AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47807

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47807.t1 MTR_2g101720 97.481 794 16 1 1 790 1 794 0.0 1609
MS.gene47807.t1 MTR_8g432540 43.196 801 375 15 34 788 43 809 0.0 637
MS.gene47807.t1 MTR_2g088470 43.961 712 356 10 106 788 38 735 0.0 618
MS.gene47807.t1 MTR_4g047800 42.533 750 379 13 66 788 8 732 0.0 613
MS.gene47807.t1 MTR_7g076080 41.214 791 393 14 39 788 18 777 0.0 612
MS.gene47807.t1 MTR_1g101280 42.450 702 350 13 133 785 54 750 0.0 572
MS.gene47807.t1 MTR_6g477820 40.252 713 354 13 133 787 27 725 0.0 558
MS.gene47807.t1 MTR_5g029320 37.132 781 403 16 82 785 9 778 6.11e-167 503
MS.gene47807.t1 MTR_0198s0030 38.482 751 377 13 95 785 26 751 3.08e-166 499
MS.gene47807.t1 MTR_5g005600 38.075 696 380 14 126 785 36 716 1.04e-154 468
MS.gene47807.t1 MTR_7g427710 37.518 685 363 16 122 787 2 640 3.11e-150 454
MS.gene47807.t1 MTR_2g030570 32.425 697 434 13 118 785 7 695 1.02e-117 371
MS.gene47807.t1 MTR_2g030600 31.746 693 437 15 118 785 7 688 5.32e-108 346
MS.gene47807.t1 MTR_2g030660 31.268 678 414 19 125 785 5 647 1.24e-93 306
MS.gene47807.t1 MTR_7g427690 36.461 373 211 7 299 663 57 411 1.22e-82 271
MS.gene47807.t1 MTR_2g083350 30.784 536 321 13 290 785 6 531 1.93e-74 252
MS.gene47807.t1 MTR_2g083330 29.942 521 320 10 301 786 16 526 3.49e-68 235
MS.gene47807.t1 MTR_7g427700 35.517 290 155 5 134 416 15 279 6.17e-50 182
MS.gene47807.t1 MTR_7g427700 37.888 161 82 5 637 787 281 433 4.55e-22 100
MS.gene47807.t1 MTR_0653s0020 35.106 188 103 5 482 667 3 173 2.15e-35 133
MS.gene47807.t1 MTR_2g101740 74.157 89 8 1 702 790 1 74 5.17e-34 125
MS.gene47807.t1 MTR_7g027265 44.030 134 73 1 123 256 5 136 1.87e-29 114
MS.gene47807.t1 MTR_2g030690 31.741 293 174 10 503 785 1 277 2.13e-29 119
MS.gene47807.t1 MTR_5g046040 38.922 167 92 4 133 296 31 190 1.15e-26 113
MS.gene47807.t1 MTR_3g109800 21.488 726 408 25 138 779 20 667 7.95e-24 107
MS.gene47807.t1 MTR_3g109800 21.488 726 408 25 138 779 20 667 8.77e-24 107
MS.gene47807.t1 MTR_3g109800 21.380 739 419 25 125 779 7 667 9.09e-24 107
MS.gene47807.t1 MTR_2g094520 24.615 520 309 18 138 636 23 480 1.02e-23 107
MS.gene47807.t1 MTR_4g058970 23.119 545 316 18 122 636 12 483 6.12e-22 102
MS.gene47807.t1 MTR_8g013980 22.159 528 315 17 138 636 15 475 4.58e-21 99.4
MS.gene47807.t1 MTR_2g101190 21.852 540 328 19 124 636 5 477 5.52e-21 99.0
MS.gene47807.t1 MTR_7g027605 43.956 91 50 1 387 477 2 91 4.83e-20 85.9
MS.gene47807.t1 MTR_0653s0010 41.935 124 55 4 673 787 1 116 1.97e-18 82.0
MS.gene47807.t1 MTR_2g101750 80.435 46 9 0 745 790 9 54 1.44e-17 77.4
MS.gene47807.t1 MTR_6g027290 29.032 155 102 3 123 273 12 162 3.21e-16 77.8
MS.gene47807.t1 MTR_2g451350 26.667 135 99 0 311 445 1 135 2.32e-14 71.2
MS.gene47807.t1 MTR_7g103340 41.176 102 55 1 121 222 51 147 1.09e-13 71.6
MS.gene47807.t1 MTR_1g105420 31.765 170 92 6 194 343 5 170 2.14e-13 70.5
MS.gene47807.t1 MTR_2g030700 28.986 138 87 3 123 260 6 132 1.01e-12 67.0
MS.gene47807.t1 MTR_2g101730 54.545 66 17 2 725 790 19 71 2.27e-12 63.2
MS.gene47807.t1 MTR_2g030680 28.986 138 87 3 123 260 6 132 7.24e-12 64.7
MS.gene47807.t1 MTR_1g054285 36.842 114 68 1 107 220 127 236 9.52e-12 67.0
MS.gene47807.t1 MTR_4g100550 34.459 148 82 4 73 220 70 202 4.75e-11 64.7
MS.gene47807.t1 MTR_6g011610 30.457 197 105 5 26 222 16 180 6.52e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47807.t1 AT1G79840 62.532 774 257 10 21 789 1 746 0.0 961
MS.gene47807.t1 AT1G79840 62.532 774 257 10 21 789 30 775 0.0 957
MS.gene47807.t1 AT1G79840 64.723 703 228 7 92 789 1 688 0.0 924
MS.gene47807.t1 AT1G79840 64.723 703 228 7 92 789 1 688 0.0 924
MS.gene47807.t1 AT1G79840 62.558 649 210 10 21 664 1 621 0.0 799
MS.gene47807.t1 AT4G04890 42.897 718 367 10 106 790 33 740 0.0 617
MS.gene47807.t1 AT4G04890 42.897 718 367 10 106 790 33 740 0.0 617
MS.gene47807.t1 AT1G79840 60.566 530 176 10 21 545 1 502 0.0 613
MS.gene47807.t1 AT4G00730 44.160 702 352 11 111 788 116 801 0.0 607
MS.gene47807.t1 AT4G21750 42.777 713 349 9 128 788 55 760 0.0 606
MS.gene47807.t1 AT4G21750 42.777 713 349 9 128 788 55 760 0.0 606
MS.gene47807.t1 AT4G21750 42.777 713 349 9 128 788 55 760 0.0 606
MS.gene47807.t1 AT4G21750 42.777 713 349 9 128 788 55 760 0.0 606
MS.gene47807.t1 AT1G05230 42.716 707 357 9 106 788 35 717 0.0 600
MS.gene47807.t1 AT1G05230 42.595 709 357 9 106 788 35 719 0.0 599
MS.gene47807.t1 AT1G05230 42.595 709 357 9 106 788 35 719 0.0 599
MS.gene47807.t1 AT1G05230 42.595 709 357 9 106 788 35 719 0.0 599
MS.gene47807.t1 AT1G05230 42.595 709 357 9 106 788 35 719 0.0 599
MS.gene47807.t1 AT1G05230 42.595 709 357 9 106 788 35 719 0.0 599
MS.gene47807.t1 AT1G05230 42.595 709 357 9 106 788 35 719 0.0 599
MS.gene47807.t1 AT1G05230 42.595 709 357 9 106 788 35 719 0.0 599
MS.gene47807.t1 AT1G05230 42.595 709 357 9 106 788 35 719 0.0 599
MS.gene47807.t1 AT1G05230 42.595 709 357 9 106 788 35 719 0.0 599
MS.gene47807.t1 AT1G05230 42.595 709 357 9 106 788 35 719 0.0 599
MS.gene47807.t1 AT3G61150 42.276 738 343 12 114 788 89 806 0.0 590
MS.gene47807.t1 AT1G05230 42.808 577 299 6 106 663 35 599 6.15e-166 493
MS.gene47807.t1 AT5G52170 40.810 691 360 14 106 785 26 678 3.68e-165 494
MS.gene47807.t1 AT5G52170 40.810 691 360 14 106 785 26 678 3.68e-165 494
MS.gene47807.t1 AT5G52170 40.521 691 367 12 106 785 26 683 1.06e-163 490
MS.gene47807.t1 AT1G17920 38.655 714 373 15 107 787 2 683 2.26e-163 489
MS.gene47807.t1 AT1G17920 38.655 714 373 15 107 787 2 683 2.26e-163 489
MS.gene47807.t1 AT1G73360 39.571 700 360 18 134 786 31 714 7.04e-163 489
MS.gene47807.t1 AT2G32370 39.856 695 366 14 121 788 54 723 2.20e-160 483
MS.gene47807.t1 AT5G46880 35.772 738 388 18 110 785 93 806 1.88e-145 448
MS.gene47807.t1 AT5G46880 35.772 738 388 18 110 785 93 806 1.88e-145 448
MS.gene47807.t1 AT5G46880 35.772 738 388 18 110 785 93 806 1.88e-145 448
MS.gene47807.t1 AT4G17710 37.500 664 354 16 135 785 88 703 1.17e-132 411
MS.gene47807.t1 AT5G17320 32.514 732 416 17 116 788 6 718 8.32e-125 390
MS.gene47807.t1 AT3G03260 32.964 722 407 18 120 789 2 698 2.19e-122 384
MS.gene47807.t1 AT4G00730 42.763 456 226 7 111 544 116 558 1.94e-120 374
MS.gene47807.t1 AT4G25530 32.855 697 424 15 107 788 18 685 1.86e-118 373
MS.gene47807.t1 AT1G34650 32.432 703 402 18 142 788 23 708 3.08e-105 339
MS.gene47807.t1 AT3G03260 31.942 551 326 13 120 635 2 538 1.64e-88 290
MS.gene47807.t1 AT5G07260 20.632 538 371 15 201 733 10 496 1.03e-27 119
MS.gene47807.t1 AT5G07260 20.849 542 370 17 201 733 10 501 2.40e-27 117
MS.gene47807.t1 AT4G32880 20.793 731 436 26 125 779 2 665 1.65e-24 110
MS.gene47807.t1 AT5G60690 23.062 529 298 21 138 636 25 474 2.41e-21 100
MS.gene47807.t1 AT1G30490 22.409 656 383 26 126 720 9 599 5.92e-21 99.0
MS.gene47807.t1 AT2G34710 21.265 743 421 29 128 785 15 678 1.88e-18 90.9
MS.gene47807.t1 AT4G26920 26.667 195 125 6 289 478 47 228 1.85e-14 77.0
MS.gene47807.t1 AT3G60390 39.623 106 58 2 118 222 146 246 1.54e-11 67.0
MS.gene47807.t1 AT4G16780 36.752 117 62 2 110 220 101 211 5.01e-11 64.7

Find 169 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCAAGGCAAGTCAAATTT+TGG 0.154977 2.1:-3435136 MS.gene47807:CDS
CACAGACTCCATTGTTAATT+TGG 0.156081 2.1:+3430383 None:intergenic
GTCAACAGTGGCCTAGCTTT+TGG 0.171217 2.1:-3431463 MS.gene47807:CDS
TGATTTGGGTACGACGATTT+TGG 0.178481 2.1:+3435111 None:intergenic
TTGGCTTTAAATAGGTAGTA+TGG 0.217597 2.1:-3431540 MS.gene47807:intron
TTCAAATTCATCCATTGATT+TGG 0.230510 2.1:+3436424 None:intergenic
GAGAAGCATTTGTAAGGATT+TGG 0.247426 2.1:+3430412 None:intergenic
ATTTAAATAATACCTTGATT+TGG 0.259779 2.1:+3435096 None:intergenic
GGGGCAACAAGCCTTATTTA+TGG 0.261801 2.1:+3434897 None:intergenic
AGAGAATATTAAAAGCTCTT+TGG 0.271894 2.1:-3433998 MS.gene47807:CDS
CGGCATGGCGGTGCGGCGGC+GGG 0.287501 2.1:-3436563 MS.gene47807:CDS
TTCAATTGTTTCTGATGGTT+TGG 0.287727 2.1:-3430511 MS.gene47807:CDS
GTTTCCATGTTTAATATCTA+AGG 0.290461 2.1:-3433536 MS.gene47807:CDS
TTTGTGCTGTTTCTTCTATA+TGG 0.290578 2.1:-3431052 MS.gene47807:CDS
TCGGCATGGCGGTGCGGCGG+CGG 0.292792 2.1:-3436564 MS.gene47807:CDS
GTTGTCTTCTACTTTGTCTA+TGG 0.298498 2.1:+3431810 None:intergenic
GGCATGGCGGTGCGGCGGCG+GGG 0.303946 2.1:-3436562 MS.gene47807:CDS
GGGGAGGAAGGGAGTACAAT+AGG 0.308975 2.1:-3436497 MS.gene47807:CDS
GAGAGGCTGAGAGCAGCTTT+AGG 0.319197 2.1:-3434072 MS.gene47807:CDS
GAAGCTTCAATGGATCTCTT+TGG 0.328107 2.1:+3433781 None:intergenic
TTTAAATAATACCTTGATTT+GGG 0.331757 2.1:+3435097 None:intergenic
CATAACCTCAGCTTTGAGTT+TGG 0.338433 2.1:+3434801 None:intergenic
GTGGTGGGGACCCCACAGTT+GGG 0.352837 2.1:+3434877 None:intergenic
CTCACCAGTTGAATCCTTCA+TGG 0.359314 2.1:+3431369 None:intergenic
TCCATTGATTTGGATTTAGT+TGG 0.361488 2.1:+3436434 None:intergenic
ATTGCCTCTGTCTTGTCCTT+TGG 0.362072 2.1:+3430821 None:intergenic
GCATGGCGGTGCGGCGGCGG+GGG 0.367383 2.1:-3436561 MS.gene47807:CDS
GGTAGTATGGGTGGAGCATT+TGG 0.373488 2.1:-3431527 MS.gene47807:CDS
GAAATTAGCAGCGAGTATTC+AGG 0.374487 2.1:-3436458 MS.gene47807:CDS
TGGAGAGGGAAAGAAGTCTT+TGG 0.377024 2.1:+3437026 None:intergenic
GAGGTGGAAGAAGGGGAGGA+AGG 0.380425 2.1:-3436509 MS.gene47807:CDS
TGTGGTGGGGACCCCACAGT+TGG 0.383545 2.1:+3434876 None:intergenic
CCTACGAGAGACCATAAATA+AGG 0.385213 2.1:-3434908 MS.gene47807:CDS
AAGAAATCAAACAAAACATT+AGG 0.391068 2.1:+3431017 None:intergenic
ATAAGAACAAGAAGAAGAAA+AGG 0.391486 2.1:-3436343 MS.gene47807:CDS
AACCAAAATTTGACTTGCCT+TGG 0.392620 2.1:+3435134 None:intergenic
CATTGCACCATCTCTGTTTG+TGG 0.393009 2.1:+3434858 None:intergenic
TGTATCTCTTGAAGCTTCAA+TGG 0.394810 2.1:+3433771 None:intergenic
ACTAAGGTTACTAGTAAAAC+TGG 0.395797 2.1:-3431140 MS.gene47807:CDS
CAAGAATGGTGCAGTGCAAC+TGG 0.400659 2.1:-3433473 MS.gene47807:intron
AGTAATATGGAGGTGGAAGA+AGG 0.401643 2.1:-3436518 MS.gene47807:CDS
AACAAAACATTAGGAGATAT+AGG 0.411699 2.1:+3431026 None:intergenic
CAACAACTTAGCAAGCAATT+AGG 0.414776 2.1:-3435164 MS.gene47807:CDS
AGAGGCTGAGAGCAGCTTTA+GGG 0.415023 2.1:-3434071 MS.gene47807:CDS
TCTTTGGCTTTAGAAGTAGA+AGG 0.415922 2.1:+3437042 None:intergenic
ACAAAATACACTTCTCTAGT+TGG 0.422278 2.1:+3431883 None:intergenic
TTATAAGCTCCTCCATTGCT+TGG 0.425119 2.1:+3433920 None:intergenic
TGAAAATCCTGAGGGCAGTA+TGG 0.428055 2.1:+3430530 None:intergenic
AATCAGAAATAGAGAAACTA+AGG 0.429794 2.1:-3434945 MS.gene47807:CDS
AGGTGGAAGAAGGGGAGGAA+GGG 0.430407 2.1:-3436508 MS.gene47807:CDS
TGGATCTCTTTGGTCTTCCA+TGG 0.443218 2.1:+3433791 None:intergenic
TTAGGTGTTGCCACATTGGC+TGG 0.448272 2.1:-3431245 MS.gene47807:intron
ATTGAAGCTTCAAGAGATAC+AGG 0.451362 2.1:-3433769 MS.gene47807:CDS
CCCATCTGGTTGCATTATTG+AGG 0.452497 2.1:-3431755 MS.gene47807:CDS
GTAATATGGAGGTGGAAGAA+GGG 0.456514 2.1:-3436517 MS.gene47807:CDS
CTTGAGGAGAAGCATTTGTA+AGG 0.456876 2.1:+3430406 None:intergenic
TACGCACCTGTGGATATTAC+CGG 0.457137 2.1:-3430594 MS.gene47807:CDS
TCTTGATGAGTCAAGAATAA+TGG 0.457181 2.1:-3433953 MS.gene47807:CDS
TGGTGGGGACCCCACAGTTG+GGG 0.457773 2.1:+3434878 None:intergenic
ACAAGTCTAAATTGTGAAGA+TGG 0.459079 2.1:-3430315 MS.gene47807:CDS
TCCAACTAAATCCAAATCAA+TGG 0.462181 2.1:-3436435 MS.gene47807:CDS
TTTCTGATGGTTTGGAGTCA+AGG 0.463190 2.1:-3430503 MS.gene47807:CDS
GTGCATCAAGCTTCCATACA+TGG 0.464344 2.1:-3431163 MS.gene47807:CDS
GCTTTAGGGAAATATGCATC+AGG 0.464608 2.1:-3434057 MS.gene47807:CDS
GACGTTCGCATTGAAGTTGA+AGG 0.466117 2.1:+3431419 None:intergenic
AAATGCAGAAAACGCCCATC+TGG 0.466193 2.1:-3431769 MS.gene47807:CDS
AATGATCCTAGTGAACATCT+TGG 0.466350 2.1:-3431083 MS.gene47807:CDS
TGCTATGTTTGCAGAATCAA+TGG 0.466472 2.1:-3433567 MS.gene47807:intron
TCCTTTGGCTAAATTTGCAA+TGG 0.466744 2.1:+3430836 None:intergenic
TAGTAACCTTAGTCCATGTA+TGG 0.466982 2.1:+3431150 None:intergenic
CACAAATTCTTACGAATCAA+TGG 0.474074 2.1:-3430622 MS.gene47807:CDS
GCTAAGAGAGAGAGCTGGAG+AGG 0.488674 2.1:+3437011 None:intergenic
TAATATGGAGGTGGAAGAAG+GGG 0.489966 2.1:-3436516 MS.gene47807:CDS
CTTATTTATGGTCTCTCGTA+GGG 0.492068 2.1:+3434909 None:intergenic
ACTTCTCTAGTTGGAACCAT+TGG 0.492214 2.1:+3431892 None:intergenic
GTAAAACTGGAGAAGACATA+AGG 0.495014 2.1:-3431127 MS.gene47807:CDS
ATTATTGAGGATAAGTCAAA+TGG 0.496385 2.1:-3431742 MS.gene47807:CDS
TGGCTTTAAATAGGTAGTAT+GGG 0.500533 2.1:-3431539 MS.gene47807:intron
AGGCTTGTTGCCCCAACTGT+GGG 0.503595 2.1:-3434888 MS.gene47807:CDS
CTTATAAAGATGGCAACAAT+GGG 0.505105 2.1:-3433904 MS.gene47807:CDS
CAGTGGGATATAATGTCTAA+TGG 0.509556 2.1:-3430873 MS.gene47807:CDS
GGTATTCAATCCGTGATGAC+CGG 0.513881 2.1:-3430573 MS.gene47807:CDS
CCTTATTTATGGTCTCTCGT+AGG 0.514357 2.1:+3434908 None:intergenic
GCACCATCTCTGTTTGTGGT+GGG 0.514855 2.1:+3434862 None:intergenic
AAATCAATGGATGAATTTGA+AGG 0.515118 2.1:-3436422 MS.gene47807:CDS
TCCATTGTTAATTTGGCTTG+AGG 0.515245 2.1:+3430390 None:intergenic
AATCAAAAGAAAACAATATG+TGG 0.518388 2.1:-3430662 MS.gene47807:CDS
TGCACCATCTCTGTTTGTGG+TGG 0.525119 2.1:+3434861 None:intergenic
TCCTCAATAATGCAACCAGA+TGG 0.528035 2.1:+3431754 None:intergenic
TGGTTTGGAGTCAAGGCAAA+TGG 0.529541 2.1:-3430496 MS.gene47807:CDS
GTTCCCATGAAGGATTCAAC+TGG 0.531129 2.1:-3431373 MS.gene47807:intron
AAATCGTCGTACCCAAATCA+AGG 0.531425 2.1:-3435108 MS.gene47807:intron
CACCATCTCTGTTTGTGGTG+GGG 0.533160 2.1:+3434863 None:intergenic
AAGCTTCCATACATGGACTA+AGG 0.539054 2.1:-3431156 MS.gene47807:CDS
GCTTATAAAGATGGCAACAA+TGG 0.540324 2.1:-3433905 MS.gene47807:CDS
GGAGAAGGTTCTAACAAGAA+TGG 0.540967 2.1:-3433487 MS.gene47807:CDS
GTTGCAAATGTTAACACCAA+TGG 0.544408 2.1:-3431908 MS.gene47807:CDS
ATAGTTAAGTATTTCACGAC+CGG 0.544434 2.1:+3433852 None:intergenic
GGCAACAAACGTTCCCATGA+AGG 0.546780 2.1:-3431383 MS.gene47807:CDS
AATGCCTTGCCCCAAAAGCT+AGG 0.549012 2.1:+3431452 None:intergenic
TCCATTGCAAATTTAGCCAA+AGG 0.550629 2.1:-3430837 MS.gene47807:CDS
CGAATCACATCCGGTCATCA+CGG 0.551333 2.1:+3430563 None:intergenic
TAGATTGCTCGAATCACATC+CGG 0.551516 2.1:+3430554 None:intergenic
AATGGAGGAGCTTATAAAGA+TGG 0.553738 2.1:-3433914 MS.gene47807:CDS
ATTCTCTTGGTCATGACTAG+TGG 0.554085 2.1:+3434014 None:intergenic
AGCAATTAGGTCTTGCTCCA+AGG 0.554546 2.1:-3435151 MS.gene47807:CDS
TAACTATGATGAATATATGA+AGG 0.554639 2.1:-3433836 MS.gene47807:CDS
TCACCAGTTGAATCCTTCAT+GGG 0.555142 2.1:+3431370 None:intergenic
GGGATATAATGTCTAATGGT+GGG 0.556948 2.1:-3430869 MS.gene47807:CDS
GGCAAATGGTAATTACTTCG+AGG 0.560541 2.1:-3430482 MS.gene47807:CDS
AATCTAGCCATACTGCCCTC+AGG 0.562964 2.1:-3430537 MS.gene47807:CDS
GAGGAAGGGAGTACAATAGG+AGG 0.565183 2.1:-3436494 MS.gene47807:CDS
TGAATACCGGTAATATCCAC+AGG 0.566945 2.1:+3430588 None:intergenic
TATGGAGGTGGAAGAAGGGG+AGG 0.567505 2.1:-3436513 MS.gene47807:CDS
AGAAAAGGAAGAAATATCAC+AGG 0.572043 2.1:-3436328 MS.gene47807:CDS
AATGGTAATTACTTCGAGGC+GGG 0.572459 2.1:-3430478 MS.gene47807:CDS
GGTCATCACGGATTGAATAC+CGG 0.575578 2.1:+3430575 None:intergenic
CCTCAATAATGCAACCAGAT+GGG 0.578551 2.1:+3431755 None:intergenic
GGATGTAGTAAACCAAGCAA+TGG 0.580722 2.1:-3433932 MS.gene47807:CDS
CTAAGAGAGAGAGCTGGAGA+GGG 0.582499 2.1:+3437012 None:intergenic
TCCTCAAGCCAAATTAACAA+TGG 0.583942 2.1:-3430391 MS.gene47807:CDS
TTCTGAACAGATCAGAGTCA+TGG 0.585454 2.1:-3436300 MS.gene47807:CDS
ATTGTTAGGTGTTGCCACAT+TGG 0.587255 2.1:-3431249 MS.gene47807:intron
ATCAGAAATAGAGAAACTAA+GGG 0.588729 2.1:-3434944 MS.gene47807:CDS
TGGGATATAATGTCTAATGG+TGG 0.590022 2.1:-3430870 MS.gene47807:CDS
ACAAGGCTAAGAGAGAGAGC+TGG 0.592876 2.1:+3437006 None:intergenic
AAGGCTTGTTGCCCCAACTG+TGG 0.593522 2.1:-3434889 MS.gene47807:CDS
GCCGTTGAAAATTCAGACCA+TGG 0.602698 2.1:-3433808 MS.gene47807:CDS
TACAATAGGAGGTGAGCGTG+TGG 0.603598 2.1:-3436483 MS.gene47807:CDS
TTACAGCATCAAGAAAACAT+TGG 0.605442 2.1:+3433716 None:intergenic
TAATACATGTGTAGGTAGAG+AGG 0.607160 2.1:-3434089 MS.gene47807:intron
GACACTATATGCAAAGGAGA+AGG 0.607999 2.1:-3433502 MS.gene47807:CDS
TGTAGTAAACCAAGCAATGG+AGG 0.608774 2.1:-3433929 MS.gene47807:CDS
GATGAACTTGAAGATGATGA+AGG 0.609560 2.1:-3436398 MS.gene47807:CDS
AGAAAACATTGGACGATCCG+AGG 0.612026 2.1:+3433727 None:intergenic
AGCTAGGCCACTGTTGACAA+TGG 0.614429 2.1:+3431468 None:intergenic
CAAATTAACAATGGAGTCTG+TGG 0.617939 2.1:-3430382 MS.gene47807:CDS
GATGAAGGTGAAGATGATGA+AGG 0.621690 2.1:-3436383 MS.gene47807:CDS
AGAAACAATTGAAAATCCTG+AGG 0.621946 2.1:+3430521 None:intergenic
CACAAACAGAGATGGTGCAA+TGG 0.622132 2.1:-3434857 MS.gene47807:CDS
GGCTTGTTGCCCCAACTGTG+GGG 0.622702 2.1:-3434887 MS.gene47807:CDS
GAAACAATTGAAAATCCTGA+GGG 0.625241 2.1:+3430522 None:intergenic
ACGTTCGCATTGAAGTTGAA+GGG 0.628268 2.1:+3431420 None:intergenic
GTCCCCACCACAAACAGAGA+TGG 0.629482 2.1:-3434865 MS.gene47807:CDS
AATAGGAGGTGAGCGTGTGG+AGG 0.632405 2.1:-3436480 MS.gene47807:CDS
ACAGTTGACACTATATGCAA+AGG 0.638611 2.1:-3433508 MS.gene47807:CDS
TGGTTACGTAGCTTAGAGAC+CGG 0.638972 2.1:-3433871 MS.gene47807:CDS
ATCAATCCAAGATGTTCACT+AGG 0.639331 2.1:+3431077 None:intergenic
ATGTTTGCAGAATCAATGGA+AGG 0.640926 2.1:-3433563 MS.gene47807:intron
AAATGCCAAACTCAAAGCTG+AGG 0.643784 2.1:-3434806 MS.gene47807:intron
TTGGCTTTAGAAGTAGAAGG+AGG 0.644576 2.1:+3437045 None:intergenic
CTTTAAATAGGTAGTATGGG+TGG 0.647600 2.1:-3431536 MS.gene47807:intron
GCTGCCTTAGATATTAAACA+TGG 0.649260 2.1:+3433532 None:intergenic
CACATCCTGATGAAAAGCAG+AGG 0.653751 2.1:-3435187 MS.gene47807:CDS
GATGATGAAGGTGATGGTGA+TGG 0.658053 2.1:-3436371 MS.gene47807:CDS
TCTAAGCTACGTAACCACAT+TGG 0.660378 2.1:+3433877 None:intergenic
AAATGGTAATTACTTCGAGG+CGG 0.664685 2.1:-3430479 MS.gene47807:CDS
GGATGAAACTCGTCGAACTG+AGG 0.665962 2.1:-3430991 MS.gene47807:intron
GGTGAAGATGATGAAGGTGA+TGG 0.672812 2.1:-3436377 MS.gene47807:CDS
CTTTAGGGAAATATGCATCA+GGG 0.674316 2.1:-3434056 MS.gene47807:CDS
AATGGTGGTATACGCACCTG+TGG 0.675541 2.1:-3430604 MS.gene47807:CDS
AGTTGGCACAAAGAATGACA+TGG 0.675595 2.1:-3431205 MS.gene47807:CDS
TATCGCACCATTGTCAACAG+TGG 0.688962 2.1:-3431475 MS.gene47807:CDS
AAATTCTTACGAATCAATGG+TGG 0.698012 2.1:-3430619 MS.gene47807:CDS
AGATACTGCAAGCAGTTGAG+TGG 0.698583 2.1:-3431859 MS.gene47807:CDS
CAACAATGGGTGAACCAATG+TGG 0.720119 2.1:-3433891 MS.gene47807:CDS
TCATGACTAGTGGAACATGA+AGG 0.724034 2.1:+3434024 None:intergenic
TTAGCCAAAGGACAAGACAG+AGG 0.726395 2.1:-3430825 MS.gene47807:CDS
TCTGCACACATTGACAACGT+TGG 0.738320 2.1:+3437084 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAATTACATGAA+TGG - chr2.1:3432205-3432224 MS.gene47807:intron 10.0%
!! AATATAACTATATTAATCAA+AGG + chr2.1:3431579-3431598 None:intergenic 10.0%
!! TATCATATTACTAATTTAAA+AGG - chr2.1:3431405-3431424 MS.gene47807:CDS 10.0%
!!! TAAATTAATGAATTTCTTTT+AGG - chr2.1:3434057-3434076 MS.gene47807:CDS 10.0%
!!! TTTTGATATTATTTTTATGA+AGG - chr2.1:3435870-3435889 MS.gene47807:intron 10.0%
!! AAATGGAATATATTAATCAA+TGG + chr2.1:3433186-3433205 None:intergenic 15.0%
!! AAGAAATTCATTAATTTAGT+AGG + chr2.1:3434055-3434074 None:intergenic 15.0%
!! AATTAAAAATGTAATCAACT+AGG - chr2.1:3431946-3431965 MS.gene47807:intron 15.0%
!! ATTAAAAATGTAATCAACTA+GGG - chr2.1:3431947-3431966 MS.gene47807:intron 15.0%
!! ATTTAAATAATACCTTGATT+TGG + chr2.1:3432356-3432375 None:intergenic 15.0%
!! GAAAATAAGTTAACTTAATT+TGG - chr2.1:3431866-3431885 MS.gene47807:CDS 15.0%
!! GCAATTTAAATTAAAATTCT+AGG - chr2.1:3435256-3435275 MS.gene47807:intron 15.0%
!! TAAAGAAAACAAAATCATAT+AGG + chr2.1:3435803-3435822 None:intergenic 15.0%
!! TAAGAATTATCATAAGAAAA+AGG - chr2.1:3436108-3436127 MS.gene47807:intron 15.0%
!! TATTATAAAATGTAATCACA+TGG + chr2.1:3431732-3431751 None:intergenic 15.0%
!! TTAAAAATTAGTTCATTAGA+TGG + chr2.1:3430808-3430827 None:intergenic 15.0%
!! TTCATTAACTAATTAATAGT+TGG + chr2.1:3434305-3434324 None:intergenic 15.0%
!! TTTAAATAATACCTTGATTT+GGG + chr2.1:3432355-3432374 None:intergenic 15.0%
!!! AATTTTAAAAGAAAACTCAT+AGG + chr2.1:3430774-3430793 None:intergenic 15.0%
!!! ATTTTGTATATGAATTTAGA+GGG - chr2.1:3436524-3436543 MS.gene47807:CDS 15.0%
!!! CAAAATATCTTTTAAAAATG+AGG - chr2.1:3432840-3432859 MS.gene47807:intron 15.0%
!!! GAAAAATAATGAATTTTCAT+TGG - chr2.1:3432870-3432889 MS.gene47807:intron 15.0%
!!! TAATGAACTAATTTTTAAGT+TGG - chr2.1:3430810-3430829 MS.gene47807:CDS 15.0%
!!! TATTTTGTATATGAATTTAG+AGG - chr2.1:3436523-3436542 MS.gene47807:CDS 15.0%
!!! TTTAACCTTAATTTTGTATT+TGG - chr2.1:3435498-3435517 MS.gene47807:intron 15.0%
!! AAAAACAAAAATTTGACTAG+AGG + chr2.1:3430585-3430604 None:intergenic 20.0%
!! AAGAAATCAAACAAAACATT+AGG + chr2.1:3436435-3436454 None:intergenic 20.0%
!! AATCAAAAGAAAACAATATG+TGG - chr2.1:3436787-3436806 MS.gene47807:intron 20.0%
!! ACAACTATACATATAAAATG+AGG - chr2.1:3435319-3435338 MS.gene47807:intron 20.0%
!! ATCTTTGATATTGAATTAGA+TGG - chr2.1:3434028-3434047 MS.gene47807:CDS 20.0%
!! ATGCAATGATATTATTCATA+TGG + chr2.1:3433802-3433821 None:intergenic 20.0%
!! ATTCATATACAAAATATCTC+AGG + chr2.1:3436519-3436538 None:intergenic 20.0%
!! CATACATTATGTAACAAAAA+TGG + chr2.1:3435766-3435785 None:intergenic 20.0%
!! TAACTATGATGAATATATGA+AGG - chr2.1:3433613-3433632 MS.gene47807:intron 20.0%
!! TATACTACAATCTTATCAAT+AGG + chr2.1:3432075-3432094 None:intergenic 20.0%
!! TCTTTGATATTGAATTAGAT+GGG - chr2.1:3434029-3434048 MS.gene47807:CDS 20.0%
!! TGAAGAAAAAGAAATTTCAT+TGG + chr2.1:3431690-3431709 None:intergenic 20.0%
!! TTAAACTTCTACAAAACAAA+AGG + chr2.1:3433846-3433865 None:intergenic 20.0%
!! TTGAATCACTATATTAAACT+CGG + chr2.1:3436486-3436505 None:intergenic 20.0%
!! TTGTAGTATATTTATTGAAG+AGG - chr2.1:3432085-3432104 MS.gene47807:intron 20.0%
!! TTTAAACTTTAGTAACACTT+TGG - chr2.1:3434782-3434801 MS.gene47807:intron 20.0%
!! TTTCATAAAACCTTATATGT+AGG - chr2.1:3434328-3434347 MS.gene47807:intron 20.0%
!!! AAAAAAGATTAAGTTGATTG+TGG - chr2.1:3434618-3434637 MS.gene47807:intron 20.0%
!!! AAACTTCTAAGAAAAATAAG+AGG - chr2.1:3436735-3436754 MS.gene47807:intron 20.0%
!!! AGAATAGAATTTTCAAACAT+AGG + chr2.1:3434572-3434591 None:intergenic 20.0%
!!! AGGATTAAATAAAAGTACTT+TGG - chr2.1:3435276-3435295 MS.gene47807:intron 20.0%
!!! ATATGCTTTTGATTATAGTA+TGG - chr2.1:3434648-3434667 MS.gene47807:intron 20.0%
!!! CAGTTTTATAAAGTTGATTT+AGG - chr2.1:3435125-3435144 MS.gene47807:CDS 20.0%
!!! CATTTTTGTTACATAATGTA+TGG - chr2.1:3435764-3435783 MS.gene47807:intron 20.0%
!!! CTTAATTTGGATTGAAAATT+TGG - chr2.1:3431879-3431898 MS.gene47807:CDS 20.0%
!!! CTTTTAAAAATGAGGTAATA+CGG - chr2.1:3432848-3432867 MS.gene47807:intron 20.0%
!!! GAGTAATTTTTAAGAATTGT+AGG + chr2.1:3434096-3434115 None:intergenic 20.0%
!!! GATTTTTATACTGGAATTTT+TGG - chr2.1:3433473-3433492 MS.gene47807:intron 20.0%
!!! TAAAGTACTAGCTAAAAAAA+TGG + chr2.1:3433203-3433222 None:intergenic 20.0%
!!! TTCATAATGTCTTTTTTGAT+AGG + chr2.1:3434265-3434284 None:intergenic 20.0%
!!! TTTTGTATATGAATTTAGAG+GGG - chr2.1:3436525-3436544 MS.gene47807:CDS 20.0%
! AAAACAAACAACTAATCAAG+TGG + chr2.1:3432044-3432063 None:intergenic 25.0%
! AAATCAATGGATGAATTTGA+AGG - chr2.1:3431027-3431046 MS.gene47807:CDS 25.0%
! AACAAAACATTAGGAGATAT+AGG + chr2.1:3436426-3436445 None:intergenic 25.0%
! AATCAGAAATAGAGAAACTA+AGG - chr2.1:3432504-3432523 MS.gene47807:intron 25.0%
! AATGGTGAATGTAATATTGT+AGG - chr2.1:3432223-3432242 MS.gene47807:intron 25.0%
! AATTGTCATCCAAACAAAAT+AGG + chr2.1:3431229-3431248 None:intergenic 25.0%
! ACAATAATCATTATGACAGT+GGG - chr2.1:3436560-3436579 MS.gene47807:CDS 25.0%
! ACGTACCAAATACAAAATTA+AGG + chr2.1:3435506-3435525 None:intergenic 25.0%
! AGAGAATATTAAAAGCTCTT+TGG - chr2.1:3433451-3433470 MS.gene47807:intron 25.0%
! AGCATGTATTATTATTGGTA+AGG - chr2.1:3431986-3432005 MS.gene47807:intron 25.0%
! AGTGATGAAAACAAATTGTT+AGG - chr2.1:3436186-3436205 MS.gene47807:intron 25.0%
! AGTGTACAATATTTACTACT+TGG + chr2.1:3436157-3436176 None:intergenic 25.0%
! ATAAGAACAAGAAGAAGAAA+AGG - chr2.1:3431106-3431125 MS.gene47807:CDS 25.0%
! ATAATGTATGGAGCATAATT+TGG - chr2.1:3435776-3435795 MS.gene47807:intron 25.0%
! ATCAGAAATAGAGAAACTAA+GGG - chr2.1:3432505-3432524 MS.gene47807:intron 25.0%
! ATTATTGAGGATAAGTCAAA+TGG - chr2.1:3435707-3435726 MS.gene47807:intron 25.0%
! ATTTACCATTCCTACATATA+AGG + chr2.1:3434341-3434360 None:intergenic 25.0%
! CAAAATTAGATATGCATTGT+TGG + chr2.1:3432950-3432969 None:intergenic 25.0%
! CACTTATAACTAATAAGTCA+TGG + chr2.1:3435080-3435099 None:intergenic 25.0%
! CATACATGGATTTATTGATA+TGG - chr2.1:3434467-3434486 MS.gene47807:intron 25.0%
! CATGACTTATTAGTTATAAG+TGG - chr2.1:3435078-3435097 MS.gene47807:intron 25.0%
! CATTATTAAACACCATTTGT+TGG - chr2.1:3432123-3432142 MS.gene47807:intron 25.0%
! GATATGTAGTACTATTATGA+AGG + chr2.1:3431260-3431279 None:intergenic 25.0%
! GATATTATTCATATGGTTCA+AGG + chr2.1:3433795-3433814 None:intergenic 25.0%
! GTAGCATATATCTATATCTA+TGG - chr2.1:3435178-3435197 MS.gene47807:CDS 25.0%
! GTTTCCATGTTTAATATCTA+AGG - chr2.1:3433913-3433932 MS.gene47807:CDS 25.0%
! TAAAACCTTATATGTAGGAA+TGG - chr2.1:3434333-3434352 MS.gene47807:intron 25.0%
! TATAACTAATAAGTCATGGA+GGG + chr2.1:3435076-3435095 None:intergenic 25.0%
! TCTGTGAAATAGATAAGTAA+AGG + chr2.1:3434720-3434739 None:intergenic 25.0%
! TCTTAAAAATTACTCTAGAC+CGG - chr2.1:3434101-3434120 MS.gene47807:intron 25.0%
! TGAATATTGAGTAACTTACT+TGG + chr2.1:3436665-3436684 None:intergenic 25.0%
! TTATAACTAATAAGTCATGG+AGG + chr2.1:3435077-3435096 None:intergenic 25.0%
! TTCAATTCTTATATGTAGAG+TGG + chr2.1:3432150-3432169 None:intergenic 25.0%
! TTGATTTAATTGTCTGCAAA+GGG + chr2.1:3436773-3436792 None:intergenic 25.0%
!! AAGAGCTTTTAATATTCTCT+TGG + chr2.1:3433451-3433470 None:intergenic 25.0%
!! TTCAAATTCATCCATTGATT+TGG + chr2.1:3431028-3431047 None:intergenic 25.0%
!! TTTGATTTAATTGTCTGCAA+AGG + chr2.1:3436774-3436793 None:intergenic 25.0%
!! TTTTCCAATGATAAATACTG+TGG - chr2.1:3435429-3435448 MS.gene47807:intron 25.0%
!!! AAGAAAAAGCATTTTGAAGT+TGG - chr2.1:3436227-3436246 MS.gene47807:intron 25.0%
!!! AAGCAGATGGTTTTATATTT+TGG + chr2.1:3435157-3435176 None:intergenic 25.0%
!!! AGGTTTATTGATTTTTCCTT+TGG - chr2.1:3435890-3435909 MS.gene47807:intron 25.0%
!!! ATAGATTTATTTTGTTGCAC+TGG - chr2.1:3432973-3432992 MS.gene47807:intron 25.0%
!!! ATCTTTCTTTTTAGAAGTGA+AGG - chr2.1:3434674-3434693 MS.gene47807:intron 25.0%
!!! ATGTTTTGTTTGATTTCTTG+AGG - chr2.1:3436436-3436455 MS.gene47807:CDS 25.0%
!!! GATGGTTTTATATTTTGGAT+TGG + chr2.1:3435152-3435171 None:intergenic 25.0%
!!! TATAAAACTGACTTGTAAAG+TGG + chr2.1:3435115-3435134 None:intergenic 25.0%
!!! TGTTTTGTTTGATTTCTTGA+GGG - chr2.1:3436437-3436456 MS.gene47807:CDS 25.0%
!!! TTAATCAAAGGTATCTCTTA+AGG + chr2.1:3431567-3431586 None:intergenic 25.0%
!!! TTGGTGTAGAATAGTTTTAA+AGG + chr2.1:3432931-3432950 None:intergenic 25.0%
!!! TTTTTCCTTTGGCTTTAAAT+AGG - chr2.1:3435901-3435920 MS.gene47807:intron 25.0%
!!! TTTTTTTCTTTGCTCTAATC+AGG - chr2.1:3430852-3430871 MS.gene47807:CDS 25.0%
AAATTCTTACGAATCAATGG+TGG - chr2.1:3436830-3436849 MS.gene47807:intron 30.0%
AAGTGACACTTATGTCATTA+GGG - chr2.1:3430727-3430746 MS.gene47807:intron 30.0%
ACAAAATACACTTCTCTAGT+TGG + chr2.1:3435569-3435588 None:intergenic 30.0%
ACAAGTCTAAATTGTGAAGA+TGG - chr2.1:3437134-3437153 MS.gene47807:CDS 30.0%
ACTAAGGTTACTAGTAAAAC+TGG - chr2.1:3436309-3436328 MS.gene47807:CDS 30.0%
AGAAAAGGAAGAAATATCAC+AGG - chr2.1:3431121-3431140 MS.gene47807:CDS 30.0%
AGAAACAATTGAAAATCCTG+AGG + chr2.1:3436931-3436950 None:intergenic 30.0%
AGAGCATATACTACTTAACT+TGG - chr2.1:3435458-3435477 MS.gene47807:intron 30.0%
AGCAAATGAAACATAAAACG+AGG + chr2.1:3430657-3430676 None:intergenic 30.0%
AGTTATAGTTAGGACTTACA+AGG + chr2.1:3430463-3430482 None:intergenic 30.0%
ATAGTTAAGTATTTCACGAC+CGG + chr2.1:3433600-3433619 None:intergenic 30.0%
CACAAATTCTTACGAATCAA+TGG - chr2.1:3436827-3436846 MS.gene47807:intron 30.0%
CAGTGAGCATGTATTATTAT+TGG - chr2.1:3431981-3432000 MS.gene47807:intron 30.0%
CTCTTGATTAATACATGTGT+AGG - chr2.1:3433352-3433371 MS.gene47807:intron 30.0%
CTTATAAAGATGGCAACAAT+GGG - chr2.1:3433545-3433564 MS.gene47807:CDS 30.0%
GAAACAATTGAAAATCCTGA+GGG + chr2.1:3436930-3436949 None:intergenic 30.0%
GAAGAGAGTTAGTTATAGTT+AGG + chr2.1:3430473-3430492 None:intergenic 30.0%
GAAGATGGAAATAGAAACAA+AGG - chr2.1:3435371-3435390 MS.gene47807:intron 30.0%
GACAATAATCATTATGACAG+TGG - chr2.1:3436559-3436578 MS.gene47807:CDS 30.0%
GAGATGAATTAGACAAGATA+TGG + chr2.1:3434822-3434841 None:intergenic 30.0%
TAAATTGTGAAGATGGTTAG+TGG - chr2.1:3437141-3437160 MS.gene47807:CDS 30.0%
TAATACGACATGAGAAATTG+TGG + chr2.1:3432813-3432832 None:intergenic 30.0%
TACACATTATAGCATCTGAT+TGG + chr2.1:3433023-3433042 None:intergenic 30.0%
TATGTAGGAATGGTAAATTG+AGG - chr2.1:3434343-3434362 MS.gene47807:intron 30.0%
TCCAACTAAATCCAAATCAA+TGG - chr2.1:3431014-3431033 MS.gene47807:CDS 30.0%
TCTGAATAGGTAAATTCGAA+CGG - chr2.1:3434198-3434217 MS.gene47807:intron 30.0%
TCTTGATGAGTCAAGAATAA+TGG - chr2.1:3433496-3433515 MS.gene47807:CDS 30.0%
TCTTGTCTAATTCATCTCAT+TGG - chr2.1:3434824-3434843 MS.gene47807:CDS 30.0%
TGACAAATTATGATTCCATG+CGG - chr2.1:3434863-3434882 MS.gene47807:CDS 30.0%
TGACAAGCAAAAGAAAATGA+TGG - chr2.1:3434521-3434540 MS.gene47807:intron 30.0%
TTACAGCATCAAGAAAACAT+TGG + chr2.1:3433736-3433755 None:intergenic 30.0%
TTCGAATTTACCTATTCAGA+CGG + chr2.1:3434198-3434217 None:intergenic 30.0%
! ACTTATGTTGCATGTTTTTC+AGG - chr2.1:3432448-3432467 MS.gene47807:intron 30.0%
! AGCTCTTTGGATTTTTATAC+TGG - chr2.1:3433464-3433483 MS.gene47807:intron 30.0%
! AGGAAAAAAAAAGAGCATAG+TGG + chr2.1:3431195-3431214 None:intergenic 30.0%
! ATTTATTGAAGAGGTGTACT+TGG - chr2.1:3432094-3432113 MS.gene47807:intron 30.0%
! TACTACCTATTTAAAGCCAA+AGG + chr2.1:3435909-3435928 None:intergenic 30.0%
! TAGACTAGTTAGACAAATTG+CGG - chr2.1:3432728-3432747 MS.gene47807:intron 30.0%
! TTTCTTGCTGTAAATCTGAA+AGG - chr2.1:3434437-3434456 MS.gene47807:intron 30.0%
! TTTCTTTTGCTTGTCATGTT+TGG + chr2.1:3434517-3434536 None:intergenic 30.0%
!! TCCATTGATTTGGATTTAGT+TGG + chr2.1:3431018-3431037 None:intergenic 30.0%
!! TGAATTAACCACAGTTTTGA+CGG - chr2.1:3431916-3431935 MS.gene47807:CDS 30.0%
!! TGGCTTTAAATAGGTAGTAT+GGG - chr2.1:3435910-3435929 MS.gene47807:intron 30.0%
!! TGTAACTTGTTTAAGTGCAT+AGG - chr2.1:3431647-3431666 MS.gene47807:intron 30.0%
!! TTCAATTGTTTCTGATGGTT+TGG - chr2.1:3436938-3436957 MS.gene47807:intron 30.0%
!! TTGGCTTTAAATAGGTAGTA+TGG - chr2.1:3435909-3435928 MS.gene47807:intron 30.0%
!! TTTGTGCTGTTTCTTCTATA+TGG - chr2.1:3436397-3436416 MS.gene47807:CDS 30.0%
!! TTTTTAAGGAGCAAAAGCAA+TGG + chr2.1:3430323-3430342 None:intergenic 30.0%
!!! GAAGTGTGTTGTGTTTTTTA+AGG + chr2.1:3430337-3430356 None:intergenic 30.0%
!!! GGATTTTCAATTGTTTCTGA+TGG - chr2.1:3436933-3436952 MS.gene47807:intron 30.0%
AAATGGTAATTACTTCGAGG+CGG - chr2.1:3436970-3436989 MS.gene47807:intron 35.0%
AACTAATCAAGTGGTAAGTG+GGG + chr2.1:3432035-3432054 None:intergenic 35.0%
AATGATCCTAGTGAACATCT+TGG - chr2.1:3436366-3436385 MS.gene47807:CDS 35.0%
AATGGAGGAGCTTATAAAGA+TGG - chr2.1:3433535-3433554 MS.gene47807:CDS 35.0%
AATGTTCCAAGTAGATAGCT+CGG + chr2.1:3430630-3430649 None:intergenic 35.0%
ACAACTAATCAAGTGGTAAG+TGG + chr2.1:3432037-3432056 None:intergenic 35.0%
ACAGTTGACACTATATGCAA+AGG - chr2.1:3433941-3433960 MS.gene47807:CDS 35.0%
AGTTACAATCAACCAACAAG+AGG + chr2.1:3433110-3433129 None:intergenic 35.0%
ATCAATCCAAGATGTTCACT+AGG + chr2.1:3436375-3436394 None:intergenic 35.0%
ATGTTTGCAGAATCAATGGA+AGG - chr2.1:3433886-3433905 MS.gene47807:CDS 35.0%
ATTCTCAATAGTCACACTCA+CGG + chr2.1:3431449-3431468 None:intergenic 35.0%
ATTGAAGCTTCAAGAGATAC+AGG - chr2.1:3433680-3433699 MS.gene47807:intron 35.0%
CAAATTAACAATGGAGTCTG+TGG - chr2.1:3437067-3437086 MS.gene47807:CDS 35.0%
CAACAACTTAGCAAGCAATT+AGG - chr2.1:3432285-3432304 MS.gene47807:intron 35.0%
CAACTAATCAAGTGGTAAGT+GGG + chr2.1:3432036-3432055 None:intergenic 35.0%
CAAGTGACACTTATGTCATT+AGG - chr2.1:3430726-3430745 MS.gene47807:intron 35.0%
CACAGACTCCATTGTTAATT+TGG + chr2.1:3437069-3437088 None:intergenic 35.0%
CAGTGGGATATAATGTCTAA+TGG - chr2.1:3436576-3436595 MS.gene47807:CDS 35.0%
CTGAATAGGTAAATTCGAAC+GGG - chr2.1:3434199-3434218 MS.gene47807:intron 35.0%
CTTATTTATGGTCTCTCGTA+GGG + chr2.1:3432543-3432562 None:intergenic 35.0%
CTTTAAATAGGTAGTATGGG+TGG - chr2.1:3435913-3435932 MS.gene47807:intron 35.0%
GAAGAGAAAAATACAGAAGG+AGG - chr2.1:3436993-3437012 MS.gene47807:intron 35.0%
GATATATGCTACAAAGCAGA+TGG + chr2.1:3435170-3435189 None:intergenic 35.0%
GATGAACTTGAAGATGATGA+AGG - chr2.1:3431051-3431070 MS.gene47807:CDS 35.0%
GATTACCATATTGTCTGTCT+TGG - chr2.1:3431539-3431558 MS.gene47807:intron 35.0%
GCTGCCTTAGATATTAAACA+TGG + chr2.1:3433920-3433939 None:intergenic 35.0%
GCTTATAAAGATGGCAACAA+TGG - chr2.1:3433544-3433563 MS.gene47807:CDS 35.0%
GGAAATAGAAACAAAGGTAG+AGG - chr2.1:3435377-3435396 MS.gene47807:intron 35.0%
GGGATATAATGTCTAATGGT+GGG - chr2.1:3436580-3436599 MS.gene47807:intron 35.0%
GTAAAACTGGAGAAGACATA+AGG - chr2.1:3436322-3436341 MS.gene47807:CDS 35.0%
GTTGCAAATGTTAACACCAA+TGG - chr2.1:3435541-3435560 MS.gene47807:intron 35.0%
GTTGTCTTCTACTTTGTCTA+TGG + chr2.1:3435642-3435661 None:intergenic 35.0%
TAATACATGTGTAGGTAGAG+AGG - chr2.1:3433360-3433379 MS.gene47807:intron 35.0%
TAGTAACCTTAGTCCATGTA+TGG + chr2.1:3436302-3436321 None:intergenic 35.0%
TCACACTATCAGGACTTTAA+TGG - chr2.1:3434903-3434922 MS.gene47807:CDS 35.0%
TCCAATGATAAATACTGTGG+AGG - chr2.1:3435432-3435451 MS.gene47807:intron 35.0%
TCCATTGCAAATTTAGCCAA+AGG - chr2.1:3436612-3436631 MS.gene47807:intron 35.0%
TCCTCAAGCCAAATTAACAA+TGG - chr2.1:3437058-3437077 MS.gene47807:CDS 35.0%
TCCTTTGGCTAAATTTGCAA+TGG + chr2.1:3436616-3436635 None:intergenic 35.0%
TCGAATTTACCTATTCAGAC+GGG + chr2.1:3434197-3434216 None:intergenic 35.0%
TGAAAGGAACAGTTCATACA+TGG - chr2.1:3434453-3434472 MS.gene47807:intron 35.0%
TGCTATGTTTGCAGAATCAA+TGG - chr2.1:3433882-3433901 MS.gene47807:CDS 35.0%
TGGGATATAATGTCTAATGG+TGG - chr2.1:3436579-3436598 MS.gene47807:intron 35.0%
TGTATCTCTTGAAGCTTCAA+TGG + chr2.1:3433681-3433700 None:intergenic 35.0%
TTAATTCACCGTCAAAACTG+TGG + chr2.1:3431927-3431946 None:intergenic 35.0%
TTAGACAAGATATGGATGAG+AGG + chr2.1:3434814-3434833 None:intergenic 35.0%
TTGTTAACCGCAACAAATTG+TGG - chr2.1:3435049-3435068 MS.gene47807:intron 35.0%
! ATTCGTGTGCCTATTTTGTT+TGG - chr2.1:3431217-3431236 MS.gene47807:CDS 35.0%
! CTTTAGGGAAATATGCATCA+GGG - chr2.1:3433393-3433412 MS.gene47807:intron 35.0%
! GTTGGTGAGTTAAAAACAAG+GGG + chr2.1:3430608-3430627 None:intergenic 35.0%
! TCCATGGTCTGAATTTTCAA+CGG + chr2.1:3433645-3433664 None:intergenic 35.0%
! TTTTCTTTGCTCTAATCAGG+CGG - chr2.1:3430855-3430874 MS.gene47807:CDS 35.0%
!! AACCAAAATTTGACTTGCCT+TGG + chr2.1:3432318-3432337 None:intergenic 35.0%
!! AGGAGGGAGTTTTAGTAATA+TGG - chr2.1:3430918-3430937 MS.gene47807:intron 35.0%
!! AGGGAGTTTTAGTAATATGG+AGG - chr2.1:3430921-3430940 MS.gene47807:intron 35.0%
!! CGAGAAAACACTGTTTTTCT+CGG - chr2.1:3434141-3434160 MS.gene47807:intron 35.0%
!! CTAGCATAGCACTTTTTATG+CGG - chr2.1:3433150-3433169 MS.gene47807:intron 35.0%
!! GAGAAGCATTTGTAAGGATT+TGG + chr2.1:3437040-3437059 None:intergenic 35.0%
!! GAGTTTTAGTAATATGGAGG+TGG - chr2.1:3430924-3430943 MS.gene47807:intron 35.0%
!! GGTTGGTGAGTTAAAAACAA+GGG + chr2.1:3430609-3430628 None:intergenic 35.0%
!! GTAGAGGAAATTCTAAGATG+TGG - chr2.1:3435393-3435412 MS.gene47807:intron 35.0%
!! TAGCATAGCACTTTTTATGC+GGG - chr2.1:3433151-3433170 MS.gene47807:intron 35.0%
!! TCCATTGTTAATTTGGCTTG+AGG + chr2.1:3437062-3437081 None:intergenic 35.0%
!! TCTTTGGCTTTAGAAGTAGA+AGG + chr2.1:3430410-3430429 None:intergenic 35.0%
!!! TTGTTTTTGCAGATCTTCCT+CGG - chr2.1:3433705-3433724 MS.gene47807:intron 35.0%
AAAAAACAGCCCGTCTGAAT+AGG - chr2.1:3434185-3434204 MS.gene47807:intron 40.0%
AAATCGTCGTACCCAAATCA+AGG - chr2.1:3432341-3432360 MS.gene47807:intron 40.0%
AAATGCCAAACTCAAAGCTG+AGG - chr2.1:3432643-3432662 MS.gene47807:intron 40.0%
AATGGTAATTACTTCGAGGC+GGG - chr2.1:3436971-3436990 MS.gene47807:intron 40.0%
AATGGTCGTCCAATCTTGAT+TGG - chr2.1:3434921-3434940 MS.gene47807:CDS 40.0%
ACGTTCGCATTGAAGTTGAA+GGG + chr2.1:3436032-3436051 None:intergenic 40.0%
ACTGTGCAGGTTAAGATAGT+AGG + chr2.1:3431512-3431531 None:intergenic 40.0%
ACTTCTCTAGTTGGAACCAT+TGG + chr2.1:3435560-3435579 None:intergenic 40.0%
AGCAGTTGAGTGGTGAAAAA+TGG - chr2.1:3435600-3435619 MS.gene47807:intron 40.0%
AGGAACCAAGACAGACAATA+TGG + chr2.1:3431547-3431566 None:intergenic 40.0%
AGTAATATGGAGGTGGAAGA+AGG - chr2.1:3430931-3430950 MS.gene47807:intron 40.0%
AGTTGGCACAAAGAATGACA+TGG - chr2.1:3436244-3436263 MS.gene47807:intron 40.0%
ATCCTAACCGTTAGATCGAA+CGG - chr2.1:3435003-3435022 MS.gene47807:intron 40.0%
ATGTAGAGTGGTCCAACAAA+TGG + chr2.1:3432138-3432157 None:intergenic 40.0%
ATTCTCTTGGTCATGACTAG+TGG + chr2.1:3433438-3433457 None:intergenic 40.0%
CAAAATAGGCACACGAATAG+AGG + chr2.1:3431215-3431234 None:intergenic 40.0%
CCATGTACAACACTTGAAGA+TGG - chr2.1:3435356-3435375 MS.gene47807:intron 40.0%
CCTACGAGAGACCATAAATA+AGG - chr2.1:3432541-3432560 MS.gene47807:intron 40.0%
CCTCAATAATGCAACCAGAT+GGG + chr2.1:3435697-3435716 None:intergenic 40.0%
CGACAAAGTTAAGCTAGTAG+CGG - chr2.1:3433078-3433097 MS.gene47807:intron 40.0%
CGGGAAGAGAAAAATACAGA+AGG - chr2.1:3436990-3437009 MS.gene47807:intron 40.0%
CGGTTAACAAATCACGCAAT+CGG + chr2.1:3435039-3435058 None:intergenic 40.0%
CTAGACGATCCAATCAAGAT+TGG + chr2.1:3434933-3434952 None:intergenic 40.0%
CTTCTGTTAGAGTCTCACAT+CGG - chr2.1:3430687-3430706 MS.gene47807:intron 40.0%
GAAATTAGCAGCGAGTATTC+AGG - chr2.1:3430991-3431010 MS.gene47807:intron 40.0%
GAAGCTTCAATGGATCTCTT+TGG + chr2.1:3433671-3433690 None:intergenic 40.0%
GACACTATATGCAAAGGAGA+AGG - chr2.1:3433947-3433966 MS.gene47807:CDS 40.0%
GATGAAGGTGAAGATGATGA+AGG - chr2.1:3431066-3431085 MS.gene47807:CDS 40.0%
GCAGTTGAGTGGTGAAAAAT+GGG - chr2.1:3435601-3435620 MS.gene47807:intron 40.0%
GCCTCCACAGTATTTATCAT+TGG + chr2.1:3435436-3435455 None:intergenic 40.0%
GGATGTAGTAAACCAAGCAA+TGG - chr2.1:3433517-3433536 MS.gene47807:CDS 40.0%
GGCAAATGGTAATTACTTCG+AGG - chr2.1:3436967-3436986 MS.gene47807:intron 40.0%
GTAATATGGAGGTGGAAGAA+GGG - chr2.1:3430932-3430951 MS.gene47807:intron 40.0%
GTGCATAGGTCACTAATTTG+AGG - chr2.1:3431661-3431680 MS.gene47807:intron 40.0%
TAATATGGAGGTGGAAGAAG+GGG - chr2.1:3430933-3430952 MS.gene47807:intron 40.0%
TAGATTGCTCGAATCACATC+CGG + chr2.1:3436898-3436917 None:intergenic 40.0%
TCACCAGTTGAATCCTTCAT+GGG + chr2.1:3436082-3436101 None:intergenic 40.0%
TCATGACTAGTGGAACATGA+AGG + chr2.1:3433428-3433447 None:intergenic 40.0%
TCCTCAATAATGCAACCAGA+TGG + chr2.1:3435698-3435717 None:intergenic 40.0%
TCTAAGCTACGTAACCACAT+TGG + chr2.1:3433575-3433594 None:intergenic 40.0%
TCTAGACCGGATTTGACTAT+CGG - chr2.1:3434114-3434133 MS.gene47807:intron 40.0%
TGAATACCGGTAATATCCAC+AGG + chr2.1:3436864-3436883 None:intergenic 40.0%
TGTAGTAAACCAAGCAATGG+AGG - chr2.1:3433520-3433539 MS.gene47807:CDS 40.0%
TTATAAGCTCCTCCATTGCT+TGG + chr2.1:3433532-3433551 None:intergenic 40.0%
TTCTCAATAGTCACACTCAC+GGG + chr2.1:3431448-3431467 None:intergenic 40.0%
TTCTGAACAGATCAGAGTCA+TGG - chr2.1:3431149-3431168 MS.gene47807:CDS 40.0%
TTTCGCACATTCACACTATC+AGG - chr2.1:3434893-3434912 MS.gene47807:CDS 40.0%
TTTCTTTGCTCTAATCAGGC+GGG - chr2.1:3430856-3430875 MS.gene47807:CDS 40.0%
! AAGCTTCCATACATGGACTA+AGG - chr2.1:3436293-3436312 MS.gene47807:intron 40.0%
! AGTTAAGCTAGTAGCGGTTT+TGG - chr2.1:3433084-3433103 MS.gene47807:intron 40.0%
! ATTGTTAGGTGTTGCCACAT+TGG - chr2.1:3436200-3436219 MS.gene47807:intron 40.0%
! CCATCTTCAAGTGTTGTACA+TGG + chr2.1:3435359-3435378 None:intergenic 40.0%
! CCTTATTTATGGTCTCTCGT+AGG + chr2.1:3432544-3432563 None:intergenic 40.0%
! CTCCAAGGCAAGTCAAATTT+TGG - chr2.1:3432313-3432332 MS.gene47807:intron 40.0%
! GCGTTTTCTGCATTTCACTA+GGG + chr2.1:3435675-3435694 None:intergenic 40.0%
! GGAGAAGGTTCTAACAAGAA+TGG - chr2.1:3433962-3433981 MS.gene47807:CDS 40.0%
! TTTCTGATGGTTTGGAGTCA+AGG - chr2.1:3436946-3436965 MS.gene47807:intron 40.0%
!! CATAACCTCAGCTTTGAGTT+TGG + chr2.1:3432651-3432670 None:intergenic 40.0%
!! CGCATAAAAAGTGCTATGCT+AGG + chr2.1:3433152-3433171 None:intergenic 40.0%
!! CGGTTGGTGAGTTAAAAACA+AGG + chr2.1:3430610-3430629 None:intergenic 40.0%
!! CTTGAGGAGAAGCATTTGTA+AGG + chr2.1:3437046-3437065 None:intergenic 40.0%
!! GCTTTAGGGAAATATGCATC+AGG - chr2.1:3433392-3433411 MS.gene47807:intron 40.0%
!! GTAATCATAGAGTACTGTGC+AGG + chr2.1:3431525-3431544 None:intergenic 40.0%
!! TGATTTGGGTACGACGATTT+TGG + chr2.1:3432341-3432360 None:intergenic 40.0%
!! TTGGCTTTAGAAGTAGAAGG+AGG + chr2.1:3430407-3430426 None:intergenic 40.0%
!!! CGAACGTCTAGTTTTCTTCA+TGG - chr2.1:3436045-3436064 MS.gene47807:intron 40.0%
AAATGCAGAAAACGCCCATC+TGG - chr2.1:3435680-3435699 MS.gene47807:intron 45.0%
AGAAAACATTGGACGATCCG+AGG + chr2.1:3433725-3433744 None:intergenic 45.0%
AGATACTGCAAGCAGTTGAG+TGG - chr2.1:3435590-3435609 MS.gene47807:intron 45.0%
AGCAATTAGGTCTTGCTCCA+AGG - chr2.1:3432298-3432317 MS.gene47807:intron 45.0%
ATTGCCTCTGTCTTGTCCTT+TGG + chr2.1:3436631-3436650 None:intergenic 45.0%
CAACAATGGGTGAACCAATG+TGG - chr2.1:3433558-3433577 MS.gene47807:intron 45.0%
CACAAACAGAGATGGTGCAA+TGG - chr2.1:3432592-3432611 MS.gene47807:intron 45.0%
CACATCCTGATGAAAAGCAG+AGG - chr2.1:3432262-3432281 MS.gene47807:intron 45.0%
CATTGCACCATCTCTGTTTG+TGG + chr2.1:3432594-3432613 None:intergenic 45.0%
CCCATCTGGTTGCATTATTG+AGG - chr2.1:3435694-3435713 MS.gene47807:intron 45.0%
CTAGACCGGATTTGACTATC+GGG - chr2.1:3434115-3434134 MS.gene47807:intron 45.0%
CTCACCAGTTGAATCCTTCA+TGG + chr2.1:3436083-3436102 None:intergenic 45.0%
GACGTTCGCATTGAAGTTGA+AGG + chr2.1:3436033-3436052 None:intergenic 45.0%
GCCGTTGAAAATTCAGACCA+TGG - chr2.1:3433641-3433660 MS.gene47807:intron 45.0%
GGTATTCAATCCGTGATGAC+CGG - chr2.1:3436876-3436895 MS.gene47807:intron 45.0%
GGTGAAGATGATGAAGGTGA+TGG - chr2.1:3431072-3431091 MS.gene47807:CDS 45.0%
GTGCATCAAGCTTCCATACA+TGG - chr2.1:3436286-3436305 MS.gene47807:intron 45.0%
GTTCCCATGAAGGATTCAAC+TGG - chr2.1:3436076-3436095 MS.gene47807:intron 45.0%
TACGCACCTGTGGATATTAC+CGG - chr2.1:3436855-3436874 MS.gene47807:intron 45.0%
TATCGCACCATTGTCAACAG+TGG - chr2.1:3435974-3435993 MS.gene47807:intron 45.0%
TCTGCACACATTGACAACGT+TGG + chr2.1:3430368-3430387 None:intergenic 45.0%
TGAAAATCCTGAGGGCAGTA+TGG + chr2.1:3436922-3436941 None:intergenic 45.0%
TGGAGAGGGAAAGAAGTCTT+TGG + chr2.1:3430426-3430445 None:intergenic 45.0%
TGGTTACGTAGCTTAGAGAC+CGG - chr2.1:3433578-3433597 MS.gene47807:intron 45.0%
TTAGCCAAAGGACAAGACAG+AGG - chr2.1:3436624-3436643 MS.gene47807:intron 45.0%
TTCCAAGTAGATAGCTCGGT+TGG + chr2.1:3430626-3430645 None:intergenic 45.0%
TTCTTTGCTCTAATCAGGCG+GGG - chr2.1:3430857-3430876 MS.gene47807:CDS 45.0%
! CTAATCAGGCGGGGATTTTT+CGG - chr2.1:3430866-3430885 MS.gene47807:CDS 45.0%
! GATGATGAAGGTGATGGTGA+TGG - chr2.1:3431078-3431097 MS.gene47807:CDS 45.0%
! GGCGTTTTCTGCATTTCACT+AGG + chr2.1:3435676-3435695 None:intergenic 45.0%
! GGTCATCACGGATTGAATAC+CGG + chr2.1:3436877-3436896 None:intergenic 45.0%
! TGGATCTCTTTGGTCTTCCA+TGG + chr2.1:3433661-3433680 None:intergenic 45.0%
! TGGTTTGGAGTCAAGGCAAA+TGG - chr2.1:3436953-3436972 MS.gene47807:intron 45.0%
!! CTCTGCTTTTCATCAGGATG+TGG + chr2.1:3432264-3432283 None:intergenic 45.0%
!! GCTTTTTCTTCCAGCCAATG+TGG + chr2.1:3436217-3436236 None:intergenic 45.0%
!! GGGGCAACAAGCCTTATTTA+TGG + chr2.1:3432555-3432574 None:intergenic 45.0%
!! TCAACAGTGGCCTAGCTTTT+GGG - chr2.1:3435987-3436006 MS.gene47807:intron 45.0%
!! TGTTGCCTCTGCTTTTCATC+AGG + chr2.1:3432270-3432289 None:intergenic 45.0%
!!! ATATTTTATTTTATTATAAG+TGG - chr2.1:3434490-3434509 MS.gene47807:intron 5.0%
AATCTAGCCATACTGCCCTC+AGG - chr2.1:3436912-3436931 MS.gene47807:intron 50.0%
AATGCCTTGCCCCAAAAGCT+AGG + chr2.1:3436000-3436019 None:intergenic 50.0%
AATGGTGGTATACGCACCTG+TGG - chr2.1:3436845-3436864 MS.gene47807:intron 50.0%
ACAAGGCTAAGAGAGAGAGC+TGG + chr2.1:3430446-3430465 None:intergenic 50.0%
AGAGGCTGAGAGCAGCTTTA+GGG - chr2.1:3433378-3433397 MS.gene47807:intron 50.0%
AGCTAGGCCACTGTTGACAA+TGG + chr2.1:3435984-3436003 None:intergenic 50.0%
ATGGTGCAGTGCAACTGGTA+AGG - chr2.1:3433981-3434000 MS.gene47807:CDS 50.0%
CAAATCACGCAATCGGACAC+CGG + chr2.1:3435032-3435051 None:intergenic 50.0%
CAAGAATGGTGCAGTGCAAC+TGG - chr2.1:3433976-3433995 MS.gene47807:CDS 50.0%
CACCAACCGAGCTATCTACT+TGG - chr2.1:3430621-3430640 MS.gene47807:CDS 50.0%
CACCATCTCTGTTTGTGGTG+GGG + chr2.1:3432589-3432608 None:intergenic 50.0%
CGAATCACATCCGGTCATCA+CGG + chr2.1:3436889-3436908 None:intergenic 50.0%
CGTGTCCCGATAGTCAAATC+CGG + chr2.1:3434123-3434142 None:intergenic 50.0%
CTAAGAGAGAGAGCTGGAGA+GGG + chr2.1:3430440-3430459 None:intergenic 50.0%
GACCGTTCGATCTAACGGTT+AGG + chr2.1:3435008-3435027 None:intergenic 50.0%
GCAAACGGTAGCTACTAGCT+AGG - chr2.1:3434004-3434023 MS.gene47807:CDS 50.0%
GCACCATCTCTGTTTGTGGT+GGG + chr2.1:3432590-3432609 None:intergenic 50.0%
GGATGAAACTCGTCGAACTG+AGG - chr2.1:3436458-3436477 MS.gene47807:CDS 50.0%
GGCAACAAACGTTCCCATGA+AGG - chr2.1:3436066-3436085 MS.gene47807:intron 50.0%
GTGCAACTGGTAAGGGCAAA+CGG - chr2.1:3433989-3434008 MS.gene47807:CDS 50.0%
GTGCGAAAAAAGTGACCGCA+TGG + chr2.1:3434881-3434900 None:intergenic 50.0%
TACAATAGGAGGTGAGCGTG+TGG - chr2.1:3430966-3430985 MS.gene47807:intron 50.0%
TGCACCATCTCTGTTTGTGG+TGG + chr2.1:3432591-3432610 None:intergenic 50.0%
TGGTGCAGTGCAACTGGTAA+GGG - chr2.1:3433982-3434001 MS.gene47807:CDS 50.0%
! GAGGAAGGGAGTACAATAGG+AGG - chr2.1:3430955-3430974 MS.gene47807:intron 50.0%
! GGTAGTATGGGTGGAGCATT+TGG - chr2.1:3435922-3435941 MS.gene47807:intron 50.0%
! TTAGGTGTTGCCACATTGGC+TGG - chr2.1:3436204-3436223 MS.gene47807:intron 50.0%
!! CAACAGTGGCCTAGCTTTTG+GGG - chr2.1:3435988-3436007 MS.gene47807:intron 50.0%
!! GGAGGGACCACAATTTGTTG+CGG + chr2.1:3435059-3435078 None:intergenic 50.0%
!! GTCAACAGTGGCCTAGCTTT+TGG - chr2.1:3435986-3436005 MS.gene47807:intron 50.0%
!! TAGCACTTTTTATGCGGGCG+TGG - chr2.1:3433156-3433175 MS.gene47807:intron 50.0%
!! TAGCGGTTTTGGCCTCTTGT+TGG - chr2.1:3433095-3433114 MS.gene47807:intron 50.0%
!!! TAGCTTTTGGGGCAAGGCAT+TGG - chr2.1:3435999-3436018 MS.gene47807:intron 50.0%
AATAGGAGGTGAGCGTGTGG+AGG - chr2.1:3430969-3430988 MS.gene47807:intron 55.0%
AGGTGGAAGAAGGGGAGGAA+GGG - chr2.1:3430941-3430960 MS.gene47807:intron 55.0%
CCGGTGACCGTTCGATCTAA+CGG + chr2.1:3435013-3435032 None:intergenic 55.0%
CCGTTAGATCGAACGGTCAC+CGG - chr2.1:3435010-3435029 MS.gene47807:intron 55.0%
GAGAGGCTGAGAGCAGCTTT+AGG - chr2.1:3433377-3433396 MS.gene47807:intron 55.0%
GCTAAGAGAGAGAGCTGGAG+AGG + chr2.1:3430441-3430460 None:intergenic 55.0%
GTCCCCACCACAAACAGAGA+TGG - chr2.1:3432584-3432603 MS.gene47807:intron 55.0%
TATGGAGGTGGAAGAAGGGG+AGG - chr2.1:3430936-3430955 MS.gene47807:intron 55.0%
! GGGGAGGAAGGGAGTACAAT+AGG - chr2.1:3430952-3430971 MS.gene47807:intron 55.0%
!! AAGGCTTGTTGCCCCAACTG+TGG - chr2.1:3432560-3432579 MS.gene47807:intron 55.0%
!! AGGCTTGTTGCCCCAACTGT+GGG - chr2.1:3432561-3432580 MS.gene47807:intron 55.0%
!! GATTTTTCGGCATGGCGGTG+CGG - chr2.1:3430879-3430898 MS.gene47807:intron 55.0%
GAGGTGGAAGAAGGGGAGGA+AGG - chr2.1:3430940-3430959 MS.gene47807:intron 60.0%
!! CAGGCGGGGATTTTTCGGCA+TGG - chr2.1:3430871-3430890 MS.gene47807:CDS 60.0%
!! GCGGGGATTTTTCGGCATGG+CGG - chr2.1:3430874-3430893 MS.gene47807:intron 60.0%
!! GGCTTGTTGCCCCAACTGTG+GGG - chr2.1:3432562-3432581 MS.gene47807:intron 60.0%
!!! GTGGCCTAGCTTTTGGGGCA+AGG - chr2.1:3435993-3436012 MS.gene47807:intron 60.0%
TGGTGGGGACCCCACAGTTG+GGG + chr2.1:3432574-3432593 None:intergenic 65.0%
! GTGGTGGGGACCCCACAGTT+GGG + chr2.1:3432575-3432594 None:intergenic 65.0%
! TGTGGTGGGGACCCCACAGT+TGG + chr2.1:3432576-3432595 None:intergenic 65.0%
! TTTTCGGCATGGCGGTGCGG+CGG - chr2.1:3430882-3430901 MS.gene47807:intron 65.0%
CGGCGGGGGAGGGTGAAGGA+GGG - chr2.1:3430902-3430921 MS.gene47807:intron 75.0%
! GCGGCGGGGGAGGGTGAAGG+AGG - chr2.1:3430901-3430920 MS.gene47807:intron 80.0%
! TCGGCATGGCGGTGCGGCGG+CGG - chr2.1:3430885-3430904 MS.gene47807:intron 80.0%
! CGGCATGGCGGTGCGGCGGC+GGG - chr2.1:3430886-3430905 MS.gene47807:intron 85.0%
! GCATGGCGGTGCGGCGGCGG+GGG - chr2.1:3430888-3430907 MS.gene47807:intron 85.0%
! GCGGCGGCGGGGGAGGGTGA+AGG - chr2.1:3430898-3430917 MS.gene47807:intron 85.0%
! GGCATGGCGGTGCGGCGGCG+GGG - chr2.1:3430887-3430906 MS.gene47807:intron 85.0%
! GGCGGTGCGGCGGCGGGGGA+GGG - chr2.1:3430892-3430911 MS.gene47807:intron 90.0%
! TGGCGGTGCGGCGGCGGGGG+AGG - chr2.1:3430891-3430910 MS.gene47807:intron 90.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 3430311 3437160 3430311 ID=MS.gene47807
chr2.1 mRNA 3430311 3437160 3430311 ID=MS.gene47807.t1;Parent=MS.gene47807
chr2.1 exon 3437008 3437160 3437008 ID=MS.gene47807.t1.exon1;Parent=MS.gene47807.t1
chr2.1 CDS 3437008 3437160 3437008 ID=cds.MS.gene47807.t1;Parent=MS.gene47807.t1
chr2.1 exon 3436296 3436597 3436296 ID=MS.gene47807.t1.exon2;Parent=MS.gene47807.t1
chr2.1 CDS 3436296 3436597 3436296 ID=cds.MS.gene47807.t1;Parent=MS.gene47807.t1
chr2.1 exon 3435109 3435226 3435109 ID=MS.gene47807.t1.exon3;Parent=MS.gene47807.t1
chr2.1 CDS 3435109 3435226 3435109 ID=cds.MS.gene47807.t1;Parent=MS.gene47807.t1
chr2.1 exon 3434807 3435001 3434807 ID=MS.gene47807.t1.exon4;Parent=MS.gene47807.t1
chr2.1 CDS 3434807 3435001 3434807 ID=cds.MS.gene47807.t1;Parent=MS.gene47807.t1
chr2.1 exon 3433720 3434097 3433720 ID=MS.gene47807.t1.exon5;Parent=MS.gene47807.t1
chr2.1 CDS 3433720 3434097 3433720 ID=cds.MS.gene47807.t1;Parent=MS.gene47807.t1
chr2.1 exon 3433474 3433575 3433474 ID=MS.gene47807.t1.exon6;Parent=MS.gene47807.t1
chr2.1 CDS 3433474 3433575 3433474 ID=cds.MS.gene47807.t1;Parent=MS.gene47807.t1
chr2.1 exon 3431732 3431941 3431732 ID=MS.gene47807.t1.exon7;Parent=MS.gene47807.t1
chr2.1 CDS 3431732 3431941 3431732 ID=cds.MS.gene47807.t1;Parent=MS.gene47807.t1
chr2.1 exon 3431374 3431548 3431374 ID=MS.gene47807.t1.exon8;Parent=MS.gene47807.t1
chr2.1 CDS 3431374 3431548 3431374 ID=cds.MS.gene47807.t1;Parent=MS.gene47807.t1
chr2.1 exon 3430992 3431263 3430992 ID=MS.gene47807.t1.exon9;Parent=MS.gene47807.t1
chr2.1 CDS 3430992 3431263 3430992 ID=cds.MS.gene47807.t1;Parent=MS.gene47807.t1
chr2.1 exon 3430806 3430892 3430806 ID=MS.gene47807.t1.exon10;Parent=MS.gene47807.t1
chr2.1 CDS 3430806 3430892 3430806 ID=cds.MS.gene47807.t1;Parent=MS.gene47807.t1
chr2.1 exon 3430311 3430691 3430311 ID=MS.gene47807.t1.exon11;Parent=MS.gene47807.t1
chr2.1 CDS 3430311 3430691 3430311 ID=cds.MS.gene47807.t1;Parent=MS.gene47807.t1
Gene Sequence

>MS.gene47807

ATGACACAACCATTGCTTTTGCTCCTTAAAAAACACAACACACTTCTTTCTTCACCAACGTTGTCAATGTGTGCAGACATGTCTAATAATAATCCTCCTTCTACTTCTAAAGCCAAAGACTTCTTTCCCTCTCCAGCTCTCTCTCTTAGCCTTGTAAGTCCTAACTATAACTAACTCTCTTCTTTATTTCTTCTTCACATTTCTTCAATATTTTCTTATTTAAACGTTATTAAGTTTGTAGTTACATTAGTTTTTATGATTAAATTTTGAACCTCTAGTCAAATTTTTGTTTTTCCCCTTGTTTTTAACTCACCAACCGAGCTATCTACTTGGAACATTTCTTCCTCGTTTTATGTTTCATTTGCTTTATATGTTTCTTCTGTTAGAGTCTCACATCGGATAGATAAAATTATTTCAAGTGACACTTATGTCATTAGGGTTATTAATAATAATTTTTTTTCCTATGAGTTTTCTTTTAAAATTTTTGAGACTTTCCATCTAATGAACTAATTTTTAAGTTGGACTTTAAGTTCTAACATATTTTTTTTCTTTGCTCTAATCAGGCGGGGATTTTTCGGCATGGCGGTGCGGCGGCGGGGGAGGGTGAAGGAGGGAGTTTTAGTAATATGGAGGTGGAAGAAGGGGAGGAAGGGAGTACAATAGGAGGTGAGCGTGTGGAGGAAATTAGCAGCGAGTATTCAGGTCCAACTAAATCCAAATCAATGGATGAATTTGAAGGAGATGAACTTGAAGATGATGAAGGTGAAGATGATGAAGGTGATGGTGATGGTGATAATAAGAACAAGAAGAAGAAAAGGAAGAAATATCACAGGCACACTTCTGAACAGATCAGAGTCATGGAAGCGTGCGTATAGTATAATCCACTATGCTCTTTTTTTTTCCTCTATTCGTGTGCCTATTTTGTTTGGATGACAATTAATACTCTCCTTCATAATAGTACTACATATCACTTTAAAGAATTTTAATTTGTCTCATTCTATTTATCAATTTAAATAACAAATATACTATTAATTATTTTTTATAGTTTGTCAAAAAAAAGTATACTGATAATTAATAATTTTTTAACAAGTGTGTATCATATTACTAATTTAAAAGGCAGATATCATTGAATCACCCGTGAGTGTGACTATTGAGAATTCAGTGTTATGAGTTTCTTATATTTTTTCTATTTTTAGTTCCTACTATCTTAACCTGCACAGTACTCTATGATTACCATATTGTCTGTCTTGGTTCCTTAAGAGATACCTTTGATTAATATAGTTATATTTGTTTGAATAAAAGAATGACTAGTGTGATGATTCTCTGTTCTTATTTATGTAACTTGTTTAAGTGCATAGGTCACTAATTTGAGGTTACCAATGAAATTTCTTTTTCTTCAAAGTTATATAGTATATAGTCCATGTGATTACATTTTATAATATATTGAACAGCTTTTGCTTTAATTGTTTATTTGATATCTTATATATGATTATAAAAATGTTTCACACTTACTTTTTCATAGATAATCACGTACAAAAATATGATTAATTCAGTTGAAAATAAGTTAACTTAATTTGGATTGAAAATTTGGTCAACTCATATGATTGAATTAACCACAGTTTTGACGGTGAATTAAATTAAAAATGTAATCAACTAGGGTTTAGAAAAGTCAGTGAGCATGTATTATTATTGGTAAGGTTATGTCTTTGTAAAACATTTTTCCCCACTTACCACTTGATTAGTTGTTTGTTTTTTACAATACCTATTGATAAGATTGTAGTATATTTATTGAAGAGGTGTACTTGGCGTTTGCATTATTAAACACCATTTGTTGGACCACTCTACATATAAGAATTGAAGCATGTTGTGAAAAATAAATTAAATTCAATAACAAAAAAAAAAAAATTACATGAATGGTGAATGTAATATTGTAGGCTTTTCAAAGAGTCACCACATCCTGATGAAAAGCAGAGGCAACAACTTAGCAAGCAATTAGGTCTTGCTCCAAGGCAAGTCAAATTTTGGTTCCAAAATCGTCGTACCCAAATCAAGGTATTATTTAAATCAACTAATAAAAAAAGTGTGCTAATTTTTGCATTTTAATTATTAAGTGAATTTAACAATAATATTAAGCATTACTTATGTTGCATGTTTTTCAGGCAATACAAGAGCGACATGAAAATTCATTGTTGAAATCAGAAATAGAGAAACTAAGGGAGAAAAATAAGACCCTACGAGAGACCATAAATAAGGCTTGTTGCCCCAACTGTGGGGTCCCCACCACAAACAGAGATGGTGCAATGGCAACTGAAGAACAACAACTACGTATTGAAAATGCCAAACTCAAAGCTGAGGTTATGATTAGAAATATCTCAAACTATACATCATCACTTTTTTATTTCAATACTTAAAAAAATTAGACTAGTTAGACAAATTGCGGAGAAAACAATATATACATTGTTGATGTAAAACAATTTTACAATCACATTCAATGAGAGACCACAATTTCTCATGTCGTATTATCAATTTCAAAATATCTTTTAAAAATGAGGTAATACGGAAAAATAATGAATTTTCATTGGATGTCGTAAAACTATTTTACATCGACAATGCATATCCTTTAAAACTATTCTACACCAACAATGCATATCTAATTTTGTTTATAGATTTATTTTGTTGCACTGGTGTAATTTTTTTTTACAATGTCAACCAATCAGATGCTATAATGTGTATGATGCTTAAAAATAATCTAATAGCTATGATCGATCGACAAAGTTAAGCTAGTAGCGGTTTTGGCCTCTTGTTGGTTGATTGTAACTCATGTAACTTTATTTGAGTCCTAGCATAGCACTTTTTATGCGGGCGTGGAGCTCCATTGATTAATATATTCCATTTTTTTAGCTAGTACTTTATCATGTATAGTAATTTTGTATCAATGCATGTCAACTAAATCATTTTGATTATCTATAATTAGCTAGTAGTTTATCATGTCTATTAATTTTTTTTACAATAAAAATTAAATTATAGATTGTAAAATTACACTCTTGATTAATACATGTGTAGGTAGAGAGGCTGAGAGCAGCTTTAGGGAAATATGCATCAGGGACAATGTCACCTTCATGTTCCACTAGTCATGACCAAGAGAATATTAAAAGCTCTTTGGATTTTTATACTGGAATTTTTGGTCTTGATGAGTCAAGAATAATGGATGTAGTAAACCAAGCAATGGAGGAGCTTATAAAGATGGCAACAATGGGTGAACCAATGTGGTTACGTAGCTTAGAGACCGGTCGTGAAATACTTAACTATGATGAATATATGAAGGAGTTTGCCGTTGAAAATTCAGACCATGGAAGACCAAAGAGATCCATTGAAGCTTCAAGAGATACAGGAATTGTTTTTGCAGATCTTCCTCGGATCGTCCAATGTTTTCTTGATGCTGTAAGACATAAATTAATGCTTATACATTGAATTATCATATCCTTGAACCATATGAATAATATCATTGCATGCACATAAAAAAATATTATATCCTTTTGTTTTGTAGAAGTTTAACAATATTTACTTATTGTGCTATGTTTGCAGAATCAATGGAAGGAAATGTTTCCATGTTTAATATCTAAGGCAGCAACAGTTGACACTATATGCAAAGGAGAAGGTTCTAACAAGAATGGTGCAGTGCAACTGGTAAGGGCAAACGGTAGCTACTAGCTAGGTATCTTTGATATTGAATTAGATGGGCCTACTAAATTAATGAATTTCTTTTAGGTGCTTTTTTCTTTCCTACAATTCTTAAAAATTACTCTAGACCGGATTTGACTATCGGGACACGAGAAAACACTGTTTTTCTCGGATTCACTCATCTAGACACGAGAAAAAACAGCCCGTCTGAATAGGTAAATTCGAACGGGTGTAATTTTTAAAAGTATATTAGTTCATTTTTTATGAGTACCTATCAAAAAAGACATTATGAAGTTTACAAATTCACACACCAACTATTAATTAGTTAATGAAAGATTTCATAAAACCTTATATGTAGGAATGGTAAATTGAGGAAAAAAGTTTCTTATAACTTCAGTCGTTTTCATTCACTGATTTTAACTTCAAATGTCTGAAATAAAATTTATTTCTTGCTGTAAATCTGAAAGGAACAGTTCATACATGGATTTATTGATATGGATATTTTATTTTATTATAAGTGGTCCAAACATGACAAGCAAAAGAAAATGATGGTACATTGTAATTTTAAATGATATTTCCTATGTTTGAAAATTCTATTCTAATGTTGTAAATGTTTTAGTGGATAAAAAAAAGATTAAGTTGATTGTGGTAGAATTATATGCTTTTGATTATAGTATGGTTAATCTTTCTTTTTAGAAGTGAAGGTTCTTGTCAACTTTTCATCTCCTTTACTTATCTATTTCACAGAAATATAGATAAAGACACGTAAAATATAAAAAGTTCAATGTCATTTAAACTTTAGTAACACTTTGGAATTTTCCTCTCATCCATATCTTGTCTAATTCATCTCATTGGAATCTCTCGCTCTTCATGACAAATTATGATTCCATGCGGTCACTTTTTTCGCACATTCACACTATCAGGACTTTAATGGTCGTCCAATCTTGATTGGATCGTCTAGAAAAAGCAGATTTAATTTTTATTATATAATTTTTAAAATGCTGAACTTAAATCCTAACCGTTAGATCGAACGGTCACCGGTGTCCGATTGCGTGATTTGTTAACCGCAACAAATTGTGGTCCCTCCATGACTTATTAGTTATAAGTGGTGTGTATCTAACCACTTTACAAGTCAGTTTTATAAAGTTGATTTAGGTCCAATCCAAAATATAAAACCATCTGCTTTGTAGCATATATCTATATCTATGGATATTCTAGTTTTTCACTTTTGTTTGAAAATAGTTAAATGTTGTAATTCTATAACGCAATTTAAATTAAAATTCTAGGATTAAATAAAAGTACTTTGGATTAAATACAAAATTTATAAACAACTATACATATAAAATGAGGCAGTAAGATTTATTCCATGTACAACACTTGAAGATGGAAATAGAAACAAAGGTAGAGGAAATTCTAAGATGTGGACACATTGCACAGTTTTCCAATGATAAATACTGTGGAGGCACAGAGCATATACTACTTAACTTGGACATGAAATCATAAAACTTTAACCTTAATTTTGTATTTGGTACGTACAGATGTTTGCTGAGTTGCAAATGTTAACACCAATGGTTCCAACTAGAGAAGTGTATTTTGTCAGATACTGCAAGCAGTTGAGTGGTGAAAAATGGGCTATTGTTGATGTGTCCATAGACAAAGTAGAAGACAACATTGACAAGTCCCTAGTGAAATGCAGAAAACGCCCATCTGGTTGCATTATTGAGGATAAGTCAAATGGACATTGCAAAGTATGTAATAGCAGCATTTGTTTCCATTTTTGTTACATAATGTATGGAGCATAATTTGGACCTATATGATTTTGTTTTCTTTATTCAATTTATGTGACAAGTTATATTTTTTTAACTCAATGTAAAATTCTTTTGATATTATTTTTATGAAGGTTTATTGATTTTTCCTTTGGCTTTAAATAGGTAGTATGGGTGGAGCATTTGGAGTGTCAAAAGAGTGTAGTTCATTCAATGTATCGCACCATTGTCAACAGTGGCCTAGCTTTTGGGGCAAGGCATTGGATTGCGACCCTTCAACTTCAATGCGAACGTCTAGTTTTCTTCATGGCAACAAACGTTCCCATGAAGGATTCAACTGGTGAGTAAATTAAGAATTATCATAAGAAAAAGGTTATTTTGTAAAATAGTACTTTACCAAGTAGTAAATATTGTACACTAAAATGATTAGTGATGAAAACAAATTGTTAGGTGTTGCCACATTGGCTGGAAGAAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGAGTTTCTGTCAAGCAATTAGTGCATCAAGCTTCCATACATGGACTAAGGTTACTAGTAAAACTGGAGAAGACATAAGGATTAGCTCTAGAAAGAACTTGAATGATCCTAGTGAACATCTTGGATTGATAGTTTGTGCTGTTTCTTCTATATGGTTGCCTATATCTCCTAATGTTTTGTTTGATTTCTTGAGGGATGAAACTCGTCGAACTGAGGTACCGAGTTTAATATAGTGATTCAATCATATTTTACCTGAGATATTTTGTATATGAATTTAGAGGGGATGTTTGTGTTGACAATAATCATTATGACAGTGGGATATAATGTCTAATGGTGGGACAGTGCAATCCATTGCAAATTTAGCCAAAGGACAAGACAGAGGCAATGCAGTAACTATCCAAGTAAGTTACTCAATATTCAAAACTGAACATATTGTTGAACAAAATGCAAGTTACATTTAAAACGTTTTCAAACTTCTAAGAAAAATAAGAGGTTTTTTTCTTCTCCCTTTGCAGACAATTAAATCAAAAGAAAACAATATGTGGATACTGCAAGATAGCTGCACAAATTCTTACGAATCAATGGTGGTATACGCACCTGTGGATATTACCGGTATTCAATCCGTGATGACCGGATGTGATTCGAGCAATCTAGCCATACTGCCCTCAGGATTTTCAATTGTTTCTGATGGTTTGGAGTCAAGGCAAATGGTAATTACTTCGAGGCGGGAAGAGAAAAATACAGAAGGAGGATCTTTGTTTACAATAGCATTCCAAATCCTTACAAATGCTTCTCCTCAAGCCAAATTAACAATGGAGTCTGTGGACTCTGTCAACTCTCTTGTATCATGTACATTGAGACACATCAAAACAAGTCTAAATTGTGAAGATGGTTAG
Protein sequence

>MS.gene47807.t1

MTQPLLLLLKKHNTLLSSPTLSMCADMSNNNPPSTSKAKDFFPSPALSLSLAGIFRHGGAAAGEGEGGSFSNMEVEEGEEGSTIGGERVEEISSEYSGPTKSKSMDEFEGDELEDDEGEDDEGDGDGDNKNKKKKRKKYHRHTSEQIRVMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKSEIEKLREKNKTLRETINKACCPNCGVPTTNRDGAMATEEQQLRIENAKLKAEVERLRAALGKYASGTMSPSCSTSHDQENIKSSLDFYTGIFGLDESRIMDVVNQAMEELIKMATMGEPMWLRSLETGREILNYDEYMKEFAVENSDHGRPKRSIEASRDTGIVFADLPRIVQCFLDANQWKEMFPCLISKAATVDTICKGEGSNKNGAVQLMFAELQMLTPMVPTREVYFVRYCKQLSGEKWAIVDVSIDKVEDNIDKSLVKCRKRPSGCIIEDKSNGHCKVVWVEHLECQKSVVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCQAISASSFHTWTKVTSKTGEDIRISSRKNLNDPSEHLGLIVCAVSSIWLPISPNVLFDFLRDETRRTEWDIMSNGGTVQSIANLAKGQDRGNAVTIQTIKSKENNMWILQDSCTNSYESMVVYAPVDITGIQSVMTGCDSSNLAILPSGFSIVSDGLESRQMVITSRREEKNTEGGSLFTIAFQILTNASPQAKLTMESVDSVNSLVSCTLRHIKTSLNCEDG