Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48309.t1 | XP_024632961.1 | 84.9 | 713 | 71 | 4 | 1 | 676 | 81 | 793 | 0.00E+00 | 1210.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48309.t1 | Q9SZL8 | 27.4 | 573 | 375 | 9 | 6 | 576 | 104 | 637 | 6.1e-62 | 240.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48309.t1 | D3YBB9 | 76.4 | 709 | 122 | 5 | 2 | 675 | 114 | 812 | 2.0e-310 | 1073.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene48309.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48309.t1 | MTR_0558s0020 | 88.745 | 231 | 26 | 0 | 1 | 231 | 66 | 296 | 4.70e-154 | 447 |
| MS.gene48309.t1 | MTR_6g090505 | 83.544 | 237 | 39 | 0 | 1 | 237 | 1 | 237 | 1.26e-143 | 423 |
| MS.gene48309.t1 | MTR_6g090505 | 52.284 | 197 | 28 | 4 | 332 | 526 | 230 | 362 | 1.39e-48 | 175 |
| MS.gene48309.t1 | MTR_1g083640 | 90.196 | 204 | 20 | 0 | 1 | 204 | 81 | 284 | 4.45e-137 | 404 |
| MS.gene48309.t1 | MTR_8g446020 | 79.386 | 228 | 47 | 0 | 4 | 231 | 29 | 256 | 5.01e-132 | 389 |
| MS.gene48309.t1 | MTR_2g014100 | 86.628 | 172 | 23 | 0 | 1 | 172 | 74 | 245 | 2.14e-106 | 323 |
| MS.gene48309.t1 | MTR_0337s0040 | 77.604 | 192 | 43 | 0 | 4 | 195 | 30 | 221 | 3.72e-106 | 322 |
| MS.gene48309.t1 | MTR_1g055240 | 87.324 | 142 | 18 | 0 | 27 | 168 | 3 | 144 | 6.50e-87 | 269 |
| MS.gene48309.t1 | MTR_0019s0290 | 81.579 | 152 | 28 | 0 | 18 | 169 | 9 | 160 | 3.81e-86 | 267 |
| MS.gene48309.t1 | MTR_0337s0060 | 52.215 | 316 | 26 | 5 | 383 | 670 | 21 | 239 | 1.11e-85 | 269 |
| MS.gene48309.t1 | MTR_3g008240 | 86.232 | 138 | 19 | 0 | 1 | 138 | 66 | 203 | 3.51e-81 | 256 |
| MS.gene48309.t1 | MTR_3g028680 | 80.132 | 151 | 27 | 1 | 529 | 676 | 1 | 151 | 7.14e-80 | 252 |
| MS.gene48309.t1 | MTR_4g040430 | 85.507 | 138 | 16 | 1 | 1 | 138 | 65 | 198 | 1.80e-79 | 251 |
| MS.gene48309.t1 | MTR_2g067090 | 77.703 | 148 | 30 | 1 | 532 | 676 | 99 | 246 | 2.64e-71 | 233 |
| MS.gene48309.t1 | MTR_4g133495 | 61.224 | 196 | 48 | 4 | 487 | 679 | 88 | 258 | 2.44e-67 | 222 |
| MS.gene48309.t1 | MTR_4g133340 | 61.224 | 196 | 48 | 4 | 487 | 679 | 88 | 258 | 2.44e-67 | 222 |
| MS.gene48309.t1 | MTR_5g071590 | 80.583 | 103 | 20 | 0 | 1 | 103 | 78 | 180 | 4.45e-57 | 192 |
| MS.gene48309.t1 | MTR_6g051425 | 32.967 | 273 | 155 | 5 | 21 | 277 | 64 | 324 | 8.16e-36 | 138 |
| MS.gene48309.t1 | MTR_1281s0010 | 80.952 | 63 | 12 | 0 | 1 | 63 | 47 | 109 | 3.68e-29 | 112 |
| MS.gene48309.t1 | MTR_2g067130 | 62.162 | 74 | 22 | 2 | 606 | 676 | 46 | 116 | 3.28e-18 | 82.4 |
| MS.gene48309.t1 | MTR_1g070355 | 25.357 | 280 | 193 | 4 | 21 | 298 | 119 | 384 | 6.95e-16 | 81.6 |
| MS.gene48309.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 195 | 230 | 14 | 49 | 8.71e-14 | 67.4 |
| MS.gene48309.t1 | MTR_0402s0040 | 25.333 | 150 | 97 | 3 | 20 | 169 | 71 | 205 | 4.21e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48309.t1 | AT4G38180 | 28.748 | 567 | 347 | 11 | 20 | 576 | 118 | 637 | 6.70e-72 | 249 |
| MS.gene48309.t1 | AT4G15090 | 26.783 | 575 | 383 | 10 | 59 | 629 | 121 | 661 | 4.40e-62 | 222 |
| MS.gene48309.t1 | AT4G15090 | 26.783 | 575 | 383 | 10 | 59 | 629 | 121 | 661 | 4.40e-62 | 222 |
| MS.gene48309.t1 | AT4G15090 | 26.783 | 575 | 383 | 10 | 59 | 629 | 121 | 661 | 4.40e-62 | 222 |
| MS.gene48309.t1 | AT4G15090 | 26.783 | 575 | 383 | 10 | 59 | 629 | 121 | 661 | 4.40e-62 | 222 |
| MS.gene48309.t1 | AT4G15090 | 26.783 | 575 | 383 | 10 | 59 | 629 | 121 | 661 | 4.40e-62 | 222 |
| MS.gene48309.t1 | AT2G27110 | 26.943 | 579 | 360 | 15 | 63 | 630 | 108 | 634 | 5.23e-55 | 202 |
| MS.gene48309.t1 | AT2G27110 | 26.943 | 579 | 360 | 15 | 63 | 630 | 108 | 634 | 5.23e-55 | 202 |
| MS.gene48309.t1 | AT2G27110 | 28.310 | 491 | 306 | 12 | 149 | 630 | 36 | 489 | 9.56e-55 | 199 |
| MS.gene48309.t1 | AT3G06250 | 27.991 | 443 | 280 | 9 | 135 | 572 | 295 | 703 | 3.06e-52 | 193 |
| MS.gene48309.t1 | AT3G06250 | 27.991 | 443 | 280 | 9 | 135 | 572 | 295 | 703 | 3.06e-52 | 193 |
| MS.gene48309.t1 | AT3G06250 | 27.991 | 443 | 280 | 9 | 135 | 572 | 295 | 703 | 3.06e-52 | 193 |
| MS.gene48309.t1 | AT1G76320 | 25.765 | 621 | 390 | 17 | 19 | 631 | 41 | 598 | 5.19e-51 | 188 |
| MS.gene48309.t1 | AT1G76320 | 25.243 | 618 | 395 | 15 | 19 | 630 | 41 | 597 | 1.11e-50 | 188 |
| MS.gene48309.t1 | AT1G76320 | 25.806 | 620 | 389 | 17 | 19 | 630 | 41 | 597 | 1.26e-50 | 188 |
| MS.gene48309.t1 | AT1G76320 | 25.806 | 620 | 389 | 17 | 19 | 630 | 41 | 597 | 1.26e-50 | 188 |
| MS.gene48309.t1 | AT3G22170 | 23.387 | 620 | 410 | 14 | 5 | 619 | 100 | 659 | 4.03e-47 | 179 |
| MS.gene48309.t1 | AT3G22170 | 23.387 | 620 | 410 | 14 | 5 | 619 | 100 | 659 | 4.03e-47 | 179 |
| MS.gene48309.t1 | AT5G18960 | 27.578 | 446 | 282 | 11 | 134 | 572 | 316 | 727 | 4.81e-47 | 178 |
| MS.gene48309.t1 | AT5G18960 | 27.578 | 446 | 282 | 11 | 134 | 572 | 316 | 727 | 4.81e-47 | 178 |
| MS.gene48309.t1 | AT4G38170 | 26.108 | 406 | 267 | 8 | 171 | 573 | 24 | 399 | 1.23e-45 | 171 |
| MS.gene48309.t1 | AT4G19990 | 27.743 | 483 | 314 | 10 | 155 | 632 | 106 | 558 | 2.45e-43 | 167 |
| MS.gene48309.t1 | AT4G19990 | 27.743 | 483 | 314 | 10 | 155 | 632 | 163 | 615 | 2.90e-43 | 167 |
| MS.gene48309.t1 | AT4G19990 | 27.743 | 483 | 314 | 10 | 155 | 632 | 163 | 615 | 4.36e-43 | 166 |
| MS.gene48309.t1 | AT4G19990 | 27.743 | 483 | 314 | 10 | 155 | 632 | 163 | 615 | 4.36e-43 | 166 |
| MS.gene48309.t1 | AT4G19990 | 27.743 | 483 | 314 | 10 | 155 | 632 | 163 | 615 | 4.73e-43 | 166 |
| MS.gene48309.t1 | AT4G19990 | 27.743 | 483 | 314 | 10 | 155 | 632 | 163 | 615 | 4.73e-43 | 166 |
| MS.gene48309.t1 | AT4G19990 | 27.743 | 483 | 314 | 10 | 155 | 632 | 177 | 629 | 5.33e-43 | 166 |
| MS.gene48309.t1 | AT1G10240 | 25.979 | 562 | 352 | 19 | 21 | 570 | 95 | 604 | 4.09e-40 | 157 |
| MS.gene48309.t1 | AT1G10240 | 25.979 | 562 | 352 | 19 | 21 | 570 | 95 | 604 | 4.09e-40 | 157 |
| MS.gene48309.t1 | AT5G28530 | 25.169 | 592 | 362 | 19 | 5 | 571 | 84 | 619 | 1.06e-39 | 155 |
| MS.gene48309.t1 | AT5G28530 | 25.213 | 587 | 364 | 18 | 5 | 571 | 84 | 615 | 1.31e-39 | 155 |
| MS.gene48309.t1 | AT5G28530 | 25.213 | 587 | 364 | 18 | 5 | 571 | 84 | 615 | 1.31e-39 | 155 |
| MS.gene48309.t1 | AT2G32250 | 23.664 | 655 | 395 | 15 | 5 | 654 | 68 | 622 | 5.11e-39 | 154 |
| MS.gene48309.t1 | AT2G32250 | 23.394 | 654 | 398 | 14 | 5 | 654 | 27 | 581 | 6.85e-39 | 154 |
| MS.gene48309.t1 | AT2G32250 | 23.547 | 654 | 397 | 14 | 5 | 654 | 27 | 581 | 7.86e-39 | 154 |
| MS.gene48309.t1 | AT2G32250 | 23.664 | 655 | 395 | 15 | 5 | 654 | 68 | 622 | 1.00e-38 | 154 |
| MS.gene48309.t1 | AT2G32250 | 23.664 | 655 | 395 | 15 | 5 | 654 | 68 | 622 | 1.00e-38 | 154 |
| MS.gene48309.t1 | AT2G32250 | 23.664 | 655 | 395 | 15 | 5 | 654 | 68 | 622 | 1.08e-38 | 154 |
| MS.gene48309.t1 | AT2G32250 | 23.664 | 655 | 395 | 15 | 5 | 654 | 68 | 622 | 1.08e-38 | 154 |
| MS.gene48309.t1 | AT2G32250 | 23.664 | 655 | 395 | 15 | 5 | 654 | 68 | 622 | 1.08e-38 | 154 |
| MS.gene48309.t1 | AT1G80010 | 26.196 | 439 | 283 | 12 | 146 | 573 | 253 | 661 | 2.57e-35 | 143 |
| MS.gene48309.t1 | AT1G52520 | 22.957 | 575 | 392 | 14 | 2 | 573 | 112 | 638 | 1.86e-31 | 131 |
| MS.gene48309.t1 | AT5G28530 | 22.680 | 582 | 326 | 22 | 5 | 571 | 84 | 556 | 1.94e-20 | 96.3 |
| MS.gene48309.t1 | AT5G28530 | 22.704 | 577 | 328 | 21 | 5 | 571 | 84 | 552 | 2.66e-20 | 95.9 |
Find 102 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 8.3:-17877298 | MS.gene48309:CDS |
| TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 8.3:-17877607 | MS.gene48309:CDS |
| AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 8.3:+17876472 | None:intergenic |
| CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 8.3:-17877340 | MS.gene48309:CDS |
| CAACAAGATTATGCTCTATT+TGG | 0.198611 | 8.3:-17878391 | MS.gene48309:CDS |
| TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 8.3:-17877888 | MS.gene48309:intron |
| CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 8.3:-17877855 | MS.gene48309:CDS |
| TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 8.3:+17877761 | None:intergenic |
| TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 8.3:+17876478 | None:intergenic |
| AATCAGATTTCGACTACAAT+TGG | 0.318540 | 8.3:-17877566 | MS.gene48309:CDS |
| TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 8.3:-17876626 | MS.gene48309:CDS |
| ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 8.3:+17877743 | None:intergenic |
| GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 8.3:+17878341 | None:intergenic |
| GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 8.3:-17877043 | MS.gene48309:CDS |
| TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 8.3:-17877466 | MS.gene48309:CDS |
| CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 8.3:-17876634 | MS.gene48309:CDS |
| AACAATAAATATCGGCCATT+AGG | 0.388497 | 8.3:-17878334 | MS.gene48309:intron |
| ACCGAACAAACAATAAATAT+CGG | 0.389395 | 8.3:-17878342 | MS.gene48309:CDS |
| GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 8.3:-17877467 | MS.gene48309:CDS |
| GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 8.3:+17876750 | None:intergenic |
| TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 8.3:+17878871 | None:intergenic |
| AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 8.3:-17876486 | MS.gene48309:intron |
| TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 8.3:+17876496 | None:intergenic |
| GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 8.3:-17876601 | MS.gene48309:CDS |
| CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 8.3:-17876918 | MS.gene48309:CDS |
| GATTATGATCTTCAAACCTT+GGG | 0.413114 | 8.3:+17876995 | None:intergenic |
| CGATTATGATCTTCAAACCT+TGG | 0.425681 | 8.3:+17876994 | None:intergenic |
| CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 8.3:-17878694 | MS.gene48309:CDS |
| AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 8.3:-17878812 | MS.gene48309:CDS |
| TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 8.3:+17877750 | None:intergenic |
| GAAAAGGTTGGTTGTAAAGC+TGG | 0.447509 | 8.3:-17878829 | MS.gene48309:CDS |
| CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 8.3:+17876817 | None:intergenic |
| CGTTATGTTTGTAACAAAGA+AGG | 0.449439 | 8.3:-17878946 | MS.gene48309:CDS |
| GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 8.3:-17878664 | MS.gene48309:CDS |
| TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 8.3:-17877676 | MS.gene48309:CDS |
| GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 8.3:-17877512 | MS.gene48309:CDS |
| ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 8.3:-17876917 | MS.gene48309:CDS |
| ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 8.3:-17878980 | MS.gene48309:CDS |
| GGGTTGTCACAGTCGACATT+GGG | 0.480993 | 8.3:-17876960 | MS.gene48309:CDS |
| GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 8.3:-17878619 | MS.gene48309:CDS |
| CTGTCTGTGAACCATCTGTT+GGG | 0.487793 | 8.3:-17876525 | MS.gene48309:CDS |
| TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 8.3:-17878551 | MS.gene48309:CDS |
| CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 8.3:+17878724 | None:intergenic |
| CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 8.3:-17878986 | MS.gene48309:CDS |
| TATGAGGAGGACACAACAAA+AGG | 0.490908 | 8.3:-17877150 | MS.gene48309:intron |
| ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 8.3:+17877875 | None:intergenic |
| ATCAGATTTCGACTACAATT+GGG | 0.491708 | 8.3:-17877565 | MS.gene48309:CDS |
| CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 8.3:-17878538 | MS.gene48309:CDS |
| ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 8.3:-17877326 | MS.gene48309:CDS |
| GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 8.3:+17877246 | None:intergenic |
| GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 8.3:-17878632 | MS.gene48309:CDS |
| TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 8.3:+17878446 | None:intergenic |
| GCTGTCTGTGAACCATCTGT+TGG | 0.504047 | 8.3:-17876526 | MS.gene48309:CDS |
| AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 8.3:+17878736 | None:intergenic |
| CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 8.3:-17877479 | MS.gene48309:CDS |
| ATCATAATCGACTTGATGAA+AGG | 0.507955 | 8.3:-17876981 | MS.gene48309:CDS |
| TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 8.3:+17878580 | None:intergenic |
| GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 8.3:-17877307 | MS.gene48309:CDS |
| ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 8.3:-17877461 | MS.gene48309:CDS |
| TGTCTATAAGATATATAAGT+GGG | 0.514682 | 8.3:-17878776 | MS.gene48309:CDS |
| GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 8.3:+17877001 | None:intergenic |
| TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 8.3:+17877358 | None:intergenic |
| TAACAAAGAAGGTTTCAAGA+AGG | 0.525236 | 8.3:-17878935 | MS.gene48309:CDS |
| TCATAATCGACTTGATGAAA+GGG | 0.526860 | 8.3:-17876980 | MS.gene48309:CDS |
| AGGGTTGTCACAGTCGACAT+TGG | 0.538587 | 8.3:-17876961 | MS.gene48309:CDS |
| AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 8.3:+17877363 | None:intergenic |
| ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 8.3:-17877149 | MS.gene48309:intron |
| AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 8.3:-17878934 | MS.gene48309:CDS |
| ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 8.3:+17877730 | None:intergenic |
| CTGAAATCCACCATGAATGT+TGG | 0.557140 | 8.3:-17876760 | MS.gene48309:CDS |
| AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 8.3:-17878484 | MS.gene48309:CDS |
| GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 8.3:-17878616 | MS.gene48309:CDS |
| TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 8.3:-17876674 | MS.gene48309:CDS |
| ATGTCTATAAGATATATAAG+TGG | 0.572287 | 8.3:-17878777 | MS.gene48309:CDS |
| GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 8.3:+17877245 | None:intergenic |
| TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 8.3:+17876514 | None:intergenic |
| TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 8.3:-17878625 | MS.gene48309:CDS |
| TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 8.3:-17876633 | MS.gene48309:CDS |
| ACCATATACACAGACCAGGC+TGG | 0.590176 | 8.3:-17877744 | MS.gene48309:CDS |
| ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 8.3:-17876638 | MS.gene48309:CDS |
| TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 8.3:-17877011 | MS.gene48309:CDS |
| TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 8.3:+17876558 | None:intergenic |
| GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 8.3:-17878545 | MS.gene48309:CDS |
| AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 8.3:-17878631 | MS.gene48309:CDS |
| AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 8.3:-17878542 | MS.gene48309:CDS |
| ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 8.3:-17876671 | MS.gene48309:CDS |
| ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 8.3:-17877248 | MS.gene48309:CDS |
| TTGATATCGTTGCGCTTCAG+TGG | 0.611060 | 8.3:+17876726 | None:intergenic |
| AGAACTGGACTGTCACATGT+TGG | 0.620791 | 8.3:+17878886 | None:intergenic |
| AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 8.3:+17877510 | None:intergenic |
| GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 8.3:-17878611 | MS.gene48309:CDS |
| ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 8.3:+17876996 | None:intergenic |
| GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 8.3:-17877675 | MS.gene48309:CDS |
| TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 8.3:+17876753 | None:intergenic |
| CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 8.3:-17877325 | MS.gene48309:CDS |
| GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 8.3:+17876775 | None:intergenic |
| GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 8.3:-17876649 | MS.gene48309:CDS |
| CATGTCGACATAAGAAACCC+CGG | 0.663279 | 8.3:+17876899 | None:intergenic |
| TCAAACCATATACACAGACC+AGG | 0.671057 | 8.3:-17877748 | MS.gene48309:CDS |
| TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 8.3:-17876916 | MS.gene48309:CDS |
| ATGTTGATAATGATAATGAG+AGG | 0.683310 | 8.3:-17877065 | MS.gene48309:CDS |
| TGTTGATAATGATAATGAGA+GGG | 0.689129 | 8.3:-17877064 | MS.gene48309:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACCATAATTATAGTTTAA+TGG | + | chr8.3:17878771-17878790 | None:intergenic | 15.0% |
| !! | AAACCATTAAACTATAATTA+TGG | - | chr8.3:17878765-17878784 | MS.gene48309:CDS | 15.0% |
| !!! | TGTTTTTTATGTTATAAGTT+AGG | - | chr8.3:17878524-17878543 | MS.gene48309:CDS | 15.0% |
| !! | ATGTCTATAAGATATATAAG+TGG | - | chr8.3:17876093-17876112 | MS.gene48309:intron | 20.0% |
| !! | CAATTCACAAAATAAGAAAT+CGG | - | chr8.3:17875884-17875903 | MS.gene48309:intron | 20.0% |
| !! | CATAATATTATTTGAAGGAA+AGG | + | chr8.3:17877704-17877723 | None:intergenic | 20.0% |
| !! | TGTCTATAAGATATATAAGT+GGG | - | chr8.3:17876094-17876113 | MS.gene48309:intron | 20.0% |
| !! | TTCCTTCAAATAATATTATG+AGG | - | chr8.3:17877704-17877723 | MS.gene48309:CDS | 20.0% |
| !!! | AATTTAATGTTCTGGTTTAT+GGG | - | chr8.3:17876711-17876730 | MS.gene48309:CDS | 20.0% |
| !!! | ACGCATTTATTACTATATTT+TGG | - | chr8.3:17878695-17878714 | MS.gene48309:CDS | 20.0% |
| !!! | ATGATGAAAAACTGTTTTAA+TGG | - | chr8.3:17877333-17877352 | MS.gene48309:CDS | 20.0% |
| !!! | CTATACATTTTCACATTTTT+TGG | - | chr8.3:17878667-17878686 | MS.gene48309:CDS | 20.0% |
| !!! | TGAATGTTTATATTGATTGA+AGG | - | chr8.3:17876683-17876702 | MS.gene48309:CDS | 20.0% |
| ! | AAAACACCTTGAAAAACATT+CGG | + | chr8.3:17877171-17877190 | None:intergenic | 25.0% |
| ! | AATCCAAATTAACAGTCTAA+TGG | + | chr8.3:17878728-17878747 | None:intergenic | 25.0% |
| ! | AATCCATTAGACTGTTAATT+TGG | - | chr8.3:17878722-17878741 | MS.gene48309:CDS | 25.0% |
| ! | AATTCTTGATTGTTATGCAT+TGG | - | chr8.3:17878622-17878641 | MS.gene48309:CDS | 25.0% |
| ! | ACAAAATAAGAAATCGGATA+AGG | - | chr8.3:17875890-17875909 | MS.gene48309:intron | 25.0% |
| ! | ACCGAACAAACAATAAATAT+CGG | - | chr8.3:17876528-17876547 | MS.gene48309:CDS | 25.0% |
| ! | AGTACAAAATACTAACCTAA+TGG | + | chr8.3:17876554-17876573 | None:intergenic | 25.0% |
| ! | CTCCTCATAATATTATTTGA+AGG | + | chr8.3:17877709-17877728 | None:intergenic | 25.0% |
| ! | CTTCAAATAATATTATGAGG+AGG | - | chr8.3:17877707-17877726 | MS.gene48309:CDS | 25.0% |
| ! | CTTTAGTCATTTCAACATTA+TGG | - | chr8.3:17877530-17877549 | MS.gene48309:CDS | 25.0% |
| ! | TGAAATTTGAATGAATGTTC+TGG | - | chr8.3:17876601-17876620 | MS.gene48309:CDS | 25.0% |
| ! | TGAATAAATGAAAAGCAAGA+TGG | + | chr8.3:17877669-17877688 | None:intergenic | 25.0% |
| ! | TGATGCTTTAACTAAAAAAG+CGG | - | chr8.3:17878555-17878574 | MS.gene48309:CDS | 25.0% |
| ! | TTTCGATGAGTTAACTAATT+TGG | - | chr8.3:17877263-17877282 | MS.gene48309:CDS | 25.0% |
| !! | AGGTTTAGAATTTAATGTTC+TGG | - | chr8.3:17876703-17876722 | MS.gene48309:CDS | 25.0% |
| !! | TGTTGTATTTTGTTCTGATT+TGG | - | chr8.3:17876959-17876978 | MS.gene48309:CDS | 25.0% |
| !! | TTGGTTTGAATATTATCTTC+TGG | - | chr8.3:17878641-17878660 | MS.gene48309:CDS | 25.0% |
| !! | TTTTCAATTACTGAGTTAAG+TGG | - | chr8.3:17878799-17878818 | MS.gene48309:CDS | 25.0% |
| !!! | ATGTTGATAATGATAATGAG+AGG | - | chr8.3:17877805-17877824 | MS.gene48309:CDS | 25.0% |
| !!! | CTTATTTTGTGAATTGTTCT+TGG | + | chr8.3:17875880-17875899 | None:intergenic | 25.0% |
| !!! | GAATTTAATGTTCTGGTTTA+TGG | - | chr8.3:17876710-17876729 | MS.gene48309:CDS | 25.0% |
| !!! | GCTTTAATAAATTCTAAAGC+TGG | - | chr8.3:17876206-17876225 | MS.gene48309:intron | 25.0% |
| !!! | TGAAAAACTGTTTTAATGGA+AGG | - | chr8.3:17877337-17877356 | MS.gene48309:CDS | 25.0% |
| !!! | TGTTGATAATGATAATGAGA+GGG | - | chr8.3:17877806-17877825 | MS.gene48309:CDS | 25.0% |
| AAACACATATGATCTTTCCA+TGG | + | chr8.3:17876774-17876793 | None:intergenic | 30.0% | |
| AACAAAGAAGGTTTCAAGAA+GGG | - | chr8.3:17875936-17875955 | MS.gene48309:intron | 30.0% | |
| AACAATAAATATCGGCCATT+AGG | - | chr8.3:17876536-17876555 | MS.gene48309:CDS | 30.0% | |
| AAGAAAGACCAAATCCAATT+AGG | - | chr8.3:17878384-17878403 | MS.gene48309:CDS | 30.0% | |
| AATCAGATTTCGACTACAAT+TGG | - | chr8.3:17877304-17877323 | MS.gene48309:CDS | 30.0% | |
| AGAACATCTTATGAAGTGAT+GGG | - | chr8.3:17876239-17876258 | MS.gene48309:intron | 30.0% | |
| ATCAGATTTCGACTACAATT+GGG | - | chr8.3:17877305-17877324 | MS.gene48309:CDS | 30.0% | |
| ATGATTGTCAAAACCAAGAA+AGG | + | chr8.3:17876998-17877017 | None:intergenic | 30.0% | |
| ATTATGATCTTCAAACCTTG+GGG | + | chr8.3:17877877-17877896 | None:intergenic | 30.0% | |
| CAACAAGATTATGCTCTATT+TGG | - | chr8.3:17876479-17876498 | MS.gene48309:intron | 30.0% | |
| CGTTATGTTTGTAACAAAGA+AGG | - | chr8.3:17875924-17875943 | MS.gene48309:intron | 30.0% | |
| CTGGTATATGTGTGTTAATT+TGG | - | chr8.3:17876640-17876659 | MS.gene48309:CDS | 30.0% | |
| GAGAATGCAAAGAAAAATCT+CGG | - | chr8.3:17877219-17877238 | MS.gene48309:intron | 30.0% | |
| GATTATGATCTTCAAACCTT+GGG | + | chr8.3:17877878-17877897 | None:intergenic | 30.0% | |
| GCCGATATTTATTGTTTGTT+CGG | + | chr8.3:17876532-17876551 | None:intergenic | 30.0% | |
| TAAAGAAAAACCAGAGGAAA+AGG | - | chr8.3:17876025-17876044 | MS.gene48309:intron | 30.0% | |
| TAAAGAATCGAACAAGTGAA+TGG | + | chr8.3:17877515-17877534 | None:intergenic | 30.0% | |
| TAACAAAGAAGGTTTCAAGA+AGG | - | chr8.3:17875935-17875954 | MS.gene48309:intron | 30.0% | |
| TGGATATCATAGTAAAAACC+TGG | + | chr8.3:17876407-17876426 | None:intergenic | 30.0% | |
| TGGTGTATACTTGTTTACTA+CGG | + | chr8.3:17877649-17877668 | None:intergenic | 30.0% | |
| TTCTTTGACCTAATTGGATT+TGG | + | chr8.3:17878395-17878414 | None:intergenic | 30.0% | |
| TTTAAGTCCGAAAATCGAAA+AGG | + | chr8.3:17876293-17876312 | None:intergenic | 30.0% | |
| TTTCTATTTACACAGCACAA+TGG | - | chr8.3:17876918-17876937 | MS.gene48309:CDS | 30.0% | |
| ! | AAATGCTCTGGTTTATGTAA+TGG | + | chr8.3:17876137-17876156 | None:intergenic | 30.0% |
| ! | AGCTGGAATATATTTGAAGT+TGG | - | chr8.3:17876058-17876077 | MS.gene48309:intron | 30.0% |
| ! | CAAAGTTTTCACAATTGAGA+AGG | - | chr8.3:17877764-17877783 | MS.gene48309:CDS | 30.0% |
| ! | GAATCTTCCTTTTCGATTTT+CGG | - | chr8.3:17876283-17876302 | MS.gene48309:intron | 30.0% |
| ! | GCATCTGAAATATTTCTCAA+CGG | - | chr8.3:17878221-17878240 | MS.gene48309:intron | 30.0% |
| ! | TATGGTTTGAGGTTTCTTAT+TGG | + | chr8.3:17877112-17877131 | None:intergenic | 30.0% |
| ! | TCAATTCCGAATGTTTTTCA+AGG | - | chr8.3:17877162-17877181 | MS.gene48309:intron | 30.0% |
| ! | TCAGTTTTCAATTCAATGAG+TGG | + | chr8.3:17878943-17878962 | None:intergenic | 30.0% |
| ! | TGAGGCTTTAACAAATTAAG+CGG | - | chr8.3:17878493-17878512 | MS.gene48309:CDS | 30.0% |
| ! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr8.3:17878377-17878396 | None:intergenic | 30.0% |
| !! | ACATGTTTTCAAGATTTTGG+AGG | - | chr8.3:17877989-17878008 | MS.gene48309:intron | 30.0% |
| !! | ATCATAATCGACTTGATGAA+AGG | - | chr8.3:17877889-17877908 | MS.gene48309:intron | 30.0% |
| !! | ATGTTCTGGTTTAGAATTGA+AGG | - | chr8.3:17876615-17876634 | MS.gene48309:CDS | 30.0% |
| !! | GAGGAGTTTCTTATTTCTAA+AGG | - | chr8.3:17878269-17878288 | MS.gene48309:intron | 30.0% |
| !! | TCATAATCGACTTGATGAAA+GGG | - | chr8.3:17877890-17877909 | MS.gene48309:intron | 30.0% |
| !! | TCGACATGTTTTCAAGATTT+TGG | - | chr8.3:17877986-17878005 | MS.gene48309:intron | 30.0% |
| !!! | AAGACATAGCCAGTATTTTT+TGG | - | chr8.3:17876441-17876460 | MS.gene48309:intron | 30.0% |
| !!! | AGACATAGCCAGTATTTTTT+GGG | - | chr8.3:17876442-17876461 | MS.gene48309:intron | 30.0% |
| !!! | CTGCACAATATGTTTTAAAG+CGG | - | chr8.3:17878054-17878073 | MS.gene48309:intron | 30.0% |
| !!! | GTTTTTCAAGGTGTTTTTCA+TGG | - | chr8.3:17877174-17877193 | MS.gene48309:intron | 30.0% |
| ACATTATGGTTCAGAGAATG+AGG | - | chr8.3:17877544-17877563 | MS.gene48309:CDS | 35.0% | |
| CATAAATTCCAAGGCAAGAT+AGG | + | chr8.3:17876741-17876760 | None:intergenic | 35.0% | |
| CATTATGGTTCAGAGAATGA+GGG | - | chr8.3:17877545-17877564 | MS.gene48309:CDS | 35.0% | |
| CGAGAAGTAAATGAAGTTCA+AGG | - | chr8.3:17876176-17876195 | MS.gene48309:intron | 35.0% | |
| CGATTATGATCTTCAAACCT+TGG | + | chr8.3:17877879-17877898 | None:intergenic | 35.0% | |
| CTCATTCAAATCGTATGCAT+TGG | - | chr8.3:17877391-17877410 | MS.gene48309:CDS | 35.0% | |
| GAAAGCTAAAGAAAAACCAG+AGG | - | chr8.3:17876019-17876038 | MS.gene48309:intron | 35.0% | |
| GAAGCAAAAGAAAGATGATG+AGG | - | chr8.3:17878475-17878494 | MS.gene48309:CDS | 35.0% | |
| GACAGAAATTCCTTATAGCT+CGG | - | chr8.3:17878450-17878469 | MS.gene48309:CDS | 35.0% | |
| GAGAACATCTTATGAAGTGA+TGG | - | chr8.3:17876238-17876257 | MS.gene48309:intron | 35.0% | |
| GTCTGCTTAATCCTAAAAAC+AGG | - | chr8.3:17875961-17875980 | MS.gene48309:intron | 35.0% | |
| TCTAATGACAACTCGTCAAA+AGG | - | chr8.3:17876319-17876338 | MS.gene48309:intron | 35.0% | |
| TGTACAGAGCATAAATTCCA+AGG | + | chr8.3:17876750-17876769 | None:intergenic | 35.0% | |
| TTCTCATACTCAACAAGAAC+TGG | + | chr8.3:17876002-17876021 | None:intergenic | 35.0% | |
| ! | CATCGTAAGAGTGTGTTATT+TGG | - | chr8.3:17877015-17877034 | MS.gene48309:CDS | 35.0% |
| ! | GAGGCTTTAACAAATTAAGC+GGG | - | chr8.3:17878494-17878513 | MS.gene48309:CDS | 35.0% |
| ! | GGTTTCGAATGTTGATGTTT+TGG | - | chr8.3:17877827-17877846 | MS.gene48309:CDS | 35.0% |
| ! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr8.3:17877474-17877493 | MS.gene48309:CDS | 35.0% |
| ! | TGGTTTAGAATTGAAGGTTC+TGG | - | chr8.3:17876621-17876640 | MS.gene48309:CDS | 35.0% |
| ! | TTTTAATGGAAGGCCTACTT+CGG | - | chr8.3:17877347-17877366 | MS.gene48309:CDS | 35.0% |
| ! | TTTTTCATGGTCTTTGCTCA+TGG | - | chr8.3:17877187-17877206 | MS.gene48309:intron | 35.0% |
| !! | ACTGCTTTTGAAGACTTAGA+AGG | + | chr8.3:17878323-17878342 | None:intergenic | 35.0% |
| !! | CGCTTTAAAACATATTGTGC+AGG | + | chr8.3:17878056-17878075 | None:intergenic | 35.0% |
| !! | TATGCATTGGTCTTCAGTTT+GGG | - | chr8.3:17877404-17877423 | MS.gene48309:CDS | 35.0% |
| !! | TTCAAGATTTTGGAGGTCTT+AGG | - | chr8.3:17877996-17878015 | MS.gene48309:intron | 35.0% |
| !!! | AGACATCAGCTACTTTTGAT+TGG | - | chr8.3:17877058-17877077 | MS.gene48309:CDS | 35.0% |
| !!! | CACAATATGTTTTAAAGCGG+TGG | - | chr8.3:17878057-17878076 | MS.gene48309:intron | 35.0% |
| AATCGAACAAGTGAATGGTC+TGG | + | chr8.3:17877510-17877529 | None:intergenic | 40.0% | |
| ACCTATGATCTTTGCATAGC+TGG | + | chr8.3:17876868-17876887 | None:intergenic | 40.0% | |
| AGTCGCTTCTTTGACCTAAT+TGG | + | chr8.3:17878401-17878420 | None:intergenic | 40.0% | |
| ATGAGGAGGACACAACAAAA+GGG | - | chr8.3:17877721-17877740 | MS.gene48309:CDS | 40.0% | |
| ATGTCGTATGTTTGAGAACC+GGG | - | chr8.3:17877953-17877972 | MS.gene48309:intron | 40.0% | |
| ATTTATGCTCTGTACAGCCA+TGG | - | chr8.3:17876754-17876773 | MS.gene48309:CDS | 40.0% | |
| ATTTCTCAACGGTGTTCTTG+AGG | - | chr8.3:17878232-17878251 | MS.gene48309:intron | 40.0% | |
| CATGTCGTATGTTTGAGAAC+CGG | - | chr8.3:17877952-17877971 | MS.gene48309:intron | 40.0% | |
| CTGAAATCCACCATGAATGT+TGG | - | chr8.3:17878110-17878129 | MS.gene48309:intron | 40.0% | |
| GAAAAACCAGAGGAAAAGGT+TGG | - | chr8.3:17876029-17876048 | MS.gene48309:intron | 40.0% | |
| GATTTCAGCTTATCGACAGA+CGG | + | chr8.3:17878098-17878117 | None:intergenic | 40.0% | |
| GTCAATTCTGATGTAATGCG+CGG | - | chr8.3:17878886-17878905 | MS.gene48309:CDS | 40.0% | |
| GTCTTTAGTGCCAACATTCA+TGG | + | chr8.3:17878123-17878142 | None:intergenic | 40.0% | |
| TATGAGGAGGACACAACAAA+AGG | - | chr8.3:17877720-17877739 | MS.gene48309:CDS | 40.0% | |
| TCAAACCATATACACAGACC+AGG | - | chr8.3:17877122-17877141 | MS.gene48309:CDS | 40.0% | |
| TCCAGCTATGCAAAGATCAT+AGG | - | chr8.3:17876864-17876883 | MS.gene48309:CDS | 40.0% | |
| TCCATCTGCCCAAAAAATAC+TGG | + | chr8.3:17876453-17876472 | None:intergenic | 40.0% | |
| TGGTCTGTGTATATGGTTTG+AGG | + | chr8.3:17877123-17877142 | None:intergenic | 40.0% | |
| TTCATTTCAGCTGCCTTTCT+TGG | - | chr8.3:17876982-17877001 | MS.gene48309:CDS | 40.0% | |
| TTGAAGAAAACCTTTCCCCA+AGG | - | chr8.3:17877859-17877878 | MS.gene48309:CDS | 40.0% | |
| TTTAGTGCCAACATTCATGG+TGG | + | chr8.3:17878120-17878139 | None:intergenic | 40.0% | |
| TTTGCTTCTTCCGAGCTATA+AGG | + | chr8.3:17878463-17878482 | None:intergenic | 40.0% | |
| ! | GAAAAGGTTGGTTGTAAAGC+TGG | - | chr8.3:17876041-17876060 | MS.gene48309:intron | 40.0% |
| ! | TCATGCTGAGTTGGACTTTA+AGG | - | chr8.3:17877572-17877591 | MS.gene48309:CDS | 40.0% |
| ! | TGAAGACTTAGAAGGCGTAA+CGG | + | chr8.3:17878315-17878334 | None:intergenic | 40.0% |
| ! | TTACAACCAACCTTTTCCTC+TGG | + | chr8.3:17876038-17876057 | None:intergenic | 40.0% |
| !! | AAGATTTTGGAGGTCTTAGG+TGG | - | chr8.3:17877999-17878018 | MS.gene48309:intron | 40.0% |
| !! | GTATGCATTGGTCTTCAGTT+TGG | - | chr8.3:17877403-17877422 | MS.gene48309:CDS | 40.0% |
| !! | TCACATGTTGGCCTGTTTTT+AGG | + | chr8.3:17875975-17875994 | None:intergenic | 40.0% |
| !! | TCTTATGAAGTGATGGGTCA+AGG | - | chr8.3:17876245-17876264 | MS.gene48309:intron | 40.0% |
| AACTCGTCAAAAGGAGATGG+TGG | - | chr8.3:17876328-17876347 | MS.gene48309:intron | 45.0% | |
| AATGAAGCTCTCTCGAAACC+AGG | - | chr8.3:17876386-17876405 | MS.gene48309:intron | 45.0% | |
| AGAACTGGACTGTCACATGT+TGG | + | chr8.3:17875987-17876006 | None:intergenic | 45.0% | |
| AGCCACTTAAAGTCCGAAGT+AGG | + | chr8.3:17877363-17877382 | None:intergenic | 45.0% | |
| ATCCCAACAGTCAGCTTATG+CGG | - | chr8.3:17877622-17877641 | MS.gene48309:CDS | 45.0% | |
| CATGTCGACATAAGAAACCC+CGG | + | chr8.3:17877974-17877993 | None:intergenic | 45.0% | |
| CTCAAGTAGCACAAATGCTC+TGG | + | chr8.3:17876149-17876168 | None:intergenic | 45.0% | |
| CTGTCTGTGAACCATCTGTT+GGG | - | chr8.3:17878345-17878364 | MS.gene48309:CDS | 45.0% | |
| GACAACTCGTCAAAAGGAGA+TGG | - | chr8.3:17876325-17876344 | MS.gene48309:intron | 45.0% | |
| GAGGGATAATCATGCTGAGT+TGG | - | chr8.3:17877563-17877582 | MS.gene48309:CDS | 45.0% | |
| GATCTTCAAACCTTGGGGAA+AGG | + | chr8.3:17877872-17877891 | None:intergenic | 45.0% | |
| TGTCGTATGTTTGAGAACCG+GGG | - | chr8.3:17877954-17877973 | MS.gene48309:intron | 45.0% | |
| TGTCTTCTGCAGCATCAACT+TGG | + | chr8.3:17876427-17876446 | None:intergenic | 45.0% | |
| TGTTCTTGAGGCAGGGAAAA+AGG | - | chr8.3:17878244-17878263 | MS.gene48309:intron | 45.0% | |
| TTGATATCGTTGCGCTTCAG+TGG | + | chr8.3:17878147-17878166 | None:intergenic | 45.0% | |
| ! | GTGAGGTCACATTTTACAGC+TGG | - | chr8.3:17877426-17877445 | MS.gene48309:CDS | 45.0% |
| !! | ATTGGTCTTCAGTTTGGGTG+AGG | - | chr8.3:17877409-17877428 | MS.gene48309:CDS | 45.0% |
| !!! | GCCAGTATTTTTTGGGCAGA+TGG | - | chr8.3:17876449-17876468 | MS.gene48309:intron | 45.0% |
| ACCAGCCTGGTCTGTGTATA+TGG | + | chr8.3:17877130-17877149 | None:intergenic | 50.0% | |
| ACCATATACACAGACCAGGC+TGG | - | chr8.3:17877126-17877145 | MS.gene48309:CDS | 50.0% | |
| AGGGTTGTCACAGTCGACAT+TGG | - | chr8.3:17877909-17877928 | MS.gene48309:intron | 50.0% | |
| GACCGCATAAGCTGACTGTT+GGG | + | chr8.3:17877627-17877646 | None:intergenic | 50.0% | |
| GCTGTCTGTGAACCATCTGT+TGG | - | chr8.3:17878344-17878363 | MS.gene48309:CDS | 50.0% | |
| GGCCTACTTCGGACTTTAAG+TGG | - | chr8.3:17877358-17877377 | MS.gene48309:CDS | 50.0% | |
| GGGTTGTCACAGTCGACATT+GGG | - | chr8.3:17877910-17877929 | MS.gene48309:intron | 50.0% | |
| GGTCTTTGCTCATGGCACAT+GGG | - | chr8.3:17877195-17877214 | MS.gene48309:intron | 50.0% | |
| TACACGTGTTTGCGCAGATG+CGG | - | chr8.3:17878196-17878215 | MS.gene48309:intron | 50.0% | |
| TCAACGGTGTTCTTGAGGCA+GGG | - | chr8.3:17878237-17878256 | MS.gene48309:intron | 50.0% | |
| TGGGTGATCCTATCTTGCCT+TGG | - | chr8.3:17876730-17876749 | MS.gene48309:CDS | 50.0% | |
| TGGTCTTTGCTCATGGCACA+TGG | - | chr8.3:17877194-17877213 | MS.gene48309:intron | 50.0% | |
| ! | TTTGGTGCAGTCCCAACAGA+TGG | + | chr8.3:17878359-17878378 | None:intergenic | 50.0% |
| !! | GAAGTGATGGGTCAAGGAGT+TGG | - | chr8.3:17876251-17876270 | MS.gene48309:intron | 50.0% |
| ACTTCAACAACGCACCAGCC+TGG | + | chr8.3:17877143-17877162 | None:intergenic | 55.0% | |
| CTCAACGGTGTTCTTGAGGC+AGG | - | chr8.3:17878236-17878255 | MS.gene48309:intron | 55.0% | |
| GGACCGCATAAGCTGACTGT+TGG | + | chr8.3:17877628-17877647 | None:intergenic | 55.0% | |
| TGAGGCAGGGAAAAAGGCAG+AGG | - | chr8.3:17878250-17878269 | MS.gene48309:intron | 55.0% | |
| ! | CGTCAAAAGGAGATGGTGGC+TGG | - | chr8.3:17876332-17876351 | MS.gene48309:intron | 55.0% |
| !! | GTGATGGGTCAAGGAGTTGG+AGG | - | chr8.3:17876254-17876273 | MS.gene48309:intron | 55.0% |
| ACGTGTTTGCGCAGATGCGG+AGG | - | chr8.3:17878199-17878218 | MS.gene48309:intron | 60.0% | |
| GGGTCAAGGAGTTGGAGGCA+CGG | - | chr8.3:17876259-17876278 | MS.gene48309:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 17875867 | 17879025 | 17875867 | ID=MS.gene48309 |
| chr8.3 | mRNA | 17875867 | 17879025 | 17875867 | ID=MS.gene48309.t1;Parent=MS.gene48309 |
| chr8.3 | exon | 17878335 | 17879025 | 17878335 | ID=MS.gene48309.t1.exon1;Parent=MS.gene48309.t1 |
| chr8.3 | CDS | 17878335 | 17879025 | 17878335 | ID=cds.MS.gene48309.t1;Parent=MS.gene48309.t1 |
| chr8.3 | exon | 17877242 | 17877900 | 17877242 | ID=MS.gene48309.t1.exon2;Parent=MS.gene48309.t1 |
| chr8.3 | CDS | 17877242 | 17877900 | 17877242 | ID=cds.MS.gene48309.t1;Parent=MS.gene48309.t1 |
| chr8.3 | exon | 17876487 | 17877166 | 17876487 | ID=MS.gene48309.t1.exon3;Parent=MS.gene48309.t1 |
| chr8.3 | CDS | 17876487 | 17877166 | 17876487 | ID=cds.MS.gene48309.t1;Parent=MS.gene48309.t1 |
| chr8.3 | exon | 17875867 | 17875882 | 17875867 | ID=MS.gene48309.t1.exon4;Parent=MS.gene48309.t1 |
| chr8.3 | CDS | 17875867 | 17875882 | 17875867 | ID=cds.MS.gene48309.t1;Parent=MS.gene48309.t1 |
| Gene Sequence |
| Protein sequence |
