AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene48373

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48373.t1 MTR_4g105660 92.431 436 27 2 18 453 1 430 0.0 817
MS.gene48373.t1 MTR_3g077650 54.897 439 173 13 16 445 4 426 2.95e-149 432
MS.gene48373.t1 MTR_5g049190 51.254 279 91 5 166 443 2 236 9.44e-86 263
MS.gene48373.t1 MTR_5g070020 62.411 141 44 2 189 320 111 251 1.03e-56 191
MS.gene48373.t1 MTR_4g088015 68.504 127 40 0 196 322 219 345 1.39e-56 194
MS.gene48373.t1 MTR_3g463400 66.667 132 37 2 196 321 131 261 3.77e-56 192
MS.gene48373.t1 MTR_7g037260 67.480 123 40 0 196 318 143 265 1.33e-55 189
MS.gene48373.t1 MTR_7g451170 69.672 122 37 0 197 318 190 311 4.47e-55 189
MS.gene48373.t1 MTR_7g037130 62.602 123 46 0 196 318 143 265 6.78e-50 174
MS.gene48373.t1 MTR_7g035350 56.489 131 56 1 197 326 224 354 5.80e-45 162
MS.gene48373.t1 MTR_7g450950 49.686 159 68 3 169 325 138 286 1.61e-44 159
MS.gene48373.t1 MTR_1g057980 49.419 172 77 4 159 321 34 204 7.46e-44 155
MS.gene48373.t1 MTR_7g061330 60.526 114 45 0 196 309 111 224 3.68e-40 152
MS.gene48373.t1 MTR_7g461410 60.526 114 45 0 196 309 111 224 3.68e-40 152
MS.gene48373.t1 MTR_7g061330 60.526 114 45 0 196 309 75 188 5.67e-40 150
MS.gene48373.t1 MTR_1g026870 61.165 103 40 0 196 298 83 185 2.81e-38 148
MS.gene48373.t1 MTR_3g110028 59.223 103 42 0 196 298 83 185 1.22e-37 146
MS.gene48373.t1 MTR_4g019370 58.824 102 42 0 197 298 37 138 9.47e-36 135
MS.gene48373.t1 MTR_5g010650 58.763 97 40 0 196 292 108 204 2.86e-34 134
MS.gene48373.t1 MTR_5g016510 53.846 104 48 0 197 300 4 107 5.25e-34 130
MS.gene48373.t1 MTR_3g101290 51.961 102 49 0 197 298 36 137 1.49e-33 126
MS.gene48373.t1 MTR_4g094982 51.923 104 50 0 197 300 4 107 3.41e-33 126
MS.gene48373.t1 MTR_5g082910 53.061 98 46 0 197 294 18 115 4.56e-30 118
MS.gene48373.t1 MTR_6g015455 50.000 104 52 0 197 300 4 107 6.14e-30 124
MS.gene48373.t1 MTR_8g027345 47.826 115 57 2 193 304 9 123 2.84e-28 114
MS.gene48373.t1 MTR_4g082040 43.307 127 70 1 195 321 102 226 5.86e-28 115
MS.gene48373.t1 MTR_5g041570 41.844 141 76 3 197 337 133 267 1.14e-27 114
MS.gene48373.t1 MTR_5g029840 46.729 107 56 1 196 301 12 118 1.70e-27 112
MS.gene48373.t1 MTR_6g027340 47.525 101 53 0 198 298 16 116 2.28e-27 108
MS.gene48373.t1 MTR_1g110460 28.720 289 157 8 180 419 9 297 2.64e-27 111
MS.gene48373.t1 MTR_4g478180 51.456 103 47 2 198 298 15 116 3.52e-27 112
MS.gene48373.t1 MTR_3g052450 48.571 105 52 2 196 298 40 144 7.65e-27 113
MS.gene48373.t1 MTR_6g027360 47.573 103 54 0 196 298 76 178 8.27e-27 110
MS.gene48373.t1 MTR_4g100720 48.039 102 52 1 193 293 10 111 1.01e-26 106
MS.gene48373.t1 MTR_6g009430 46.364 110 58 1 193 301 9 118 1.24e-26 110
MS.gene48373.t1 MTR_3g089045 34.307 274 134 11 198 435 16 279 1.61e-26 108
MS.gene48373.t1 MTR_2g011660 44.737 114 62 1 186 298 3 116 1.63e-26 110
MS.gene48373.t1 MTR_3g052430 50.000 106 49 3 196 298 41 145 2.21e-26 112
MS.gene48373.t1 MTR_3g011610 49.533 107 50 3 194 297 35 140 2.61e-26 111
MS.gene48373.t1 MTR_8g042410 41.860 129 70 3 189 315 30 155 3.79e-26 111
MS.gene48373.t1 MTR_3g461490 45.283 106 57 1 196 300 12 117 3.84e-26 108
MS.gene48373.t1 MTR_4g091490 44.737 114 62 1 186 298 3 116 4.10e-26 108
MS.gene48373.t1 MTR_5g007370 47.573 103 51 2 198 298 14 115 5.00e-26 107
MS.gene48373.t1 MTR_2g089620 46.729 107 56 1 193 298 9 115 5.50e-26 108
MS.gene48373.t1 MTR_0008s0390 43.478 115 62 2 186 298 3 116 6.52e-26 106
MS.gene48373.t1 MTR_6g074860 41.985 131 74 1 195 325 1 129 7.54e-26 105
MS.gene48373.t1 MTR_8g095390 47.170 106 54 2 198 301 14 119 8.46e-26 107
MS.gene48373.t1 MTR_4g073420 49.533 107 51 2 198 302 14 119 9.41e-26 106
MS.gene48373.t1 MTR_7g117730 49.485 97 48 1 198 293 14 110 1.12e-25 105
MS.gene48373.t1 MTR_4g125520 37.423 163 89 5 198 355 14 168 1.35e-25 106
MS.gene48373.t1 MTR_5g079670 47.222 108 54 2 196 301 11 117 1.93e-25 103
MS.gene48373.t1 MTR_3g097450 49.533 107 50 3 198 301 14 119 1.94e-25 105
MS.gene48373.t1 MTR_3g077110 43.925 107 57 2 198 302 14 119 2.57e-25 106
MS.gene48373.t1 MTR_1g112760 42.857 112 61 2 193 302 10 120 2.68e-25 103
MS.gene48373.t1 MTR_7g076740 48.544 103 51 1 193 293 9 111 3.93e-25 105
MS.gene48373.t1 MTR_2g064160 46.667 105 53 2 196 298 11 114 4.87e-25 105
MS.gene48373.t1 MTR_8g020490 50.467 107 50 3 198 302 10 115 5.10e-25 103
MS.gene48373.t1 MTR_8g031360 49.515 103 50 1 193 293 10 112 5.66e-25 104
MS.gene48373.t1 MTR_4g102380 45.045 111 58 2 193 301 9 118 6.41e-25 103
MS.gene48373.t1 MTR_0063s0090 33.491 212 124 8 193 392 9 215 6.97e-25 102
MS.gene48373.t1 MTR_0251s0050 42.609 115 63 2 186 298 3 116 7.22e-25 103
MS.gene48373.t1 MTR_7g011170 44.144 111 61 1 192 301 8 118 1.10e-24 103
MS.gene48373.t1 MTR_1g045610 51.042 96 44 2 198 291 23 117 1.22e-24 102
MS.gene48373.t1 MTR_2g034790 29.333 225 135 6 192 411 8 213 1.24e-24 104
MS.gene48373.t1 MTR_0008s0470 39.200 125 73 2 198 320 15 138 1.25e-24 103
MS.gene48373.t1 MTR_5g010020 47.475 99 51 1 196 293 12 110 1.44e-24 104
MS.gene48373.t1 MTR_8g098860 43.925 107 59 1 196 301 12 118 1.49e-24 103
MS.gene48373.t1 MTR_5g078140 45.045 111 58 2 193 301 9 118 1.64e-24 103
MS.gene48373.t1 MTR_3g074520 47.573 103 51 2 198 298 14 115 2.34e-24 103
MS.gene48373.t1 MTR_2g089420 34.211 190 102 6 198 383 13 183 2.63e-24 105
MS.gene48373.t1 MTR_1g073170 50.000 96 45 2 198 291 22 116 2.80e-24 101
MS.gene48373.t1 MTR_4g121460 42.593 108 61 1 192 298 8 115 3.17e-24 103
MS.gene48373.t1 MTR_2g097910 44.118 102 56 1 198 298 22 123 3.92e-24 102
MS.gene48373.t1 MTR_2g089450 43.590 117 61 3 198 312 14 127 5.34e-24 100
MS.gene48373.t1 MTR_5g062790 40.800 125 70 3 198 320 11 133 5.37e-24 102
MS.gene48373.t1 MTR_5g088640 45.098 102 54 2 198 297 14 115 5.88e-24 101
MS.gene48373.t1 MTR_8g017440 39.655 116 67 2 196 309 12 126 5.89e-24 102
MS.gene48373.t1 MTR_5g088080 45.098 102 54 2 198 297 14 115 6.25e-24 100
MS.gene48373.t1 MTR_5g088150 45.098 102 54 2 198 297 14 115 6.25e-24 100
MS.gene48373.t1 MTR_5g488210 45.098 102 54 2 198 297 14 115 6.25e-24 100
MS.gene48373.t1 MTR_3g065440 44.144 111 59 2 193 301 9 118 6.34e-24 102
MS.gene48373.t1 MTR_1g043080 46.296 108 54 3 186 291 3 108 7.36e-24 100
MS.gene48373.t1 MTR_1g100653 43.966 116 61 3 196 309 12 125 7.48e-24 101
MS.gene48373.t1 MTR_1g076150 40.678 118 67 2 192 307 8 124 7.82e-24 100
MS.gene48373.t1 MTR_4g105130 41.509 106 61 1 198 302 14 119 8.26e-24 102
MS.gene48373.t1 MTR_5g088610 42.982 114 61 3 198 309 11 122 8.39e-24 102
MS.gene48373.t1 MTR_1g085040 44.660 103 54 2 198 298 14 115 9.91e-24 102
MS.gene48373.t1 MTR_8g006470 47.115 104 53 2 196 297 10 113 1.06e-23 100
MS.gene48373.t1 MTR_8g017540 40.650 123 67 3 196 316 58 176 1.19e-23 102
MS.gene48373.t1 MTR_5g488170 45.098 102 54 2 198 297 14 115 1.51e-23 99.4
MS.gene48373.t1 MTR_1g021230 45.714 105 54 2 196 298 57 160 1.59e-23 102
MS.gene48373.t1 MTR_7g086960 35.152 165 101 3 198 357 89 252 1.62e-23 101
MS.gene48373.t1 MTR_6g027370 43.137 102 58 0 197 298 98 199 1.86e-23 101
MS.gene48373.t1 MTR_3g028740 43.925 107 59 1 193 298 19 125 1.97e-23 101
MS.gene48373.t1 MTR_2g099740 43.810 105 56 2 196 298 12 115 2.07e-23 102
MS.gene48373.t1 MTR_2g095520 46.602 103 53 2 193 293 9 111 2.18e-23 100
MS.gene48373.t1 MTR_1g043050 44.860 107 57 2 186 291 3 108 2.72e-23 99.0
MS.gene48373.t1 MTR_7g035075 46.392 97 51 1 196 291 14 110 2.85e-23 97.8
MS.gene48373.t1 MTR_5g042030 47.059 102 53 1 198 298 9 110 2.91e-23 99.8
MS.gene48373.t1 MTR_4g485530 43.396 106 59 1 198 302 14 119 2.94e-23 97.1
MS.gene48373.t1 MTR_2g088170 51.376 109 49 3 193 298 26 133 4.23e-23 101
MS.gene48373.t1 MTR_7g111290 47.423 97 48 2 198 292 14 109 5.05e-23 100
MS.gene48373.t1 MTR_4g057635 43.519 108 59 2 193 298 9 116 5.08e-23 99.8
MS.gene48373.t1 MTR_4g065017 44.118 102 56 1 198 298 19 120 5.62e-23 99.8
MS.gene48373.t1 MTR_1g085640 38.739 111 67 1 193 302 9 119 6.88e-23 100
MS.gene48373.t1 MTR_4g063100 44.340 106 56 2 195 298 6 110 7.86e-23 97.4
MS.gene48373.t1 MTR_1g017140 38.346 133 73 3 193 316 9 141 9.40e-23 99.4
MS.gene48373.t1 MTR_4g029540 45.192 104 55 2 196 297 10 113 9.69e-23 98.2
MS.gene48373.t1 MTR_7g110830 40.566 106 62 1 198 302 14 119 9.72e-23 99.8
MS.gene48373.t1 MTR_6g090405 41.284 109 62 2 193 299 9 117 1.04e-22 97.4
MS.gene48373.t1 MTR_0140s0030 43.243 111 62 1 192 301 9 119 1.08e-22 99.0
MS.gene48373.t1 MTR_0489s0020 43.243 111 62 1 192 301 9 119 1.08e-22 99.0
MS.gene48373.t1 MTR_5g079290 40.367 109 64 1 196 303 17 125 1.17e-22 97.4
MS.gene48373.t1 MTR_7g096930 45.545 101 54 1 192 291 8 108 1.48e-22 97.4
MS.gene48373.t1 MTR_1g017000 40.000 105 61 2 196 298 12 116 2.07e-22 96.3
MS.gene48373.t1 MTR_3g083540 41.176 102 59 1 193 293 38 139 2.17e-22 97.4
MS.gene48373.t1 MTR_3g103570 43.519 108 59 2 193 298 9 116 2.28e-22 98.2
MS.gene48373.t1 MTR_5g014990 43.519 108 59 2 193 298 9 116 2.58e-22 97.4
MS.gene48373.t1 MTR_6g006030 46.939 98 49 2 196 291 14 110 2.84e-22 94.7
MS.gene48373.t1 MTR_7g010210 42.056 107 61 1 196 301 12 118 2.90e-22 97.4
MS.gene48373.t1 MTR_8g017500 40.000 115 66 2 186 298 2 115 3.36e-22 97.8
MS.gene48373.t1 MTR_1g086530 39.695 131 74 3 195 321 32 161 3.49e-22 96.3
MS.gene48373.t1 MTR_4g082290 41.441 111 64 1 192 301 8 118 3.87e-22 98.6
MS.gene48373.t1 MTR_7g115650 40.952 105 61 1 198 301 14 118 4.53e-22 94.4
MS.gene48373.t1 MTR_4g097570 43.689 103 55 2 193 292 9 111 4.74e-22 96.3
MS.gene48373.t1 MTR_7g010210 42.056 107 61 1 196 301 12 118 5.35e-22 95.5
MS.gene48373.t1 MTR_8g017340 43.636 110 58 3 192 298 8 116 5.50e-22 98.6
MS.gene48373.t1 MTR_4g082230 41.964 112 62 2 192 301 8 118 7.07e-22 97.8
MS.gene48373.t1 MTR_1g062940 38.028 142 71 4 196 335 6 132 8.67e-22 93.6
MS.gene48373.t1 MTR_6g055910 28.467 274 168 7 198 452 16 280 8.70e-22 95.5
MS.gene48373.t1 MTR_0197s0010 47.368 95 47 2 201 293 6 99 1.12e-21 93.6
MS.gene48373.t1 MTR_6g012690 41.818 110 63 1 193 301 9 118 1.20e-21 96.3
MS.gene48373.t1 MTR_6g012180 44.444 99 54 1 196 293 12 110 1.26e-21 95.5
MS.gene48373.t1 MTR_0001s0360 39.450 109 65 1 196 303 7 115 1.37e-21 94.0
MS.gene48373.t1 MTR_3g039990 41.441 111 64 1 192 301 9 119 1.69e-21 95.1
MS.gene48373.t1 MTR_4g128670 45.631 103 54 2 193 293 9 111 1.72e-21 95.9
MS.gene48373.t1 MTR_8g017350 42.727 110 59 3 192 298 8 116 2.04e-21 97.4
MS.gene48373.t1 MTR_8g017390 42.308 104 56 3 198 298 14 116 2.57e-21 96.7
MS.gene48373.t1 MTR_7g102110 41.667 108 61 2 193 298 9 116 2.61e-21 93.6
MS.gene48373.t1 MTR_5g079220 38.333 120 72 2 185 302 9 128 2.66e-21 94.0
MS.gene48373.t1 MTR_5g078910 41.176 102 59 1 198 298 9 110 2.67e-21 94.4
MS.gene48373.t1 MTR_1g008970 60.811 74 28 1 221 293 113 186 2.98e-21 93.2
MS.gene48373.t1 MTR_1g086510 38.129 139 82 3 193 328 18 155 3.29e-21 93.2
MS.gene48373.t1 MTR_5g038910 41.593 113 61 2 189 299 20 129 3.46e-21 96.3
MS.gene48373.t1 MTR_4g097570 43.137 102 56 2 193 292 9 110 3.98e-21 93.6
MS.gene48373.t1 MTR_5g079120 40.870 115 65 2 186 298 51 164 4.93e-21 93.6
MS.gene48373.t1 MTR_7g017260 31.500 200 101 6 196 377 25 206 4.96e-21 92.8
MS.gene48373.t1 MTR_5g038910 41.593 113 61 2 189 299 20 129 5.24e-21 94.7
MS.gene48373.t1 MTR_5g078860 36.478 159 96 4 198 354 9 164 5.43e-21 93.6
MS.gene48373.t1 MTR_7g087130 41.441 111 64 1 192 301 8 118 5.92e-21 94.0
MS.gene48373.t1 MTR_1g083630 43.137 102 57 1 198 298 14 115 6.35e-21 95.9
MS.gene48373.t1 MTR_1g100667 40.952 105 61 1 198 301 15 119 6.80e-21 92.4
MS.gene48373.t1 MTR_5g078800 35.256 156 97 3 198 351 9 162 6.81e-21 92.4
MS.gene48373.t1 MTR_0247s0040 41.176 102 59 1 196 296 7 108 6.85e-21 90.1
MS.gene48373.t1 MTR_5g078950 39.216 102 61 1 196 296 7 108 1.00e-20 92.0
MS.gene48373.t1 MTR_0008s0280 42.268 97 55 1 198 293 14 110 1.27e-20 90.9
MS.gene48373.t1 MTR_2g096380 41.905 105 58 2 196 298 6 109 1.82e-20 90.5
MS.gene48373.t1 MTR_8g468380 40.816 98 58 0 201 298 25 122 2.27e-20 93.6
MS.gene48373.t1 MTR_2g067420 42.157 102 58 1 193 293 11 112 1.69e-19 89.7
MS.gene48373.t1 MTR_2g033170 39.815 108 64 1 198 304 26 133 1.79e-19 89.4
MS.gene48373.t1 MTR_8g060940 40.206 97 57 1 196 291 7 103 2.38e-19 87.4
MS.gene48373.t1 MTR_0193s0090 38.835 103 62 1 196 297 7 109 3.71e-19 85.9
MS.gene48373.t1 MTR_7g109320 36.686 169 104 3 192 357 8 176 4.37e-19 88.6
MS.gene48373.t1 MTR_5g078930 42.857 98 53 2 198 293 11 107 4.50e-19 86.3
MS.gene48373.t1 MTR_3g045430 33.333 117 77 1 186 301 3 119 1.28e-18 86.7
MS.gene48373.t1 MTR_4g123040 44.211 95 52 1 198 291 26 120 1.41e-18 86.7
MS.gene48373.t1 MTR_4g128190 40.777 103 48 3 196 297 11 101 3.84e-18 84.0
MS.gene48373.t1 MTR_1g085880 37.903 124 71 4 201 322 17 136 4.35e-18 82.8
MS.gene48373.t1 MTR_7g061550 40.196 102 58 1 200 298 9 110 1.02e-17 84.7
MS.gene48373.t1 MTR_1g085770 37.903 124 71 4 201 322 17 136 1.89e-17 83.2
MS.gene48373.t1 MTR_7g111290 51.613 62 30 0 231 292 6 67 3.85e-17 82.8
MS.gene48373.t1 MTR_4g063100 44.156 77 42 1 222 298 6 81 6.25e-17 80.1
MS.gene48373.t1 MTR_7g035300 38.835 103 51 3 200 302 78 168 3.78e-16 78.2
MS.gene48373.t1 MTR_6g055910 27.083 240 148 6 231 452 21 251 6.11e-16 77.8
MS.gene48373.t1 MTR_2g096380 42.647 68 39 0 231 298 23 90 4.90e-15 74.3
MS.gene48373.t1 MTR_6g080360 42.157 102 56 2 192 291 522 622 2.58e-14 75.9
MS.gene48373.t1 MTR_6g080360 36.458 96 60 1 196 291 477 571 6.91e-12 68.2
MS.gene48373.t1 MTR_6g080360 42.157 102 56 2 192 291 302 402 4.74e-14 75.1
MS.gene48373.t1 MTR_6g080360 36.458 96 60 1 196 291 257 351 1.43e-11 67.0
MS.gene48373.t1 MTR_5g007300 40.000 80 47 1 193 271 61 140 6.77e-14 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48373.t1 AT4G18770 53.455 275 105 8 144 405 157 421 7.19e-88 275
MS.gene48373.t1 AT3G27785 64.626 147 48 1 185 327 176 322 2.81e-59 201
MS.gene48373.t1 AT5G58850 61.871 139 40 2 196 321 103 241 3.55e-53 184
MS.gene48373.t1 AT5G40360 60.870 138 52 1 191 326 151 288 6.26e-53 182
MS.gene48373.t1 AT5G11050 59.060 149 41 3 196 326 103 249 6.73e-52 181
MS.gene48373.t1 AT3G09370 49.045 157 70 2 196 352 133 279 5.77e-42 155
MS.gene48373.t1 AT3G09370 49.045 157 70 2 196 352 141 287 7.55e-42 155
MS.gene48373.t1 AT3G09370 49.045 157 70 2 196 352 128 274 7.77e-42 155
MS.gene48373.t1 AT5G02320 62.136 103 39 0 196 298 125 227 3.05e-39 149
MS.gene48373.t1 AT5G02320 62.136 103 39 0 196 298 125 227 3.05e-39 149
MS.gene48373.t1 AT5G02320 62.136 103 39 0 196 298 65 167 3.62e-39 147
MS.gene48373.t1 AT5G11510 40.314 191 100 2 196 372 79 269 3.81e-39 150
MS.gene48373.t1 AT5G11510 40.761 184 95 2 196 365 79 262 5.29e-39 150
MS.gene48373.t1 AT5G11510 40.761 184 95 2 196 365 79 262 5.86e-39 150
MS.gene48373.t1 AT5G11510 40.761 184 95 2 196 365 79 262 5.86e-39 150
MS.gene48373.t1 AT5G11510 40.761 184 95 2 196 365 79 262 5.86e-39 150
MS.gene48373.t1 AT2G25230 48.872 133 68 0 192 324 20 152 9.80e-38 137
MS.gene48373.t1 AT4G32730 55.000 120 49 1 196 315 85 199 3.56e-37 145
MS.gene48373.t1 AT4G32730 55.000 120 49 1 196 315 85 199 3.56e-37 145
MS.gene48373.t1 AT4G32730 55.000 120 49 1 196 315 85 199 3.56e-37 145
MS.gene48373.t1 AT4G32730 55.000 120 49 1 196 315 85 199 3.56e-37 145
MS.gene48373.t1 AT4G32730 55.000 120 49 1 196 315 85 199 4.93e-37 144
MS.gene48373.t1 AT3G55730 47.482 139 71 1 197 333 55 193 2.41e-36 138
MS.gene48373.t1 AT5G40430 45.324 139 75 1 192 330 48 185 8.24e-35 130
MS.gene48373.t1 AT4G00540 59.434 106 40 1 196 298 101 206 5.24e-34 132
MS.gene48373.t1 AT4G00540 60.577 104 38 1 198 298 101 204 1.58e-33 131
MS.gene48373.t1 AT3G09230 55.340 103 46 0 197 299 54 156 7.41e-33 128
MS.gene48373.t1 AT2G23290 53.846 104 48 0 197 300 12 115 2.14e-32 125
MS.gene48373.t1 AT4G37260 51.923 104 50 0 197 300 12 115 2.51e-32 125
MS.gene48373.t1 AT3G50060 50.962 104 51 0 197 300 5 108 2.07e-31 122
MS.gene48373.t1 AT5G67300 48.039 102 53 0 197 298 5 106 4.78e-29 116
MS.gene48373.t1 AT2G39880 50.000 102 51 0 197 298 49 150 8.48e-29 117
MS.gene48373.t1 AT4G26930 46.667 105 55 1 194 297 17 121 1.69e-28 116
MS.gene48373.t1 AT2G32460 50.435 115 50 4 198 309 20 130 7.65e-28 115
MS.gene48373.t1 AT2G32460 50.435 115 50 4 198 309 8 118 7.72e-28 115
MS.gene48373.t1 AT3G11440 45.872 109 57 2 192 298 37 145 1.23e-27 115
MS.gene48373.t1 AT1G69560 42.149 121 70 0 183 303 108 228 1.35e-27 113
MS.gene48373.t1 AT5G55020 48.571 105 51 2 195 297 25 128 1.35e-27 115
MS.gene48373.t1 AT1G69560 42.149 121 70 0 183 303 92 212 1.48e-27 112
MS.gene48373.t1 AT3G29020 47.706 109 54 1 195 300 62 170 1.56e-27 110
MS.gene48373.t1 AT3G11440 45.872 109 57 2 192 298 37 145 3.19e-27 114
MS.gene48373.t1 AT3G11440 45.872 109 57 2 192 298 37 145 3.19e-27 114
MS.gene48373.t1 AT3G11440 45.872 109 57 2 192 298 37 145 3.19e-27 114
MS.gene48373.t1 AT5G14750 41.525 118 68 1 198 314 18 135 4.92e-27 107
MS.gene48373.t1 AT1G26780 45.000 120 64 1 195 314 95 212 5.18e-27 110
MS.gene48373.t1 AT3G29020 47.706 109 54 1 195 300 64 172 5.30e-27 110
MS.gene48373.t1 AT2G26950 47.009 117 52 3 190 301 11 122 5.74e-27 112
MS.gene48373.t1 AT1G26780 45.000 120 64 1 195 314 95 212 7.08e-27 111
MS.gene48373.t1 AT4G33450 48.598 107 55 0 192 298 13 119 7.64e-27 108
MS.gene48373.t1 AT1G22640 48.113 106 54 1 198 302 14 119 7.98e-27 108
MS.gene48373.t1 AT3G28470 47.059 102 53 1 193 293 9 110 1.43e-26 109
MS.gene48373.t1 AT4G28110 47.826 115 55 2 193 306 9 119 1.58e-26 108
MS.gene48373.t1 AT4G38620 49.533 107 51 2 198 302 14 119 2.23e-26 108
MS.gene48373.t1 AT1G17950 45.614 114 60 1 198 311 5 116 2.43e-26 107
MS.gene48373.t1 AT4G05100 45.299 117 63 1 186 301 3 119 2.67e-26 108
MS.gene48373.t1 AT5G40330 48.454 97 49 1 198 293 14 110 2.71e-26 106
MS.gene48373.t1 AT4G21440 46.296 108 57 1 192 298 8 115 5.79e-26 108
MS.gene48373.t1 AT1G74430 44.340 106 58 1 198 302 14 119 5.94e-26 107
MS.gene48373.t1 AT5G35550 42.373 118 67 1 185 301 3 120 6.54e-26 106
MS.gene48373.t1 AT4G09460 50.485 103 48 2 198 298 14 115 7.87e-26 105
MS.gene48373.t1 AT1G66230 45.946 111 57 2 193 301 9 118 9.87e-26 106
MS.gene48373.t1 AT3G27920 47.423 97 50 1 198 293 16 112 1.53e-25 104
MS.gene48373.t1 AT1G35515 36.875 160 90 4 198 352 14 167 1.57e-25 103
MS.gene48373.t1 AT4G12350 45.045 111 58 2 193 301 9 118 1.66e-25 105
MS.gene48373.t1 AT4G22680 45.946 111 57 2 193 301 9 118 2.47e-25 105
MS.gene48373.t1 AT1G57560 44.860 107 56 2 198 302 14 119 2.51e-25 106
MS.gene48373.t1 AT2G26960 48.113 106 54 1 193 297 17 122 2.54e-25 107
MS.gene48373.t1 AT1G57560 44.860 107 56 2 198 302 14 119 2.73e-25 105
MS.gene48373.t1 AT1G73410 46.903 113 56 1 198 310 6 114 3.26e-25 103
MS.gene48373.t1 AT3G61250 48.649 111 53 3 193 300 9 118 5.15e-25 104
MS.gene48373.t1 AT1G73410 49.533 107 51 1 198 301 6 112 6.76e-25 102
MS.gene48373.t1 AT3G12720 45.283 106 55 2 196 299 22 126 1.08e-24 103
MS.gene48373.t1 AT3G24310 48.148 108 49 3 198 303 20 122 1.28e-24 103
MS.gene48373.t1 AT5G26660 43.925 107 57 2 198 302 14 119 1.61e-24 104
MS.gene48373.t1 AT5G16770 46.154 104 55 1 196 298 12 115 1.72e-24 103
MS.gene48373.t1 AT5G16770 46.154 104 55 1 196 298 12 115 1.72e-24 103
MS.gene48373.t1 AT5G06100 44.762 105 56 2 196 298 32 136 2.03e-24 105
MS.gene48373.t1 AT5G12870 43.925 107 59 1 198 303 20 126 2.06e-24 102
MS.gene48373.t1 AT3G30210 51.042 96 44 2 198 291 29 123 2.09e-24 102
MS.gene48373.t1 AT4G37780 33.333 201 116 5 193 381 9 203 2.24e-24 103
MS.gene48373.t1 AT3G13540 37.288 118 73 1 182 298 9 126 2.30e-24 102
MS.gene48373.t1 AT5G54230 39.041 146 79 3 196 331 12 157 2.45e-24 103
MS.gene48373.t1 AT2G16720 48.113 106 53 2 198 301 14 119 2.54e-24 102
MS.gene48373.t1 AT1G63910 43.925 107 59 1 196 301 12 118 2.58e-24 104
MS.gene48373.t1 AT5G16770 46.154 104 55 1 196 298 12 115 2.71e-24 103
MS.gene48373.t1 AT5G16770 46.154 104 55 1 196 298 12 115 2.71e-24 103
MS.gene48373.t1 AT5G07690 48.485 99 50 1 196 293 12 110 3.05e-24 103
MS.gene48373.t1 AT4G34990 46.226 106 56 1 198 302 14 119 3.45e-24 102
MS.gene48373.t1 AT4G13480 43.333 120 65 2 198 315 8 126 3.69e-24 101
MS.gene48373.t1 AT5G56110 38.686 137 77 3 196 329 12 144 4.05e-24 102
MS.gene48373.t1 AT5G17800 42.017 119 69 0 195 313 90 208 5.01e-24 102
MS.gene48373.t1 AT3G01530 47.115 104 52 2 196 297 25 127 5.22e-24 99.8
MS.gene48373.t1 AT1G18570 42.982 114 64 1 190 302 7 120 5.51e-24 103
MS.gene48373.t1 AT5G06100 44.762 105 56 2 196 298 32 136 5.55e-24 105
MS.gene48373.t1 AT5G06100 44.762 105 56 2 196 298 32 136 5.55e-24 105
MS.gene48373.t1 AT5G06100 44.762 105 56 2 196 298 32 136 5.55e-24 105
MS.gene48373.t1 AT5G06100 44.762 105 56 2 196 298 32 136 5.55e-24 105
MS.gene48373.t1 AT2G47190 43.636 110 61 1 196 304 20 129 5.59e-24 101
MS.gene48373.t1 AT3G02940 47.059 102 53 1 198 298 14 115 6.28e-24 102
MS.gene48373.t1 AT5G61420 47.475 99 51 1 196 293 12 110 7.13e-24 102
MS.gene48373.t1 AT1G09540 35.669 157 79 3 198 352 14 150 7.85e-24 102
MS.gene48373.t1 AT3G02940 47.059 102 53 1 198 298 14 115 8.79e-24 102
MS.gene48373.t1 AT3G02940 47.059 102 53 1 198 298 14 115 8.79e-24 102
MS.gene48373.t1 AT5G10280 45.631 103 53 2 198 298 14 115 9.38e-24 102
MS.gene48373.t1 AT5G52600 42.453 106 60 1 189 293 5 110 9.77e-24 99.0
MS.gene48373.t1 AT1G68320 43.689 103 55 2 198 298 21 122 1.14e-23 100
MS.gene48373.t1 AT5G39700 39.394 132 77 1 172 303 33 161 1.24e-23 98.2
MS.gene48373.t1 AT5G60890 45.370 108 58 1 196 302 12 119 2.02e-23 100
MS.gene48373.t1 AT3G27810 44.037 109 59 2 196 303 20 127 2.08e-23 98.6
MS.gene48373.t1 AT5G65230 44.144 111 59 2 190 298 6 115 2.10e-23 100
MS.gene48373.t1 AT5G14340 43.119 109 59 2 193 299 21 128 2.12e-23 99.8
MS.gene48373.t1 AT3G48920 44.068 118 63 2 181 297 5 120 2.15e-23 99.4
MS.gene48373.t1 AT3G60460 45.614 114 59 3 186 297 2 114 2.16e-23 100
MS.gene48373.t1 AT3G01140 44.545 110 60 1 193 301 9 118 2.81e-23 100
MS.gene48373.t1 AT1G66370 40.870 115 59 2 198 307 10 120 3.04e-23 98.6
MS.gene48373.t1 AT3G62610 43.519 108 60 1 192 298 8 115 3.41e-23 100
MS.gene48373.t1 AT5G07700 47.423 97 50 1 198 293 14 110 3.46e-23 100
MS.gene48373.t1 AT5G07700 47.423 97 50 1 198 293 14 110 3.46e-23 100
MS.gene48373.t1 AT4G17785 43.810 105 56 2 196 298 13 116 3.71e-23 100
MS.gene48373.t1 AT3G01140 44.545 110 60 1 193 301 52 161 3.92e-23 101
MS.gene48373.t1 AT4G17785 43.810 105 56 2 196 298 13 116 4.33e-23 100
MS.gene48373.t1 AT5G16600 43.243 111 60 2 193 301 9 118 5.79e-23 99.8
MS.gene48373.t1 AT1G18710 40.566 106 62 1 198 302 14 119 6.07e-23 98.2
MS.gene48373.t1 AT5G15310 43.636 110 61 1 193 301 9 118 9.03e-23 99.0
MS.gene48373.t1 AT1G25340 43.137 102 57 1 198 298 20 121 9.36e-23 98.2
MS.gene48373.t1 AT5G15310 43.636 110 61 1 193 301 9 118 9.80e-23 99.0
MS.gene48373.t1 AT5G15310 43.636 110 61 1 193 301 9 118 1.21e-22 97.1
MS.gene48373.t1 AT3G13890 40.385 104 61 1 196 298 12 115 1.31e-22 99.0
MS.gene48373.t1 AT5G40350 44.762 105 56 2 196 299 17 120 2.01e-22 95.5
MS.gene48373.t1 AT5G59780 43.689 103 55 2 198 298 10 111 2.10e-22 95.9
MS.gene48373.t1 AT2G47460 41.667 108 62 1 192 298 8 115 2.16e-22 98.6
MS.gene48373.t1 AT3G46130 44.660 103 54 2 198 298 11 112 2.54e-22 96.3
MS.gene48373.t1 AT1G25340 42.574 101 54 1 198 298 20 116 3.16e-22 96.7
MS.gene48373.t1 AT4G01680 40.566 106 62 1 198 302 14 119 4.23e-22 97.4
MS.gene48373.t1 AT1G06180 44.737 114 58 3 192 301 8 120 4.52e-22 95.5
MS.gene48373.t1 AT3G13890 38.938 113 59 1 196 298 12 124 4.73e-22 97.8
MS.gene48373.t1 AT4G25560 41.905 105 60 1 198 301 12 116 4.94e-22 96.3
MS.gene48373.t1 AT4G01680 40.566 106 62 1 198 302 14 119 5.59e-22 95.1
MS.gene48373.t1 AT1G74080 44.340 106 58 1 198 302 14 119 5.84e-22 97.1
MS.gene48373.t1 AT5G62320 43.363 113 54 3 198 301 15 126 6.12e-22 95.1
MS.gene48373.t1 AT5G62470 40.000 110 66 0 192 301 8 117 6.20e-22 97.1
MS.gene48373.t1 AT1G25340 42.574 101 54 1 198 298 20 116 6.47e-22 96.3
MS.gene48373.t1 AT3G08500 43.137 102 57 1 198 298 32 133 7.44e-22 96.7
MS.gene48373.t1 AT5G49330 40.741 108 63 1 192 298 8 115 8.72e-22 96.7
MS.gene48373.t1 AT2G31180 41.964 112 62 2 192 301 8 118 1.05e-21 94.4
MS.gene48373.t1 AT3G23250 43.564 101 56 1 192 291 8 108 1.12e-21 95.1
MS.gene48373.t1 AT5G57620 41.071 112 64 2 193 302 9 120 1.17e-21 95.9
MS.gene48373.t1 AT1G56160 40.909 110 62 2 193 300 11 119 1.57e-21 94.7
MS.gene48373.t1 AT3G53200 42.727 110 60 2 191 298 4 112 1.84e-21 93.6
MS.gene48373.t1 AT1G48000 44.330 97 53 1 196 291 32 128 2.55e-21 93.2
MS.gene48373.t1 AT1G79180 38.983 118 71 1 193 309 11 128 3.33e-21 94.0
MS.gene48373.t1 AT1G34670 42.308 104 59 1 196 298 12 115 3.84e-21 95.1
MS.gene48373.t1 AT5G23000 42.593 108 60 2 193 298 9 116 5.05e-21 94.0
MS.gene48373.t1 AT1G16490 39.286 112 67 1 193 303 11 122 5.11e-21 92.8
MS.gene48373.t1 AT5G65790 38.281 128 76 3 193 318 9 135 8.76e-21 94.0
MS.gene48373.t1 AT3G47600 39.823 113 61 2 193 301 9 118 9.71e-21 93.2
MS.gene48373.t1 AT4G01680 38.136 118 60 2 198 302 14 131 9.80e-21 93.6
MS.gene48373.t1 AT1G74650 42.593 108 61 1 192 298 8 115 1.27e-20 92.8
MS.gene48373.t1 AT5G62470 39.640 111 66 1 192 301 8 118 2.03e-20 92.8
MS.gene48373.t1 AT1G14350 40.000 105 60 1 189 293 19 120 2.61e-20 93.2
MS.gene48373.t1 AT1G14350 40.000 105 60 1 189 293 19 120 2.61e-20 93.2
MS.gene48373.t1 AT1G08810 41.818 110 63 1 193 301 9 118 2.76e-20 90.9
MS.gene48373.t1 AT3G49690 41.667 108 61 2 193 298 9 116 3.62e-20 91.3
MS.gene48373.t1 AT5G49620 39.316 117 70 1 189 304 19 135 5.08e-20 90.9
MS.gene48373.t1 AT3G12820 41.071 112 63 2 193 302 11 121 5.30e-20 89.4
MS.gene48373.t1 AT3G28910 40.000 110 65 1 193 301 9 118 6.71e-20 90.9
MS.gene48373.t1 AT5G52260 41.509 106 59 2 198 301 14 118 2.36e-19 88.2
MS.gene48373.t1 AT2G02820 40.594 101 57 1 189 289 24 121 2.52e-19 89.4
MS.gene48373.t1 AT2G02820 39.048 105 61 1 189 293 24 125 3.39e-19 90.5
MS.gene48373.t1 AT2G02820 39.048 105 61 1 189 293 24 125 4.00e-19 90.1
MS.gene48373.t1 AT5G35550 50.704 71 35 0 231 301 53 123 4.43e-19 87.0
MS.gene48373.t1 AT5G26660 39.785 93 55 1 231 323 17 108 6.37e-19 87.8
MS.gene48373.t1 AT1G66380 40.351 114 66 2 198 310 10 122 8.62e-19 83.2
MS.gene48373.t1 AT5G14750 39.326 89 52 1 228 314 13 101 3.02e-18 82.4
MS.gene48373.t1 AT1G56650 44.330 97 53 1 198 293 10 106 3.16e-18 84.3
MS.gene48373.t1 AT3G06490 37.838 111 66 2 196 304 19 128 5.55e-18 85.1
MS.gene48373.t1 AT2G36890 39.815 108 63 2 193 298 9 116 1.11e-17 84.0
MS.gene48373.t1 AT1G66390 43.299 97 54 1 198 293 10 106 1.46e-17 82.4
MS.gene48373.t1 AT2G36890 39.815 108 63 2 193 298 50 157 1.93e-17 83.6
MS.gene48373.t1 AT3G27810 49.315 73 36 1 231 303 7 78 3.19e-17 79.7
MS.gene48373.t1 AT1G79180 31.126 151 70 2 193 309 11 161 5.45e-17 82.0
MS.gene48373.t1 AT3G18100 41.489 94 55 0 198 291 546 639 7.36e-17 84.0
MS.gene48373.t1 AT5G49620 35.115 131 70 2 189 304 19 149 7.70e-17 81.6
MS.gene48373.t1 AT3G53200 50.000 68 34 0 231 298 12 79 9.23e-17 79.3
MS.gene48373.t1 AT3G18100 41.489 94 55 0 198 291 498 591 1.13e-16 83.2
MS.gene48373.t1 AT3G18100 41.489 94 55 0 198 291 385 478 1.41e-16 82.8
MS.gene48373.t1 AT3G12820 48.611 72 37 0 231 302 2 73 1.73e-16 78.2
MS.gene48373.t1 AT3G18100 41.489 94 55 0 198 291 333 426 1.75e-16 82.4
MS.gene48373.t1 AT5G40350 50.725 69 33 1 231 299 8 75 2.32e-16 77.0
MS.gene48373.t1 AT5G59780 44.118 68 38 0 231 298 23 90 5.22e-16 77.4
MS.gene48373.t1 AT2G37630 39.216 102 59 1 200 298 6 107 5.90e-16 79.7
MS.gene48373.t1 AT3G46130 44.118 68 38 0 231 298 23 90 1.03e-15 77.0
MS.gene48373.t1 AT3G46130 44.118 68 38 0 231 298 13 80 1.07e-15 76.6
MS.gene48373.t1 AT1G22640 52.459 61 29 0 242 302 2 62 1.10e-15 75.9
MS.gene48373.t1 AT3G47600 42.169 83 46 1 231 311 42 124 6.83e-15 75.9
MS.gene48373.t1 AT1G71030 39.706 68 41 0 234 301 5 72 1.80e-13 68.9
MS.gene48373.t1 AT1G71030 39.706 68 41 0 234 301 19 86 2.00e-13 69.3
MS.gene48373.t1 AT1G66380 41.250 80 46 1 231 310 11 89 4.01e-13 65.9
MS.gene48373.t1 AT5G14750 35.616 73 47 0 242 314 2 74 4.96e-13 66.6
MS.gene48373.t1 AT5G14750 35.616 73 47 0 242 314 2 74 4.96e-13 66.6
MS.gene48373.t1 AT3G23250 52.000 50 24 0 242 291 2 51 6.25e-11 62.8

Find 70 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTTTCAGCCTTGGTTTC+AGG 0.147851 8.3:+17199468 None:intergenic
CCTTTATGTCAGGCCTTAAA+TGG 0.219692 8.3:+17198665 None:intergenic
AAAGATGGCATAACCATTTA+AGG 0.233635 8.3:-17198678 MS.gene48373:CDS
TCAAGTTGATGATTTCTTCT+AGG 0.238402 8.3:+17199173 None:intergenic
CACTGTTTCCCTATTCTTCC+AGG 0.238484 8.3:+17198706 None:intergenic
AAATCATCAACTTGATCTTA+TGG 0.263463 8.3:-17199165 MS.gene48373:CDS
CATATTGAAAATTGTCAATA+AGG 0.267649 8.3:+17199216 None:intergenic
CTTCGAACGACATGTTCTTT+TGG 0.279895 8.3:+17198191 None:intergenic
TTCTATTAAATCCAGCTCTT+TGG 0.295976 8.3:+17199036 None:intergenic
ATATATCAAGAGCCTGAATT+TGG 0.296321 8.3:-17198142 MS.gene48373:CDS
AGTTAAGAAGGAGTTGGATT+TGG 0.339487 8.3:-17197788 MS.gene48373:CDS
TGACAGGAATGAGCACTAAA+TGG 0.346280 8.3:+17199437 None:intergenic
CAGAAGTTACCTGGAAGAAT+AGG 0.346815 8.3:-17198715 MS.gene48373:CDS
TAAGAAGGAGTTGGATTTGG+TGG 0.356545 8.3:-17197785 MS.gene48373:CDS
ATTGCATTCTCAGTTCTTCC+TGG 0.357357 8.3:+17198252 None:intergenic
TGGTGGAACAACATGGAATA+AGG 0.358646 8.3:-17198756 MS.gene48373:CDS
AAATCATTGAACACATAGTT+TGG 0.381641 8.3:+17197979 None:intergenic
TTCCTATCTCTGTATGAGCT+TGG 0.382934 8.3:+17198304 None:intergenic
TTTGGCACTGAGCGGTCATT+AGG 0.385172 8.3:+17197997 None:intergenic
TTCTCTTTGTTGCATTCCAA+TGG 0.390029 8.3:+17198223 None:intergenic
CAAGTTGATGATTTCTTCTA+GGG 0.394455 8.3:+17199174 None:intergenic
CCATTTAAGGCCTGACATAA+AGG 0.397509 8.3:-17198665 MS.gene48373:intron
TTTAGCTCATCTTTCAGCCT+TGG 0.399678 8.3:+17199461 None:intergenic
ACAATCACAACCAATGCATT+TGG 0.420626 8.3:-17199501 MS.gene48373:CDS
TAATCTTGATGAGCATCAAT+TGG 0.428147 8.3:-17197824 MS.gene48373:CDS
ATCCAAGCTCATACAGAGAT+AGG 0.444813 8.3:-17198306 MS.gene48373:CDS
AGAAGTTACCTGGAAGAATA+GGG 0.448161 8.3:-17198714 MS.gene48373:CDS
TATGTCAAGTGTTCCTACTT+TGG 0.449961 8.3:-17197899 MS.gene48373:CDS
GCTCTTTGGTAATAATTTGT+CGG 0.454290 8.3:+17199050 None:intergenic
CATATTGCTCAGAAGTTACC+TGG 0.464115 8.3:-17198724 MS.gene48373:CDS
GGTTTCTGAAGGATTATTGA+AGG 0.465016 8.3:+17199121 None:intergenic
ACAAATTATTACCAAAGAGC+TGG 0.469591 8.3:-17199047 MS.gene48373:CDS
CTCAATGACTTGGTTTCTGA+AGG 0.472621 8.3:+17199110 None:intergenic
AATGGACAGTGGAAGAAGAT+AGG 0.483122 8.3:-17198941 MS.gene48373:intron
CTGGATTTAATAGAAACAAC+GGG 0.488021 8.3:-17199028 MS.gene48373:CDS
TCTTGCAGAAGAGTGCCTCT+TGG 0.490737 8.3:+17198165 None:intergenic
GCTTGAAGTTAAGAAGGAGT+TGG 0.495444 8.3:-17197794 MS.gene48373:CDS
CAATCATAGTGAAGGGGCAA+TGG 0.511552 8.3:-17198959 MS.gene48373:CDS
TTGTAAGAAATTACCATGAC+AGG 0.514825 8.3:+17199421 None:intergenic
ATGCTTGAAACTTCATCCTC+AGG 0.516133 8.3:+17199077 None:intergenic
GAACGAGCTTGAAGTTAAGA+AGG 0.521881 8.3:-17197800 MS.gene48373:CDS
TTAAATGCTCTTCTTGTCGT+AGG 0.523576 8.3:+17198996 None:intergenic
TTTAGTGCTCATTCCTGTCA+TGG 0.524413 8.3:-17199434 MS.gene48373:CDS
AAACAGATTGTTGAGTCAAA+TGG 0.530276 8.3:-17198776 MS.gene48373:intron
GATCAGTTTCATCATGTGCA+TGG 0.533505 8.3:-17199383 MS.gene48373:CDS
GAAGAAAACAATCATAGTGA+AGG 0.542551 8.3:-17198967 MS.gene48373:CDS
AAGAAAACAATCATAGTGAA+GGG 0.548416 8.3:-17198966 MS.gene48373:CDS
TTTGGTGGAGATGATCTCTC+AGG 0.555177 8.3:-17197770 MS.gene48373:CDS
ATACAGAGATAGGAAATAAG+TGG 0.556233 8.3:-17198296 MS.gene48373:CDS
TGATTTGCAATACGTGGCTG+AGG 0.559901 8.3:+17198027 None:intergenic
GGAAACAGTGCAGAGAAAGA+TGG 0.587948 8.3:-17198693 MS.gene48373:CDS
AGACATATGGACAGATGAAG+AGG 0.588670 8.3:-17198340 MS.gene48373:CDS
AGTCAAATGGTGGAACAACA+TGG 0.589895 8.3:-17198763 MS.gene48373:CDS
GCTGGATTTAATAGAAACAA+CGG 0.590269 8.3:-17199029 MS.gene48373:CDS
TACAACATAACTCAATGACT+TGG 0.593106 8.3:+17199100 None:intergenic
CAGATTGTTGAGTCAAATGG+TGG 0.594993 8.3:-17198773 MS.gene48373:CDS
AACAACATGGAATAAGGAAG+TGG 0.595874 8.3:-17198750 MS.gene48373:CDS
ATTGGAATGCAACAAAGAGA+AGG 0.604090 8.3:-17198221 MS.gene48373:CDS
CAAAATTGATTTGCAATACG+TGG 0.610096 8.3:+17198021 None:intergenic
TACAGAGATAGGAAATAAGT+GGG 0.612378 8.3:-17198295 MS.gene48373:CDS
AAGAAAACTACCTGAAACCA+AGG 0.625495 8.3:-17199478 MS.gene48373:CDS
ATGCATTGGTTGTGATTGTG+AGG 0.633671 8.3:+17199505 None:intergenic
AGAAAACAATCATAGTGAAG+GGG 0.635290 8.3:-17198965 MS.gene48373:CDS
AGTGAAGGGGCAATGGACAG+TGG 0.641499 8.3:-17198952 MS.gene48373:CDS
TGCATTGGTTGTGATTGTGA+GGG 0.667078 8.3:+17199506 None:intergenic
ATTGAGTTATGTTGTACCTG+AGG 0.678128 8.3:-17199093 MS.gene48373:CDS
TGGCTGAGGAAGCTGTGCTG+CGG 0.683231 8.3:+17198041 None:intergenic
ACACATAGTTTGGCACTGAG+CGG 0.695454 8.3:+17197989 None:intergenic
AATTTGTTTGAAGAAGAGTG+TGG 0.705506 8.3:-17197943 MS.gene48373:CDS
TGTCGTTCGAAGTATCCAAG+AGG 0.712598 8.3:-17198180 MS.gene48373:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAACAAAAATTCAAATAT+TGG + chr8.3:17198754-17198773 None:intergenic 15.0%
!!! TATAAGGTAATATTTTAACT+TGG - chr8.3:17198785-17198804 MS.gene48373:intron 15.0%
!! CATATTGAAAATTGTCAATA+AGG + chr8.3:17198076-17198095 None:intergenic 20.0%
!! GAATTGAAGTTTAATATAGA+AGG + chr8.3:17198913-17198932 None:intergenic 20.0%
!! TATTGAAGGAAAAATAACTA+TGG + chr8.3:17198157-17198176 None:intergenic 20.0%
!! TTTCTCTTAACTTTCATATA+AGG - chr8.3:17198769-17198788 MS.gene48373:CDS 20.0%
!!! ATTGACAATTTTCAATATGA+TGG - chr8.3:17198077-17198096 MS.gene48373:CDS 20.0%
!!! TTTCAAGTTTTTGCATATTT+TGG - chr8.3:17198446-17198465 MS.gene48373:intron 20.0%
! AAAAATGAAACCTTTATGTC+AGG + chr8.3:17198637-17198656 None:intergenic 25.0%
! AAATCATCAACTTGATCTTA+TGG - chr8.3:17198124-17198143 MS.gene48373:CDS 25.0%
! AAATCATTGAACACATAGTT+TGG + chr8.3:17199313-17199332 None:intergenic 25.0%
! AAGAAAACAATCATAGTGAA+GGG - chr8.3:17198323-17198342 MS.gene48373:CDS 25.0%
! AGAATGCAATAAAAAACCAT+TGG - chr8.3:17199050-17199069 MS.gene48373:CDS 25.0%
! ATATAGAAGGAAAATTCGTA+TGG + chr8.3:17198900-17198919 None:intergenic 25.0%
! ATTTATTCTATATACGTGTG+TGG + chr8.3:17198664-17198683 None:intergenic 25.0%
!! ACTCAAAACTTTGATCTTTT+TGG - chr8.3:17197963-17197982 MS.gene48373:CDS 25.0%
!! TGTGTTCAATGATTTTTCTT+TGG - chr8.3:17199318-17199337 MS.gene48373:CDS 25.0%
!!! AAAGATCAAAGTTTTGAGTT+TGG + chr8.3:17197962-17197981 None:intergenic 25.0%
!!! AATTCTTTTTCATCCAAAGT+AGG + chr8.3:17199406-17199425 None:intergenic 25.0%
!!! AGAGATTTTGATGTTTATGA+TGG - chr8.3:17198005-17198024 MS.gene48373:CDS 25.0%
AAACAGATTGTTGAGTCAAA+TGG - chr8.3:17198513-17198532 MS.gene48373:intron 30.0%
AAAGATGGCATAACCATTTA+AGG - chr8.3:17198611-17198630 MS.gene48373:intron 30.0%
ACAAATTATTACCAAAGAGC+TGG - chr8.3:17198242-17198261 MS.gene48373:CDS 30.0%
AGAAAACAATCATAGTGAAG+GGG - chr8.3:17198324-17198343 MS.gene48373:CDS 30.0%
ATACAGAGATAGGAAATAAG+TGG - chr8.3:17198993-17199012 MS.gene48373:CDS 30.0%
ATATATCAAGAGCCTGAATT+TGG - chr8.3:17199147-17199166 MS.gene48373:CDS 30.0%
CTGGATTTAATAGAAACAAC+GGG - chr8.3:17198261-17198280 MS.gene48373:CDS 30.0%
GAAGAAAACAATCATAGTGA+AGG - chr8.3:17198322-17198341 MS.gene48373:CDS 30.0%
GCTGGATTTAATAGAAACAA+CGG - chr8.3:17198260-17198279 MS.gene48373:CDS 30.0%
TAATCTTGATGAGCATCAAT+TGG - chr8.3:17199465-17199484 MS.gene48373:CDS 30.0%
TACAACATAACTCAATGACT+TGG + chr8.3:17198192-17198211 None:intergenic 30.0%
TACAGAGATAGGAAATAAGT+GGG - chr8.3:17198994-17199013 MS.gene48373:CDS 30.0%
TTCTATTAAATCCAGCTCTT+TGG + chr8.3:17198256-17198275 None:intergenic 30.0%
TTGTAAGAAATTACCATGAC+AGG + chr8.3:17197871-17197890 None:intergenic 30.0%
! AATTTGTTTGAAGAAGAGTG+TGG - chr8.3:17199346-17199365 MS.gene48373:CDS 30.0%
! CATTTTTGCAGAAAGACATA+TGG - chr8.3:17198936-17198955 MS.gene48373:intron 30.0%
! GCTACAAGTAATCTTTTTCT+TGG + chr8.3:17199218-17199237 None:intergenic 30.0%
! GCTCTTTGGTAATAATTTGT+CGG + chr8.3:17198242-17198261 None:intergenic 30.0%
! TAGTTTTCTTCCAAATGCAT+TGG + chr8.3:17197801-17197820 None:intergenic 30.0%
! TCTTTTGCTGAGAATAATAG+TGG - chr8.3:17198032-17198051 MS.gene48373:CDS 30.0%
!! CAAAATTGATTTGCAATACG+TGG + chr8.3:17199271-17199290 None:intergenic 30.0%
!! CAAGTTGATGATTTCTTCTA+GGG + chr8.3:17198118-17198137 None:intergenic 30.0%
!! TCAAGTTGATGATTTCTTCT+AGG + chr8.3:17198119-17198138 None:intergenic 30.0%
!!! GATCTTTTTTGAAAGTCTCT+TGG + chr8.3:17199184-17199203 None:intergenic 30.0%
AACAACATGGAATAAGGAAG+TGG - chr8.3:17198539-17198558 MS.gene48373:intron 35.0%
AAGAAAACTACCTGAAACCA+AGG - chr8.3:17197811-17197830 MS.gene48373:CDS 35.0%
ACAATCACAACCAATGCATT+TGG - chr8.3:17197788-17197807 MS.gene48373:CDS 35.0%
AGAAGTTACCTGGAAGAATA+GGG - chr8.3:17198575-17198594 MS.gene48373:intron 35.0%
AGTTAAGAAGGAGTTGGATT+TGG - chr8.3:17199501-17199520 MS.gene48373:CDS 35.0%
ATTGAGTTATGTTGTACCTG+AGG - chr8.3:17198196-17198215 MS.gene48373:CDS 35.0%
ATTGGAATGCAACAAAGAGA+AGG - chr8.3:17199068-17199087 MS.gene48373:CDS 35.0%
TATGTCAAGTGTTCCTACTT+TGG - chr8.3:17199390-17199409 MS.gene48373:CDS 35.0%
TTAAATGCTCTTCTTGTCGT+AGG + chr8.3:17198296-17198315 None:intergenic 35.0%
TTCTCTTTGTTGCATTCCAA+TGG + chr8.3:17199069-17199088 None:intergenic 35.0%
! ATCCTCCAATCAAGTTTTTG+GGG - chr8.3:17197935-17197954 MS.gene48373:CDS 35.0%
! CATCCTCCAATCAAGTTTTT+GGG - chr8.3:17197934-17197953 MS.gene48373:CDS 35.0%
! GGTTTCTGAAGGATTATTGA+AGG + chr8.3:17198171-17198190 None:intergenic 35.0%
! TCATCCTCCAATCAAGTTTT+TGG - chr8.3:17197933-17197952 MS.gene48373:CDS 35.0%
!!! CTTTTTGGTAATGCAGAATG+TGG - chr8.3:17197978-17197997 MS.gene48373:CDS 35.0%
!!! CTTTTTTGAAAGTCTCTTGG+CGG + chr8.3:17199181-17199200 None:intergenic 35.0%
!!! TTTTTTGAAAGTCTCTTGGC+GGG + chr8.3:17199180-17199199 None:intergenic 35.0%
AATGGACAGTGGAAGAAGAT+AGG - chr8.3:17198348-17198367 MS.gene48373:intron 40.0%
AGACATATGGACAGATGAAG+AGG - chr8.3:17198949-17198968 MS.gene48373:CDS 40.0%
ATCCAAGCTCATACAGAGAT+AGG - chr8.3:17198983-17199002 MS.gene48373:CDS 40.0%
ATGCTTGAAACTTCATCCTC+AGG + chr8.3:17198215-17198234 None:intergenic 40.0%
ATTGCATTCTCAGTTCTTCC+TGG + chr8.3:17199040-17199059 None:intergenic 40.0%
CAGAAGTTACCTGGAAGAAT+AGG - chr8.3:17198574-17198593 MS.gene48373:intron 40.0%
CAGATTGTTGAGTCAAATGG+TGG - chr8.3:17198516-17198535 MS.gene48373:intron 40.0%
CATATTGCTCAGAAGTTACC+TGG - chr8.3:17198565-17198584 MS.gene48373:intron 40.0%
CCTTTATGTCAGGCCTTAAA+TGG + chr8.3:17198627-17198646 None:intergenic 40.0%
GAACGAGCTTGAAGTTAAGA+AGG - chr8.3:17199489-17199508 MS.gene48373:CDS 40.0%
GAGATTGCAAAAAGATTGCC+AGG - chr8.3:17199019-17199038 MS.gene48373:CDS 40.0%
GATCAGTTTCATCATGTGCA+TGG - chr8.3:17197906-17197925 MS.gene48373:CDS 40.0%
GCTTGAAGTTAAGAAGGAGT+TGG - chr8.3:17199495-17199514 MS.gene48373:CDS 40.0%
TAAGAAGGAGTTGGATTTGG+TGG - chr8.3:17199504-17199523 MS.gene48373:CDS 40.0%
TGACAGGAATGAGCACTAAA+TGG + chr8.3:17197855-17197874 None:intergenic 40.0%
TGGTGGAACAACATGGAATA+AGG - chr8.3:17198533-17198552 MS.gene48373:intron 40.0%
TTCCTATCTCTGTATGAGCT+TGG + chr8.3:17198988-17199007 None:intergenic 40.0%
TTGGACCCCAAAAACTTGAT+TGG + chr8.3:17197943-17197962 None:intergenic 40.0%
TTTAGTGCTCATTCCTGTCA+TGG - chr8.3:17197855-17197874 MS.gene48373:CDS 40.0%
! AGTCAAATGGTGGAACAACA+TGG - chr8.3:17198526-17198545 MS.gene48373:intron 40.0%
! CCATTTAAGGCCTGACATAA+AGG - chr8.3:17198624-17198643 MS.gene48373:intron 40.0%
! CTTCGAACGACATGTTCTTT+TGG + chr8.3:17199101-17199120 None:intergenic 40.0%
! TTTAGCTCATCTTTCAGCCT+TGG + chr8.3:17197831-17197850 None:intergenic 40.0%
!! ATGCATTGGTTGTGATTGTG+AGG + chr8.3:17197787-17197806 None:intergenic 40.0%
!! CTCAATGACTTGGTTTCTGA+AGG + chr8.3:17198182-17198201 None:intergenic 40.0%
!! TGCATTGGTTGTGATTGTGA+GGG + chr8.3:17197786-17197805 None:intergenic 40.0%
CAATCATAGTGAAGGGGCAA+TGG - chr8.3:17198330-17198349 MS.gene48373:CDS 45.0%
CACTGTTTCCCTATTCTTCC+AGG + chr8.3:17198586-17198605 None:intergenic 45.0%
CATCTTTCAGCCTTGGTTTC+AGG + chr8.3:17197824-17197843 None:intergenic 45.0%
GACCCCAAAAACTTGATTGG+AGG + chr8.3:17197940-17197959 None:intergenic 45.0%
GGAAACAGTGCAGAGAAAGA+TGG - chr8.3:17198596-17198615 MS.gene48373:intron 45.0%
TTTGGTGGAGATGATCTCTC+AGG - chr8.3:17199519-17199538 MS.gene48373:CDS 45.0%
! ACACATAGTTTGGCACTGAG+CGG + chr8.3:17199303-17199322 None:intergenic 45.0%
! TGATTTGCAATACGTGGCTG+AGG + chr8.3:17199265-17199284 None:intergenic 45.0%
! TGTCGTTCGAAGTATCCAAG+AGG - chr8.3:17199109-17199128 MS.gene48373:CDS 45.0%
!! GCGGGTTTTGATCCAAATTC+AGG + chr8.3:17199162-17199181 None:intergenic 45.0%
! TTTGGCACTGAGCGGTCATT+AGG + chr8.3:17199295-17199314 None:intergenic 50.0%
!! TCTTGCAGAAGAGTGCCTCT+TGG + chr8.3:17199127-17199146 None:intergenic 50.0%
AGTGAAGGGGCAATGGACAG+TGG - chr8.3:17198337-17198356 MS.gene48373:CDS 55.0%
TGGCTGAGGAAGCTGTGCTG+CGG + chr8.3:17199251-17199270 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 17197750 17199561 17197750 ID=MS.gene48373
chr8.3 mRNA 17197750 17199561 17197750 ID=MS.gene48373.t1;Parent=MS.gene48373
chr8.3 exon 17198942 17199561 17198942 ID=MS.gene48373.t1.exon1;Parent=MS.gene48373.t1
chr8.3 CDS 17198942 17199561 17198942 ID=cds.MS.gene48373.t1;Parent=MS.gene48373.t1
chr8.3 exon 17198666 17198792 17198666 ID=MS.gene48373.t1.exon2;Parent=MS.gene48373.t1
chr8.3 CDS 17198666 17198792 17198666 ID=cds.MS.gene48373.t1;Parent=MS.gene48373.t1
chr8.3 exon 17197750 17198364 17197750 ID=MS.gene48373.t1.exon3;Parent=MS.gene48373.t1
chr8.3 CDS 17197750 17198364 17197750 ID=cds.MS.gene48373.t1;Parent=MS.gene48373.t1
Gene Sequence

>MS.gene48373

ATGGTTTTCGACACAAATCTCAGAGAAAACTATCCCTCACAATCACAACCAATGCATTTGGAAGAAAACTACCTGAAACCAAGGCTGAAAGATGAGCTAAATCCATTTAGTGCTCATTCCTGTCATGGTAATTTCTTACAAGATTTTCAGCATATTGATCAGTTTCATCATGTGCATGGATCATCATCCTCCAATCAAGTTTTTGGGGTCCAAACTCAAAACTTTGATCTTTTTGGTAATGCAGAATGTGGAAATAGAGATTTTGATGTTTATGATGGAAAGTCTTTTGCTGAGAATAATAGTGGTAGCGAGCATGCTCATAACCTTATTGACAATTTTCAATATGATGGTTTTAGTTTGAATATCCCTAGAAGAAATCATCAACTTGATCTTATGGTTGAAAACCATAGTTATTTTTCCTTCAATAATCCTTCAGAAACCAAGTCATTGAGTTATGTTGTACCTGAGGATGAAGTTTCAAGCATTGCACCGACAAATTATTACCAAAGAGCTGGATTTAATAGAAACAACGGGTTGTTATCTCCTACGACAAGAAGAGCATTTAAAGCGAAGAAGAAAACAATCATAGTGAAGGGGCAATGGACAGTGGAAGAAGATAGGTGCATAAATTTCTTTAAAACTTCTTGTTTACATAACTATATAATTAAGCTTGTTACATAATTTTTTTCATCACATTTTCAAGTTTTTGCATATTTTGGTTTTAATATAAAACACATATGTGCTTTGATTTAAATGCTTCTGCAAACAGATTGTTGAGTCAAATGGTGGAACAACATGGAATAAGGAAGTGGTCTCATATTGCTCAGAAGTTACCTGGAAGAATAGGGAAACAGTGCAGAGAAAGATGGCATAACCATTTAAGGCCTGACATAAAGGTTTCATTTTTTTTTCCACACACGTATATAGAATAAATTAATAGATACACACACTTTAGACAACTGAGTCTATACATACAATGTCATCAATGATAAATGCATGATCCAATATTTGAATTTTTGTTTCTCTTAACTTTCATATAAGGTAATATTTTAACTTGGTATGCATACTTTTTTTTGTCTTACAATTAACTAATTAAGTATCTCTATATTCTCACAAAGAGTTCGATGATTGCATGACACAAATTTATCCATACGAATTTTCCTTCTATATTAAACTTCAATTCGCGCATTTTTGCAGAAAGACATATGGACAGATGAAGAGGATAAGATATTGATCCAAGCTCATACAGAGATAGGAAATAAGTGGGCAGAGATTGCAAAAAGATTGCCAGGAAGAACTGAGAATGCAATAAAAAACCATTGGAATGCAACAAAGAGAAGGCAATATTCCAAAAGAACATGTCGTTCGAAGTATCCAAGAGGCACTCTTCTGCAAGAATATATCAAGAGCCTGAATTTGGATCAAAACCCGCCAAGAGACTTTCAAAAAAGATCTTCTGTTAAAGCCAAGAAAAAGATTACTTGTAGCACAAGCAAAGCCGCAGCACAGCTTCCTCAGCCACGTATTGCAAATCAATTTTGTCCTAATGACCGCTCAGTGCCAAACTATGTGTTCAATGATTTTTCTTTGGATGATAATTTGTTTGAAGAAGAGTGTGGTATTGATTCTCTGCTAGATGATATGTCAAGTGTTCCTACTTTGGATGAAAAAGAATTTGATGAAAAAGAATGTGATAAGAGAAGCATGCAAGTTGTTAATCTTGATGAGCATCAATTGGAGAACGAGCTTGAAGTTAAGAAGGAGTTGGATTTGGTGGAGATGATCTCTCAGGCTAATCAAAATATTAATTGA
Protein sequence

>MS.gene48373.t1

MVFDTNLRENYPSQSQPMHLEENYLKPRLKDELNPFSAHSCHGNFLQDFQHIDQFHHVHGSSSSNQVFGVQTQNFDLFGNAECGNRDFDVYDGKSFAENNSGSEHAHNLIDNFQYDGFSLNIPRRNHQLDLMVENHSYFSFNNPSETKSLSYVVPEDEVSSIAPTNYYQRAGFNRNNGLLSPTTRRAFKAKKKTIIVKGQWTVEEDRLLSQMVEQHGIRKWSHIAQKLPGRIGKQCRERWHNHLRPDIKKDIWTDEEDKILIQAHTEIGNKWAEIAKRLPGRTENAIKNHWNATKRRQYSKRTCRSKYPRGTLLQEYIKSLNLDQNPPRDFQKRSSVKAKKKITCSTSKAAAQLPQPRIANQFCPNDRSVPNYVFNDFSLDDNLFEEECGIDSLLDDMSSVPTLDEKEFDEKECDKRSMQVVNLDEHQLENELEVKKELDLVEMISQANQNIN