Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47927.t1 | XP_024629307.1 | 97.2 | 176 | 5 | 0 | 1 | 176 | 1 | 176 | 1.40E-38 | 169.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47927.t1 | P94077 | 75.4 | 187 | 32 | 4 | 1 | 176 | 6 | 189 | 5.7e-20 | 99.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47927.t1 | G7L9L6 | 97.2 | 176 | 5 | 0 | 1 | 176 | 1 | 176 | 1.0e-38 | 169.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene47927.t1 | TF | C2C2-LSD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47927.t1 | MTR_8g089310 | 96.591 | 176 | 6 | 0 | 1 | 176 | 48 | 223 | 3.16e-123 | 346 |
| MS.gene47927.t1 | MTR_8g089310 | 96.591 | 176 | 6 | 0 | 1 | 176 | 14 | 189 | 4.79e-123 | 344 |
| MS.gene47927.t1 | MTR_8g089310 | 96.591 | 176 | 6 | 0 | 1 | 176 | 1 | 176 | 8.69e-123 | 343 |
| MS.gene47927.t1 | MTR_2g047838 | 70.950 | 179 | 43 | 2 | 1 | 176 | 1 | 173 | 6.95e-87 | 252 |
| MS.gene47927.t1 | MTR_4g098500 | 72.566 | 113 | 31 | 0 | 2 | 114 | 5 | 117 | 7.33e-57 | 175 |
| MS.gene47927.t1 | MTR_4g098500 | 72.566 | 113 | 31 | 0 | 2 | 114 | 31 | 143 | 4.29e-56 | 174 |
| MS.gene47927.t1 | MTR_4g088850 | 51.899 | 79 | 38 | 0 | 41 | 119 | 40 | 118 | 6.23e-24 | 91.7 |
| MS.gene47927.t1 | MTR_4g088850 | 42.105 | 76 | 43 | 1 | 3 | 78 | 41 | 115 | 4.50e-11 | 58.2 |
| MS.gene47927.t1 | MTR_4g088850 | 51.316 | 76 | 37 | 0 | 41 | 116 | 40 | 115 | 1.96e-22 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47927.t1 | AT4G20380 | 71.658 | 187 | 39 | 4 | 1 | 176 | 6 | 189 | 3.18e-75 | 224 |
| MS.gene47927.t1 | AT4G20380 | 71.658 | 187 | 39 | 4 | 1 | 176 | 6 | 189 | 3.18e-75 | 224 |
| MS.gene47927.t1 | AT4G20380 | 71.658 | 187 | 39 | 4 | 1 | 176 | 1 | 184 | 5.26e-75 | 223 |
| MS.gene47927.t1 | AT4G20380 | 71.658 | 187 | 39 | 4 | 1 | 176 | 1 | 184 | 5.26e-75 | 223 |
| MS.gene47927.t1 | AT4G20380 | 71.658 | 187 | 39 | 4 | 1 | 176 | 1 | 184 | 5.26e-75 | 223 |
| MS.gene47927.t1 | AT4G20380 | 71.658 | 187 | 39 | 4 | 1 | 176 | 1 | 184 | 5.26e-75 | 223 |
| MS.gene47927.t1 | AT4G20380 | 71.658 | 187 | 39 | 4 | 1 | 176 | 1 | 184 | 5.26e-75 | 223 |
| MS.gene47927.t1 | AT4G20380 | 62.911 | 213 | 39 | 4 | 1 | 176 | 1 | 210 | 5.89e-71 | 213 |
| MS.gene47927.t1 | AT1G32540 | 72.727 | 110 | 30 | 0 | 2 | 111 | 65 | 174 | 1.34e-55 | 174 |
| MS.gene47927.t1 | AT1G32540 | 71.681 | 113 | 32 | 0 | 2 | 114 | 32 | 144 | 1.45e-54 | 170 |
| MS.gene47927.t1 | AT1G32540 | 71.681 | 113 | 32 | 0 | 2 | 114 | 32 | 144 | 1.45e-54 | 170 |
| MS.gene47927.t1 | AT1G32540 | 74.074 | 108 | 28 | 0 | 2 | 109 | 32 | 139 | 4.95e-54 | 169 |
| MS.gene47927.t1 | AT4G20380 | 68.548 | 124 | 28 | 3 | 1 | 113 | 1 | 124 | 5.37e-50 | 157 |
| MS.gene47927.t1 | AT1G32540 | 76.389 | 72 | 17 | 0 | 2 | 73 | 65 | 136 | 3.06e-36 | 123 |
| MS.gene47927.t1 | AT1G32540 | 52.941 | 68 | 31 | 1 | 42 | 108 | 66 | 133 | 1.74e-13 | 64.7 |
| MS.gene47927.t1 | AT1G32540 | 76.389 | 72 | 17 | 0 | 2 | 73 | 32 | 103 | 1.55e-35 | 120 |
| MS.gene47927.t1 | AT1G32540 | 52.941 | 68 | 31 | 1 | 42 | 108 | 33 | 100 | 1.63e-13 | 63.9 |
| MS.gene47927.t1 | AT1G32540 | 76.389 | 72 | 17 | 0 | 2 | 73 | 32 | 103 | 1.55e-35 | 120 |
| MS.gene47927.t1 | AT1G32540 | 52.941 | 68 | 31 | 1 | 42 | 108 | 33 | 100 | 1.63e-13 | 63.9 |
| MS.gene47927.t1 | AT4G21610 | 52.500 | 80 | 38 | 0 | 40 | 119 | 57 | 136 | 4.91e-24 | 92.4 |
| MS.gene47927.t1 | AT4G21610 | 49.425 | 87 | 41 | 1 | 40 | 123 | 57 | 143 | 5.18e-22 | 87.0 |
Find 50 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTGTTTGGCTCTGAGATT+GGG | 0.218971 | 4.1:+11456645 | None:intergenic |
| CCACTGTTTGGCTCTGAGAT+TGG | 0.301892 | 4.1:+11456644 | None:intergenic |
| TGTTGATTCAAGTGGGAAAT+TGG | 0.322882 | 4.1:-11456602 | MS.gene47927:intron |
| ACAACACTCATGTATCCTTA+TGG | 0.360459 | 4.1:-11458046 | MS.gene47927:CDS |
| AATGGAAGGCTTCCAATTCC+TGG | 0.374088 | 4.1:-11456850 | MS.gene47927:CDS |
| AAGTAGCCCATGTCCCTTGC+GGG | 0.401008 | 4.1:-11458078 | MS.gene47927:CDS |
| GGCAGTTCCCGCAAGGGACA+TGG | 0.407023 | 4.1:+11458071 | None:intergenic |
| CAAACATTGGTTGCCCCTCT+AGG | 0.429678 | 4.1:+11460419 | None:intergenic |
| TGAGGTCTATGACCAGGAAT+TGG | 0.430540 | 4.1:+11456838 | None:intergenic |
| ATGTCCCTTGCGGGAACTGC+CGG | 0.445439 | 4.1:-11458069 | MS.gene47927:CDS |
| CCACTTGAATCAACAGACAT+TGG | 0.458263 | 4.1:+11456610 | None:intergenic |
| CAGGTGAGCAATGTTGTTGT+TGG | 0.459951 | 4.1:-11456465 | MS.gene47927:CDS |
| AAACATACCGTTGAAGTAGA+AGG | 0.466644 | 4.1:+11456790 | None:intergenic |
| ACCTCACGGGACAACCGACT+TGG | 0.484357 | 4.1:-11456821 | MS.gene47927:CDS |
| AACGTTACCTTCTACTTCAA+CGG | 0.505058 | 4.1:-11456797 | MS.gene47927:intron |
| AGGAATTGGAAGCCTTCCAT+TGG | 0.509054 | 4.1:+11456852 | None:intergenic |
| AAACATTGGTTGCCCCTCTA+GGG | 0.521552 | 4.1:+11460420 | None:intergenic |
| GCATGTTGCTTTACCCTAGA+GGG | 0.526229 | 4.1:-11460433 | MS.gene47927:CDS |
| TTGACTGAAGGAGCTCCATA+AGG | 0.536562 | 4.1:+11458031 | None:intergenic |
| AAGGATACATGAGTGTTGTC+CGG | 0.538194 | 4.1:+11458050 | None:intergenic |
| ACTGTTTGGCTCTGAGATTG+GGG | 0.544116 | 4.1:+11456646 | None:intergenic |
| GTTGTCCGGCAGTTCCCGCA+AGG | 0.550249 | 4.1:+11458064 | None:intergenic |
| AACTTGTGTGTAATGGTTGT+AGG | 0.557278 | 4.1:-11460457 | MS.gene47927:CDS |
| GCAGTTCCCGCAAGGGACAT+GGG | 0.560859 | 4.1:+11458072 | None:intergenic |
| CAGAGTCAACTTGTGTGTAA+TGG | 0.563559 | 4.1:-11460464 | MS.gene47927:CDS |
| GATATGTCTCAACTATATTG+TGG | 0.572327 | 4.1:-11460199 | MS.gene47927:CDS |
| CCAATGTCTGTTGATTCAAG+TGG | 0.574429 | 4.1:-11456610 | MS.gene47927:CDS |
| GTCCCGTGAGGTCTATGACC+AGG | 0.577307 | 4.1:+11456832 | None:intergenic |
| CCTCACGGGACAACCGACTT+GGG | 0.585498 | 4.1:-11456820 | MS.gene47927:CDS |
| AACTATATTGTGGAGGCTGT+AGG | 0.590469 | 4.1:-11460189 | MS.gene47927:CDS |
| ATTCCTGGTCATAGACCTCA+CGG | 0.590721 | 4.1:-11456835 | MS.gene47927:CDS |
| TTGTCCGGCAGTTCCCGCAA+GGG | 0.594632 | 4.1:+11458065 | None:intergenic |
| ATTACCTCTGTTCCTCCACC+TGG | 0.595203 | 4.1:-11460377 | MS.gene47927:intron |
| CATACTGTAAACCTTGCTCC+AGG | 0.599148 | 4.1:-11460115 | MS.gene47927:intron |
| AATATACATTACCTGGAGCA+AGG | 0.599284 | 4.1:+11460104 | None:intergenic |
| CAATGTCTGTTGATTCAAGT+GGG | 0.600952 | 4.1:-11456609 | MS.gene47927:CDS |
| CGTTGGAGCTTACCAGGTGG+AGG | 0.603157 | 4.1:+11460365 | None:intergenic |
| AGAAGGTAACGTTCCCAAGT+CGG | 0.619641 | 4.1:+11456807 | None:intergenic |
| GCACAATGCACAACAAACAT+TGG | 0.623040 | 4.1:+11460406 | None:intergenic |
| ATCTCAGAGCCAAACAGTGG+TGG | 0.625723 | 4.1:-11456641 | MS.gene47927:CDS |
| AGCATGTTGCTTTACCCTAG+AGG | 0.627744 | 4.1:-11460434 | MS.gene47927:CDS |
| CCCAAGTCGGTTGTCCCGTG+AGG | 0.632502 | 4.1:+11456820 | None:intergenic |
| CAAACAGCACATTTGACTGA+AGG | 0.639168 | 4.1:+11458019 | None:intergenic |
| ATGTCTCAACTATATTGTGG+AGG | 0.644670 | 4.1:-11460196 | MS.gene47927:CDS |
| CAAGTAGCCCATGTCCCTTG+CGG | 0.646539 | 4.1:-11458079 | MS.gene47927:CDS |
| CATGTTGCTTTACCCTAGAG+GGG | 0.647362 | 4.1:-11460432 | MS.gene47927:CDS |
| CTTACCAGGTGGAGGAACAG+AGG | 0.665101 | 4.1:+11460373 | None:intergenic |
| TTCCTGGTCATAGACCTCAC+GGG | 0.671842 | 4.1:-11456834 | MS.gene47927:CDS |
| CCAATCTCAGAGCCAAACAG+TGG | 0.689166 | 4.1:-11456644 | MS.gene47927:CDS |
| ACATTGTTAATGTACACACG+CGG | 0.795848 | 4.1:-11460166 | MS.gene47927:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAGAAAAAATAATACTT+TGG | - | chr4.1:11459843-11459862 | MS.gene47927:intron | 10.0% |
| !!! | TAAAATTTAAAATGTTATAC+GGG | - | chr4.1:11457591-11457610 | MS.gene47927:intron | 10.0% |
| !!! | TTCAACAAGATTTTTTTTTT+AGG | + | chr4.1:11458267-11458286 | None:intergenic | 15.0% |
| !!! | TTTTTTTCTAGTTTTGTTTT+TGG | - | chr4.1:11460147-11460166 | MS.gene47927:CDS | 15.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | - | chr4.1:11459809-11459828 | MS.gene47927:intron | 20.0% |
| !! | AACATGTAGTTGTTTATAAA+TGG | + | chr4.1:11458424-11458443 | None:intergenic | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | + | chr4.1:11459810-11459829 | None:intergenic | 20.0% |
| !! | AGTGTTTCATTATTTAATCT+TGG | - | chr4.1:11458579-11458598 | MS.gene47927:intron | 20.0% |
| !! | GAAATTGAAGATTATTACAA+TGG | + | chr4.1:11457416-11457435 | None:intergenic | 20.0% |
| !! | GTAACATAGTATTAATTGAA+GGG | - | chr4.1:11459873-11459892 | MS.gene47927:intron | 20.0% |
| !! | TGTAAAATGGAATTCTTTAT+TGG | + | chr4.1:11458734-11458753 | None:intergenic | 20.0% |
| !! | TGTAACATAGTATTAATTGA+AGG | - | chr4.1:11459872-11459891 | MS.gene47927:intron | 20.0% |
| !!! | AGACTTGTTTAAAATGAATT+TGG | - | chr4.1:11460415-11460434 | MS.gene47927:CDS | 20.0% |
| !!! | ATATTTGCATAATCATTTTC+TGG | - | chr4.1:11458487-11458506 | MS.gene47927:intron | 20.0% |
| !!! | CATTTTGAAACAGATTTTTT+TGG | - | chr4.1:11459947-11459966 | MS.gene47927:intron | 20.0% |
| !!! | CTAAAACAGTTATGTTATTT+AGG | - | chr4.1:11457356-11457375 | MS.gene47927:intron | 20.0% |
| !!! | TAGCTAATGTTTTGTAAATT+TGG | - | chr4.1:11458015-11458034 | MS.gene47927:CDS | 20.0% |
| !!! | TATTTGCATAATCATTTTCT+GGG | - | chr4.1:11458488-11458507 | MS.gene47927:intron | 20.0% |
| !!! | TCACACATAGATTATTTTTT+TGG | - | chr4.1:11459384-11459403 | MS.gene47927:intron | 20.0% |
| !!! | TTTAATCTGCGTTTTTAAAT+AGG | - | chr4.1:11459354-11459373 | MS.gene47927:intron | 20.0% |
| !!! | TTTTTTTTAGGAAGAATTGA+TGG | + | chr4.1:11458255-11458274 | None:intergenic | 20.0% |
| ! | AAAAGCAAATATACATTACC+TGG | + | chr4.1:11456816-11456835 | None:intergenic | 25.0% |
| ! | AAACAAACCAATAGTTGATT+AGG | + | chr4.1:11459819-11459838 | None:intergenic | 25.0% |
| ! | AAACAACTACATGTTAATCT+GGG | - | chr4.1:11458429-11458448 | MS.gene47927:intron | 25.0% |
| ! | AACATTGAACACATCTTAAA+GGG | - | chr4.1:11459610-11459629 | MS.gene47927:intron | 25.0% |
| ! | AATTTGGAGACAAAATTTCT+TGG | - | chr4.1:11458031-11458050 | MS.gene47927:CDS | 25.0% |
| ! | ATTATTACAATGGAACACTA+GGG | + | chr4.1:11457406-11457425 | None:intergenic | 25.0% |
| ! | CAATAAAAATAATGACAACC+TGG | - | chr4.1:11458064-11458083 | MS.gene47927:CDS | 25.0% |
| ! | CCAACTTAAAAGAATAAGAT+TGG | - | chr4.1:11459530-11459549 | MS.gene47927:intron | 25.0% |
| ! | CTTGAAATCTGATTAGAAAA+AGG | - | chr4.1:11459101-11459120 | MS.gene47927:intron | 25.0% |
| ! | GAATAAATCACACTGTAAAA+TGG | + | chr4.1:11458747-11458766 | None:intergenic | 25.0% |
| ! | GAGATTTATTTACGCTAAAA+AGG | - | chr4.1:11457648-11457667 | MS.gene47927:intron | 25.0% |
| ! | GAGATTTGAAGAGTAATAAA+AGG | + | chr4.1:11458632-11458651 | None:intergenic | 25.0% |
| ! | TAAACAACTACATGTTAATC+TGG | - | chr4.1:11458428-11458447 | MS.gene47927:intron | 25.0% |
| ! | TAGTCTTTAATTCTTGTATG+TGG | + | chr4.1:11459044-11459063 | None:intergenic | 25.0% |
| ! | TGAGAACATTAGAGTTATAA+TGG | - | chr4.1:11457701-11457720 | MS.gene47927:intron | 25.0% |
| ! | TTATTTACGCTAAAAAGGAT+GGG | - | chr4.1:11457653-11457672 | MS.gene47927:intron | 25.0% |
| ! | TTGAACAAAGCAAGAAAATA+AGG | + | chr4.1:11457557-11457576 | None:intergenic | 25.0% |
| ! | TTGCTAAATAAGATTGCTAA+TGG | - | chr4.1:11457445-11457464 | MS.gene47927:intron | 25.0% |
| ! | TTTATTTACGCTAAAAAGGA+TGG | - | chr4.1:11457652-11457671 | MS.gene47927:intron | 25.0% |
| !! | AGTCACTGAATAATTTCTTT+TGG | - | chr4.1:11457481-11457500 | MS.gene47927:intron | 25.0% |
| !! | CTACAGAATTTTGTTAATCT+GGG | - | chr4.1:11458948-11458967 | MS.gene47927:intron | 25.0% |
| !! | TCTACAGAATTTTGTTAATC+TGG | - | chr4.1:11458947-11458966 | MS.gene47927:intron | 25.0% |
| !!! | CCAATCTTATTCTTTTAAGT+TGG | + | chr4.1:11459533-11459552 | None:intergenic | 25.0% |
| !!! | TGTATGTTTTGAACTGTATT+TGG | - | chr4.1:11457067-11457086 | MS.gene47927:intron | 25.0% |
| !!! | TTCAAAATGAATGTCACTTT+CGG | + | chr4.1:11459936-11459955 | None:intergenic | 25.0% |
| AAATAATGAAACACTGACCT+TGG | + | chr4.1:11458574-11458593 | None:intergenic | 30.0% | |
| AAGAATAAGATTGGAGTCTA+AGG | - | chr4.1:11459539-11459558 | MS.gene47927:intron | 30.0% | |
| AAGTAGCTACAGAATTAGTT+AGG | + | chr4.1:11459277-11459296 | None:intergenic | 30.0% | |
| AAGTGAAGAATCAACACATT+CGG | + | chr4.1:11458294-11458313 | None:intergenic | 30.0% | |
| AATCAAAGAAGACTGAATCA+GGG | + | chr4.1:11457518-11457537 | None:intergenic | 30.0% | |
| CAACATTGAACACATCTTAA+AGG | - | chr4.1:11459609-11459628 | MS.gene47927:intron | 30.0% | |
| CAAGCTTATCAAGAATAAGT+AGG | + | chr4.1:11459469-11459488 | None:intergenic | 30.0% | |
| CAGTATGAAAAAATCAACTC+AGG | + | chr4.1:11460017-11460036 | None:intergenic | 30.0% | |
| GATATGTCTCAACTATATTG+TGG | - | chr4.1:11456711-11456730 | MS.gene47927:intron | 30.0% | |
| GATGTACGAACATTACATAT+AGG | + | chr4.1:11456602-11456621 | None:intergenic | 30.0% | |
| GATTATTACAATGGAACACT+AGG | + | chr4.1:11457407-11457426 | None:intergenic | 30.0% | |
| GTGGTTTAGTATTAGTTAAG+CGG | - | chr4.1:11456863-11456882 | MS.gene47927:intron | 30.0% | |
| TAAAGACTAGTATGAGAGAA+AGG | - | chr4.1:11459055-11459074 | MS.gene47927:intron | 30.0% | |
| TCTTCAAATCTCTATTGTAG+AGG | - | chr4.1:11458640-11458659 | MS.gene47927:intron | 30.0% | |
| TGGTGATTAATAGCATAGAA+AGG | - | chr4.1:11460167-11460186 | MS.gene47927:CDS | 30.0% | |
| TGGTTATAGTAGTAAAGGAA+GGG | + | chr4.1:11459254-11459273 | None:intergenic | 30.0% | |
| TGGTTTAGTATTAGTTAAGC+GGG | - | chr4.1:11456864-11456883 | MS.gene47927:intron | 30.0% | |
| TGGTTTATTTATGTTGGTCA+CGG | - | chr4.1:11457333-11457352 | MS.gene47927:intron | 30.0% | |
| TGTGAGTGGTTTATTTATGT+TGG | - | chr4.1:11457327-11457346 | MS.gene47927:intron | 30.0% | |
| TTAGAGTTATAATGGCTAAG+TGG | - | chr4.1:11457709-11457728 | MS.gene47927:intron | 30.0% | |
| TTAGGTGGTTATAGTAGTAA+AGG | + | chr4.1:11459259-11459278 | None:intergenic | 30.0% | |
| TTAGGTGTTCTTACTTGTAA+TGG | - | chr4.1:11457374-11457393 | MS.gene47927:intron | 30.0% | |
| TTATAATGGCTAAGTGGTTA+TGG | - | chr4.1:11457715-11457734 | MS.gene47927:intron | 30.0% | |
| TTGAACTGTATTTGGATAAG+AGG | - | chr4.1:11457075-11457094 | MS.gene47927:intron | 30.0% | |
| ! | AAAATGCTTTTCCAAAAAGG+TGG | - | chr4.1:11457859-11457878 | MS.gene47927:intron | 30.0% |
| ! | ATGATGTTCTTTTGTATGCA+TGG | - | chr4.1:11457175-11457194 | MS.gene47927:intron | 30.0% |
| ! | CATTTTAAGCTTTGCAGAAA+AGG | + | chr4.1:11457755-11457774 | None:intergenic | 30.0% |
| ! | GCTAAAATGCTTTTCCAAAA+AGG | - | chr4.1:11457856-11457875 | MS.gene47927:intron | 30.0% |
| ! | TACATGTTAATCTGGGATTA+AGG | - | chr4.1:11458436-11458455 | MS.gene47927:intron | 30.0% |
| ! | TCTGCGTTTTTAAATAGGAA+AGG | - | chr4.1:11459359-11459378 | MS.gene47927:intron | 30.0% |
| !! | GATTCAGTTAATTTGTAGGA+AGG | + | chr4.1:11459231-11459250 | None:intergenic | 30.0% |
| !! | TGAGACTCTAAGTTGATATT+AGG | - | chr4.1:11456656-11456675 | MS.gene47927:intron | 30.0% |
| !! | TTACTTTGATTCCACTTTTG+AGG | - | chr4.1:11457230-11457249 | MS.gene47927:intron | 30.0% |
| !! | TTTTTAGGAAGAATTGATGG+AGG | + | chr4.1:11458252-11458271 | None:intergenic | 30.0% |
| AAACATACCGTTGAAGTAGA+AGG | + | chr4.1:11460123-11460142 | None:intergenic | 35.0% | |
| AACGTTACCTTCTACTTCAA+CGG | - | chr4.1:11460113-11460132 | MS.gene47927:intron | 35.0% | |
| AACTTGTGTGTAATGGTTGT+AGG | - | chr4.1:11456453-11456472 | MS.gene47927:CDS | 35.0% | |
| AATAGAATCAGTTCCTTGAG+TGG | + | chr4.1:11458215-11458234 | None:intergenic | 35.0% | |
| AATATACATTACCTGGAGCA+AGG | + | chr4.1:11456809-11456828 | None:intergenic | 35.0% | |
| ACAACACTCATGTATCCTTA+TGG | - | chr4.1:11458864-11458883 | MS.gene47927:intron | 35.0% | |
| ACATGCCTGTTATCAGATAT+TGG | - | chr4.1:11459504-11459523 | MS.gene47927:intron | 35.0% | |
| ACATTGTTAATGTACACACG+CGG | - | chr4.1:11456744-11456763 | MS.gene47927:intron | 35.0% | |
| ATAACAGGCATGTGATAACT+TGG | + | chr4.1:11459497-11459516 | None:intergenic | 35.0% | |
| ATAGTACTCATCAAGACGAA+CGG | + | chr4.1:11458608-11458627 | None:intergenic | 35.0% | |
| ATGAAATTTCATTCCCGTTG+AGG | - | chr4.1:11459658-11459677 | MS.gene47927:intron | 35.0% | |
| ATGTCTCAACTATATTGTGG+AGG | - | chr4.1:11456714-11456733 | MS.gene47927:intron | 35.0% | |
| ATTGCACACAGATTAAGGAA+TGG | - | chr4.1:11459753-11459772 | MS.gene47927:intron | 35.0% | |
| ATTGGACATCTACAAAAGAC+AGG | + | chr4.1:11460043-11460062 | None:intergenic | 35.0% | |
| CACAACATCAACTTGATCAT+TGG | + | chr4.1:11457304-11457323 | None:intergenic | 35.0% | |
| CAGCACCTCAGTTATAAAAA+AGG | + | chr4.1:11459160-11459179 | None:intergenic | 35.0% | |
| CATCATAATCTACAAACTGC+AGG | + | chr4.1:11457161-11457180 | None:intergenic | 35.0% | |
| CATGCCTGTTATCAGATATT+GGG | - | chr4.1:11459505-11459524 | MS.gene47927:intron | 35.0% | |
| CATTGCTTGATCATGGAATA+TGG | - | chr4.1:11456953-11456972 | MS.gene47927:intron | 35.0% | |
| GAATCAAAGAAGACTGAATC+AGG | + | chr4.1:11457519-11457538 | None:intergenic | 35.0% | |
| GATTAGAAAAAGGATCCCAA+GGG | - | chr4.1:11459111-11459130 | MS.gene47927:intron | 35.0% | |
| GGAGATACATTTAAGTCTTC+TGG | - | chr4.1:11459405-11459424 | MS.gene47927:intron | 35.0% | |
| GGTTATAGTAGTAAAGGAAG+GGG | + | chr4.1:11459253-11459272 | None:intergenic | 35.0% | |
| GTGGTTATAGTAGTAAAGGA+AGG | + | chr4.1:11459255-11459274 | None:intergenic | 35.0% | |
| TAAGCTTTGCAGAAAAGGTT+AGG | + | chr4.1:11457750-11457769 | None:intergenic | 35.0% | |
| TACAACAGACAAAAGCTCAA+AGG | + | chr4.1:11459684-11459703 | None:intergenic | 35.0% | |
| TAGCATAGAAAGGATGATGT+TGG | - | chr4.1:11460177-11460196 | MS.gene47927:CDS | 35.0% | |
| TAGCTACAGAATTAGTTAGG+TGG | + | chr4.1:11459274-11459293 | None:intergenic | 35.0% | |
| TATTGCTTGCATTTAGTCCA+AGG | - | chr4.1:11458554-11458573 | MS.gene47927:intron | 35.0% | |
| TGATTAGAAAAAGGATCCCA+AGG | - | chr4.1:11459110-11459129 | MS.gene47927:intron | 35.0% | |
| TGTATTTGGATAAGAGGCAA+TGG | - | chr4.1:11457081-11457100 | MS.gene47927:intron | 35.0% | |
| TGTGAAAGGTGAATGTATGT+TGG | - | chr4.1:11457900-11457919 | MS.gene47927:intron | 35.0% | |
| TTCCTTAATCTGTGTGCAAT+TGG | + | chr4.1:11459753-11459772 | None:intergenic | 35.0% | |
| TTTAATAACGAGAACAGCGT+TGG | + | chr4.1:11456565-11456584 | None:intergenic | 35.0% | |
| TTTAGTATTAGTTAAGCGGG+TGG | - | chr4.1:11456867-11456886 | MS.gene47927:intron | 35.0% | |
| TTTATGAGCCTTGGTAAACA+CGG | - | chr4.1:11457267-11457286 | MS.gene47927:intron | 35.0% | |
| ! | GAGCTTTTGTCTGTTGTAAA+TGG | - | chr4.1:11459686-11459705 | MS.gene47927:intron | 35.0% |
| ! | TAGTGAAAGGTTTGGTTGTT+TGG | - | chr4.1:11457112-11457131 | MS.gene47927:intron | 35.0% |
| ! | TCTTTCTGAACTGTTAGCTT+TGG | + | chr4.1:11459192-11459211 | None:intergenic | 35.0% |
| ! | TGTCTTTTGTAGATGTCCAA+TGG | - | chr4.1:11460042-11460061 | MS.gene47927:intron | 35.0% |
| ! | TTTTGTAGATGTCCAATGGA+AGG | - | chr4.1:11460046-11460065 | MS.gene47927:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4.1:11459973-11459992 | MS.gene47927:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+TGG | + | chr4.1:11459992-11459973 | None:intergenic | 35.0% |
| !! | AGGGGATTCAGTTAATTTGT+AGG | + | chr4.1:11459235-11459254 | None:intergenic | 35.0% |
| !! | CAATGTCTGTTGATTCAAGT+GGG | - | chr4.1:11460301-11460320 | MS.gene47927:intron | 35.0% |
| !! | CATCTCTTTGAAATGAAGTC+TGG | - | chr4.1:11458326-11458345 | MS.gene47927:intron | 35.0% |
| !! | CTTTCTGAACTGTTAGCTTT+GGG | + | chr4.1:11459191-11459210 | None:intergenic | 35.0% |
| !! | TCAGTTAATTTGTAGGAAGG+CGG | + | chr4.1:11459228-11459247 | None:intergenic | 35.0% |
| !! | TGTTGATTCAAGTGGGAAAT+TGG | - | chr4.1:11460308-11460327 | MS.gene47927:intron | 35.0% |
| !! | TTTCTGAACTGTTAGCTTTG+GGG | + | chr4.1:11459190-11459209 | None:intergenic | 35.0% |
| !!! | GACACTCATTTTGAAATGGA+GGG | + | chr4.1:11459723-11459742 | None:intergenic | 35.0% |
| AAAATCCCGTCTTATGTTCC+CGG | - | chr4.1:11458093-11458112 | MS.gene47927:intron | 40.0% | |
| AACTATATTGTGGAGGCTGT+AGG | - | chr4.1:11456721-11456740 | MS.gene47927:intron | 40.0% | |
| ACGACAAATGACCTCAAAAG+TGG | + | chr4.1:11457244-11457263 | None:intergenic | 40.0% | |
| AGCCAATTGCACACAGATTA+AGG | - | chr4.1:11459748-11459767 | MS.gene47927:intron | 40.0% | |
| ATTTACTGCACGATTGGTGT+TGG | - | chr4.1:11457780-11457799 | MS.gene47927:intron | 40.0% | |
| CAAACAGCACATTTGACTGA+AGG | + | chr4.1:11458894-11458913 | None:intergenic | 40.0% | |
| CAGAGTCAACTTGTGTGTAA+TGG | - | chr4.1:11456446-11456465 | MS.gene47927:CDS | 40.0% | |
| CAGTTCAAAACATACACTCG+AGG | + | chr4.1:11457063-11457082 | None:intergenic | 40.0% | |
| CATTCACCTTTCACAAGCAT+AGG | + | chr4.1:11457895-11457914 | None:intergenic | 40.0% | |
| CATTTCAAAGAGATGACGTG+AGG | + | chr4.1:11458321-11458340 | None:intergenic | 40.0% | |
| CCAATAACTGGAATGAGGTT+GGG | - | chr4.1:11457829-11457848 | MS.gene47927:intron | 40.0% | |
| CCACTTGAATCAACAGACAT+TGG | + | chr4.1:11460303-11460322 | None:intergenic | 40.0% | |
| GAAGCTATTTACTGCACGAT+TGG | - | chr4.1:11457774-11457793 | MS.gene47927:intron | 40.0% | |
| GAGAATCCAAAGTTTCCCTA+GGG | + | chr4.1:11459586-11459605 | None:intergenic | 40.0% | |
| GCACAATGCACAACAAACAT+TGG | + | chr4.1:11456507-11456526 | None:intergenic | 40.0% | |
| GGATCCCAATATCTGATAAC+AGG | + | chr4.1:11459512-11459531 | None:intergenic | 40.0% | |
| TAATCCGTACACGAGGATTT+CGG | + | chr4.1:11456997-11457016 | None:intergenic | 40.0% | |
| TATATGCCCTAGGGAAACTT+TGG | - | chr4.1:11459577-11459596 | MS.gene47927:intron | 40.0% | |
| TCCAATAACTGGAATGAGGT+TGG | - | chr4.1:11457828-11457847 | MS.gene47927:intron | 40.0% | |
| TGAGAATCCAAAGTTTCCCT+AGG | + | chr4.1:11459587-11459606 | None:intergenic | 40.0% | |
| TTGGATAAGAGGCAATGGAA+GGG | - | chr4.1:11457086-11457105 | MS.gene47927:intron | 40.0% | |
| TTTCCCTAGGGCATATAAGT+CGG | + | chr4.1:11459574-11459593 | None:intergenic | 40.0% | |
| TTTGCACACTACGAGATGTT+TGG | - | chr4.1:11458684-11458703 | MS.gene47927:intron | 40.0% | |
| TTTGCTGCATTGCTTGATCA+TGG | - | chr4.1:11456946-11456965 | MS.gene47927:intron | 40.0% | |
| TTTGGATAAGAGGCAATGGA+AGG | - | chr4.1:11457085-11457104 | MS.gene47927:intron | 40.0% | |
| ! | AAGGATACATGAGTGTTGTC+CGG | + | chr4.1:11458863-11458882 | None:intergenic | 40.0% |
| ! | AGACGGGATTTTATAGTACC+AGG | + | chr4.1:11458085-11458104 | None:intergenic | 40.0% |
| ! | ATACGGGATTCCTTTTGCAT+GGG | - | chr4.1:11457607-11457626 | MS.gene47927:intron | 40.0% |
| ! | GATTTTCTACCACCACTGTT+TGG | + | chr4.1:11460281-11460300 | None:intergenic | 40.0% |
| ! | TATACGGGATTCCTTTTGCA+TGG | - | chr4.1:11457606-11457625 | MS.gene47927:intron | 40.0% |
| ! | TCTTATTTAGCAACAGCGTC+TGG | + | chr4.1:11457438-11457457 | None:intergenic | 40.0% |
| ! | TTGATGTTGTGACTTGTGAG+TGG | - | chr4.1:11457313-11457332 | MS.gene47927:intron | 40.0% |
| ! | TTTACTGCACGATTGGTGTT+GGG | - | chr4.1:11457781-11457800 | MS.gene47927:intron | 40.0% |
| !! | CCAATGTCTGTTGATTCAAG+TGG | - | chr4.1:11460300-11460319 | MS.gene47927:intron | 40.0% |
| !! | TGTCGTGTTTTTATGAGCCT+TGG | - | chr4.1:11457258-11457277 | MS.gene47927:intron | 40.0% |
| !! | TTAATTTGTAGGAAGGCGGA+AGG | + | chr4.1:11459224-11459243 | None:intergenic | 40.0% |
| !!! | CGACACTCATTTTGAAATGG+AGG | + | chr4.1:11459724-11459743 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr4.1:11459977-11459996 | MS.gene47927:intron | 40.0% |
| !!! | GGCAGCCTTTTTTATAACTG+AGG | - | chr4.1:11459152-11459171 | MS.gene47927:intron | 40.0% |
| AAAAGCTCAAAGGCCTCAAC+GGG | + | chr4.1:11459674-11459693 | None:intergenic | 45.0% | |
| AAAAGGCTGCCCTTTGTTGA+AGG | + | chr4.1:11459143-11459162 | None:intergenic | 45.0% | |
| AAACCCGACTTATATGCCCT+AGG | - | chr4.1:11459567-11459586 | MS.gene47927:intron | 45.0% | |
| AAAGGATGGGTGCTTAGTCT+TGG | - | chr4.1:11457666-11457685 | MS.gene47927:intron | 45.0% | |
| AAAGGCTGCCCTTTGTTGAA+GGG | + | chr4.1:11459142-11459161 | None:intergenic | 45.0% | |
| AAATCCCGTCTTATGTTCCC+GGG | - | chr4.1:11458094-11458113 | MS.gene47927:intron | 45.0% | |
| AACCCGACTTATATGCCCTA+GGG | - | chr4.1:11459568-11459587 | MS.gene47927:intron | 45.0% | |
| AATCAGTTCCTTGAGTGGTG+TGG | + | chr4.1:11458210-11458229 | None:intergenic | 45.0% | |
| AATGACCTTAATGTACCCCC+TGG | + | chr4.1:11457020-11457039 | None:intergenic | 45.0% | |
| AATGGAAGGCTTCCAATTCC+TGG | - | chr4.1:11460060-11460079 | MS.gene47927:intron | 45.0% | |
| ACAATGGAACACTAGGGAAG+AGG | + | chr4.1:11457400-11457419 | None:intergenic | 45.0% | |
| AGAAGGTAACGTTCCCAAGT+CGG | + | chr4.1:11460106-11460125 | None:intergenic | 45.0% | |
| AGAGAAGCAGTCAAATGCAG+TGG | + | chr4.1:11460375-11460394 | None:intergenic | 45.0% | |
| AGGAATTGGAAGCCTTCCAT+TGG | + | chr4.1:11460061-11460080 | None:intergenic | 45.0% | |
| ATCAGATTCCACACCACTCA+AGG | - | chr4.1:11458199-11458218 | MS.gene47927:intron | 45.0% | |
| ATTCCAGTTATTGGAGCCAG+TGG | + | chr4.1:11457823-11457842 | None:intergenic | 45.0% | |
| ATTCCTGGTCATAGACCTCA+CGG | - | chr4.1:11460075-11460094 | MS.gene47927:intron | 45.0% | |
| CAAAAGCTCAAAGGCCTCAA+CGG | + | chr4.1:11459675-11459694 | None:intergenic | 45.0% | |
| CAGGTGAGCAATGTTGTTGT+TGG | - | chr4.1:11460445-11460464 | MS.gene47927:CDS | 45.0% | |
| CATACTGTAAACCTTGCTCC+AGG | - | chr4.1:11456795-11456814 | MS.gene47927:intron | 45.0% | |
| CCCAACCTCATTCCAGTTAT+TGG | + | chr4.1:11457832-11457851 | None:intergenic | 45.0% | |
| GCTTGACAGATGAAGCTTAG+TGG | - | chr4.1:11456844-11456863 | MS.gene47927:CDS | 45.0% | |
| GGTGAATGTATGTTGGAGAG+TGG | - | chr4.1:11457907-11457926 | MS.gene47927:intron | 45.0% | |
| TAGTTAAGCGGGTGGCATAT+TGG | - | chr4.1:11456875-11456894 | MS.gene47927:intron | 45.0% | |
| TGAGGTCTATGACCAGGAAT+TGG | + | chr4.1:11460075-11460094 | None:intergenic | 45.0% | |
| TGGATAAGAGGCAATGGAAG+GGG | - | chr4.1:11457087-11457106 | MS.gene47927:intron | 45.0% | |
| TGGCTCCAATAACTGGAATG+AGG | - | chr4.1:11457824-11457843 | MS.gene47927:intron | 45.0% | |
| TGTTGAAGGGGAAAACCCTT+GGG | + | chr4.1:11459129-11459148 | None:intergenic | 45.0% | |
| TTCCAGTTATTGGAGCCAGT+GGG | + | chr4.1:11457822-11457841 | None:intergenic | 45.0% | |
| TTCCCTAGGGCATATAAGTC+GGG | + | chr4.1:11459573-11459592 | None:intergenic | 45.0% | |
| TTGACTGAAGGAGCTCCATA+AGG | + | chr4.1:11458882-11458901 | None:intergenic | 45.0% | |
| TTGTTGAAGGGGAAAACCCT+TGG | + | chr4.1:11459130-11459149 | None:intergenic | 45.0% | |
| ! | AAACATTGGTTGCCCCTCTA+GGG | + | chr4.1:11456493-11456512 | None:intergenic | 45.0% |
| ! | AAGGGGGTTAGTGAAAGGTT+TGG | - | chr4.1:11457104-11457123 | MS.gene47927:intron | 45.0% |
| ! | AATGGAAGGGGGTTAGTGAA+AGG | - | chr4.1:11457099-11457118 | MS.gene47927:intron | 45.0% |
| ! | AGGGTTTTCCCCTTCAACAA+AGG | - | chr4.1:11459130-11459149 | MS.gene47927:intron | 45.0% |
| ! | GATTACCAGGGGGTACATTA+AGG | - | chr4.1:11457012-11457031 | MS.gene47927:intron | 45.0% |
| ! | GGGTTTTCCCCTTCAACAAA+GGG | - | chr4.1:11459131-11459150 | MS.gene47927:intron | 45.0% |
| ! | TACGGGATTCCTTTTGCATG+GGG | - | chr4.1:11457608-11457627 | MS.gene47927:intron | 45.0% |
| !! | ACTGTTTGGCTCTGAGATTG+GGG | + | chr4.1:11460267-11460286 | None:intergenic | 45.0% |
| !! | AGCATGTTGCTTTACCCTAG+AGG | - | chr4.1:11456476-11456495 | MS.gene47927:intron | 45.0% |
| !! | CACTGTTTGGCTCTGAGATT+GGG | + | chr4.1:11460268-11460287 | None:intergenic | 45.0% |
| !! | CATGTTGCTTTACCCTAGAG+GGG | - | chr4.1:11456478-11456497 | MS.gene47927:intron | 45.0% |
| !! | GCATGTTGCTTTACCCTAGA+GGG | - | chr4.1:11456477-11456496 | MS.gene47927:intron | 45.0% |
| !! | GGTGCTTAGTCTTGGTAAGT+TGG | - | chr4.1:11457674-11457693 | MS.gene47927:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4.1:11459976-11459995 | MS.gene47927:intron | 45.0% |
| !!! | ATAAAATTTAAAATGTTATA+CGG | - | chr4.1:11457590-11457609 | MS.gene47927:intron | 5.0% |
| AAATTTGTCCGCCTCTTCCC+GGG | + | chr4.1:11458114-11458133 | None:intergenic | 50.0% | |
| AAGGCTGCCCTTTGTTGAAG+GGG | + | chr4.1:11459141-11459160 | None:intergenic | 50.0% | |
| ATCTCAGAGCCAAACAGTGG+TGG | - | chr4.1:11460269-11460288 | MS.gene47927:intron | 50.0% | |
| ATGGGGGTCATTTGGCTACT+CGG | - | chr4.1:11457625-11457644 | MS.gene47927:intron | 50.0% | |
| ATTACCTCTGTTCCTCCACC+TGG | - | chr4.1:11456533-11456552 | MS.gene47927:intron | 50.0% | |
| ATTTGTAGGAAGGCGGAAGG+AGG | + | chr4.1:11459221-11459240 | None:intergenic | 50.0% | |
| CAAATTTGTCCGCCTCTTCC+CGG | + | chr4.1:11458115-11458134 | None:intergenic | 50.0% | |
| CAGCCAAACCGTGTTTACCA+AGG | + | chr4.1:11457278-11457297 | None:intergenic | 50.0% | |
| CCAAATGACCCCCATGCAAA+AGG | + | chr4.1:11457620-11457639 | None:intergenic | 50.0% | |
| CCAATCTCAGAGCCAAACAG+TGG | - | chr4.1:11460266-11460285 | MS.gene47927:intron | 50.0% | |
| CCTTTCACAAGCATAGGAGC+CGG | + | chr4.1:11457889-11457908 | None:intergenic | 50.0% | |
| CGTTCCGAAATCCTCGTGTA+CGG | - | chr4.1:11456990-11457009 | MS.gene47927:intron | 50.0% | |
| CTCTTCCCGGGAACATAAGA+CGG | + | chr4.1:11458102-11458121 | None:intergenic | 50.0% | |
| CTTTCACAAGCATAGGAGCC+GGG | + | chr4.1:11457888-11457907 | None:intergenic | 50.0% | |
| GAGCCTTGGTAAACACGGTT+TGG | - | chr4.1:11457272-11457291 | MS.gene47927:intron | 50.0% | |
| GGATAAGAGGCAATGGAAGG+GGG | - | chr4.1:11457088-11457107 | MS.gene47927:intron | 50.0% | |
| GGCATATAAGTCGGGTTTGC+AGG | + | chr4.1:11459565-11459584 | None:intergenic | 50.0% | |
| TACTGATGTTCCTGCAGGGA+TGG | - | chr4.1:11456689-11456708 | MS.gene47927:intron | 50.0% | |
| TAGGACGACGTAGACACGAA+TGG | + | chr4.1:11459450-11459469 | None:intergenic | 50.0% | |
| TCCCTGCAGGAACATCAGTA+CGG | + | chr4.1:11456689-11456708 | None:intergenic | 50.0% | |
| TCTTCCCGGGAACATAAGAC+GGG | + | chr4.1:11458101-11458120 | None:intergenic | 50.0% | |
| TGAGACATATCCATCCCTGC+AGG | + | chr4.1:11456702-11456721 | None:intergenic | 50.0% | |
| TTCCTGGTCATAGACCTCAC+GGG | - | chr4.1:11460076-11460095 | MS.gene47927:intron | 50.0% | |
| TTTCCAAAAAGGTGGCAGCC+CGG | - | chr4.1:11457867-11457886 | MS.gene47927:intron | 50.0% | |
| TTTGTAGGAAGGCGGAAGGA+GGG | + | chr4.1:11459220-11459239 | None:intergenic | 50.0% | |
| ! | ACCGTACTGATGTTCCTGCA+GGG | - | chr4.1:11456685-11456704 | MS.gene47927:intron | 50.0% |
| ! | ACGGGATTCCTTTTGCATGG+GGG | - | chr4.1:11457609-11457628 | MS.gene47927:intron | 50.0% |
| ! | ATCCTCGTGTACGGATTACC+AGG | - | chr4.1:11456999-11457018 | MS.gene47927:intron | 50.0% |
| ! | CAAACATTGGTTGCCCCTCT+AGG | + | chr4.1:11456494-11456513 | None:intergenic | 50.0% |
| ! | CCTTTTGCATGGGGGTCATT+TGG | - | chr4.1:11457617-11457636 | MS.gene47927:intron | 50.0% |
| ! | TACCGTACTGATGTTCCTGC+AGG | - | chr4.1:11456684-11456703 | MS.gene47927:intron | 50.0% |
| ! | TCCTCGTGTACGGATTACCA+GGG | - | chr4.1:11457000-11457019 | MS.gene47927:intron | 50.0% |
| !! | AACCCACTGGCTCCAATAAC+TGG | - | chr4.1:11457817-11457836 | MS.gene47927:intron | 50.0% |
| !! | CCACTGTTTGGCTCTGAGAT+TGG | + | chr4.1:11460269-11460288 | None:intergenic | 50.0% |
| !! | GAGATTGGGGCATTGACTGT+AGG | + | chr4.1:11460254-11460273 | None:intergenic | 50.0% |
| AAGTAGCCCATGTCCCTTGC+GGG | - | chr4.1:11458832-11458851 | MS.gene47927:intron | 55.0% | |
| CAAGTAGCCCATGTCCCTTG+CGG | - | chr4.1:11458831-11458850 | MS.gene47927:intron | 55.0% | |
| CCGGCTCCTATGCTTGTGAA+AGG | - | chr4.1:11457886-11457905 | MS.gene47927:intron | 55.0% | |
| CGTCTTATGTTCCCGGGAAG+AGG | - | chr4.1:11458100-11458119 | MS.gene47927:intron | 55.0% | |
| CTTACCAGGTGGAGGAACAG+AGG | + | chr4.1:11456540-11456559 | None:intergenic | 55.0% | |
| CTTATGTTCCCGGGAAGAGG+CGG | - | chr4.1:11458103-11458122 | MS.gene47927:intron | 55.0% | |
| GTGAGAAACCACCATCCCGT+CGG | + | chr4.1:11457139-11457158 | None:intergenic | 55.0% | |
| GTTTGGTTGTTTGGCCCGAC+GGG | - | chr4.1:11457121-11457140 | MS.gene47927:intron | 55.0% | |
| TGAGAAACCACCATCCCGTC+GGG | + | chr4.1:11457138-11457157 | None:intergenic | 55.0% | |
| TGGGGGTCATTTGGCTACTC+GGG | - | chr4.1:11457626-11457645 | MS.gene47927:intron | 55.0% | |
| TTGTAGGAAGGCGGAAGGAG+GGG | + | chr4.1:11459219-11459238 | None:intergenic | 55.0% | |
| ! | CCTCGTGTACGGATTACCAG+GGG | - | chr4.1:11457001-11457020 | MS.gene47927:intron | 55.0% |
| ! | CTCGTGTACGGATTACCAGG+GGG | - | chr4.1:11457002-11457021 | MS.gene47927:intron | 55.0% |
| ! | GAACAGCGTTGGAGCTTACC+AGG | + | chr4.1:11456554-11456573 | None:intergenic | 55.0% |
| ! | GGTTTGGTTGTTTGGCCCGA+CGG | - | chr4.1:11457120-11457139 | MS.gene47927:intron | 55.0% |
| ACCTCACGGGACAACCGACT+TGG | - | chr4.1:11460089-11460108 | MS.gene47927:intron | 60.0% | |
| ATGTCCCTTGCGGGAACTGC+CGG | - | chr4.1:11458841-11458860 | MS.gene47927:intron | 60.0% | |
| CCCCTGGTAATCCGTACACG+AGG | + | chr4.1:11457004-11457023 | None:intergenic | 60.0% | |
| CGTTGGAGCTTACCAGGTGG+AGG | + | chr4.1:11456548-11456567 | None:intergenic | 60.0% | |
| GCAGTTCCCGCAAGGGACAT+GGG | + | chr4.1:11458841-11458860 | None:intergenic | 60.0% | |
| GTCCCGTGAGGTCTATGACC+AGG | + | chr4.1:11460081-11460100 | None:intergenic | 60.0% | |
| TGTAGGAAGGCGGAAGGAGG+GGG | + | chr4.1:11459218-11459237 | None:intergenic | 60.0% | |
| TTGTCCGGCAGTTCCCGCAA+GGG | + | chr4.1:11458848-11458867 | None:intergenic | 60.0% | |
| ! | ATTGGAGCCAGTGGGTTCGC+AGG | + | chr4.1:11457814-11457833 | None:intergenic | 60.0% |
| ! | CAGCGTTGGAGCTTACCAGG+TGG | + | chr4.1:11456551-11456570 | None:intergenic | 60.0% |
| ! | CCTCACGGGACAACCGACTT+GGG | - | chr4.1:11460090-11460109 | MS.gene47927:intron | 60.0% |
| ! | TTGGAGCCAGTGGGTTCGCA+GGG | + | chr4.1:11457813-11457832 | None:intergenic | 60.0% |
| AGCAAGCCCTGCGAACCCAC+TGG | - | chr4.1:11457804-11457823 | MS.gene47927:intron | 65.0% | |
| CCCAAGTCGGTTGTCCCGTG+AGG | + | chr4.1:11460093-11460112 | None:intergenic | 65.0% | |
| GGCAGTTCCCGCAAGGGACA+TGG | + | chr4.1:11458842-11458861 | None:intergenic | 65.0% | |
| GGTTGTTTGGCCCGACGGGA+TGG | - | chr4.1:11457125-11457144 | MS.gene47927:intron | 65.0% | |
| GTTGTCCGGCAGTTCCCGCA+AGG | + | chr4.1:11458849-11458868 | None:intergenic | 65.0% | |
| TGTTTGGCCCGACGGGATGG+TGG | - | chr4.1:11457128-11457147 | MS.gene47927:intron | 65.0% | |
| ! | GAGCCGGGCTGCCACCTTTT+TGG | + | chr4.1:11457873-11457892 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 11456443 | 11460489 | 11456443 | ID=MS.gene47927 |
| chr4.1 | mRNA | 11456443 | 11460489 | 11456443 | ID=MS.gene47927.t1;Parent=MS.gene47927 |
| chr4.1 | exon | 11460378 | 11460489 | 11460378 | ID=MS.gene47927.t1.exon1;Parent=MS.gene47927.t1 |
| chr4.1 | CDS | 11460378 | 11460489 | 11460378 | ID=cds.MS.gene47927.t1;Parent=MS.gene47927.t1 |
| chr4.1 | exon | 11460116 | 11460226 | 11460116 | ID=MS.gene47927.t1.exon2;Parent=MS.gene47927.t1 |
| chr4.1 | CDS | 11460116 | 11460226 | 11460116 | ID=cds.MS.gene47927.t1;Parent=MS.gene47927.t1 |
| chr4.1 | exon | 11457997 | 11458109 | 11457997 | ID=MS.gene47927.t1.exon3;Parent=MS.gene47927.t1 |
| chr4.1 | CDS | 11457997 | 11458109 | 11457997 | ID=cds.MS.gene47927.t1;Parent=MS.gene47927.t1 |
| chr4.1 | exon | 11456798 | 11456878 | 11456798 | ID=MS.gene47927.t1.exon4;Parent=MS.gene47927.t1 |
| chr4.1 | CDS | 11456798 | 11456878 | 11456798 | ID=cds.MS.gene47927.t1;Parent=MS.gene47927.t1 |
| chr4.1 | exon | 11456603 | 11456674 | 11456603 | ID=MS.gene47927.t1.exon5;Parent=MS.gene47927.t1 |
| chr4.1 | CDS | 11456603 | 11456674 | 11456603 | ID=cds.MS.gene47927.t1;Parent=MS.gene47927.t1 |
| chr4.1 | exon | 11456443 | 11456484 | 11456443 | ID=MS.gene47927.t1.exon6;Parent=MS.gene47927.t1 |
| chr4.1 | CDS | 11456443 | 11456484 | 11456443 | ID=cds.MS.gene47927.t1;Parent=MS.gene47927.t1 |
| Gene Sequence |
| Protein sequence |
