-25329125 | None:intergenic | 25.0% |
| ! | TATTCATATGTTCCATTTAG+TGG | - | chr4.3:25331080-25331099 | None:intergenic | 25.0% |
| ! | TATTTCCTAGCATATCAATT+AGG | - | chr4.3:25329118-25329137 | None:intergenic | 25.0% |
| ! | TCTATAAACTGCCATAAATA+AGG | - | chr4.3:25329471-25329490 | None:intergenic | 25.0% |
| ! | TGAGGATAATGATTATGTTA+GGG | + | chr4.3:25328269-25328288 | MS.gene47572:intron | 25.0% |
| ! | TTATATTGAAGCCAGAAAAA+TGG | + | chr4.3:25328900-25328919 | MS.gene47572:intron | 25.0% |
| !! | AACAAAAAGCAATCAAGTTT+TGG | - | chr4.3:25329417-25329436 | None:intergenic | 25.0% |
| !! | AGCAATTTTATGAATTGTGA+TGG | + | chr4.3:25327497-25327516 | MS.gene47572:intron | 25.0% |
| !! | ATAATATCATCCTTTTCTAG+AGG | - | chr4.3:25328708-25328727 | None:intergenic | 25.0% |
| !! | TCTTCTTTTGAATCAGTTAA+AGG | - | chr4.3:25329790-25329809 | None:intergenic | 25.0% |
| !! | TTCTAAAAGATTGAATTACC+AGG | - | chr4.3:25330494-25330513 | None:intergenic | 25.0% |
| !!! | AATTTATATGCTGGTTTCAA+TGG | + | chr4.3:25330131-25330150 | MS.gene47572:CDS | 25.0% |
| !!! | ATTTGAACATACCATTTTTC+TGG | - | chr4.3:25328914-25328933 | None:intergenic | 25.0% |
| AAAACTCAATGTGCATACAT+TGG | + | chr4.3:25328945-25328964 | MS.gene47572:intron | 30.0% | |
| ACAATATTGCTAAACCTTGT+AGG | - | chr4.3:25330558-25330577 | None:intergenic | 30.0% | |
| ACATAACATATCCAACAAAC+TGG | - | chr4.3:25329722-25329741 | None:intergenic | 30.0% | |
| AGAAACCTAATTGATATGCT+AGG | + | chr4.3:25329110-25329129 | MS.gene47572:intron | 30.0% | |
| AGAGATAGTTGAAAAAGATG+TGG | + | chr4.3:25329017-25329036 | MS.gene47572:intron | 30.0% | |
| ATAACATATCCAACAAACTG+GGG | - | chr4.3:25329720-25329739 | None:intergenic | 30.0% | |
| ATCCGTTATTGCTTAAATAG+CGG | + | chr4.3:25328038-25328057 | MS.gene47572:intron | 30.0% | |
| CAAGTTATCAATGAATTTGG+AGG | + | chr4.3:25330753-25330772 | MS.gene47572:CDS | 30.0% | |
| CATAACATATCCAACAAACT+GGG | - | chr4.3:25329721-25329740 | None:intergenic | 30.0% | |
| GAGATAGTTGAAAAAGATGT+GGG | + | chr4.3:25329018-25329037 | MS.gene47572:intron | 30.0% | |
| GGATTCCATTTAAAAGTTGA+AGG | + | chr4.3:25328225-25328244 | MS.gene47572:intron | 30.0% | |
| TAATGATTATGTTAGGGAAG+AGG | + | chr4.3:25328275-25328294 | MS.gene47572:intron | 30.0% | |
| TATGAGATGAAGAGATAAGA+TGG | - | chr4.3:25328177-25328196 | None:intergenic | 30.0% | |
| TCATGTAATGTAAACTGGAA+AGG | + | chr4.3:25328655-25328674 | MS.gene47572:intron | 30.0% | |
| TCTGAAGAGATCCTATTATA+TGG | + | chr4.3:25330776-25330795 | MS.gene47572:CDS | 30.0% | |
| TGCTAATCTCATATTCGTAA+AGG | - | chr4.3:25330833-25330852 | None:intergenic | 30.0% | |
| TGGATATGTTATGTTGCAAT+GGG | + | chr4.3:25329728-25329747 | MS.gene47572:intron | 30.0% | |
| TGGCATTCAAATTTCAAGAA+CGG | - | chr4.3:25328872-25328891 | None:intergenic | 30.0% | |
| TGTAATTGTAACAAGTTTCC+TGG | + | chr4.3:25329957-25329976 | MS.gene47572:intron | 30.0% | |
| TTACCGTGTGAATAAATCTT+GGG | + | chr4.3:25329437-25329456 | MS.gene47572:intron | 30.0% | |
| TTATCACTAGTTAGAACTAC+CGG | + | chr4.3:25328322-25328341 | MS.gene47572:intron | 30.0% | |
| TTCATATGTTCCATTTAGTG+GGG | - | chr4.3:25331078-25331097 | None:intergenic | 30.0% | |
| TTCCGCTATTTAAGCAATAA+CGG | - | chr4.3:25328043-25328062 | None:intergenic | 30.0% | |
| TTGGATATGTTATGTTGCAA+TGG | + | chr4.3:25329727-25329746 | MS.gene47572:intron | 30.0% | |
| TTTAATTATTTCCCCCTTGT+TGG | + | chr4.3:25330577-25330596 | MS.gene47572:intron | 30.0% | |
| TTTACCGTGTGAATAAATCT+TGG | + | chr4.3:25329436-25329455 | MS.gene47572:intron | 30.0% | |
| ! | CACATCCTTCAACTTTTAAA+TGG | - | chr4.3:25328233-25328252 | None:intergenic | 30.0% |
| ! | TCTTTTGAATCAGTTAAAGG+AGG | - | chr4.3:25329787-25329806 | None:intergenic | 30.0% |
| ! | TGAGTTTCTTATTCCCTTTT+GGG | + | chr4.3:25327748-25327767 | MS.gene47572:intron | 30.0% |
| ! | TTGTTTGAGATAACTGTCAT+GGG | + | chr4.3:25327459-25327478 | MS.gene47572:intron | 30.0% |
| ! | TTTGTTTGAGATAACTGTCA+TGG | + | chr4.3:25327458-25327477 | MS.gene47572:intron | 30.0% |
| !! | AGGAAACTTGTTACAATTAC+AGG | - | chr4.3:25329958-25329977 | None:intergenic | 30.0% |
| !! | ATCATTTGTTATTCTTGCCT+TGG | - | chr4.3:25330916-25330935 | None:intergenic | 30.0% |
| !! | CAACAAGCTTTAGTTCTAAA+CGG | - | chr4.3:25330878-25330897 | None:intergenic | 30.0% |
| !! | CTTTAGTTCTAAACGGTATA+AGG | - | chr4.3:25330871-25330890 | None:intergenic | 30.0% |
| !! | TAGAACTAAAGCTTGTTGAT+GGG | + | chr4.3:25330880-25330899 | MS.gene47572:CDS | 30.0% |
| !! | TTAGAACTAAAGCTTGTTGA+TGG | + | chr4.3:25330879-25330898 | MS.gene47572:CDS | 30.0% |
| !!! | TATTTCTCATAGCGGATTTT+CGG | + | chr4.3:25328586-25328605 | MS.gene47572:intron | 30.0% |
| AAGTGTGTGGAGAAAAGATA+GGG | + | chr4.3:25329065-25329084 | MS.gene47572:intron | 35.0% | |
| ACAAAGAGTTGGGTTTATCA+TGG | - | chr4.3:25329297-25329316 | None:intergenic | 35.0% | |
| ACCAGCTCAGCATTAAAATA+TGG | - | chr4.3:25329918-25329937 | None:intergenic | 35.0% | |
| AGAAATAGCAGATAGTGAAG+TGG | - | chr4.3:25328573-25328592 | None:intergenic | 35.0% | |
| AGTTGTTAATTCCATCTACC+TGG | + | chr4.3:25329337-25329356 | MS.gene47572:intron | 35.0% | |
| AGTTTCCACCTGATAACAAA+AGG | + | chr4.3:25330979-25330998 | MS.gene47572:CDS | 35.0% | |
| ATAAGATGGAGATACAGATG+TGG | - | chr4.3:25328163-25328182 | None:intergenic | 35.0% | |
| ATAGATTATCCATCCCCAAA+AGG | - | chr4.3:25327765-25327784 | None:intergenic | 35.0% | |
| ATCACGTTAAAGTGCATACT+CGG | - | chr4.3:25329368-25329387 | None:intergenic | 35.0% | |
| ATCTCCTTCAAGACATTGAT+CGG | + | chr4.3:25328201-25328220 | MS.gene47572:intron | 35.0% | |
| CAAATCTCGAAACGTAATAG+CGG | - | chr4.3:25327936-25327955 | None:intergenic | 35.0% | |
| CAATGGTACAAGTTATTGTG+AGG | + | chr4.3:25330148-25330167 | MS.gene47572:CDS | 35.0% | |
| CCTGGTTTAACTGTAAAACA+GGG | + | chr4.3:25329975-25329994 | MS.gene47572:intron | 35.0% | |
| CTGCCATAAATAAGGTACAT+AGG | - | chr4.3:25329463-25329482 | None:intergenic | 35.0% | |
| GAAACATGTGTAAACTCTTG+AGG | - | chr4.3:25329843-25329862 | None:intergenic | 35.0% | |
| GAAATAGCAGATAGTGAAGT+GGG | - | chr4.3:25328572-25328591 | None:intergenic | 35.0% | |
| GGATATCACCAATATGCAAA+AGG | - | chr4.3:25328022-25328041 | None:intergenic | 35.0% | |
| GGCAGTTTATAGACTTTGAA+AGG | + | chr4.3:25329478-25329497 | MS.gene47572:intron | 35.0% | |
| GGTAGATAGCTAGATATAAG+AGG | - | chr4.3:25330185-25330204 | None:intergenic | 35.0% | |
| TAAACCCAACTCTTTGTATG+TGG | + | chr4.3:25329300-25329319 | MS.gene47572:intron | 35.0% | |
| TAGATTATCCATCCCCAAAA+GGG | - | chr4.3:25327764-25327783 | None:intergenic | 35.0% | |
| TATTTCAGAAAATGCGTCTC+TGG | + | chr4.3:25329234-25329253 | MS.gene47572:intron | 35.0% | |
| TCAACCACATACAAAGAGTT+GGG | - | chr4.3:25329307-25329326 | None:intergenic | 35.0% | |
| TCATATGTTCCATTTAGTGG+GGG | - | chr4.3:25331077-25331096 | None:intergenic | 35.0% | |
| TCCTGGTTTAACTGTAAAAC+AGG | + | chr4.3:25329974-25329993 | MS.gene47572:intron | 35.0% | |
| TGGAATAGTCATTAAGCATC+AGG | + | chr4.3:25329619-25329638 | MS.gene47572:intron | 35.0% | |
| TTACAGGTGAGATCTAGTTA+CGG | - | chr4.3:25329942-25329961 | None:intergenic | 35.0% | |
| TTCTCCACAAGATAGTCATA+TGG | - | chr4.3:25331116-25331135 | None:intergenic | 35.0% | |
| TTTGATCTTTCTGTTCTCGA+GGG | + | chr4.3:25330612-25330631 | MS.gene47572:CDS | 35.0% | |
| ! | AAAGCTGTGATTTTGAACTG+TGG | + | chr4.3:25327555-25327574 | MS.gene47572:intron | 35.0% |
| ! | AAGTTAGAAAGAGAAGTGTG+TGG | + | chr4.3:25329052-25329071 | MS.gene47572:intron | 35.0% |
| ! | ACTGATTCAAAAGAAGAGAG+AGG | + | chr4.3:25329793-25329812 | MS.gene47572:intron | 35.0% |
| ! | ATCCTCATTTTCAGATAGTG+AGG | - | chr4.3:25328256-25328275 | None:intergenic | 35.0% |
| ! | GAATCAGTTGCTTTCAAATC+AGG | - | chr4.3:25329645-25329664 | None:intergenic | 35.0% |
| ! | GAGTTTCTTATTCCCTTTTG+GGG | + | chr4.3:25327749-25327768 | MS.gene47572:intron | 35.0% |
| ! | GTGAGTTTCTTATTCCCTTT+TGG | + | chr4.3:25327747-25327766 | MS.gene47572:intron | 35.0% |
| ! | GTTTTCACCAGTCATTAAGT+GGG | + | chr4.3:25328745-25328764 | MS.gene47572:intron | 35.0% |
| ! | TGCATCACATAGTCTTTTCA+AGG | + | chr4.3:25327204-25327223 | MS.gene47572:CDS | 35.0% |
| ! | TGTTTTCACCAGTCATTAAG+TGG | + | chr4.3:25328744-25328763 | MS.gene47572:intron | 35.0% |
| ! | TTTTCACCAGTCATTAAGTG+GGG | + | chr4.3:25328746-25328765 | MS.gene47572:intron | 35.0% |
| ! | TTTTGAACTGTGGTGTTTGT+TGG | + | chr4.3:25327565-25327584 | MS.gene47572:intron | 35.0% |
| ! | TTTTTCTGCTCTTAGTGCAA+AGG | + | chr4.3:25330400-25330419 | MS.gene47572:CDS | 35.0% |
| !! | ACATAGTCTTTTCAAGGACA+AGG | + | chr4.3:25327210-25327229 | MS.gene47572:CDS | 35.0% |
| !! | CTATCTGCTATTTCTCATAG+CGG | + | chr4.3:25328578-25328597 | MS.gene47572:intron | 35.0% |
| !! | TCATCAGTTTGATTTGCAAC+AGG | + | chr4.3:25330097-25330116 | MS.gene47572:CDS | 35.0% |
| !!! | GAGACGCATTTTCTGAAATA+TGG | - | chr4.3:25329234-25329253 | None:intergenic | 35.0% |
| !!! | GGGTAACATCATTTTTCAAG+AGG | + | chr4.3:25327725-25327744 | MS.gene47572:CDS | 35.0% |
| !!! | TCCATATTTTAATGCTGAGC+TGG | + | chr4.3:25329914-25329933 | MS.gene47572:intron | 35.0% |
| AAAGTGGAAACAGAAAGCAG+AGG | + | chr4.3:25330685-25330704 | MS.gene47572:CDS | 40.0% | |
| AACCTCAGGAGTTCAAAATG+TGG | + | chr4.3:25330043-25330062 | MS.gene47572:CDS | 40.0% | |
| AAGGCACAAGGAAAAGATGT+TGG | + | chr4.3:25330419-25330438 | MS.gene47572:CDS | 40.0% | |
| ACAGCAACATGATTTCCCAT+TGG | + | chr4.3:25330001-25330020 | MS.gene47572:CDS | 40.0% | |
| AGATGTGGTTTAGTGATGAG+AGG | - | chr4.3:25328148-25328167 | None:intergenic | 40.0% | |
| AGGCCCAAGATTTATTCACA+CGG | - | chr4.3:25329443-25329462 | None:intergenic | 40.0% | |
| AGGCTGTGGATCCATATAAT+AGG | - | chr4.3:25330790-25330809 | None:intergenic | 40.0% | |
| ATAGTGAAGTGGGCAAATAG+CGG | - | chr4.3:25328562-25328581 | None:intergenic | 40.0% | |
| ATCAATGCCAAAGTTGGCAT+GGG | + | chr4.3:25331023-25331042 | MS.gene47572:CDS | 40.0% | |
| ATGGGAAATCATGTTGCTGT+TGG | - | chr4.3:25330001-25330020 | None:intergenic | 40.0% | |
| CAACTCTTTGTATGTGGTTG+AGG | + | chr4.3:25329306-25329325 | MS.gene47572:intron | 40.0% | |
| CTCAACCACATACAAAGAGT+TGG | - | chr4.3:25329308-25329327 | None:intergenic | 40.0% | |
| CTTTGATCTTTCTGTTCTCG+AGG | + | chr4.3:25330611-25330630 | MS.gene47572:CDS | 40.0% | |
| GAAACGTAATAGCGGTATAG+CGG | - | chr4.3:25327928-25327947 | None:intergenic | 40.0% | |
| GAAGTGTGTGGAGAAAAGAT+AGG | + | chr4.3:25329064-25329083 | MS.gene47572:intron | 40.0% | |
| GTACAGTGTGCAAGAAAAGA+TGG | - | chr4.3:25329889-25329908 | None:intergenic | 40.0% | |
| GTTATGTTGCAATGGGCATT+AGG | + | chr4.3:25329735-25329754 | MS.gene47572:intron | 40.0% | |
| TCACTTTCGATTTCTGCTAC+TGG | + | chr4.3:25328385-25328404 | MS.gene47572:intron | 40.0% | |
| TGACTATCTTGTGGAGAACA+CGG | + | chr4.3:25331118-25331137 | MS.gene47572:CDS | 40.0% | |
| TGCACCATATGACTATCTTG+TGG | + | chr4.3:25331109-25331128 | MS.gene47572:CDS | 40.0% | |
| TGCCATTCAAAATGGTTCAG+AGG | - | chr4.3:25330810-25330829 | None:intergenic | 40.0% | |
| TGCCTCACTATCTGAAAATG+AGG | + | chr4.3:25328251-25328270 | MS.gene47572:intron | 40.0% | |
| TGGTACAAGTTATTGTGAGG+AGG | + | chr4.3:25330151-25330170 | MS.gene47572:CDS | 40.0% | |
| TTCAATGCAATTGCAGCTAG+TGG | + | chr4.3:25327433-25327452 | MS.gene47572:intron | 40.0% | |
| TTCATCAAATGCTTCGTGAG+TGG | + | chr4.3:25327332-25327351 | MS.gene47572:CDS | 40.0% | |
| ! | AGCCTCTGAACCATTTTGAA+TGG | + | chr4.3:25330805-25330824 | MS.gene47572:CDS | 40.0% |
| ! | AGTCCCAAAGTGCACATTTT+GGG | - | chr4.3:25330241-25330260 | None:intergenic | 40.0% |
| ! | CCCTGTTTTACAGTTAAACC+AGG | - | chr4.3:25329978-25329997 | None:intergenic | 40.0% |
| ! | CGAATCTTCTCCTCTAGAAA+AGG | + | chr4.3:25328695-25328714 | MS.gene47572:intron | 40.0% |
| ! | GGGCCTATGTACCTTATTTA+TGG | + | chr4.3:25329457-25329476 | MS.gene47572:intron | 40.0% |
| ! | GGTGTTTGTTGGTGAATTCA+GGG | + | chr4.3:25327576-25327595 | MS.gene47572:intron | 40.0% |
| ! | TACTTGCTGCAATGAAGAAG+CGG | - | chr4.3:25327383-25327402 | None:intergenic | 40.0% |
| ! | TAGCAGTGCCTTTTGCATAT+TGG | + | chr4.3:25328011-25328030 | MS.gene47572:intron | 40.0% |
| ! | TGGTGTTTGTTGGTGAATTC+AGG | + | chr4.3:25327575-25327594 | MS.gene47572:intron | 40.0% |
| !! | CGTAAAGGTGCCATTCAAAA+TGG | - | chr4.3:25330818-25330837 | None:intergenic | 40.0% |
| !! | TTCTTATTCCCTTTTGGGGA+TGG | + | chr4.3:25327753-25327772 | MS.gene47572:intron | 40.0% |
| AAACGACCCCACTTAATGAC+TGG | - | chr4.3:25328755-25328774 | None:intergenic | 45.0% | |
| AAAGATAGGGCCCATGATCA+TGG | + | chr4.3:25329078-25329097 | MS.gene47572:intron | 45.0% | |
| AACGGATCGTGCAAAATAGC+AGG | - | chr4.3:25328615-25328634 | None:intergenic | 45.0% | |
| AAGATAGGGCCCATGATCAT+GGG | + | chr4.3:25329079-25329098 | MS.gene47572:intron | 45.0% | |
| AGAACACGGGCGACTATTAT+GGG | + | chr4.3:25331132-25331151 | MS.gene47572:CDS | 45.0% | |
| AGGTCATTGCCAGATTACAG+TGG | + | chr4.3:25330705-25330724 | MS.gene47572:CDS | 45.0% | |
| ATCCTTTAAACCAATGCCCC+CGG | - | chr4.3:25330372-25330391 | None:intergenic | 45.0% | |
| CACTGCTATTGCAGTGATAG+CGG | - | chr4.3:25327999-25328018 | None:intergenic | 45.0% | |
| CATACTCCACCGATATCTGT+CGG | + | chr4.3:25327613-25327632 | MS.gene47572:CDS | 45.0% | |
| CATATCCAACAAACTGGGGT+AGG | - | chr4.3:25329716-25329735 | None:intergenic | 45.0% | |
| CATTACCTACCCCAGTTTGT+TGG | + | chr4.3:25329708-25329727 | MS.gene47572:intron | 45.0% | |
| CCACTTTCAAATGCTCTTCG+AGG | - | chr4.3:25330672-25330691 | None:intergenic | 45.0% | |
| CCCTTCATTCAAAGCTAGAG+CGG | - | chr4.3:25330321-25330340 | None:intergenic | 45.0% | |
| CTGCAAAAGCCGACAGATAT+CGG | - | chr4.3:25327625-25327644 | None:intergenic | 45.0% | |
| GAATTACCAGGTGCATTCCA+TGG | - | chr4.3:25330482-25330501 | None:intergenic | 45.0% | |
| GAATTCAGGGTGGAAGTCTT+GGG | + | chr4.3:25327589-25327608 | MS.gene47572:intron | 45.0% | |
| GACTATCTTGTGGAGAACAC+GGG | + | chr4.3:25331119-25331138 | MS.gene47572:CDS | 45.0% | |
| GATAACAAAAGGCCTGCCAA+AGG | + | chr4.3:25330990-25331009 | MS.gene47572:CDS | 45.0% | |
| GATCAATGCCAAAGTTGGCA+TGG | + | chr4.3:25331022-25331041 | MS.gene47572:CDS | 45.0% | |
| GCCAAGATCAATGCCAAAGT+TGG | + | chr4.3:25331017-25331036 | MS.gene47572:CDS | 45.0% | |
| GTTTGCGCTCATCAACCAAT+GGG | - | chr4.3:25330019-25330038 | None:intergenic | 45.0% | |
| TCAAAATGGTTCAGAGGCTG+TGG | - | chr4.3:25330804-25330823 | None:intergenic | 45.0% | |
| TCAGCTGCAGATCATCAACA+CGG | - | chr4.3:25327243-25327262 | None:intergenic | 45.0% | |
| TCAGGCTTAGGTGCAGTTAA+TGG | - | chr4.3:25327678-25327697 | None:intergenic | 45.0% | |
| TCCTCCGATCAATGTCTTGA+AGG | - | chr4.3:25328208-25328227 | None:intergenic | 45.0% | |
| TCCTTCAAGACATTGATCGG+AGG | + | chr4.3:25328204-25328223 | MS.gene47572:intron | 45.0% | |
| TGAATTCAGGGTGGAAGTCT+TGG | + | chr4.3:25327588-25327607 | MS.gene47572:intron | 45.0% | |
| TGATGGGAAGAAGAACTCCA+AGG | + | chr4.3:25330896-25330915 | MS.gene47572:CDS | 45.0% | |
| TGCTGATCTACAGAAGCAGA+TGG | + | chr4.3:25330941-25330960 | MS.gene47572:CDS | 45.0% | |
| TGTTTGCGCTCATCAACCAA+TGG | - | chr4.3:25330020-25330039 | None:intergenic | 45.0% | |
| TTGATAGGGCCCATGATCAT+GGG | - | chr4.3:25329091-25329110 | None:intergenic | 45.0% | |
| TTTAGTGATGAGAGGCTAGC+TGG | - | chr4.3:25328140-25328159 | None:intergenic | 45.0% | |
| TTTGTCTGCTACAGCCTACA+AGG | + | chr4.3:25330541-25330560 | MS.gene47572:intron | 45.0% | |
| ! | AAAGAAGAGAGAGGCTCTGA+TGG | + | chr4.3:25329802-25329821 | MS.gene47572:intron | 45.0% |
| ! | ACTTGCTGCAATGAAGAAGC+GGG | - | chr4.3:25327382-25327401 | None:intergenic | 45.0% |
| ! | CAGTCCCAAAGTGCACATTT+TGG | - | chr4.3:25330242-25330261 | None:intergenic | 45.0% |
| ! | GTTTGTTGGTGAATTCAGGG+TGG | + | chr4.3:25327579-25327598 | MS.gene47572:intron | 45.0% |
| ! | TAGCGTTTCGCCTTTTGTTG+CGG | - | chr4.3:25327969-25327988 | None:intergenic | 45.0% |
| ! | TGCCACATTTTGAACTCCTG+AGG | - | chr4.3:25330048-25330067 | None:intergenic | 45.0% |
| !! | ATTCTAAAGCAGCTCCATCC+TGG | - | chr4.3:25330076-25330095 | None:intergenic | 45.0% |
| !! | ATTGATCTTGGCTCTGCCTT+TGG | - | chr4.3:25331009-25331028 | None:intergenic | 45.0% |
| !! | CCGCTCTAGCTTTGAATGAA+GGG | + | chr4.3:25330318-25330337 | MS.gene47572:CDS | 45.0% |
| !! | CCTCGAAGAGCATTTGAAAG+TGG | + | chr4.3:25330669-25330688 | MS.gene47572:CDS | 45.0% |
| !! | GCCAACTTTGGCATTGATCT+TGG | - | chr4.3:25331021-25331040 | None:intergenic | 45.0% |
| !! | TTGGCAGGCCTTTTGTTATC+AGG | - | chr4.3:25330990-25331009 | None:intergenic | 45.0% |
| !! | AATTAATAAATAAATAATAC+AGG | + | chr4.3:25329508-25329527 | MS.gene47572:intron | 5.0% |
| AAGAGCTCTGCACTCCAACA+AGG | - | chr4.3:25330594-25330613 | None:intergenic | 50.0% | |
| AAGCAACCACCCGCAACAAA+AGG | + | chr4.3:25327956-25327975 | MS.gene47572:intron | 50.0% | |
| AAGTCTCCATGGAATGCACC+TGG | + | chr4.3:25330473-25330492 | MS.gene47572:CDS | 50.0% | |
| AGAGCTCTGCACTCCAACAA+GGG | - | chr4.3:25330593-25330612 | None:intergenic | 50.0% | |
| AGGGCGAGACTATTAGGGAA+TGG | + | chr4.3:25330631-25330650 | MS.gene47572:CDS | 50.0% | |
| CAAAAGCCGACAGATATCGG+TGG | - | chr4.3:25327622-25327641 | None:intergenic | 50.0% | |
| CAACCACGTCCACTGTAATC+TGG | - | chr4.3:25330717-25330736 | None:intergenic | 50.0% | |
| CACAGAATGCCCCCACTAAA+TGG | + | chr4.3:25331065-25331084 | MS.gene47572:CDS | 50.0% | |
| CAGATTACAGTGGACGTGGT+TGG | + | chr4.3:25330715-25330734 | MS.gene47572:CDS | 50.0% | |
| CAGCAACTGCAAAGTCTCCA+TGG | + | chr4.3:25330462-25330481 | MS.gene47572:CDS | 50.0% | |
| CCAAGAAAGCAGAAGGAGGA+GGG | - | chr4.3:25330217-25330236 | None:intergenic | 50.0% | |
| CCTCCTCCTTCTGCTTTCTT+GGG | + | chr4.3:25330215-25330234 | MS.gene47572:CDS | 50.0% | |
| CTTGATAGGGCCCATGATCA+TGG | - | chr4.3:25329092-25329111 | None:intergenic | 50.0% | |
| GAGAACACGGGCGACTATTA+TGG | + | chr4.3:25331131-25331150 | MS.gene47572:CDS | 50.0% | |
| GCACAGCAGCATCAACAGTA+CGG | - | chr4.3:25327300-25327319 | None:intergenic | 50.0% | |
| GGATTTGCAGTTTGCGAGGA+AGG | + | chr4.3:25327270-25327289 | MS.gene47572:CDS | 50.0% | |
| GGGCCCAAAATGTGCACTTT+GGG | + | chr4.3:25330235-25330254 | MS.gene47572:CDS | 50.0% | |
| GTTGGCATCCCAGAATGTGA+GGG | + | chr4.3:25330437-25330456 | MS.gene47572:CDS | 50.0% | |
| TAAAGCAGCTCCATCCTGGT+TGG | - | chr4.3:25330072-25330091 | None:intergenic | 50.0% | |
| TAAGCCTGAACCTAACGACC+AGG | + | chr4.3:25327689-25327708 | MS.gene47572:CDS | 50.0% | |
| TCAAAATGTGGCAGCCAACC+AGG | + | chr4.3:25330055-25330074 | MS.gene47572:CDS | 50.0% | |
| TCCTCGCAAACTGCAAATCC+AGG | - | chr4.3:25327270-25327289 | None:intergenic | 50.0% | |
| TCCTGGATTTGCAGTTTGCG+AGG | + | chr4.3:25327266-25327285 | MS.gene47572:CDS | 50.0% | |
| TCCTTTAAACCAATGCCCCC+GGG | - | chr4.3:25330371-25330390 | None:intergenic | 50.0% | |
| TCTCGAGGGCGAGACTATTA+GGG | + | chr4.3:25330626-25330645 | MS.gene47572:CDS | 50.0% | |
| TGATCTGCAGCTGATGTTCC+TGG | + | chr4.3:25327249-25327268 | MS.gene47572:CDS | 50.0% | |
| TGCAATGAAGAAGCGGGAGA+AGG | - | chr4.3:25327376-25327395 | None:intergenic | 50.0% | |
| TGGGCCCAAAATGTGCACTT+TGG | + | chr4.3:25330234-25330253 | MS.gene47572:CDS | 50.0% | |
| TGGTCGTTAGGTTCAGGCTT+AGG | - | chr4.3:25327690-25327709 | None:intergenic | 50.0% | |
| TGTTGGCATCCCAGAATGTG+AGG | + | chr4.3:25330436-25330455 | MS.gene47572:CDS | 50.0% | |
| TTCTCGAGGGCGAGACTATT+AGG | + | chr4.3:25330625-25330644 | MS.gene47572:CDS | 50.0% | |
| TTGCCAGATTACAGTGGACG+TGG | + | chr4.3:25330711-25330730 | MS.gene47572:CDS | 50.0% | |
| TTGCTGCTCCCTCACATTCT+GGG | - | chr4.3:25330448-25330467 | None:intergenic | 50.0% | |
| TTTGGGCCCAAGAAAGCAGA+AGG | - | chr4.3:25330224-25330243 | None:intergenic | 50.0% | |
| ! | AGCGTTTCGCCTTTTGTTGC+GGG | - | chr4.3:25327968-25327987 | None:intergenic | 50.0% |
| ! | GAAGGAGGAGGGCATATACT+TGG | - | chr4.3:25330206-25330225 | None:intergenic | 50.0% |
| ! | GCTCTTAGTGCAAAGGCACA+AGG | + | chr4.3:25330407-25330426 | MS.gene47572:CDS | 50.0% |
| !! | GCAGGCCTTTTGTTATCAGG+TGG | - | chr4.3:25330987-25331006 | None:intergenic | 50.0% |
| !! | GCCGCTCTAGCTTTGAATGA+AGG | + | chr4.3:25330317-25330336 | MS.gene47572:CDS | 50.0% |
| !! | GTTAGCTCTGATGTGCTGCA+TGG | + | chr4.3:25329599-25329618 | MS.gene47572:intron | 50.0% |
| AATGTGGCAGCCAACCAGGA+TGG | + | chr4.3:25330059-25330078 | MS.gene47572:CDS | 55.0% | |
| ACACCAGTCCAACCCTTGTG+CGG | - | chr4.3:25330273-25330292 | None:intergenic | 55.0% | |
| ACTCGGTAGCTCCAGGTAGA+TGG | - | chr4.3:25329351-25329370 | None:intergenic | 55.0% | |
| ACTGTCCAAGACCCGCACAA+GGG | + | chr4.3:25330258-25330277 | MS.gene47572:CDS | 55.0% | |
| AGAGCCTGGTCGTTAGGTTC+AGG | - | chr4.3:25327696-25327715 | None:intergenic | 55.0% | |
| AGCTCTGCACTCCAACAAGG+GGG | - | chr4.3:25330591-25330610 | None:intergenic | 55.0% | |
| AGTGCATACTCGGTAGCTCC+AGG | - | chr4.3:25329358-25329377 | None:intergenic | 55.0% | |
| CCCAAGAAAGCAGAAGGAGG+AGG | - | chr4.3:25330218-25330237 | None:intergenic | 55.0% | |
| CCCTCCTCCTTCTGCTTTCT+TGG | + | chr4.3:25330214-25330233 | MS.gene47572:CDS | 55.0% | |
| GACAGCACCCATGCCAACTT+TGG | - | chr4.3:25331033-25331052 | None:intergenic | 55.0% | |
| GAGCGCAAACACTCAACCTC+AGG | + | chr4.3:25330029-25330048 | MS.gene47572:CDS | 55.0% | |
| GAGCTCTGCACTCCAACAAG+GGG | - | chr4.3:25330592-25330611 | None:intergenic | 55.0% | |
| GCGGTATAGCGGCGCTATAT+CGG | - | chr4.3:25327917-25327936 | None:intergenic | 55.0% | |
| GTTGCTGCTCCCTCACATTC+TGG | - | chr4.3:25330449-25330468 | None:intergenic | 55.0% | |
| ! | AGAGAGAGGCTCTGATGGTG+TGG | + | chr4.3:25329807-25329826 | MS.gene47572:intron | 55.0% |
| ! | GCTTTGAATGAAGGGCCACC+AGG | + | chr4.3:25330326-25330345 | MS.gene47572:CDS | 55.0% |
| ! | GCTTTTGCAGCTCTGTGAGG+AGG | + | chr4.3:25327635-25327654 | MS.gene47572:CDS | 55.0% |
| ! | GTTTCGCCTTTTGTTGCGGG+TGG | - | chr4.3:25327965-25327984 | None:intergenic | 55.0% |
| ! | TCGGCTTTTGCAGCTCTGTG+AGG | + | chr4.3:25327632-25327651 | MS.gene47572:CDS | 55.0% |
| !! | ACCCGGGGGCATTGGTTTAA+AGG | + | chr4.3:25330367-25330386 | MS.gene47572:CDS | 55.0% |
| !! | ATCTTGGCTCTGCCTTTGGC+AGG | - | chr4.3:25331005-25331024 | None:intergenic | 55.0% |
| !! | ATGAGAGGCTAGCTGGCTTG+TGG | - | chr4.3:25328133-25328152 | None:intergenic | 55.0% |
| !! | TAGCTGGCTTGTGGGGCTTA+GGG | - | chr4.3:25328124-25328143 | None:intergenic | 55.0% |
| !! | TGAGAGGCTAGCTGGCTTGT+GGG | - | chr4.3:25328132-25328151 | None:intergenic | 55.0% |
| ACCTAACGACCAGGCTCTGC+AGG | + | chr4.3:25327698-25327717 | MS.gene47572:CDS | 60.0% | |
| ATGGCCCCAGTTCTACGACC+CGG | + | chr4.3:25330350-25330369 | MS.gene47572:CDS | 60.0% | |
| CACCAGTCCAACCCTTGTGC+GGG | - | chr4.3:25330272-25330291 | None:intergenic | 60.0% | |
| GAATGAAGGGCCACCAGGCA+TGG | + | chr4.3:25330331-25330350 | MS.gene47572:CDS | 60.0% | |
| GACTGTCCAAGACCCGCACA+AGG | + | chr4.3:25330257-25330276 | MS.gene47572:CDS | 60.0% | |
| GGGAGAAGGCTCGTTGAGCT+CGG | - | chr4.3:25327362-25327381 | None:intergenic | 60.0% | |
| GGGCCCAAGAAAGCAGAAGG+AGG | - | chr4.3:25330221-25330240 | None:intergenic | 60.0% | |
| TCCAACCCTTGTGCGGGTCT+TGG | - | chr4.3:25330266-25330285 | None:intergenic | 60.0% | |
| TCCAAGACCCGCACAAGGGT+TGG | + | chr4.3:25330262-25330281 | MS.gene47572:CDS | 60.0% | |
| !! | AGCTGGCTTGTGGGGCTTAG+GGG | - | chr4.3:25328123-25328142 | None:intergenic | 60.0% |
| !! | CTAGCTGGCTTGTGGGGCTT+AGG | - | chr4.3:25328125-25328144 | None:intergenic | 60.0% |
| !! | GAGAGGCTAGCTGGCTTGTG+GGG | - | chr4.3:25328131-25328150 | None:intergenic | 60.0% |
| !! | GGGGGCATTCTGTGAGAAGC+TGG | - | chr4.3:25331059-25331078 | None:intergenic | 60.0% |
| AACGACCAGGCTCTGCAGGC+TGG | + | chr4.3:25327702-25327721 | MS.gene47572:CDS | 65.0% | |
| ACGACCAGGCTCTGCAGGCT+GGG | + | chr4.3:25327703-25327722 | MS.gene47572:CDS | 65.0% | |
| AGAACTGGGGCCATGCCTGG+TGG | - | chr4.3:25330344-25330363 | None:intergenic | 65.0% | |
| ATGCCCCCGGGTCGTAGAAC+TGG | - | chr4.3:25330359-25330378 | None:intergenic | 65.0% | |
| CGTAGAACTGGGGCCATGCC+TGG | - | chr4.3:25330347-25330366 | None:intergenic | 65.0% | |
| GACCCGCACAAGGGTTGGAC+TGG | + | chr4.3:25330267-25330286 | MS.gene47572:CDS | 65.0% | |
| GCCTGCAGAGCCTGGTCGTT+AGG | - | chr4.3:25327702-25327721 | None:intergenic | 65.0% | |
| TGCCCCCGGGTCGTAGAACT+GGG | - | chr4.3:25330358-25330377 | None:intergenic | 65.0% | |
| TGGCCCCAGTTCTACGACCC+GGG | + | chr4.3:25330351-25330370 | MS.gene47572:CDS | 65.0% | |
| ! | GTTCTACGACCCGGGGGCAT+TGG | + | chr4.3:25330359-25330378 | MS.gene47572:CDS | 65.0% |
| CGACCAGGCTCTGCAGGCTG+GGG | + | chr4.3:25327704-25327723 | MS.gene47572:CDS | 70.0% | |
| GACCAGGCTCTGCAGGCTGG+GGG | + | chr4.3:25327705-25327724 | MS.gene47572:CDS | 70.0% | |
| GCCCCAGTTCTACGACCCGG+GGG | + | chr4.3:25330353-25330372 | MS.gene47572:CDS | 70.0% | |
| GCCCCCGGGTCGTAGAACTG+GGG | - | chr4.3:25330357-25330376 | None:intergenic | 70.0% | |
| GGCCCCAGTTCTACGACCCG+GGG | + | chr4.3:25330352-25330371 | MS.gene47572:CDS | 70.0% | |
| TACCCCCAGCCTGCAGAGCC+TGG | - | chr4.3:25327710-25327729 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 25327169 | 25331160 | 25327169 | ID=MS.gene47572 |
| chr4.3 | mRNA | 25327169 | 25331160 | 25327169 | ID=MS.gene47572.t1;Parent=MS.gene47572 |
| chr4.3 | exon | 25327169 | 25327399 | 25327169 | ID=MS.gene47572.t1.exon1;Parent=MS.gene47572.t1 |
| chr4.3 | CDS | 25327169 | 25327399 | 25327169 | ID=cds.MS.gene47572.t1;Parent=MS.gene47572.t1 |
| chr4.3 | exon | 25327597 | 25327746 | 25327597 | ID=MS.gene47572.t1.exon2;Parent=MS.gene47572.t1 |
| chr4.3 | CDS | 25327597 | 25327746 | 25327597 | ID=cds.MS.gene47572.t1;Parent=MS.gene47572.t1 |
| chr4.3 | exon | 25329996 | 25330494 | 25329996 | ID=MS.gene47572.t1.exon3;Parent=MS.gene47572.t1 |
| chr4.3 | CDS | 25329996 | 25330494 | 25329996 | ID=cds.MS.gene47572.t1;Parent=MS.gene47572.t1 |
| chr4.3 | exon | 25330607 | 25331160 | 25330607 | ID=MS.gene47572.t1.exon4;Parent=MS.gene47572.t1 |
| chr4.3 | CDS | 25330607 | 25331160 | 25330607 | ID=cds.MS.gene47572.t1;Parent=MS.gene47572.t1 |
| Gene Sequence |
| Protein sequence |
