AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47599

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47599.t1 MTR_3g075210 97.074 1572 46 0 1 1572 1 1572 0.0 3187
MS.gene47599.t1 MTR_1g094740 45.669 381 169 8 173 552 292 635 1.13e-98 350
MS.gene47599.t1 MTR_1g094740 53.571 168 72 2 1406 1568 1312 1478 1.38e-49 194
MS.gene47599.t1 MTR_1g094740 43.655 197 70 4 5 162 3 197 8.89e-39 159
MS.gene47599.t1 MTR_1g094740 37.600 125 74 3 766 889 700 821 2.55e-16 85.9
MS.gene47599.t1 MTR_5g029370 43.467 375 194 7 11 379 82 444 4.75e-81 286
MS.gene47599.t1 MTR_5g029370 43.467 375 194 7 11 379 82 444 4.75e-81 286
MS.gene47599.t1 MTR_1g038400 37.602 367 193 8 11 362 21 366 1.53e-66 237
MS.gene47599.t1 MTR_1g038370 37.677 353 178 8 18 362 8 326 1.25e-64 231
MS.gene47599.t1 MTR_2g047130 33.827 405 195 10 18 360 49 442 5.06e-54 207
MS.gene47599.t1 MTR_2g047130 33.827 405 195 10 18 360 52 445 5.53e-54 206
MS.gene47599.t1 MTR_8g089260 35.236 403 190 11 18 359 33 425 3.84e-52 201
MS.gene47599.t1 MTR_1g078070 33.245 379 171 11 18 330 150 512 2.04e-50 196
MS.gene47599.t1 MTR_1g078070 33.245 379 171 11 18 330 150 512 4.02e-50 196
MS.gene47599.t1 MTR_5g010300 36.992 246 135 5 129 359 328 568 1.02e-38 159
MS.gene47599.t1 MTR_5g010300 36.992 246 135 5 129 359 328 568 1.18e-38 159
MS.gene47599.t1 MTR_5g010300 36.992 246 135 5 129 359 328 568 1.59e-38 158
MS.gene47599.t1 MTR_5g010300 36.992 246 135 5 129 359 328 568 1.62e-38 158
MS.gene47599.t1 MTR_7g097070 27.446 419 213 8 18 359 117 521 2.50e-35 146
MS.gene47599.t1 MTR_7g407000 41.781 146 59 4 201 339 28 154 1.06e-27 110
MS.gene47599.t1 MTR_1g090763 47.656 128 28 3 15 142 1 89 2.69e-24 100
MS.gene47599.t1 MTR_1g090763 90.476 42 4 0 224 265 89 130 2.84e-19 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47599.t1 AT3G48430 59.475 686 212 13 1 643 3 665 0.0 767
MS.gene47599.t1 AT3G48430 54.762 252 107 2 753 997 724 975 1.45e-73 271
MS.gene47599.t1 AT3G48430 36.552 435 210 5 1177 1569 946 1356 4.89e-68 253
MS.gene47599.t1 AT5G04240 57.812 256 101 2 173 421 260 515 5.13e-94 334
MS.gene47599.t1 AT5G04240 66.055 109 37 0 1457 1565 1229 1337 3.61e-44 176
MS.gene47599.t1 AT5G04240 44.865 185 72 3 5 161 3 185 7.59e-38 156
MS.gene47599.t1 AT5G04240 33.333 102 68 0 763 864 647 748 2.44e-13 76.3
MS.gene47599.t1 AT5G46910 43.956 364 182 9 7 362 92 441 4.71e-79 276
MS.gene47599.t1 AT5G46910 43.956 364 182 9 7 362 92 441 4.94e-79 279
MS.gene47599.t1 AT3G48430 54.762 252 107 2 753 997 365 616 2.91e-75 272
MS.gene47599.t1 AT3G48430 36.552 435 210 5 1177 1569 587 997 4.85e-68 250
MS.gene47599.t1 AT3G48430 46.809 329 135 10 332 643 1 306 2.33e-66 245
MS.gene47599.t1 AT2G34880 31.974 466 260 11 18 435 61 517 5.95e-56 210
MS.gene47599.t1 AT1G30810 33.501 397 199 9 18 359 59 445 1.94e-50 194
MS.gene47599.t1 AT1G30810 33.501 397 199 9 18 359 59 445 1.94e-50 194
MS.gene47599.t1 AT1G30810 33.501 397 199 9 18 359 59 445 1.94e-50 194
MS.gene47599.t1 AT4G20400 31.592 402 207 10 18 360 56 448 3.88e-50 194
MS.gene47599.t1 AT4G20400 31.472 394 200 11 27 360 8 391 6.78e-48 187
MS.gene47599.t1 AT1G08620 37.979 287 149 8 97 359 264 545 3.38e-42 170
MS.gene47599.t1 AT1G08620 37.979 287 149 8 97 359 264 545 3.38e-42 170
MS.gene47599.t1 AT1G08620 37.979 287 149 8 97 359 264 545 3.38e-42 170
MS.gene47599.t1 AT1G08620 37.979 287 149 8 97 359 278 559 3.54e-42 170
MS.gene47599.t1 AT1G63490 34.915 295 168 6 110 392 314 596 1.57e-41 168
MS.gene47599.t1 AT1G63490 34.915 295 168 6 110 392 314 596 1.71e-41 168
MS.gene47599.t1 AT1G63490 34.915 295 168 6 110 392 61 343 2.88e-41 167
MS.gene47599.t1 AT2G38950 27.532 385 226 10 13 359 103 472 8.30e-34 141
MS.gene47599.t1 AT1G63490 34.146 123 81 0 270 392 15 137 1.45e-13 76.6

Find 373 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTCTTTGGCAAGGTTTC+TGG 0.062437 3.3:+64942257 None:intergenic
TTGCCTTAGCTTTGTGTTCT+AGG 0.070503 3.3:-64946719 MS.gene47599:intron
AGCTACAGCTCTTGCATTAT+TGG 0.121042 3.3:-64944773 MS.gene47599:CDS
CAGAATCCCTTATTGCTAAA+AGG 0.167612 3.3:+64943057 None:intergenic
CTCAGTTTCAGAGGATTCTT+TGG 0.208317 3.3:-64942514 MS.gene47599:CDS
TGAGATAGCCGTTGCAGTTT+TGG 0.217642 3.3:+64942959 None:intergenic
AACTTGCCTGCATACATATT+TGG 0.229273 3.3:+64945762 None:intergenic
TGCTTCCTCGTCCTCTGATT+TGG 0.231448 3.3:+64941486 None:intergenic
TGACTTTAACTGTCCTTCTT+TGG 0.234048 3.3:+64942193 None:intergenic
AGCTGGAGTGGGTCGGTATT+CGG 0.239347 3.3:+64950321 None:intergenic
GTTTAACGGGTCGGGGTTTA+CGG 0.251285 3.3:+64950119 None:intergenic
ACAGTTGGTGGCAGAAGATT+TGG 0.259584 3.3:-64943420 MS.gene47599:CDS
TTACATTCTGAAGGAGAAAA+TGG 0.266341 3.3:-64944805 MS.gene47599:CDS
AAGGCATTTGCTTGCTATAA+AGG 0.271415 3.3:+64943231 None:intergenic
CTCAGAATTGCATACATTAA+AGG 0.273462 3.3:+64946205 None:intergenic
GCTTCCTCGTCCTCTGATTT+GGG 0.282643 3.3:+64941487 None:intergenic
GAACTATATGTGGTGGAATA+AGG 0.282774 3.3:+64944469 None:intergenic
CTTCGTTTGGATTGTTTACT+TGG 0.289979 3.3:+64941814 None:intergenic
CTGTTTAACTGTCCTTCGTT+TGG 0.298489 3.3:+64941801 None:intergenic
ATCTTCCTCTGCTACACATT+TGG 0.302212 3.3:+64942164 None:intergenic
GGTTCTATCGGTGAGCTTGC+TGG 0.305490 3.3:+64943170 None:intergenic
CAGAATGTAAAGCCTCTTCT+TGG 0.307412 3.3:+64944818 None:intergenic
CGATGATAAGGATGTGGTTT+TGG 0.308284 3.3:-64942874 MS.gene47599:CDS
GAAAATCCAGGGTTCACTTT+TGG 0.312344 3.3:+64946227 None:intergenic
AGTTTATTGCATTTGATTCA+TGG 0.317217 3.3:+64944701 None:intergenic
TAGCTTGAATTATCTTCATA+TGG 0.324265 3.3:-64949702 MS.gene47599:CDS
AACGGGTCGTTTAACGGGTC+GGG 0.324518 3.3:+64950111 None:intergenic
TTGCTTCTAACAAACCTTCT+TGG 0.326399 3.3:+64942819 None:intergenic
CAGTTGGTGGCAGAAGATTT+GGG 0.328325 3.3:-64943419 MS.gene47599:CDS
AATGATTGGGTTGCTGCCTC+TGG 0.335272 3.3:-64945840 MS.gene47599:CDS
CAGGATTATAAAATCACTTC+AGG 0.339815 3.3:-64944520 MS.gene47599:CDS
ATTGCAGCTTCTTTAATGAT+TGG 0.342556 3.3:-64945854 MS.gene47599:CDS
GAAAACGAAGCTTCCAAATT+CGG 0.342654 3.3:-64950262 MS.gene47599:CDS
GCCCTTCTCTGATAAACCTT+TGG 0.343862 3.3:+64943149 None:intergenic
GCTGGAGTGGGTCGGTATTC+GGG 0.344330 3.3:+64950322 None:intergenic
GAGGATGTTGTTCGAGTTCA+TGG 0.345002 3.3:-64949629 MS.gene47599:CDS
ATAGTCGGCATGCTTGCTTC+TGG 0.346214 3.3:+64942458 None:intergenic
AATATGTGGGCTCCACCTAT+TGG 0.348646 3.3:+64944289 None:intergenic
CTGCCAAACGGGTCGTTTAA+CGG 0.352117 3.3:+64950105 None:intergenic
GTCTTTCCATACAGAATCCC+TGG 0.354152 3.3:-64946458 MS.gene47599:intron
AGACATCTTGCAACCCTTCC+AGG 0.356231 3.3:+64941291 None:intergenic
CGGGAATATGTGCATCTTCA+TGG 0.360471 3.3:+64945787 None:intergenic
AAGGGCTGACAAGCAGAAAA+AGG 0.360982 3.3:-64943132 MS.gene47599:CDS
GTTTCACTGGCTGAGGTGTC+TGG 0.361129 3.3:+64941746 None:intergenic
TATTGTCATGGGATTATCAT+TGG 0.361840 3.3:+64944642 None:intergenic
TTGAAATAGAGACATTGTTC+TGG 0.363659 3.3:-64949985 MS.gene47599:CDS
AGGCATTTGCTTGCTATAAA+GGG 0.366029 3.3:+64943232 None:intergenic
CAGAGAGCCTAGTATAGATA+TGG 0.366985 3.3:-64941653 MS.gene47599:CDS
TGCTGCATAGAACCCCTAAA+AGG 0.368234 3.3:-64941924 MS.gene47599:CDS
CGGGTGGTGAATGTGGAGTT+GGG 0.369369 3.3:+64950166 None:intergenic
TTGCAGCTTCTTTAATGATT+GGG 0.373829 3.3:-64945853 MS.gene47599:CDS
AGAATCCCTTATTGCTAAAA+GGG 0.374579 3.3:+64943058 None:intergenic
TTCTGAGCTCCTCGTTTCAC+TGG 0.377100 3.3:+64941733 None:intergenic
AGCAAGCATGCCGACTATAT+TGG 0.377154 3.3:-64942453 MS.gene47599:CDS
TACATCACTTTCAGTGCAAT+TGG 0.379183 3.3:+64942710 None:intergenic
AGTTGGGGAATGAACGGTTT+AGG 0.379208 3.3:+64950182 None:intergenic
CCGGGTGGTGAATGTGGAGT+TGG 0.386213 3.3:+64950165 None:intergenic
CACAGAGTAGACGGCGAATC+AGG 0.387784 3.3:-64942908 MS.gene47599:CDS
AGTTTGAAGCCAAAGCAAAA+TGG 0.390789 3.3:-64950057 MS.gene47599:CDS
ATGACTGAACCCCGTGTGAT+AGG 0.400447 3.3:+64947021 None:intergenic
ATATGTGGGCTCCACCTATT+GGG 0.405980 3.3:+64944290 None:intergenic
AAACCTTCTTGGCCGAGGAC+TGG 0.407990 3.3:+64942830 None:intergenic
TTTAACGGGTCGGGGTTTAC+GGG 0.407994 3.3:+64950120 None:intergenic
GTTGTTCGAGTTCATGGTTA+TGG 0.408380 3.3:-64949623 MS.gene47599:CDS
CGAGTCTCGGGAATGGGGAC+TGG 0.410037 3.3:-64943307 MS.gene47599:CDS
TCTGTTATATATTATGCATT+CGG 0.414294 3.3:-64943203 MS.gene47599:CDS
GAGCAGCAACTCCGCCCAAT+AGG 0.415857 3.3:-64944304 MS.gene47599:CDS
CGTCGCTGCTTCTGCTTGTT+CGG 0.416277 3.3:+64942303 None:intergenic
TGCCAAACGGGTCGTTTAAC+GGG 0.419426 3.3:+64950106 None:intergenic
ATTTCTGTGTGCTTCATAGC+TGG 0.420808 3.3:+64944588 None:intergenic
AGGAAGCGAGTCTCGGGAAT+GGG 0.420824 3.3:-64943313 MS.gene47599:CDS
TGAAATGTCTGATGATCAAC+TGG 0.421001 3.3:-64942049 MS.gene47599:CDS
ACAGGCAAACCAAAAGGAAA+AGG 0.421225 3.3:-64941549 MS.gene47599:CDS
GTCTGACACAGTATCCTCTT+TGG 0.423034 3.3:+64942245 None:intergenic
CTCTGTTGTGCGAAGGGAAG+GGG 0.423490 3.3:-64946079 MS.gene47599:CDS
TCCTCTGAAGTGCCCCTGGA+AGG 0.425256 3.3:-64941305 MS.gene47599:CDS
CTGTGCTTCAGCCTCTATCT+TGG 0.427331 3.3:+64943439 None:intergenic
TGAGAAAAGTTTACGTGGAT+TGG 0.430240 3.3:-64943021 MS.gene47599:CDS
TGTTTAATGCGCCTGCTCCT+AGG 0.430876 3.3:+64941994 None:intergenic
GTTTATGAAGGAGGAGATAC+CGG 0.430876 3.3:-64949801 MS.gene47599:CDS
GCAACGGCTATCTCAAAATC+AGG 0.431373 3.3:-64942951 MS.gene47599:CDS
TGCAATTTCTGATGACCATA+TGG 0.433765 3.3:-64942424 MS.gene47599:CDS
GGTCGGTATTCGGGTGCTAC+TGG 0.434393 3.3:+64950331 None:intergenic
CATATCTATACTAGGCTCTC+TGG 0.434737 3.3:+64941654 None:intergenic
ATCAGGTTAGTGCAAAATGC+TGG 0.441407 3.3:-64947070 MS.gene47599:intron
GTGGTTGTCAGAAGCAGAAA+AGG 0.442099 3.3:-64942398 MS.gene47599:CDS
TAAAGTTTGGATGTCTAATC+AGG 0.442290 3.3:-64943087 MS.gene47599:CDS
TGAAGTTGTTTAGAACTTGA+AGG 0.442627 3.3:+64946023 None:intergenic
TGATGTGAAAATTGAGAGAT+TGG 0.445236 3.3:-64942991 MS.gene47599:CDS
GCAAATGGTGTGGTAAAGTT+TGG 0.446554 3.3:-64943100 MS.gene47599:CDS
ATGATTGCATGCAAAATAGA+TGG 0.448090 3.3:-64942665 MS.gene47599:CDS
CATACATTAAAGGAAAATCC+AGG 0.448577 3.3:+64946215 None:intergenic
TCAGAGGATTCTTTGGATGT+TGG 0.450445 3.3:-64942507 MS.gene47599:CDS
CAAAATTACGTGTTGGATGC+CGG 0.453736 3.3:-64946253 MS.gene47599:CDS
TCCTATCAAAGGCATAAAAC+AGG 0.454935 3.3:-64942114 MS.gene47599:CDS
GTAATTTGAGTCATCATCCT+TGG 0.455012 3.3:-64944561 MS.gene47599:CDS
ATAAAACAGGTATTTCTAGA+AGG 0.455035 3.3:-64942101 MS.gene47599:CDS
TGTAATGTCTGACGACCAAT+TGG 0.458204 3.3:-64942142 MS.gene47599:CDS
AACCTTCTTGGCCGAGGACT+GGG 0.459997 3.3:+64942831 None:intergenic
GGGAATATGTGCATCTTCAT+GGG 0.460186 3.3:+64945788 None:intergenic
TGGTCCCCACTCTGCCAAAC+GGG 0.460956 3.3:+64950094 None:intergenic
GCGCAGGCGTCCCATGCTGC+AGG 0.461981 3.3:-64948287 MS.gene47599:intron
AGCTTGAATTATCTTCATAT+GGG 0.462001 3.3:-64949701 MS.gene47599:CDS
ATCTTTATCAAGTATTGTCA+TGG 0.463045 3.3:+64944630 None:intergenic
TTGCTAAAGATGCTGCTATT+CGG 0.464523 3.3:-64946797 MS.gene47599:CDS
ACAAATATCTGGTGCAGCAC+CGG 0.464920 3.3:-64941348 MS.gene47599:CDS
GTCTTTGTTGAGGTTTATGA+AGG 0.464982 3.3:-64949813 MS.gene47599:CDS
GAAAGGAAATTTCGATGATA+AGG 0.465578 3.3:-64942886 MS.gene47599:CDS
CTTCCGTTGCGAATAGTGCT+TGG 0.465767 3.3:-64949865 MS.gene47599:CDS
TACTCTGTTGTGCGAAGGGA+AGG 0.468064 3.3:-64946081 MS.gene47599:CDS
AGTGATATCAGACGACCAAC+TGG 0.468870 3.3:-64942328 MS.gene47599:CDS
GAGAAACATCTGTCCAGTAC+AGG 0.470283 3.3:-64941395 MS.gene47599:CDS
AGAACCCGATCTGTTGTTGC+CGG 0.470408 3.3:+64950146 None:intergenic
ATCTTGAAAATGTATGCGAT+TGG 0.470454 3.3:+64950286 None:intergenic
GTGGTCCCCACTCTGCCAAA+CGG 0.473352 3.3:+64950093 None:intergenic
ACCGGGAGTTACTTCGCCTA+TGG 0.476123 3.3:-64949783 MS.gene47599:CDS
CAGGCAAACCAAAAGGAAAA+GGG 0.476390 3.3:-64941548 MS.gene47599:CDS
TAATTTGAGTCATCATCCTT+GGG 0.476520 3.3:-64944560 MS.gene47599:CDS
CCTGCGCTAATAAACACTTC+TGG 0.476544 3.3:+64948303 None:intergenic
TCTCAAAATCAGGCAGGAAA+AGG 0.477082 3.3:-64942941 MS.gene47599:CDS
CCTTATGCATGTGCCGAGCC+AGG 0.478103 3.3:-64941214 MS.gene47599:CDS
AGAATGTAAAGCCTCTTCTT+GGG 0.478762 3.3:+64944819 None:intergenic
CCTGCATACATATTTGGCTC+GGG 0.478982 3.3:+64945768 None:intergenic
TTTGTTGAGGTTTATGAAGG+AGG 0.479055 3.3:-64949810 MS.gene47599:CDS
GAGGGACTGAATTCATCAAA+AGG 0.479424 3.3:-64946185 MS.gene47599:CDS
GCATTATTGGCTTCAGCGTA+TGG 0.479451 3.3:-64944760 MS.gene47599:CDS
TCTGACAACCACTCTCCATA+TGG 0.479877 3.3:+64942409 None:intergenic
CAAAAGACAGGCAAACCAAA+AGG 0.480752 3.3:-64941555 MS.gene47599:CDS
ATTTCCTCGTTGGATGCAAA+TGG 0.481646 3.3:-64946056 MS.gene47599:CDS
TGTGCTTCAGCCTCTATCTT+GGG 0.482658 3.3:+64943440 None:intergenic
TCCTCTTCCATATCTATACT+AGG 0.483648 3.3:+64941646 None:intergenic
AAACCTCAACAAAGACCCTT+TGG 0.483798 3.3:+64949820 None:intergenic
AAAGAGAGTCTCAAAAGCTC+AGG 0.483948 3.3:-64941593 MS.gene47599:CDS
ATTGGATCTTCGAATTCAGC+TGG 0.485757 3.3:+64950304 None:intergenic
GTTGCTGCCTCTGGATTACC+TGG 0.486133 3.3:-64945831 MS.gene47599:CDS
ACGGGTCGTTTAACGGGTCG+GGG 0.487627 3.3:+64950112 None:intergenic
ACCGTCCTCTGAAGTGCCCC+TGG 0.487673 3.3:-64941309 MS.gene47599:CDS
TTCAATAAACTATTCTCCCA+TGG 0.488427 3.3:-64946769 MS.gene47599:CDS
GGAATATGAGAAGGGTTTCA+AGG 0.488441 3.3:-64949844 MS.gene47599:CDS
CCTCACTATCCAGAGCTGAC+TGG 0.488465 3.3:+64943333 None:intergenic
ACGGTTTAGGTTAGAGATGG+TGG 0.490269 3.3:+64950195 None:intergenic
GACCCGTTAAACGACCCGTT+TGG 0.490842 3.3:-64950108 MS.gene47599:CDS
TAAAGCAGCCGTCTCATTTG+CGG 0.492874 3.3:-64941696 MS.gene47599:CDS
TACCTAGCTGCTGGCTCTCT+AGG 0.494577 3.3:+64945891 None:intergenic
AACCCCGTGTGATAGGCTCT+TGG 0.495021 3.3:+64947028 None:intergenic
TTAGCATACTCAACAGAAAA+CGG 0.495110 3.3:+64949944 None:intergenic
CTGATGATCTGGTATTCGAC+AGG 0.496383 3.3:-64946154 MS.gene47599:CDS
GAAAAGGATCCAGTCAGCTC+TGG 0.496531 3.3:-64943342 MS.gene47599:CDS
GGTGGAGAGATTAACCCTCT+TGG 0.496887 3.3:-64949602 MS.gene47599:intron
CTCTTTCTAAGGCGTGTACT+AGG 0.497241 3.3:+64941610 None:intergenic
TGATAAACCTTTGGTTCTAT+CGG 0.497751 3.3:+64943158 None:intergenic
GAAGTTGTTTAGAACTTGAA+GGG 0.498994 3.3:+64946024 None:intergenic
CTATTCGCAACGGAAGAAAA+CGG 0.499162 3.3:+64949872 None:intergenic
TTGGAAGAAGGTGGAAAAGG+AGG 0.501756 3.3:+64950223 None:intergenic
TGTTAGAAGCAAGCAAGCTA+AGG 0.501831 3.3:-64942808 MS.gene47599:CDS
CCAGAAGTGTTTATTAGCGC+AGG 0.502690 3.3:-64948303 MS.gene47599:CDS
TCAGGTTAGTGCAAAATGCT+GGG 0.503368 3.3:-64947069 MS.gene47599:intron
AGATGTCTTTCAAGTGGGCA+TGG 0.505702 3.3:-64941276 MS.gene47599:CDS
GCCTGCATACATATTTGGCT+CGG 0.507051 3.3:+64945767 None:intergenic
TGGAAGAAGGTGGAAAAGGA+GGG 0.507150 3.3:+64950224 None:intergenic
AACCAAAGGTTTATCAGAGA+AGG 0.509771 3.3:-64943151 MS.gene47599:CDS
CCTGGCTCGGCACATGCATA+AGG 0.511486 3.3:+64941214 None:intergenic
GGTGCTTCTAAGACTTGGTA+TGG 0.513084 3.3:-64949680 MS.gene47599:CDS
CTGAAGTAAAATCAAAAGAC+AGG 0.514333 3.3:-64941567 MS.gene47599:CDS
CTCAGATTATCCCAAGATAG+AGG 0.516424 3.3:-64943450 MS.gene47599:intron
CCCGAGCCAAATATGTATGC+AGG 0.516655 3.3:-64945768 MS.gene47599:intron
ATATGGGTGCTTCTAAGACT+TGG 0.517550 3.3:-64949685 MS.gene47599:CDS
AATGATCTGCTTCATGTCCT+CGG 0.517689 3.3:-64946332 MS.gene47599:CDS
AAACGGGTCGTTTAACGGGT+CGG 0.519347 3.3:+64950110 None:intergenic
AATTAAAGAACTATTTGTCC+AGG 0.520071 3.3:-64946369 MS.gene47599:CDS
AGGGAAGGGGATTTCCTCGT+TGG 0.520314 3.3:-64946066 MS.gene47599:CDS
CTTTAATGTATGCAATTCTG+AGG 0.520395 3.3:-64946204 MS.gene47599:CDS
AAAGAAGGACAGTTAAAGTC+AGG 0.522037 3.3:-64942191 MS.gene47599:CDS
CATAGCTGGCACTCTCTGAA+AGG 0.522886 3.3:+64944602 None:intergenic
CGAACAAGCAGAAGCAGCGA+CGG 0.523677 3.3:-64942302 MS.gene47599:CDS
GCATGTGCCGAGCCAGGTTG+TGG 0.524672 3.3:-64941208 MS.gene47599:CDS
AAATGATGTTGCAGCTGCAA+AGG 0.524881 3.3:-64941524 MS.gene47599:CDS
TCGACTTAAAGATAAGAAGA+AGG 0.525185 3.3:-64946408 MS.gene47599:CDS
CCCTTCCAGGGGCACTTCAG+AGG 0.525481 3.3:+64941304 None:intergenic
ATCTGTCCAGTACAGGGTTG+CGG 0.525611 3.3:-64941388 MS.gene47599:CDS
GACATAAGATACCTAGCTGC+TGG 0.526060 3.3:+64945882 None:intergenic
GCCTAGTATAGATATGGAAG+AGG 0.527237 3.3:-64941647 MS.gene47599:CDS
TCTTTCCATACAGAATCCCT+GGG 0.527795 3.3:-64946457 MS.gene47599:intron
AGAATATCAGTGTGACATTG+AGG 0.528446 3.3:-64941464 MS.gene47599:CDS
AAAGGAGAATTGCTAAAAGC+TGG 0.528576 3.3:-64942380 MS.gene47599:CDS
CCTCTGAAGTGCCCCTGGAA+GGG 0.528920 3.3:-64941304 MS.gene47599:CDS
TCTTTATCAAGTATTGTCAT+GGG 0.529851 3.3:+64944631 None:intergenic
TTTGATAGGAAACCTCCAAT+TGG 0.531313 3.3:+64942127 None:intergenic
AACGACCCGTTTGGCAGAGT+GGG 0.531374 3.3:-64950099 MS.gene47599:CDS
AAAGATAAGAAGAAGGGTGA+AGG 0.531755 3.3:-64946401 MS.gene47599:CDS
GATAGTGAGGAAGCGAGTCT+CGG 0.532216 3.3:-64943320 MS.gene47599:CDS
GGGCTGCATTTGAAAATACA+AGG 0.532249 3.3:-64944498 MS.gene47599:CDS
AAAAGGTTGTTGCTGGCAAA+TGG 0.533727 3.3:-64943115 MS.gene47599:CDS
GGGCCAAAGGGTCTTTGTTG+AGG 0.534359 3.3:-64949823 MS.gene47599:CDS
CTCCTTGGTGCCATGCCTGT+AGG 0.534813 3.3:+64943370 None:intergenic
AGAGAGAGACTCAGTTTCAG+AGG 0.534848 3.3:-64942523 MS.gene47599:CDS
ATAGTGAGGAAGCGAGTCTC+GGG 0.535074 3.3:-64943319 MS.gene47599:CDS
AAAGCAACAGCAGCATCTCT+AGG 0.535968 3.3:+64949653 None:intergenic
TCTGCTTGTTCGGCTCCAGT+TGG 0.536707 3.3:+64942313 None:intergenic
GGGGAATCAGTGCGGCACCT+CGG 0.538427 3.3:-64946436 MS.gene47599:CDS
TCCTCAAAAGATTGATCCCA+AGG 0.538519 3.3:+64944544 None:intergenic
CCCTTATTGCTAAAAGGGGA+TGG 0.538532 3.3:+64943063 None:intergenic
TAATATATAACAGAATTGTA+AGG 0.539019 3.3:+64943212 None:intergenic
AAAATTAGTACCTGCAGCAT+GGG 0.539123 3.3:+64948277 None:intergenic
TGTTTGACCACAACCTGGCT+CGG 0.539843 3.3:+64941201 None:intergenic
AACCCAGTCCTCGGCCAAGA+AGG 0.539855 3.3:-64942833 MS.gene47599:CDS
AAATTTCGATGATAAGGATG+TGG 0.540342 3.3:-64942880 MS.gene47599:CDS
TGATTCTGATTGTAATCGAA+TGG 0.540612 3.3:-64942577 MS.gene47599:CDS
ACCAAAGGTTTATCAGAGAA+GGG 0.540691 3.3:-64943150 MS.gene47599:CDS
CTCAGCGTCATTAGTATCAC+GGG 0.542261 3.3:+64944447 None:intergenic
GAGGAAGCGAGTCTCGGGAA+TGG 0.542548 3.3:-64943314 MS.gene47599:CDS
ATTATTATTCTCCACCGTGT+CGG 0.543651 3.3:+64949898 None:intergenic
AATTTACTCTGTTGTGCGAA+GGG 0.543900 3.3:-64946085 MS.gene47599:CDS
ATAGCTGGCACTCTCTGAAA+GGG 0.543955 3.3:+64944603 None:intergenic
ATCTTCGAATTCAGCTGGAG+TGG 0.545061 3.3:+64950309 None:intergenic
AGTGAGACTAGTCAAGGAGA+TGG 0.545747 3.3:-64945987 MS.gene47599:CDS
CAGCAACTCCGCCCAATAGG+TGG 0.545927 3.3:-64944301 MS.gene47599:CDS
AATTGGAGGTTTCCTATCAA+AGG 0.546356 3.3:-64942125 MS.gene47599:CDS
CCACCCGGCAACAACAGATC+GGG 0.547902 3.3:-64950150 MS.gene47599:CDS
ACCATAGGCGAAGTAACTCC+CGG 0.548529 3.3:+64949782 None:intergenic
AAGAATATTGCCTACAGGCA+TGG 0.549016 3.3:-64943380 MS.gene47599:CDS
GAATATCAGTGTGACATTGA+GGG 0.550459 3.3:-64941463 MS.gene47599:CDS
CTGAATGTTTGACCACAACC+TGG 0.550627 3.3:+64941196 None:intergenic
ATATTGCTCTTATGTCATCC+AGG 0.551709 3.3:-64944271 MS.gene47599:intron
TCTGAGGAAGATGCAGTTGA+CGG 0.551931 3.3:-64944724 MS.gene47599:CDS
AGAGGCTGAAGCACAGTTGG+TGG 0.552173 3.3:-64943432 MS.gene47599:CDS
ACCACCCGGCAACAACAGAT+CGG 0.553221 3.3:-64950151 MS.gene47599:CDS
GCTCCTCGTTTCACTGGCTG+AGG 0.553863 3.3:+64941739 None:intergenic
AGTTGCTCAAAATTACGTGT+TGG 0.554274 3.3:-64946260 MS.gene47599:CDS
GTATTCGGGTGCTACTGGCA+TGG 0.554461 3.3:+64950336 None:intergenic
AGTCGTCATAAGCGAAAGAC+TGG 0.554927 3.3:-64941157 MS.gene47599:CDS
CTTCGAGTCAAAAGAAGAGT+TGG 0.555347 3.3:-64941428 MS.gene47599:CDS
GATGTCTTTCAAGTGGGCAT+GGG 0.555556 3.3:-64941275 MS.gene47599:CDS
CGTGGAAGAATATTGCCTAC+AGG 0.555811 3.3:-64943385 MS.gene47599:CDS
AGGATTATAAAATCACTTCA+GGG 0.555818 3.3:-64944519 MS.gene47599:CDS
TGAGTATGCTAATGATATGC+CGG 0.556873 3.3:-64949933 MS.gene47599:CDS
GCACCAAGGAGGATGAGAAA+AGG 0.556987 3.3:-64943358 MS.gene47599:CDS
GAATCCCTTATTGCTAAAAG+GGG 0.557083 3.3:+64943059 None:intergenic
TTTATGAAGGAGGAGATACC+GGG 0.558280 3.3:-64949800 MS.gene47599:CDS
GCAAGCCAAATGTGTAGCAG+AGG 0.559692 3.3:-64942169 MS.gene47599:CDS
AGCCAGAAACCTTGCCAAAG+AGG 0.559819 3.3:-64942259 MS.gene47599:CDS
TCCAGGGGCACTTCAGAGGA+CGG 0.560776 3.3:+64941308 None:intergenic
GAATTTACTCTGTTGTGCGA+AGG 0.561208 3.3:-64946086 MS.gene47599:CDS
CAATCCCAAATCAGAGGACG+AGG 0.561283 3.3:-64941491 MS.gene47599:CDS
GATATGGAAGAGGATGAAGA+AGG 0.562042 3.3:-64941637 MS.gene47599:CDS
TTTAATGTATGCAATTCTGA+GGG 0.563864 3.3:-64946203 MS.gene47599:CDS
GAACCCGATCTGTTGTTGCC+GGG 0.564037 3.3:+64950147 None:intergenic
TAACTGTAAATGTGAAACCA+TGG 0.564574 3.3:+64946752 None:intergenic
GATAGAGGCTGAAGCACAGT+TGG 0.566351 3.3:-64943435 MS.gene47599:CDS
GAAGAGGCTTTACATTCTGA+AGG 0.567429 3.3:-64944814 MS.gene47599:CDS
TAAATTTGCTGGCAATGAAG+TGG 0.567601 3.3:-64942622 MS.gene47599:CDS
CGACTTAAAGATAAGAAGAA+GGG 0.568710 3.3:-64946407 MS.gene47599:CDS
ACACAGTATCCTCTTTGGCA+AGG 0.570451 3.3:+64942250 None:intergenic
CTGAAGATAAACCCAGTCCT+CGG 0.570588 3.3:-64942842 MS.gene47599:CDS
TGAACGGTTTAGGTTAGAGA+TGG 0.571015 3.3:+64950192 None:intergenic
GACATTGTTCTGGAAAGCTA+CGG 0.571679 3.3:-64949975 MS.gene47599:CDS
GACATCTTGCAACCCTTCCA+GGG 0.573074 3.3:+64941292 None:intergenic
TTGGTTTGCTTGGCATGTGG+AGG 0.573444 3.3:-64949738 MS.gene47599:CDS
GCTAAGGGTGTTGAGAAAGA+TGG 0.574807 3.3:-64942792 MS.gene47599:CDS
GTAACCATGGCAGAATCAAA+CGG 0.575764 3.3:-64950382 None:intergenic
AGAATTGCTAAAAGCTGGCA+AGG 0.575907 3.3:-64942375 MS.gene47599:CDS
TCTTCGAATTCAGCTGGAGT+GGG 0.577536 3.3:+64950310 None:intergenic
CTAACAAACCTTCTTGGCCG+AGG 0.578907 3.3:+64942825 None:intergenic
AACTGTAAATGTGAAACCAT+GGG 0.579056 3.3:+64946753 None:intergenic
ATCGTCGCAAGTACCAAAGA+AGG 0.579741 3.3:-64942206 MS.gene47599:CDS
GGCATTTGCTTGCTATAAAG+GGG 0.579816 3.3:+64943233 None:intergenic
GGGTTCTGCTTTCGCCGACA+CGG 0.580649 3.3:-64949912 MS.gene47599:CDS
AGAAGGGTTTCAAGGGCCAA+AGG 0.580940 3.3:-64949836 MS.gene47599:CDS
GAAGGGTTTCAAGGGCCAAA+GGG 0.582136 3.3:-64949835 MS.gene47599:CDS
GTTAGAAGCAAGCAAGCTAA+GGG 0.582982 3.3:-64942807 MS.gene47599:CDS
AAGGGATTCTGAAGATGTTG+AGG 0.583166 3.3:-64943045 MS.gene47599:CDS
AAACGACCCGTTTGGCAGAG+TGG 0.583344 3.3:-64950100 MS.gene47599:CDS
AATGTCTGACGACCAATTGG+AGG 0.583608 3.3:-64942139 MS.gene47599:CDS
CGGCTATCTCAAAATCAGGC+AGG 0.583738 3.3:-64942947 MS.gene47599:CDS
GAATATGAGAAGGGTTTCAA+GGG 0.584938 3.3:-64949843 MS.gene47599:CDS
TATCACACGGGGTTCAGTCA+TGG 0.585020 3.3:-64947019 MS.gene47599:intron
TGCATCTTCACCAATATAGT+CGG 0.585183 3.3:+64942443 None:intergenic
AGTATCACGGGAACTATATG+TGG 0.589203 3.3:+64944459 None:intergenic
TTTAGCAACTCTCAACCACT+CGG 0.591491 3.3:+64946812 None:intergenic
TTGTTGCCGGGTGGTGAATG+TGG 0.591831 3.3:+64950159 None:intergenic
ATTTGGGGATTGATTGTACG+TGG 0.594727 3.3:-64943403 MS.gene47599:CDS
CTGGAAGTCATTCTGTGCAA+CGG 0.595577 3.3:+64942477 None:intergenic
ACTCTGTTGTGCGAAGGGAA+GGG 0.595674 3.3:-64946080 MS.gene47599:CDS
GGGGACTGGACTGTAAAGCT+AGG 0.595731 3.3:-64943293 MS.gene47599:CDS
GTCGCCGTTTGATTCTGCCA+TGG 0.596562 3.3:+64950378 None:intergenic
TCTCAGCGTCATTAGTATCA+CGG 0.596892 3.3:+64944446 None:intergenic
CTGGTATTCGACAGGAATCG+CGG 0.597369 3.3:-64946146 MS.gene47599:CDS
GGGTGGTGAATGTGGAGTTG+GGG 0.597584 3.3:+64950167 None:intergenic
GTTGCAAGATGTCTTTCAAG+TGG 0.598217 3.3:-64941282 MS.gene47599:CDS
CTAAAGATGCTGCTATTCGG+AGG 0.598518 3.3:-64946794 MS.gene47599:CDS
AGAAACATCTGTCCAGTACA+GGG 0.599754 3.3:-64941394 MS.gene47599:CDS
CGAATTCAGCTGGAGTGGGT+CGG 0.600042 3.3:+64950314 None:intergenic
GCAGTATATTTATTGCTACC+AGG 0.600218 3.3:+64945813 None:intergenic
GATGTGAAAATTGAGAGATT+GGG 0.600806 3.3:-64942990 MS.gene47599:CDS
AAGTTGTTTAGAACTTGAAG+GGG 0.601685 3.3:+64946025 None:intergenic
ATAGTGCTTGGAATATGAGA+AGG 0.601813 3.3:-64949853 MS.gene47599:CDS
TAGTGCTTGGAATATGAGAA+GGG 0.603160 3.3:-64949852 MS.gene47599:CDS
ATGTGGAGTTGGGGAATGAA+CGG 0.603635 3.3:+64950176 None:intergenic
TAGTTGGTTTGCTTGGCATG+TGG 0.608009 3.3:-64949741 MS.gene47599:CDS
TTGCAAGATGTCTTTCAAGT+GGG 0.608496 3.3:-64941281 MS.gene47599:CDS
GTGTCGGCGAAAGCAGAACC+CGG 0.609022 3.3:+64949914 None:intergenic
TAAAGATGCTGCTATTCGGA+GGG 0.609142 3.3:-64946793 MS.gene47599:CDS
AGTTGGTGGCAGAAGATTTG+GGG 0.609573 3.3:-64943418 MS.gene47599:CDS
GGAAGCGAGTCTCGGGAATG+GGG 0.610943 3.3:-64943312 MS.gene47599:CDS
AGTAGACGGCGAATCAGGAA+AGG 0.611933 3.3:-64942903 MS.gene47599:CDS
AAACAACCTCACAGAGTAGA+CGG 0.613019 3.3:-64942917 MS.gene47599:CDS
CCAGTCAGCTCTGGATAGTG+AGG 0.614111 3.3:-64943333 MS.gene47599:CDS
GACGGAGTAATCCTAAAAGT+AGG 0.614883 3.3:-64942284 MS.gene47599:CDS
AGCTTGCAATCCCAAATCAG+AGG 0.615064 3.3:-64941497 MS.gene47599:CDS
AAACCTAGAACACAAAGCTA+AGG 0.615764 3.3:+64946716 None:intergenic
AAGGAAGAAAGCTAAATGCA+AGG 0.618993 3.3:-64941905 MS.gene47599:CDS
ACATGCATAAGGTCGTGCAC+CGG 0.619919 3.3:+64941225 None:intergenic
ACGACCCGTTTGGCAGAGTG+GGG 0.620086 3.3:-64950098 MS.gene47599:CDS
GAGTATGCTAATGATATGCC+GGG 0.620199 3.3:-64949932 MS.gene47599:CDS
TGTTTACTCCGCAAATGAGA+CGG 0.622409 3.3:+64941688 None:intergenic
ATCACGGGAACTATATGTGG+TGG 0.623085 3.3:+64944462 None:intergenic
CCAACTCCACATTCACCACC+CGG 0.626710 3.3:-64950165 MS.gene47599:CDS
GTTCGAGTTCATGGTTATGG+TGG 0.628777 3.3:-64949620 MS.gene47599:CDS
ATACATTAAAGGAAAATCCA+GGG 0.629109 3.3:+64946216 None:intergenic
AGCCTAGAGAGCCAGCAGCT+AGG 0.638707 3.3:-64945893 MS.gene47599:CDS
TTAACGGGTCGGGGTTTACG+GGG 0.639176 3.3:+64950121 None:intergenic
AGTGAAAGTGAGACTAGTCA+AGG 0.640440 3.3:-64945993 MS.gene47599:CDS
CAGGTTAGTGCAAAATGCTG+GGG 0.642376 3.3:-64947068 MS.gene47599:CDS
TGCCTACAGGCATGGCACCA+AGG 0.644856 3.3:-64943372 MS.gene47599:CDS
TTTCCAAGAGCCTATCACAC+GGG 0.645520 3.3:-64947031 MS.gene47599:CDS
TAGAACACAAAGCTAAGGCA+AGG 0.645611 3.3:+64946721 None:intergenic
AGCATAGCAAGATAAACCAT+AGG 0.650448 3.3:+64949767 None:intergenic
ATGACATAAGAGCAATATGT+GGG 0.650529 3.3:+64944276 None:intergenic
GGTGTGAACTCGAATATGCT+CGG 0.651079 3.3:+64941246 None:intergenic
AAGATGGTGCAGCTTTGCAG+AGG 0.651138 3.3:-64942776 MS.gene47599:CDS
AAGAGTGAAACTAACCAAGA+GGG 0.652522 3.3:+64949588 None:intergenic
GGTCATCTTCATGAACTCGC+CGG 0.653793 3.3:+64941329 None:intergenic
TGGAAGTTCTTCTGACTCTG+AGG 0.655083 3.3:-64944740 MS.gene47599:CDS
AAGCTCACCGATAGAACCAA+AGG 0.655614 3.3:-64943165 MS.gene47599:CDS
GACGACTCTTCATCGCATTG+TGG 0.657016 3.3:+64944367 None:intergenic
CGGCCACCAAAAGTGAACCC+TGG 0.659021 3.3:-64946233 MS.gene47599:CDS
GATGACATAAGAGCAATATG+TGG 0.659855 3.3:+64944275 None:intergenic
GCTTGCTATAAAGGGGAGAG+CGG 0.659886 3.3:+64943240 None:intergenic
TTCTGCTTTCGCCGACACGG+TGG 0.660416 3.3:-64949909 MS.gene47599:CDS
GGAATATGTGCATCTTCATG+GGG 0.661725 3.3:+64945789 None:intergenic
TGTGGGCTCCACCTATTGGG+CGG 0.661848 3.3:+64944293 None:intergenic
TGAGAAGTCATTGTCAATCG+AGG 0.663543 3.3:-64944428 MS.gene47599:CDS
GGCTGCATTTGAAAATACAA+GGG 0.665040 3.3:-64944497 MS.gene47599:CDS
ATTCCAAGCACTATTCGCAA+CGG 0.666128 3.3:+64949862 None:intergenic
CCCGATCTGTTGTTGCCGGG+TGG 0.666514 3.3:+64950150 None:intergenic
CAAGTAAACAATCCAAACGA+AGG 0.668074 3.3:-64941813 MS.gene47599:CDS
GCGCATTAAACAGACTGATG+AGG 0.668737 3.3:-64941983 MS.gene47599:CDS
ATTTCTAGAAGGAAGAACAA+AGG 0.670421 3.3:-64942090 MS.gene47599:CDS
TTCCAAGAGCCTATCACACG+GGG 0.671962 3.3:-64947030 MS.gene47599:CDS
CAAACGGCGACGTATTCCCA+TGG 0.675053 3.3:-64950366 MS.gene47599:CDS
TCTGATGACCATATGGAGAG+TGG 0.676767 3.3:-64942417 MS.gene47599:CDS
GGATTATAAAATCACTTCAG+GGG 0.677804 3.3:-64944518 MS.gene47599:CDS
ATGGAAGAGGATGAAGAAGG+CGG 0.682608 3.3:-64941634 MS.gene47599:CDS
TTAGCAACTCTCAACCACTC+GGG 0.683506 3.3:+64946813 None:intergenic
GAGGATGAGAAAAGTTTACG+TGG 0.686586 3.3:-64943026 MS.gene47599:CDS
GATTCGCCGTCTACTCTGTG+AGG 0.688693 3.3:+64942911 None:intergenic
ACATCTTGCAACCCTTCCAG+GGG 0.692419 3.3:+64941293 None:intergenic
CAAACTCAGAGAAAGTGTAG+TGG 0.697408 3.3:+64950074 None:intergenic
ATTGCTACCAGGTAATCCAG+AGG 0.698796 3.3:+64945824 None:intergenic
TCTTTAAGTCGAGAACTCCG+AGG 0.699394 3.3:+64946419 None:intergenic
ACACCTCAGCCAGTGAAACG+AGG 0.699846 3.3:-64941742 MS.gene47599:CDS
CTACAGAAGACTCATTTCCG+AGG 0.705120 3.3:+64946315 None:intergenic
AGTGGTTTCAGATGATGCAG+TGG 0.706523 3.3:-64942604 MS.gene47599:CDS
ATTTCCAAGAGCCTATCACA+CGG 0.707946 3.3:-64947032 MS.gene47599:CDS
GTTACCATTTGCATCCAACG+AGG 0.712734 3.3:+64946052 None:intergenic
GTTGTTGCTGGCAAATGGTG+TGG 0.725282 3.3:-64943110 MS.gene47599:CDS
CTACAGGCATGGCACCAAGG+AGG 0.732746 3.3:-64943369 MS.gene47599:CDS
GAGCATATTCGAGTTCACAC+CGG 0.734529 3.3:-64941244 MS.gene47599:CDS
CAAACATTGCAACACCCGAG+TGG 0.737907 3.3:-64946827 MS.gene47599:CDS
GAGATGTCAACTGAGTTGCG+AGG 0.742012 3.3:+64946284 None:intergenic
CTTTCCATACAGAATCCCTG+GGG 0.752986 3.3:-64946456 MS.gene47599:intron
CACTTCTGGTGACATCACTG+TGG 0.765118 3.3:+64948317 None:intergenic
TTTCCATACAGAATCCCTGG+GGG 0.778742 3.3:-64946455 MS.gene47599:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr3.3 gene 64941129 64950398 64941129 ID=MS.gene47599
chr3.3 mRNA 64941129 64950398 64941129 ID=MS.gene47599.t1;Parent=MS.gene47599
chr3.3 exon 64949603 64950398 64949603 ID=MS.gene47599.t1.exon1;Parent=MS.gene47599.t1
chr3.3 CDS 64949603 64950398 64949603 ID=cds.MS.gene47599.t1;Parent=MS.gene47599.t1
chr3.3 exon 64948288 64948366 64948288 ID=MS.gene47599.t1.exon2;Parent=MS.gene47599.t1
chr3.3 CDS 64948288 64948366 64948288 ID=cds.MS.gene47599.t1;Parent=MS.gene47599.t1
chr3.3 exon 64947020 64947087 64947020 ID=MS.gene47599.t1.exon3;Parent=MS.gene47599.t1
chr3.3 CDS 64947020 64947087 64947020 ID=cds.MS.gene47599.t1;Parent=MS.gene47599.t1
chr3.3 exon 64946720 64946870 64946720 ID=MS.gene47599.t1.exon4;Parent=MS.gene47599.t1
chr3.3 CDS 64946720 64946870 64946720 ID=cds.MS.gene47599.t1;Parent=MS.gene47599.t1
chr3.3 exon 64945769 64946466 64945769 ID=MS.gene47599.t1.exon5;Parent=MS.gene47599.t1
chr3.3 CDS 64945769 64946466 64945769 ID=cds.MS.gene47599.t1;Parent=MS.gene47599.t1
chr3.3 exon 64944272 64944859 64944272 ID=MS.gene47599.t1.exon6;Parent=MS.gene47599.t1
chr3.3 CDS 64944272 64944859 64944272 ID=cds.MS.gene47599.t1;Parent=MS.gene47599.t1
chr3.3 exon 64941129 64943467 64941129 ID=MS.gene47599.t1.exon7;Parent=MS.gene47599.t1
chr3.3 CDS 64941129 64943467 64941129 ID=cds.MS.gene47599.t1;Parent=MS.gene47599.t1
Gene Sequence

>MS.gene47599

ATGGCAGAATCAAACGGCGACGTATTCCCATGGTTAAAATCCATGCCAGTAGCACCCGAATACCGACCCACTCCAGCTGAATTCGAAGATCCAATCGCATACATTTTCAAGATCGAAAACGAAGCTTCCAAATTCGGAATCTGCAAAATTATCCCTCCTTTTCCACCTTCTTCCAAAAAAACCACCATCTCTAACCTAAACCGTTCATTCCCCAACTCCACATTCACCACCCGGCAACAACAGATCGGGTTCTGTCCCCGTAAACCCCGACCCGTTAAACGACCCGTTTGGCAGAGTGGGGACCACTACACTTTCTCTGAGTTTGAAGCCAAAGCAAAATGGTTTGAAAGAAGTTACATGAACAAGAAGAAGAAAAACAGTAACAGTGCTCTTGAAATAGAGACATTGTTCTGGAAAGCTACGGTTGATAAACCGTTTTCTGTTGAGTATGCTAATGATATGCCGGGTTCTGCTTTCGCCGACACGGTGGAGAATAATAATAAACCGTTTTCTTCCGTTGCGAATAGTGCTTGGAATATGAGAAGGGTTTCAAGGGCCAAAGGGTCTTTGTTGAGGTTTATGAAGGAGGAGATACCGGGAGTTACTTCGCCTATGGTTTATCTTGCTATGCTTTTTAGTTGGTTTGCTTGGCATGTGGAGGATCATGATTTGCATAGCTTGAATTATCTTCATATGGGTGCTTCTAAGACTTGGTATGGTGTTCCTAGAGATGCTGCTGTTGCTTTTGAGGATGTTGTTCGAGTTCATGGTTATGGTGGAGAGATTAACCCTCTTGGTTAGTTTCACTCTTACTTTTGTTAGGGTTCATATGCATTTGTTTTGTTGCAAATTTATAATATAACAATGATTATATGTGGTTTTATGATGTTCTGTTTCTGTTAATTATTTGGGGATTGATATGGATTCTTTCAGAGAAATACAGAGTAGCTTTGTATTGTATAGGAATCTCTGTTTTTGTTGTTTGGCTAAAGTTGTAAAAATTCATATAGAACCAATTCTTAGTGTATGTTTTTCTGCAACTTATTAATCTTTTGACTAGTACATTACCAGATAGTTTGTTTCATTCTCTCTCTGCATGCATGGCTTCTGTTATCTTCCGACAATCCTGAGTTTTAGATTAAGGCAAGGCATGATTGTTAAAACAAAATTCGCTAGTGAAAAAGTTTATGTTTTCAGTTTTTTGATCTCTGTTTTAATCTCAGCCTCTTAGAAGTGAGTAAAATTGTAATCTTAATAAGGAAAGATGACAAAAATTAGGGTTCATGTTGTTTATTTTAGGATTGCAGTTCATTGCTTTAACCCGAGGTGTTAGAAGTTGAACTGTCTGTTCATAAATTGTTGAGAGAACTCTAAGAACACTTCGTGCTCATCAATCTTTGATTTATGAATTCTCAAAATGATTACAATGTGCATTGATCCTATTTATAGATTGCTAAAGCTCTAACTACCTGTAACTAACTCCAAGAGGTTAGTTACAGGGCCATGCTAAACTATTGCTATCCTATAGTAAGTAAGATGCAACTGTAACCATGTCTTGTTAGTTACAGTCAGTCACATAGGAGTGTAGCTACTATAGGTGTAGTCTACACTCTACCATACATACAGTGTACTCTTACAGTAGGCAGTGAATGGATCTAATGATTGCGCACAATTTTAATTTAATGAAATCTTACTAGACGGGGTTTAGAAGTCTACCCTCATTTGAACATGCACCCCTGTCTCTTCCATTTTCCCTCTACAAATACACCGCCTTACTATAATCATCACATTCGTTGGTTTTGTGTTCTACCCAGGCTCTCTTCATTGTTATTATCTTCAATTCTTTAGTGTTGATGTATTGTGTTTTATTTTTCAATCAATGAGGAATATTGGTTCGTCCTATCTCACATTATTGAGAGGACTGGTAGTAATTTCAATATGTGAAAAGGATGACACATTGACACTGCACTTTGTGTTTATATTTGGATGCACATGTTACATGCCTTATCCGGTTCTTGTTTCTTCTGAACAGTTACATTTTCTATTCTTGGTGAGAAGACCACAGTGATGTCACCAGAAGTGTTTATTAGCGCAGGCGTCCCATGCTGCAGGTACTAATTTTTAATGAATGTCATGCTATATTTTGTGATGTTCATATTTGGTAAATCCTCTGGATAAATATCTAGCGTCAATTGTGGGTTGTGGCTTACACTGCCATTTTTGCTGTGGCTTGTGGGTTACTTTGGAATACTGCTTTATTTTGTCCAACAAAAATCAATTTCAACTTTAATGCTATTGAAGTTCAGCAATGGCAAATACAATCTTAGTATCGTACTAGAAATGTATCCCTAGTTCTCATAACATTTAACTAGTTTTTGTTGTAACTAATTAGATGTTAGAATTCATCAATACTACGTCTATTTCTGTTTAGAATAATTTGTTTTAATTGTTCAATTGTTGTTTCGTTACTTCCCTTTGAAACCATTTATTTAGTGGTCCTTCAATTGGTACTAGGAAGCAGCTTGTTAGTTTTGAGGTTTTTGCTAGAAACAAGGAATCTATAATTGTGTGGCAGTGTTTAGTTTATGCAGTTGTCTGGTGCATTCAGTGAGAGTGGAATAACCTAATCTTTAAGGTTTTTTTTTTTTCCTTTGCCATAGGATTGTATTCGTATACAGTGCTCCACTATTTTTGTTTTGGGTTGGGCCTAAATCAACTTTACAAAACCTGCTTGTGAGGTGAAGATTTCCCCCATTTATAAACATATGTTCAAACATATGTTCAGGCCATCTCTCGCCCAATGTAGGACACTTTACACACACCCCTTACGCCCAGAACTGAATATCTGGAGCGTGATCCGATGGCGTAAACCTAACTAAACTTAAAATTTGGGTTGGACCTACCTAAACTTTACAAAACCAACTTGTAAGGTGAGGAGGATAGCCCCCACTTATAAACATATGTTCAGGCCATCTCTCATCGAATGTGGGACTCTTCACAGGCAGTTCCCATTTCTGATATGTTGAGAGATGGGAAAGCCTAGCTGCATGCTTCATGCTTGGTTCCCTTCCCTCTATTCTCCCTTTAGTTTTTCTGGAAAATTCTTTTTCCTTTTGAAAAGAATGTTTTGTCCTCGTCCTAGTAATTGTTACCCTTGTTTATCTCTCTTATTATATGTTTTTTAGTATTTTAATTATGGATTTTGGTAATCATGATAGCAATCATTAGACGCCATTTTTTCAGTGATCCTGTATGGTGGTTTATACTTTATATGCGCATTTATACTTTAAATTTCAATTGCTTTGAATCAGGTTAGTGCAAAATGCTGGGGAATTTGTTGTGACATTTCCAAGAGCCTATCACACGGGGTTCAGTCATGGTAAGATATTTGACAATTTAAGAATGTTACATATAGGCTCAATGTCTCTCTGCATCTCTCTCTCTCTGAGAGGGAGGAGAGTTAACCTTGTGAATACTGTTTATGCTAATTGTTGAATGCTTCCAATGCTTTGGATGTATATTGTGTAGGTTTTAATTGTGCAGAGGCGGCAAACATTGCAACACCCGAGTGGTTGAGAGTTGCTAAAGATGCTGCTATTCGGAGGGCTTCAATAAACTATTCTCCCATGGTTTCACATTTACAGTTACTTTATGACCTTGCCTTAGCTTTGTGTTCTAGGTTTGTCTTTCCCTTTTCTAGCCTTTTGTAATTGCTATAAGAGTGCCGCCAATATCTTGTCATATTATTTACTCAATGGAGTTTCAAGATGTAATTCTCCAATTTTAAAATCTCTGGATGAATCATTCTAGATGATACATAACATGTGCGTGTATTAATATAATGTGATATTCGCACAAATACAATGATTTTAAAGACCATATAACTATTATAATTTATGTTTTGTGTGAATATCCTTTGTCTTTCCATACAGAATCCCTGGGGGAATCAGTGCGGCACCTCGGAGTTCTCGACTTAAAGATAAGAAGAAGGGTGAAGGAGAAGCTGTAATTAAAGAACTATTTGTCCAGGATGTGTTACAAAACAATGATCTGCTTCATGTCCTCGGAAATGAGTCTTCTGTAGTACTTCTTCCTCGCAACTCAGTTGACATCTCTAGTTGCTCAAAATTACGTGTTGGATGCCGGCCACCAAAAGTGAACCCTGGATTTTCCTTTAATGTATGCAATTCTGAGGGACTGAATTCATCAAAAGGTTTTGTTTCTGATGATCTGGTATTCGACAGGAATCGCGGAATTGCCCAAGAAAAAAACTTATGTTCTGTGAAAGATGAATTTACTCTGTTGTGCGAAGGGAAGGGGATTTCCTCGTTGGATGCAAATGGTAACAAATCCCCTTCAAGTTCTAAACAACTTCAAAGAGACAGTGAAAGTGAGACTAGTCAAGGAGATGGATTGTCAGAGCAGAGACTGTTTTCGTGTGTCACGTGTGGACTATTAAACTTTTCATGTGTTGCTATTGTACAGCCTAGAGAGCCAGCAGCTAGGTATCTTATGTCTGCTGATTGCAGCTTCTTTAATGATTGGGTTGCTGCCTCTGGATTACCTGGTAGCAATAAATATACTGCTCCCCATGAAGATGCACATATTCCCGAGCCAAATATGTATGCAGGCAAGTTTTACAAATTACATTTCTAGTATTTTGTATCATATTTTATCAAAATTGGTTTATGGGTTTCTTCAGTTACGATCAATAATGACTACACATTGTAGGTGTTTTTGGGGCCTGTTTCATATGGTCATTAGGAACTATGTCTTCAGTTTATTTATTTGGTCAGTGTCCTATATGTAATACCTGAATTGTGTGGCCAATCTGTCCTGATTTTTTCCTACTGTAGAGCAGAAACACAGTTGTTTCGCATGCTGGTTCTTACATGTCTCTGCATGCGCATGAACTTAGGCTATCCTGTTTGGCTCTCCTCTTTGTTTGTTGCCAAGATATTTTTTATTTGCATCTTTGTTATGTTTTGAAATAGTTATCCTTCTCCTTCTTCCTATTCCTTTTTAAATACTTCCTTTTGGGACAAACCAATTGTACATAACCTAGTTATGCATTTGGACGTTACTCTTTTCTCTTATTATGCATTTGGACTTATATGGGGACTCAAGGTTGGTTTGTTTTCTTTCGGGCTTATGCACCCCCTGAGATGGTTGAGTTAATTGGTTGCAATGTTCAAATCCTAAACTCCGGAAGACTAGAAGATTATCTTGCCTTTTGTGATGGCTGAAGAAGATTTGAGTTGTCCGGCCATAAGTGTCATGAACTGGTCATTTGTTACATAGCACCAAATGTCATAATGATACGCTAGGATTTTAGTTGGGATAATAGTAGAACAGGAACATGCACCAATGCCCTTTGGTGTACATATGAAAACACAACTTAGGTATTTAAGCAACCAAATGCCTTTTACATCATATTTGCCATCTCTCTCAAAAGTTTGACAACTATAAATATTTAGCTCTGATTTTCCTTGGCAACGGTCTAGGTAAAAGTACTGATCTATTTTGTTTTGTAACACAGGGTGGACAAAGAAAAATGCCCAAGAAGAGGCTTTACATTCTGAAGGAGAAAATGGCAATACAGCAGCTACAGCTCTTGCATTATTGGCTTCAGCGTATGGAAGTTCTTCTGACTCTGAGGAAGATGCAGTTGACGGCCATGAATCAAATGCAATAAACTCTACATCAGAAAGTTTGCCTTCTAATTTTTGTGATTCCAATGATAATCCCATGACAATACTTGATAAAGATGATACCCTTTCAGAGAGTGCCAGCTATGAAGCACACAGAAATGAGTGTAATTTGAGTCATCATCCTTGGGATCAATCTTTTGAGGAACAGGATTATAAAATCACTTCAGGGGCTGCATTTGAAAATACAAGGGCAATGCCTTATTCCACCACATATAGTTCCCGTGATACTAATGACGCTGAGAAGTCATTGTCAATCGAGGCAATTGTTCCTGTAAATCATAAAAATGTTTTACTGGTACCACAATGCGATGAAGAGTCGTCTAGAATGCATGTATTCTGTCTAGAGCATGCTGTAGAAGCAGAGCAGCAACTCCGCCCAATAGGTGGAGCCCACATATTGCTCTTATGTCATCCAGGTCTGAGGGTTGATTGATTTACTATTCATTTTGCGAAACAACTCTATTCCTTTGCTTTTTGCCGCTTTTTTTCACTTCTAGTAAAAGATTTCAACTCTTCTGTAAATAGGTGGCATCATATGATTCAATGACGGTAAAATTTCTGTACATTATCTACAGATTAAAAAGTAAACATTTATTTATTATTATTCTCATTGTCCTCCATTTGTCTTTCTTTTTTCTTTTCCTTTATTCTATGCACCTCGTCGCATAGAATGATATAGCTTTTCTCGAACAAGAAAGACTGTAAAGTTTCCTTATCTAATCAATTTCTTTTGAGTAAGGATCAATCTAAAATGGTACTTTTTATTTTAACCAGTGTCCTAAGGACCCTATAAAAATCATGGATCTTATTTTATTTTATATTTTATTTTAAGCAGTTGCTCCTTTTTTTTACCTTTTTTTCAAGTCGCAGACCTTTGCAGAGGCTTTGTATGATTTTTATTTATGTGATGGACAATGTAGGAAACTGACTCTTCACTAGTTCTCATATTTCAGCCTCGGGGAACTTTTTTAGCTATGATAAGTTATACTAACTAGAATGTCTAAAAGGATGCATCTTTCTGATTTGAAAAAAGTATTTTTCAGTTAGTTTCGTGGCTCAATAATAGTTGGTGGTGTATGTTATACCTCTTTGCTACTGATTAACTTTATCTTCATCTCATAGGGTTCAGGTTATTTTACGTGTTTATATTGTGTAGTTGCTTTTACAGTTTATTGGTTTTCCTTTTTGCAAATCATTCATTGCTTATTTTACATGCTCAGATTATCCCAAGATAGAGGCTGAAGCACAGTTGGTGGCAGAAGATTTGGGGATTGATTGTACGTGGAAGAATATTGCCTACAGGCATGGCACCAAGGAGGATGAGAAAAGGATCCAGTCAGCTCTGGATAGTGAGGAAGCGAGTCTCGGGAATGGGGACTGGACTGTAAAGCTAGGAATAAATCTCTTTTATAGTGCAAGTCTTAGCCGCTCTCCCCTTTATAGCAAGCAAATGCCTTACAATTCTGTTATATATTATGCATTCGGTCGTAGCTCTCCAGCAAGCTCACCGATAGAACCAAAGGTTTATCAGAGAAGGGCTGACAAGCAGAAAAAGGTTGTTGCTGGCAAATGGTGTGGTAAAGTTTGGATGTCTAATCAGGTCCATCCCCTTTTAGCAATAAGGGATTCTGAAGATGTTGAGGATGAGAAAAGTTTACGTGGATTGGTATTGCCTGATGTGAAAATTGAGAGATTGGGAAGTACCCCCAAAACTGCAACGGCTATCTCAAAATCAGGCAGGAAAAGGAAAACAACCTCACAGAGTAGACGGCGAATCAGGAAAGGAAATTTCGATGATAAGGATGTGGTTTTGGATGATTCTGCTGAAGATAAACCCAGTCCTCGGCCAAGAAGGTTTGTTAGAAGCAAGCAAGCTAAGGGTGTTGAGAAAGATGGTGCAGCTTTGCAGAGGAACTGTTCTCCATATCATCATAGAAAACATATAAGCAAACAAACCAATTGCACTGAAAGTGATGTAGTTTCTGATGATTCGATTGATGATGATTGCATGCAAAATAGATGGAGTTTTAATGTCAAAAAAGCTAAATTTGCTGGCAATGAAGTGGTTTCAGATGATGCAGTGGACTATGATTCTGATTGTAATCGAATGGAAGAATTTAGAAGCAATCAAGATGAAGATACAGAGAGAGACTCAGTTTCAGAGGATTCTTTGGATGTTGGTTCTCTTCCGTTGCACAGAATGACTTCCAGAAGCAAGCATGCCGACTATATTGGTGAAGATGCAATTTCTGATGACCATATGGAGAGTGGTTGTCAGAAGCAGAAAAGGAGAATTGCTAAAAGCTGGCAAGGCAAATACCTTGCTGAAAAAGATTCAGTGATATCAGACGACCAACTGGAGCCGAACAAGCAGAAGCAGCGACGGAGTAATCCTAAAAGTAGGAAAGCCAGAAACCTTGCCAAAGAGGATACTGTGTCAGACGATCAAACAAATGTCTATCGTCGCAAGTACCAAAGAAGGACAGTTAAAGTCAGGCAAGCCAAATGTGTAGCAGAGGAAGATGTAATGTCTGACGACCAATTGGAGGTTTCCTATCAAAGGCATAAAACAGGTATTTCTAGAAGGAAGAACAAAGGCATTGATAGAGTGAAAAATGAAATGTCTGATGATCAACTGGATGATCACTTTCAGAAGCAGCAAAGAAAAAATCCTAGGAGCAGGCGCATTAAACAGACTGATGAGGAAGATATCGATGACTCAGCTGACAATAATGCTCATCTGCTGCATAGAACCCCTAAAAGGAAGAAAGCTAAATGCAAGGATGAAGATCATATGATTTTAGATAACGAAATGGAAGATGATTCTCTTCAGCAGCGCAAGAGAACTCTTCCAAGTAAACAATCCAAACGAAGGACAGTTAAACAGATGAAACAATCCAAAACTCTCCAAATGAAAAACCAGACACCTCAGCCAGTGAAACGAGGAGCTCAGAAGAATGCTAAGCAAGTAAAGCAGCCGTCTCATTTGCGGAGTAAACATTCTGACAACTCCAGAGAGCCTAGTATAGATATGGAAGAGGATGAAGAAGGCGGACCTAGTACACGCCTTAGAAAGAGAGTCTCAAAAGCTCAGGTGTCTGAAGTAAAATCAAAAGACAGGCAAACCAAAAGGAAAAGGGCAAATGATGTTGCAGCTGCAAAGGTTTCAGCTTGCAATCCCAAATCAGAGGACGAGGAAGCAGAATATCAGTGTGACATTGAGGGATGCACCATGAGCTTCGAGTCAAAAGAAGAGTTGGTGCATCATAAGAGAAACATCTGTCCAGTACAGGGTTGCGGAAAAAAGTTTTTCTCGCACAAATATCTGGTGCAGCACCGGCGAGTTCATGAAGATGACCGTCCTCTGAAGTGCCCCTGGAAGGGTTGCAAGATGTCTTTCAAGTGGGCATGGGCTCGAACCGAGCATATTCGAGTTCACACCGGTGCACGACCTTATGCATGTGCCGAGCCAGGTTGTGGTCAAACATTCAGATTTGTGTCTGATTTCAGTCGTCATAAGCGAAAGACTGGTCATTTAGCGAAGAAGATTCGTCAATAG
Protein sequence

>MS.gene47599.t1

MAESNGDVFPWLKSMPVAPEYRPTPAEFEDPIAYIFKIENEASKFGICKIIPPFPPSSKKTTISNLNRSFPNSTFTTRQQQIGFCPRKPRPVKRPVWQSGDHYTFSEFEAKAKWFERSYMNKKKKNSNSALEIETLFWKATVDKPFSVEYANDMPGSAFADTVENNNKPFSSVANSAWNMRRVSRAKGSLLRFMKEEIPGVTSPMVYLAMLFSWFAWHVEDHDLHSLNYLHMGASKTWYGVPRDAAVAFEDVVRVHGYGGEINPLVTFSILGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCAEAANIATPEWLRVAKDAAIRRASINYSPMVSHLQLLYDLALALCSRIPGGISAAPRSSRLKDKKKGEGEAVIKELFVQDVLQNNDLLHVLGNESSVVLLPRNSVDISSCSKLRVGCRPPKVNPGFSFNVCNSEGLNSSKGFVSDDLVFDRNRGIAQEKNLCSVKDEFTLLCEGKGISSLDANGNKSPSSSKQLQRDSESETSQGDGLSEQRLFSCVTCGLLNFSCVAIVQPREPAARYLMSADCSFFNDWVAASGLPGSNKYTAPHEDAHIPEPNMYAGWTKKNAQEEALHSEGENGNTAATALALLASAYGSSSDSEEDAVDGHESNAINSTSESLPSNFCDSNDNPMTILDKDDTLSESASYEAHRNECNLSHHPWDQSFEEQDYKITSGAAFENTRAMPYSTTYSSRDTNDAEKSLSIEAIVPVNHKNVLLVPQCDEESSRMHVFCLEHAVEAEQQLRPIGGAHILLLCHPDYPKIEAEAQLVAEDLGIDCTWKNIAYRHGTKEDEKRIQSALDSEEASLGNGDWTVKLGINLFYSASLSRSPLYSKQMPYNSVIYYAFGRSSPASSPIEPKVYQRRADKQKKVVAGKWCGKVWMSNQVHPLLAIRDSEDVEDEKSLRGLVLPDVKIERLGSTPKTATAISKSGRKRKTTSQSRRRIRKGNFDDKDVVLDDSAEDKPSPRPRRFVRSKQAKGVEKDGAALQRNCSPYHHRKHISKQTNCTESDVVSDDSIDDDCMQNRWSFNVKKAKFAGNEVVSDDAVDYDSDCNRMEEFRSNQDEDTERDSVSEDSLDVGSLPLHRMTSRSKHADYIGEDAISDDHMESGCQKQKRRIAKSWQGKYLAEKDSVISDDQLEPNKQKQRRSNPKSRKARNLAKEDTVSDDQTNVYRRKYQRRTVKVRQAKCVAEEDVMSDDQLEVSYQRHKTGISRRKNKGIDRVKNEMSDDQLDDHFQKQQRKNPRSRRIKQTDEEDIDDSADNNAHLLHRTPKRKKAKCKDEDHMILDNEMEDDSLQQRKRTLPSKQSKRRTVKQMKQSKTLQMKNQTPQPVKRGAQKNAKQVKQPSHLRSKHSDNSREPSIDMEEDEEGGPSTRLRKRVSKAQVSEVKSKDRQTKRKRANDVAAAKVSACNPKSEDEEAEYQCDIEGCTMSFESKEELVHHKRNICPVQGCGKKFFSHKYLVQHRRVHEDDRPLKCPWKGCKMSFKWAWARTEHIRVHTGARPYACAEPGCGQTFRFVSDFSRHKRKTGHLAKKIRQ