Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48596.t1 | RHN72439.1 | 37.5 | 677 | 165 | 4 | 173 | 591 | 58 | 734 | 1.20E-112 | 417.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48596.t1 | Q9SZL8 | 31.7 | 202 | 108 | 5 | 194 | 367 | 77 | 276 | 3.9e-16 | 88.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48596.t1 | A0A396J342 | 37.5 | 677 | 165 | 4 | 173 | 591 | 58 | 734 | 8.4e-113 | 417.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene48596.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48596.t1 | MTR_7g446520 | 53.959 | 341 | 53 | 4 | 57 | 371 | 15 | 277 | 2.65e-104 | 321 |
| MS.gene48596.t1 | MTR_7g028855 | 60.450 | 311 | 51 | 5 | 1 | 310 | 1 | 240 | 3.93e-104 | 325 |
| MS.gene48596.t1 | MTR_7g446480 | 44.474 | 371 | 105 | 7 | 1 | 371 | 1 | 270 | 1.94e-79 | 256 |
| MS.gene48596.t1 | MTR_7g446510 | 72.321 | 112 | 29 | 1 | 403 | 514 | 48 | 157 | 2.60e-44 | 162 |
| MS.gene48596.t1 | MTR_7g446510 | 64.122 | 131 | 21 | 1 | 267 | 371 | 155 | 285 | 2.47e-43 | 159 |
| MS.gene48596.t1 | MTR_1g070355 | 32.843 | 204 | 109 | 2 | 192 | 369 | 76 | 277 | 3.64e-25 | 110 |
| MS.gene48596.t1 | MTR_8g467420 | 42.056 | 107 | 60 | 2 | 173 | 278 | 61 | 166 | 1.30e-19 | 87.0 |
| MS.gene48596.t1 | MTR_5g076070 | 26.587 | 252 | 149 | 5 | 147 | 371 | 16 | 258 | 2.89e-19 | 89.0 |
| MS.gene48596.t1 | MTR_8g468460 | 48.913 | 92 | 45 | 2 | 369 | 459 | 15 | 105 | 3.23e-17 | 78.2 |
| MS.gene48596.t1 | MTR_3g448650 | 41.250 | 80 | 47 | 0 | 186 | 265 | 78 | 157 | 1.02e-12 | 67.4 |
| MS.gene48596.t1 | MTR_6g053140 | 29.341 | 167 | 94 | 3 | 117 | 283 | 47 | 189 | 1.45e-12 | 67.8 |
| MS.gene48596.t1 | MTR_2g098880 | 40.367 | 109 | 63 | 2 | 184 | 291 | 55 | 162 | 1.67e-12 | 68.6 |
| MS.gene48596.t1 | MTR_2g098880 | 40.367 | 109 | 63 | 2 | 184 | 291 | 67 | 174 | 2.22e-12 | 68.2 |
| MS.gene48596.t1 | MTR_0060s0090 | 37.500 | 80 | 50 | 0 | 193 | 272 | 59 | 138 | 3.36e-12 | 65.5 |
| MS.gene48596.t1 | MTR_3g080590 | 50.000 | 58 | 29 | 0 | 183 | 240 | 98 | 155 | 2.03e-11 | 63.2 |
| MS.gene48596.t1 | MTR_1g052260 | 34.021 | 97 | 62 | 1 | 178 | 272 | 62 | 158 | 4.78e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48596.t1 | AT4G38180 | 31.683 | 202 | 108 | 5 | 194 | 367 | 77 | 276 | 1.56e-13 | 74.7 |
| MS.gene48596.t1 | AT3G22170 | 27.239 | 268 | 174 | 8 | 134 | 382 | 10 | 275 | 3.97e-12 | 70.1 |
| MS.gene48596.t1 | AT3G22170 | 27.239 | 268 | 174 | 8 | 134 | 382 | 10 | 275 | 3.97e-12 | 70.1 |
| MS.gene48596.t1 | AT3G07500 | 35.032 | 157 | 87 | 6 | 163 | 316 | 8 | 152 | 1.06e-11 | 65.5 |
Find 118 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGACTTTACGGATTT+TGG | 0.057115 | 4.1:+66830354 | MS.gene48596:CDS |
| TGTTCATTACAGACCCAAAA+AGG | 0.258968 | 4.1:+66831151 | MS.gene48596:CDS |
| TGCATTTACACCCTGTTTAT+CGG | 0.264525 | 4.1:+66831237 | MS.gene48596:CDS |
| CCTGAAGTTCCAATTGTTAC+TGG | 0.294336 | 4.1:+66832758 | MS.gene48596:CDS |
| ATCCTTCTCCCACGTCTCTT+TGG | 0.296957 | 4.1:-66832964 | None:intergenic |
| TTTGTTGCGTTGGACGAAAA+AGG | 0.308114 | 4.1:+66832553 | MS.gene48596:CDS |
| TTGCAGGGAAGTGTCCAAAA+AGG | 0.313369 | 4.1:+66832676 | MS.gene48596:CDS |
| AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 4.1:+66830585 | MS.gene48596:CDS |
| CATTAACTGCTGAAGGAATA+AGG | 0.318241 | 4.1:+66830895 | MS.gene48596:CDS |
| TGCTGAAGGAATAAGGAAAA+TGG | 0.318497 | 4.1:+66830902 | MS.gene48596:CDS |
| CCAGTAACAATTGGAACTTC+AGG | 0.318979 | 4.1:-66832758 | None:intergenic |
| AAACAACAACAATGACTTTA+CGG | 0.325210 | 4.1:+66830347 | MS.gene48596:CDS |
| CCTTGGTTGGAGTAGGTTCA+TGG | 0.334650 | 4.1:-66831211 | None:intergenic |
| CTGTTAGGAAGAGTGATATT+AGG | 0.340554 | 4.1:+66830988 | MS.gene48596:CDS |
| CGCAACAAAATCAAACATTC+TGG | 0.341835 | 4.1:-66832539 | None:intergenic |
| CCCACGTCTCTTTGGCTATC+GGG | 0.373225 | 4.1:-66832956 | None:intergenic |
| TTGATAGAGATTGCTCGATA+TGG | 0.396982 | 4.1:+66832626 | MS.gene48596:CDS |
| GTTGAGTTTCCAGTAACAAT+TGG | 0.399158 | 4.1:-66832767 | None:intergenic |
| TCCCACGTCTCTTTGGCTAT+CGG | 0.401616 | 4.1:-66832957 | None:intergenic |
| GATATTAGGCGCAATGTTAA+CGG | 0.403530 | 4.1:+66831002 | MS.gene48596:CDS |
| GATTATAGTACTAGTGATAA+AGG | 0.406426 | 4.1:+66830609 | MS.gene48596:CDS |
| GGTACACCGGAACATGATTA+CGG | 0.407134 | 4.1:+66830375 | MS.gene48596:CDS |
| TGCTCCAAAGAAGAAGAAAA+AGG | 0.408279 | 4.1:+66832832 | MS.gene48596:CDS |
| AGCATTTATCAAGGTTAGAT+AGG | 0.409294 | 4.1:+66831078 | MS.gene48596:CDS |
| GGATGACATACAAAAGCTTC+AGG | 0.411801 | 4.1:+66832721 | MS.gene48596:CDS |
| GGAGCACCTTTGCACTTCAC+TGG | 0.435097 | 4.1:-66832815 | None:intergenic |
| CAGTAACAATTGGAACTTCA+GGG | 0.439435 | 4.1:-66832757 | None:intergenic |
| CGAGGCTGCTGAAATCTATA+CGG | 0.448201 | 4.1:+66832270 | MS.gene48596:CDS |
| TTCTTAGTGAACCCAACATC+AGG | 0.452847 | 4.1:-66831362 | None:intergenic |
| GAAACATATCTGATCATTGT+TGG | 0.455599 | 4.1:+66830423 | MS.gene48596:CDS |
| TATAAGTACGGTAAGTGTAA+AGG | 0.460291 | 4.1:+66830960 | MS.gene48596:CDS |
| TAATGAACACAGAGCCTAGC+TGG | 0.467107 | 4.1:-66831137 | None:intergenic |
| GATGAGCGATATGATGAAAC+TGG | 0.468588 | 4.1:+66830552 | MS.gene48596:CDS |
| TTCTTGAATGTGAACTATTG+TGG | 0.474071 | 4.1:+66832587 | MS.gene48596:CDS |
| TAGCTAGCATGCTGAGACAT+GGG | 0.474549 | 4.1:-66833148 | None:intergenic |
| TTGGCTATCGGGCTGAGACA+TGG | 0.475904 | 4.1:-66832945 | None:intergenic |
| CAGCACAGGGGATGAAAACC+TGG | 0.488423 | 4.1:-66832221 | None:intergenic |
| TCTTGAATGTGAACTATTGT+GGG | 0.488868 | 4.1:+66832588 | MS.gene48596:CDS |
| AAACATATCTGATCATTGTT+GGG | 0.490423 | 4.1:+66830424 | MS.gene48596:CDS |
| CGCAGATGAGTTGTCAGCAC+AGG | 0.491267 | 4.1:-66832235 | None:intergenic |
| GTAGAACCGTAATCATGTTC+CGG | 0.492886 | 4.1:-66830381 | None:intergenic |
| AGACGTGGGAGAAGGATCAA+AGG | 0.494945 | 4.1:+66832970 | MS.gene48596:CDS |
| GAGCGAAGAAGCATTTATCA+AGG | 0.496128 | 4.1:+66831069 | MS.gene48596:CDS |
| TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 4.1:+66830860 | MS.gene48596:CDS |
| TGGCTATCGGGCTGAGACAT+GGG | 0.505485 | 4.1:-66832944 | None:intergenic |
| GAAGATGATGATGTAGTTGT+TGG | 0.505754 | 4.1:+66830849 | MS.gene48596:CDS |
| CCTTTGCACTTCACTGGCAA+TGG | 0.506348 | 4.1:-66832809 | None:intergenic |
| GTGAAAGAAGAGATTATGAA+AGG | 0.507624 | 4.1:+66832310 | MS.gene48596:CDS |
| AGGGTGGATATCCTGATGTT+GGG | 0.508050 | 4.1:+66831351 | MS.gene48596:CDS |
| GCAGTATGTATGCATCAAGC+AGG | 0.510108 | 4.1:+66831040 | MS.gene48596:CDS |
| AAGAATACTCAAGGGAATAC+AGG | 0.512005 | 4.1:+66830528 | MS.gene48596:CDS |
| TGGCTATCAGGCTGAGACAT+GGG | 0.512749 | 4.1:-66833046 | None:intergenic |
| AGTGGCAGAATATTCACAAA+AGG | 0.514210 | 4.1:-66831492 | None:intergenic |
| ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 4.1:+66830888 | MS.gene48596:CDS |
| AAGGGTGGATATCCTGATGT+TGG | 0.521172 | 4.1:+66831350 | MS.gene48596:CDS |
| TGAGACATGGGCACAGAAAG+AGG | 0.521366 | 4.1:-66832932 | None:intergenic |
| AGTGATAAAGGTGAAGATGA+TGG | 0.524617 | 4.1:+66830621 | MS.gene48596:CDS |
| GACGTGGGAGAAGGATCAAA+GGG | 0.526228 | 4.1:+66832971 | MS.gene48596:CDS |
| GATGAAAGTCAAGGTGTTGA+AGG | 0.526322 | 4.1:+66830654 | MS.gene48596:CDS |
| TGATTACGGTTCTACGAATG+TGG | 0.542296 | 4.1:+66830389 | MS.gene48596:CDS |
| CTAGCTAGCATGCTGAGACA+TGG | 0.551458 | 4.1:-66833149 | None:intergenic |
| AGCCAAAGAGACGTGGGAGA+AGG | 0.560631 | 4.1:+66832962 | MS.gene48596:CDS |
| TGCAAGAAATTTGAATCTCG+AGG | 0.563863 | 4.1:+66832460 | MS.gene48596:CDS |
| AGGGTGTAAATGCACAGCCT+TGG | 0.568045 | 4.1:-66831228 | None:intergenic |
| TGTAAATGCACAGCCTTGGT+TGG | 0.568573 | 4.1:-66831224 | None:intergenic |
| TTGGCTATCAGGCTGAGACA+TGG | 0.570478 | 4.1:-66833047 | None:intergenic |
| CTGATCATTGTTGGGAGTGG+TGG | 0.572392 | 4.1:+66830432 | MS.gene48596:CDS |
| TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 4.1:+66830865 | MS.gene48596:CDS |
| TACATGGTGGCTCAGAAGGG+TGG | 0.573659 | 4.1:+66831335 | MS.gene48596:intron |
| GCAAGAAATTTGAATCTCGA+GGG | 0.574935 | 4.1:+66832461 | MS.gene48596:CDS |
| GCAGATGAGTTGTCAGCACA+GGG | 0.575960 | 4.1:-66832234 | None:intergenic |
| TAGCTTGTATGCAAATGTGC+TGG | 0.579636 | 4.1:+66832700 | MS.gene48596:CDS |
| ATAAAGATGCTCAGTGCTTG+CGG | 0.580529 | 4.1:-66833020 | None:intergenic |
| TTGACAAAATATCTTGAGGA+AGG | 0.583257 | 4.1:+66832388 | MS.gene48596:CDS |
| GCCCGATAGCCAAAGAGACG+TGG | 0.586320 | 4.1:+66832955 | MS.gene48596:CDS |
| GTTGAAGGTGAACGTGATGA+AGG | 0.592601 | 4.1:+66830669 | MS.gene48596:CDS |
| ATGCGTGCTGTTATTAAGGA+TGG | 0.593265 | 4.1:+66831413 | MS.gene48596:CDS |
| CAGTATGTATGCATCAAGCA+GGG | 0.597700 | 4.1:+66831041 | MS.gene48596:CDS |
| GAATATTCTGCCACTGATGA+CGG | 0.599778 | 4.1:+66831500 | MS.gene48596:CDS |
| GAATATTCACAAAAGGAATG+TGG | 0.603006 | 4.1:-66831485 | None:intergenic |
| GTAAGAAAATGTTCAAACTG+TGG | 0.607299 | 4.1:+66832866 | MS.gene48596:CDS |
| GGAGACAATGAAAGTGATGA+TGG | 0.609236 | 4.1:+66830573 | MS.gene48596:CDS |
| AGTGAAGGTCATGGTAGTGA+AGG | 0.614950 | 4.1:+66830810 | MS.gene48596:CDS |
| GATGAACGTGAACGTGATGA+AGG | 0.615811 | 4.1:+66830714 | MS.gene48596:CDS |
| CCATGAACCTACTCCAACCA+AGG | 0.616069 | 4.1:+66831211 | MS.gene48596:CDS |
| TCTGCGTTGTCTTGAACGCG+AGG | 0.617404 | 4.1:+66832252 | MS.gene48596:CDS |
| TTTCAAACGTCCGTCATCAG+TGG | 0.632560 | 4.1:-66831510 | None:intergenic |
| TGCACAGCCTTGGTTGGAGT+AGG | 0.637563 | 4.1:-66831218 | None:intergenic |
| TGTTACTGGAAACTCAACAA+TGG | 0.640006 | 4.1:+66832772 | MS.gene48596:CDS |
| TATCTGATCATTGTTGGGAG+TGG | 0.640013 | 4.1:+66830429 | MS.gene48596:CDS |
| CCCGATAGCCAAAGAGACGT+GGG | 0.644492 | 4.1:+66832956 | MS.gene48596:CDS |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 4.1:+66831123 | MS.gene48596:CDS |
| CAAGAAATTTGAATCTCGAG+GGG | 0.648693 | 4.1:+66832462 | MS.gene48596:CDS |
| GAAGTTGACAAAATATCTTG+AGG | 0.651334 | 4.1:+66832384 | MS.gene48596:CDS |
| TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 4.1:+66830854 | MS.gene48596:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 4.1:+66830756 | MS.gene48596:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 4.1:+66830801 | MS.gene48596:CDS |
| CAAAGGGAGGCAAATCAAAG+AGG | 0.670795 | 4.1:+66832987 | MS.gene48596:CDS |
| GAACGTGAACGTGATGAAGG+TGG | 0.679340 | 4.1:+66830717 | MS.gene48596:CDS |
| GATGATGATGATGTGAGTCA+TGG | 0.679569 | 4.1:+66830495 | MS.gene48596:CDS |
| ACTTTGTACGAGTGAGACGT+CGG | 0.685988 | 4.1:-66831112 | None:intergenic |
| AGGTGTTGCACTGAGTGTGA+AGG | 0.686205 | 4.1:+66832330 | MS.gene48596:CDS |
| CGTGAACGTGATGAAGGTGG+AGG | 0.688329 | 4.1:+66830720 | MS.gene48596:CDS |
| TTAACGGCGAGATTGTAATG+AGG | 0.688703 | 4.1:+66831018 | MS.gene48596:CDS |
| CCATTGCCAGTGAAGTGCAA+AGG | 0.692298 | 4.1:+66832809 | MS.gene48596:CDS |
| AGTATGTATGCATCAAGCAG+GGG | 0.693163 | 4.1:+66831042 | MS.gene48596:CDS |
| AGTGAAGTTGATGAAAGTGA+AGG | 0.694719 | 4.1:+66830780 | MS.gene48596:CDS |
| CTGGCAATGGATCACGTACG+TGG | 0.695647 | 4.1:-66832796 | None:intergenic |
| GGTGGAGGTGATGAAAGTGA+AGG | 0.700815 | 4.1:+66830735 | MS.gene48596:CDS |
| TGTTTATCGGAAAATATCCG+AGG | 0.704996 | 4.1:+66831250 | MS.gene48596:CDS |
| GTGGGAGAAGGATCAAAGGG+AGG | 0.706029 | 4.1:+66832974 | MS.gene48596:CDS |
| GACAATGAAAGTGATGATGG+TGG | 0.706532 | 4.1:+66830576 | MS.gene48596:CDS |
| CTTGAATGTGAACTATTGTG+GGG | 0.712111 | 4.1:+66832589 | MS.gene48596:CDS |
| GGTGAAAGTGATGAAAGTGA+AGG | 0.717258 | 4.1:+66830690 | MS.gene48596:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 4.1:+66830750 | MS.gene48596:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 4.1:+66830795 | MS.gene48596:CDS |
| AGTGAATGTGATGAAAGTCA+AGG | 0.739796 | 4.1:+66830645 | MS.gene48596:CDS |
| CAGATGAGTTGTCAGCACAG+GGG | 0.773409 | 4.1:-66832233 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAACACAAAAAAAAATAT+GGG | - | chr4.1:66832497-66832516 | None:intergenic | 15.0% |
| !!! | TACGATTTTTATTATAAGTA+CGG | + | chr4.1:66830948-66830967 | MS.gene48596:CDS | 15.0% |
| !! | AAACAATAGAAACTTATATG+TGG | + | chr4.1:66831705-66831724 | MS.gene48596:intron | 20.0% |
| !! | AAATCATAAAGAGTTATGTT+AGG | + | chr4.1:66832110-66832129 | MS.gene48596:intron | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | + | chr4.1:66831310-66831329 | MS.gene48596:intron | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | + | chr4.1:66831311-66831330 | MS.gene48596:intron | 20.0% |
| !! | CTTCAACACAAAAAAAAATA+TGG | - | chr4.1:66832498-66832517 | None:intergenic | 20.0% |
| !!! | AGTAATGTACTCTAATTTTA+CGG | + | chr4.1:66831919-66831938 | MS.gene48596:intron | 20.0% |
| !!! | CATATTTTTTTTTGTGTTGA+AGG | + | chr4.1:66832496-66832515 | MS.gene48596:intron | 20.0% |
| ! | AAACAACAACAATGACTTTA+CGG | + | chr4.1:66830347-66830366 | MS.gene48596:CDS | 25.0% |
| ! | AAACATATCTGATCATTGTT+GGG | + | chr4.1:66830424-66830443 | MS.gene48596:CDS | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | + | chr4.1:66830888-66830907 | MS.gene48596:CDS | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | + | chr4.1:66832018-66832037 | MS.gene48596:intron | 25.0% |
| ! | GATTATAGTACTAGTGATAA+AGG | + | chr4.1:66830609-66830628 | MS.gene48596:CDS | 25.0% |
| !! | AATTTTACGAAGAATACTCA+AGG | + | chr4.1:66830519-66830538 | MS.gene48596:CDS | 25.0% |
| !! | ATGTGTTTACAAATTTTTGC+AGG | + | chr4.1:66832660-66832679 | MS.gene48596:CDS | 25.0% |
| !! | ATTTTACGAAGAATACTCAA+GGG | + | chr4.1:66830520-66830539 | MS.gene48596:CDS | 25.0% |
| !! | TGTGTTTACAAATTTTTGCA+GGG | + | chr4.1:66832661-66832680 | MS.gene48596:CDS | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | - | chr4.1:66832014-66832033 | None:intergenic | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | + | chr4.1:66831523-66831542 | MS.gene48596:intron | 25.0% |
| !!! | ATTTCTGCATAATTTTGATG+AGG | + | chr4.1:66832153-66832172 | MS.gene48596:intron | 25.0% |
| AAGAGTTATGTTAGGAAGAA+AGG | + | chr4.1:66832118-66832137 | MS.gene48596:intron | 30.0% | |
| AATCTATGCTTTATCTACCT+CGG | - | chr4.1:66831270-66831289 | None:intergenic | 30.0% | |
| AGCATTTATCAAGGTTAGAT+AGG | + | chr4.1:66831078-66831097 | MS.gene48596:CDS | 30.0% | |
| CAAAAAAAAATATGGGAGCA+TGG | - | chr4.1:66832490-66832509 | None:intergenic | 30.0% | |
| CAAATATAACTGTTTGTGAG+TGG | - | chr4.1:66831664-66831683 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | + | chr4.1:66831662-66831681 | MS.gene48596:intron | 30.0% | |
| CATATGAGAACAAAGAATTG+TGG | + | chr4.1:66832017-66832036 | MS.gene48596:intron | 30.0% | |
| GAAACATATCTGATCATTGT+TGG | + | chr4.1:66830423-66830442 | MS.gene48596:CDS | 30.0% | |
| GAAGTTGACAAAATATCTTG+AGG | + | chr4.1:66832384-66832403 | MS.gene48596:CDS | 30.0% | |
| GAATATTCACAAAAGGAATG+TGG | - | chr4.1:66831488-66831507 | None:intergenic | 30.0% | |
| GTAAGAAAATGTTCAAACTG+TGG | + | chr4.1:66832866-66832885 | MS.gene48596:CDS | 30.0% | |
| GTAGATAAAGCATAGATTGA+TGG | + | chr4.1:66831272-66831291 | MS.gene48596:intron | 30.0% | |
| GTGAAAGAAGAGATTATGAA+AGG | + | chr4.1:66832310-66832329 | MS.gene48596:CDS | 30.0% | |
| TATAAGTACGGTAAGTGTAA+AGG | + | chr4.1:66830960-66830979 | MS.gene48596:CDS | 30.0% | |
| TCTTGAATGTGAACTATTGT+GGG | + | chr4.1:66832588-66832607 | MS.gene48596:CDS | 30.0% | |
| TTCTTGAATGTGAACTATTG+TGG | + | chr4.1:66832587-66832606 | MS.gene48596:CDS | 30.0% | |
| TTGACAAAATATCTTGAGGA+AGG | + | chr4.1:66832388-66832407 | MS.gene48596:CDS | 30.0% | |
| ! | AAAAATGCGTGCTGTTATTA+AGG | + | chr4.1:66831409-66831428 | MS.gene48596:CDS | 30.0% |
| ! | AACAATGACTTTACGGATTT+TGG | + | chr4.1:66830354-66830373 | MS.gene48596:CDS | 30.0% |
| ! | AATGTACTCTAATTTTACGG+AGG | + | chr4.1:66831922-66831941 | MS.gene48596:intron | 30.0% |
| ! | ACAACATATCTACCCTTTTT+GGG | - | chr4.1:66831167-66831186 | None:intergenic | 30.0% |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | + | chr4.1:66831734-66831753 | MS.gene48596:intron | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | + | chr4.1:66831942-66831961 | MS.gene48596:intron | 30.0% |
| ! | GAACATTTTCTTACAAACTC+TGG | - | chr4.1:66832860-66832879 | None:intergenic | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | + | chr4.1:66831944-66831963 | MS.gene48596:intron | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | + | chr4.1:66831943-66831962 | MS.gene48596:intron | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | + | chr4.1:66831319-66831338 | MS.gene48596:intron | 30.0% |
| !! | AATGTTTGATTTTGTTGCGT+TGG | + | chr4.1:66832543-66832562 | MS.gene48596:CDS | 30.0% |
| !! | AGATCAGATTATTTCTGCTT+TGG | + | chr4.1:66831560-66831579 | MS.gene48596:intron | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | + | chr4.1:66831945-66831964 | MS.gene48596:intron | 30.0% |
| !! | GACGTTTGAAATGTCTATTT+TGG | + | chr4.1:66831522-66831541 | MS.gene48596:intron | 30.0% |
| !! | TTGTAGCTGATTTTAAATCC+AGG | + | chr4.1:66832203-66832222 | MS.gene48596:CDS | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+AGG | + | chr4.1:66831887-66831906 | MS.gene48596:intron | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | + | chr4.1:66831182-66831201 | MS.gene48596:CDS | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | + | chr4.1:66831883-66831902 | MS.gene48596:intron | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | + | chr4.1:66831181-66831200 | MS.gene48596:CDS | 30.0% |
| AAGAATACTCAAGGGAATAC+AGG | + | chr4.1:66830528-66830547 | MS.gene48596:CDS | 35.0% | |
| AGTGAATGTGATGAAAGTCA+AGG | + | chr4.1:66830645-66830664 | MS.gene48596:CDS | 35.0% | |
| AGTGATAAAGGTGAAGATGA+TGG | + | chr4.1:66830621-66830640 | MS.gene48596:CDS | 35.0% | |
| AGTGGCAGAATATTCACAAA+AGG | - | chr4.1:66831495-66831514 | None:intergenic | 35.0% | |
| CAAGAAATTTGAATCTCGAG+GGG | + | chr4.1:66832462-66832481 | MS.gene48596:CDS | 35.0% | |
| CAGTAACAATTGGAACTTCA+GGG | - | chr4.1:66832760-66832779 | None:intergenic | 35.0% | |
| CATTAACTGCTGAAGGAATA+AGG | + | chr4.1:66830895-66830914 | MS.gene48596:CDS | 35.0% | |
| CGCAACAAAATCAAACATTC+TGG | - | chr4.1:66832542-66832561 | None:intergenic | 35.0% | |
| CTGTTAGGAAGAGTGATATT+AGG | + | chr4.1:66830988-66831007 | MS.gene48596:CDS | 35.0% | |
| CTTGAATGTGAACTATTGTG+GGG | + | chr4.1:66832589-66832608 | MS.gene48596:CDS | 35.0% | |
| GATATTAGGCGCAATGTTAA+CGG | + | chr4.1:66831002-66831021 | MS.gene48596:CDS | 35.0% | |
| GCAAGAAATTTGAATCTCGA+GGG | + | chr4.1:66832461-66832480 | MS.gene48596:CDS | 35.0% | |
| GTGAAGGAAAAAGAAGTGAA+TGG | + | chr4.1:66832346-66832365 | MS.gene48596:CDS | 35.0% | |
| GTTCATTACAGACCCAAAAA+GGG | + | chr4.1:66831152-66831171 | MS.gene48596:CDS | 35.0% | |
| GTTGAGTTTCCAGTAACAAT+TGG | - | chr4.1:66832770-66832789 | None:intergenic | 35.0% | |
| TCCCATACAATCTAGAAAAC+TGG | - | chr4.1:66831738-66831757 | None:intergenic | 35.0% | |
| TGCAAGAAATTTGAATCTCG+AGG | + | chr4.1:66832460-66832479 | MS.gene48596:CDS | 35.0% | |
| TGCATTTACACCCTGTTTAT+CGG | + | chr4.1:66831237-66831256 | MS.gene48596:CDS | 35.0% | |
| TGCTCCAAAGAAGAAGAAAA+AGG | + | chr4.1:66832832-66832851 | MS.gene48596:CDS | 35.0% | |
| TGCTGAAGGAATAAGGAAAA+TGG | + | chr4.1:66830902-66830921 | MS.gene48596:CDS | 35.0% | |
| TGTTACTGGAAACTCAACAA+TGG | + | chr4.1:66832772-66832791 | MS.gene48596:CDS | 35.0% | |
| TGTTCATTACAGACCCAAAA+AGG | + | chr4.1:66831151-66831170 | MS.gene48596:CDS | 35.0% | |
| TGTTTATCGGAAAATATCCG+AGG | + | chr4.1:66831250-66831269 | MS.gene48596:CDS | 35.0% | |
| TTGATAGAGATTGCTCGATA+TGG | + | chr4.1:66832626-66832645 | MS.gene48596:CDS | 35.0% | |
| ! | CACAACATATCTACCCTTTT+TGG | - | chr4.1:66831168-66831187 | None:intergenic | 35.0% |
| ! | CGGATATTTTCCGATAAACA+GGG | - | chr4.1:66831250-66831269 | None:intergenic | 35.0% |
| ! | GAAGATGATGATGTAGTTGT+TGG | + | chr4.1:66830849-66830868 | MS.gene48596:CDS | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | + | chr4.1:66831733-66831752 | MS.gene48596:intron | 35.0% |
| ! | TCATATAATGGGATACATGG+TGG | + | chr4.1:66831322-66831341 | MS.gene48596:intron | 35.0% |
| ! | TCGGATATTTTCCGATAAAC+AGG | - | chr4.1:66831251-66831270 | None:intergenic | 35.0% |
| !! | AAATGTCTATTTTGGGCAGA+TGG | + | chr4.1:66831530-66831549 | MS.gene48596:intron | 35.0% |
| !! | AATTTTGATGAGGCAATGAG+AGG | + | chr4.1:66832163-66832182 | MS.gene48596:intron | 35.0% |
| !! | AGTGAAGTTGATGAAAGTGA+AGG | + | chr4.1:66830780-66830799 | MS.gene48596:CDS | 35.0% |
| !! | AGTTATATTTGGTGCTGCAT+TGG | + | chr4.1:66831673-66831692 | MS.gene48596:intron | 35.0% |
| !!! | AGTGTAAAGGTTTTGCTGTT+AGG | + | chr4.1:66830973-66830992 | MS.gene48596:CDS | 35.0% |
| !!! | TCATATGTTTTGGTAACCCA+TGG | - | chr4.1:66832004-66832023 | None:intergenic | 35.0% |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | + | chr4.1:66831946-66831965 | MS.gene48596:intron | 35.0% |
| ACAAAATCACCAACGGATAG+TGG | - | chr4.1:66831628-66831647 | None:intergenic | 40.0% | |
| AGTATGTATGCATCAAGCAG+GGG | + | chr4.1:66831042-66831061 | MS.gene48596:CDS | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | + | chr4.1:66830750-66830769 | MS.gene48596:CDS | 40.0% | |
| ATAAAGATGCTCAGTGCTTG+CGG | - | chr4.1:66833023-66833042 | None:intergenic | 40.0% | |
| ATTGCCTTGAGAACAATCCA+TGG | + | chr4.1:66831984-66832003 | MS.gene48596:intron | 40.0% | |
| CAGTATGTATGCATCAAGCA+GGG | + | chr4.1:66831041-66831060 | MS.gene48596:CDS | 40.0% | |
| CCAAAAGCAGTTGTAACAGA+TGG | + | chr4.1:66831767-66831786 | MS.gene48596:intron | 40.0% | |
| CCAGTAACAATTGGAACTTC+AGG | - | chr4.1:66832761-66832780 | None:intergenic | 40.0% | |
| CCTGAAGTTCCAATTGTTAC+TGG | + | chr4.1:66832758-66832777 | MS.gene48596:CDS | 40.0% | |
| GAACAAATACCACTATCCGT+TGG | + | chr4.1:66831616-66831635 | MS.gene48596:intron | 40.0% | |
| GAATATTCTGCCACTGATGA+CGG | + | chr4.1:66831500-66831519 | MS.gene48596:CDS | 40.0% | |
| GATGAGCGATATGATGAAAC+TGG | + | chr4.1:66830552-66830571 | MS.gene48596:CDS | 40.0% | |
| GCATCTGAACAAGAATGCTA+TGG | + | chr4.1:66831856-66831875 | MS.gene48596:intron | 40.0% | |
| GGAGACAATGAAAGTGATGA+TGG | + | chr4.1:66830573-66830592 | MS.gene48596:CDS | 40.0% | |
| GGATGACATACAAAAGCTTC+AGG | + | chr4.1:66832721-66832740 | MS.gene48596:CDS | 40.0% | |
| GGTGAAAGTGATGAAAGTGA+AGG | + | chr4.1:66830690-66830709 | MS.gene48596:CDS | 40.0% | |
| GTAGAACCGTAATCATGTTC+CGG | - | chr4.1:66830384-66830403 | None:intergenic | 40.0% | |
| TACTTGCGTGACGATTTCTT+TGG | + | chr4.1:66832049-66832068 | MS.gene48596:intron | 40.0% | |
| TATCTGATCATTGTTGGGAG+TGG | + | chr4.1:66830429-66830448 | MS.gene48596:CDS | 40.0% | |
| TGATTACGGTTCTACGAATG+TGG | + | chr4.1:66830389-66830408 | MS.gene48596:CDS | 40.0% | |
| TTAACGGCGAGATTGTAATG+AGG | + | chr4.1:66831018-66831037 | MS.gene48596:CDS | 40.0% | |
| TTCTTAGTGAACCCAACATC+AGG | - | chr4.1:66831365-66831384 | None:intergenic | 40.0% | |
| TTGCCTTGAGAACAATCCAT+GGG | + | chr4.1:66831985-66832004 | MS.gene48596:intron | 40.0% | |
| TTTGTTGCGTTGGACGAAAA+AGG | + | chr4.1:66832553-66832572 | MS.gene48596:CDS | 40.0% | |
| ! | AGTGTCTGCAGAACATTTTC+TGG | - | chr4.1:66832909-66832928 | None:intergenic | 40.0% |
| ! | ATGCGTGCTGTTATTAAGGA+TGG | + | chr4.1:66831413-66831432 | MS.gene48596:CDS | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | - | chr4.1:66831770-66831789 | None:intergenic | 40.0% |
| ! | GATGATGATGATGTGAGTCA+TGG | + | chr4.1:66830495-66830514 | MS.gene48596:CDS | 40.0% |
| ! | GGTGCCTTTTTCTTCTTCTT+TGG | - | chr4.1:66832839-66832858 | None:intergenic | 40.0% |
| ! | TAACCCATGGATTGTTCTCA+AGG | - | chr4.1:66831991-66832010 | None:intergenic | 40.0% |
| ! | TAGCTTGTATGCAAATGTGC+TGG | + | chr4.1:66832700-66832719 | MS.gene48596:CDS | 40.0% |
| ! | TGATGATGTAGTTGTTGGTG+AGG | + | chr4.1:66830854-66830873 | MS.gene48596:CDS | 40.0% |
| ! | TGCATACAAGCTACCCTTTT+TGG | - | chr4.1:66832693-66832712 | None:intergenic | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | + | chr4.1:66830860-66830879 | MS.gene48596:CDS | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | + | chr4.1:66830865-66830884 | MS.gene48596:CDS | 40.0% |
| !! | AGATGGTGATGGTTCTATGA+GGG | + | chr4.1:66831784-66831803 | MS.gene48596:intron | 40.0% |
| !! | CTTTACGGATTTTGGTACAC+CGG | + | chr4.1:66830362-66830381 | MS.gene48596:CDS | 40.0% |
| !! | GACAATGAAAGTGATGATGG+TGG | + | chr4.1:66830576-66830595 | MS.gene48596:CDS | 40.0% |
| !! | GAGCGAAGAAGCATTTATCA+AGG | + | chr4.1:66831069-66831088 | MS.gene48596:CDS | 40.0% |
| !! | GATGAAAGTCAAGGTGTTGA+AGG | + | chr4.1:66830654-66830673 | MS.gene48596:CDS | 40.0% |
| !! | TTATTTCTGCTTTGGCGATG+TGG | + | chr4.1:66831568-66831587 | MS.gene48596:intron | 40.0% |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | + | chr4.1:66831629-66831648 | MS.gene48596:intron | 40.0% |
| AAGGGTGGATATCCTGATGT+TGG | + | chr4.1:66831350-66831369 | MS.gene48596:CDS | 45.0% | |
| ACTTTGTACGAGTGAGACGT+CGG | - | chr4.1:66831115-66831134 | None:intergenic | 45.0% | |
| AGGGTGGATATCCTGATGTT+GGG | + | chr4.1:66831351-66831370 | MS.gene48596:CDS | 45.0% | |
| CAAAGGGAGGCAAATCAAAG+AGG | + | chr4.1:66832987-66833006 | MS.gene48596:CDS | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | - | chr4.1:66831635-66831654 | None:intergenic | 45.0% | |
| CCTGATAGCCAAAAAGACGT+GGG | + | chr4.1:66833058-66833077 | MS.gene48596:CDS | 45.0% | |
| CGAGGCTGCTGAAATCTATA+CGG | + | chr4.1:66832270-66832289 | MS.gene48596:CDS | 45.0% | |
| GATGAACGTGAACGTGATGA+AGG | + | chr4.1:66830714-66830733 | MS.gene48596:CDS | 45.0% | |
| GCAGTATGTATGCATCAAGC+AGG | + | chr4.1:66831040-66831059 | MS.gene48596:CDS | 45.0% | |
| GCAGTTGTAACAGATGGTGA+TGG | + | chr4.1:66831773-66831792 | MS.gene48596:intron | 45.0% | |
| GGTACACCGGAACATGATTA+CGG | + | chr4.1:66830375-66830394 | MS.gene48596:CDS | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | + | chr4.1:66830756-66830775 | MS.gene48596:CDS | 45.0% | |
| GTTGAAGGTGAACGTGATGA+AGG | + | chr4.1:66830669-66830688 | MS.gene48596:CDS | 45.0% | |
| TAATGAACACAGAGCCTAGC+TGG | - | chr4.1:66831140-66831159 | None:intergenic | 45.0% | |
| TAGCTAGCATGCTGAGACAT+GGG | - | chr4.1:66833151-66833170 | None:intergenic | 45.0% | |
| TGGACGAAAAAGGCGAAGAT+TGG | + | chr4.1:66832563-66832582 | MS.gene48596:CDS | 45.0% | |
| TGTAAATGCACAGCCTTGGT+TGG | - | chr4.1:66831227-66831246 | None:intergenic | 45.0% | |
| TTCTATGAGGGAGGCGATAA+AGG | + | chr4.1:66831796-66831815 | MS.gene48596:intron | 45.0% | |
| TTGCGTGACGATTTCTTTGG+TGG | + | chr4.1:66832052-66832071 | MS.gene48596:intron | 45.0% | |
| TTTCAAACGTCCGTCATCAG+TGG | - | chr4.1:66831513-66831532 | None:intergenic | 45.0% | |
| ! | AGTGAAGGTCATGGTAGTGA+AGG | + | chr4.1:66830765-66830784 | MS.gene48596:CDS | 45.0% |
| ! | ATCCTTCTCCCACGTCTTTT+TGG | - | chr4.1:66833069-66833088 | None:intergenic | 45.0% |
| !! | AGTGATGATGGTGGTTGTTC+TGG | + | chr4.1:66830585-66830604 | MS.gene48596:CDS | 45.0% |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | + | chr4.1:66831679-66831698 | MS.gene48596:intron | 45.0% |
| !! | CAGATGGTGATGGTTCTATG+AGG | + | chr4.1:66831783-66831802 | MS.gene48596:intron | 45.0% |
| !! | TGCAGGGAAGTGTCCAAAAA+GGG | + | chr4.1:66832677-66832696 | MS.gene48596:CDS | 45.0% |
| !! | TTGCAGGGAAGTGTCCAAAA+AGG | + | chr4.1:66832676-66832695 | MS.gene48596:CDS | 45.0% |
| AGACGTGGGAGAAGGATCAA+AGG | + | chr4.1:66832970-66832989 | MS.gene48596:CDS | 50.0% | |
| AGCCAAAAAGACGTGGGAGA+AGG | + | chr4.1:66833064-66833083 | MS.gene48596:CDS | 50.0% | |
| AGGGTGTAAATGCACAGCCT+TGG | - | chr4.1:66831231-66831250 | None:intergenic | 50.0% | |
| ATCCTTCTCCCACGTCTCTT+TGG | - | chr4.1:66832967-66832986 | None:intergenic | 50.0% | |
| CAGATGAGTTGTCAGCACAG+GGG | - | chr4.1:66832236-66832255 | None:intergenic | 50.0% | |
| CATAGACGATGACGCGTACT+TGG | - | chr4.1:66831830-66831849 | None:intergenic | 50.0% | |
| CCATGAACCTACTCCAACCA+AGG | + | chr4.1:66831211-66831230 | MS.gene48596:CDS | 50.0% | |
| CCATTGCCAGTGAAGTGCAA+AGG | + | chr4.1:66832809-66832828 | MS.gene48596:CDS | 50.0% | |
| CCTTGGTTGGAGTAGGTTCA+TGG | - | chr4.1:66831214-66831233 | None:intergenic | 50.0% | |
| CCTTTGCACTTCACTGGCAA+TGG | - | chr4.1:66832812-66832831 | None:intergenic | 50.0% | |
| CTAGCTAGCATGCTGAGACA+TGG | - | chr4.1:66833152-66833171 | None:intergenic | 50.0% | |
| CTGATCATTGTTGGGAGTGG+TGG | + | chr4.1:66830432-66830451 | MS.gene48596:CDS | 50.0% | |
| GAACGTGAACGTGATGAAGG+TGG | + | chr4.1:66830717-66830736 | MS.gene48596:CDS | 50.0% | |
| GACGTGGGAGAAGGATCAAA+GGG | + | chr4.1:66832971-66832990 | MS.gene48596:CDS | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | - | chr4.1:66832237-66832256 | None:intergenic | 50.0% | |
| GCCTGATAGCCAAAAAGACG+TGG | + | chr4.1:66833057-66833076 | MS.gene48596:CDS | 50.0% | |
| GGATACATGGTGGCTCAGAA+GGG | + | chr4.1:66831332-66831351 | MS.gene48596:intron | 50.0% | |
| GGTGGAGGTGATGAAAGTGA+AGG | + | chr4.1:66830735-66830754 | MS.gene48596:CDS | 50.0% | |
| TATGAGGGAGGCGATAAAGG+CGG | + | chr4.1:66831799-66831818 | MS.gene48596:intron | 50.0% | |
| TCCCACGTCTCTTTGGCTAT+CGG | - | chr4.1:66832960-66832979 | None:intergenic | 50.0% | |
| TGAGACATGGGCACAGAAAG+AGG | - | chr4.1:66832935-66832954 | None:intergenic | 50.0% | |
| TGGCTATCAGGCTGAGACAT+GGG | - | chr4.1:66833049-66833068 | None:intergenic | 50.0% | |
| TTGGCTATCAGGCTGAGACA+TGG | - | chr4.1:66833050-66833069 | None:intergenic | 50.0% | |
| ! | AGGTGTTGCACTGAGTGTGA+AGG | + | chr4.1:66832330-66832349 | MS.gene48596:CDS | 50.0% |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | + | chr4.1:66831123-66831142 | MS.gene48596:CDS | 50.0% |
| !! | TGGTGATGGTTCTATGAGGG+AGG | + | chr4.1:66831787-66831806 | MS.gene48596:intron | 50.0% |
| !!! | CCCACGTCTTTTTGGCTATC+AGG | - | chr4.1:66833061-66833080 | None:intergenic | 50.0% |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | + | chr4.1:66831952-66831971 | MS.gene48596:intron | 50.0% |
| AGCCAAAGAGACGTGGGAGA+AGG | + | chr4.1:66832962-66832981 | MS.gene48596:CDS | 55.0% | |
| CAGCACAGGGGATGAAAACC+TGG | - | chr4.1:66832224-66832243 | None:intergenic | 55.0% | |
| CCCACGTCTCTTTGGCTATC+GGG | - | chr4.1:66832959-66832978 | None:intergenic | 55.0% | |
| CCCGATAGCCAAAGAGACGT+GGG | + | chr4.1:66832956-66832975 | MS.gene48596:CDS | 55.0% | |
| CGCAGATGAGTTGTCAGCAC+AGG | - | chr4.1:66832238-66832257 | None:intergenic | 55.0% | |
| CGTGAACGTGATGAAGGTGG+AGG | + | chr4.1:66830720-66830739 | MS.gene48596:CDS | 55.0% | |
| CTGGCAATGGATCACGTACG+TGG | - | chr4.1:66832799-66832818 | None:intergenic | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | + | chr4.1:66831331-66831350 | MS.gene48596:intron | 55.0% | |
| GTGGGAGAAGGATCAAAGGG+AGG | + | chr4.1:66832974-66832993 | MS.gene48596:CDS | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | + | chr4.1:66831335-66831354 | MS.gene48596:intron | 55.0% | |
| TCTGCGTTGTCTTGAACGCG+AGG | + | chr4.1:66832252-66832271 | MS.gene48596:CDS | 55.0% | |
| TGCACAGCCTTGGTTGGAGT+AGG | - | chr4.1:66831221-66831240 | None:intergenic | 55.0% | |
| TGGCTATCGGGCTGAGACAT+GGG | - | chr4.1:66832947-66832966 | None:intergenic | 55.0% | |
| TTGGCTATCGGGCTGAGACA+TGG | - | chr4.1:66832948-66832967 | None:intergenic | 55.0% | |
| ! | GGAGCACCTTTGCACTTCAC+TGG | - | chr4.1:66832818-66832837 | None:intergenic | 55.0% |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | + | chr4.1:66831957-66831976 | MS.gene48596:intron | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | + | chr4.1:66831958-66831977 | MS.gene48596:intron | 55.0% |
| GCCCGATAGCCAAAGAGACG+TGG | + | chr4.1:66832955-66832974 | MS.gene48596:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 66830342 | 66833171 | 66830342 | ID=MS.gene48596 |
| chr4.1 | mRNA | 66830342 | 66833171 | 66830342 | ID=MS.gene48596.t1;Parent=MS.gene48596 |
| chr4.1 | exon | 66830342 | 66831271 | 66830342 | ID=MS.gene48596.t1.exon1;Parent=MS.gene48596.t1 |
| chr4.1 | CDS | 66830342 | 66831271 | 66830342 | ID=cds.MS.gene48596.t1;Parent=MS.gene48596.t1 |
| chr4.1 | exon | 66831350 | 66831524 | 66831350 | ID=MS.gene48596.t1.exon2;Parent=MS.gene48596.t1 |
| chr4.1 | CDS | 66831350 | 66831524 | 66831350 | ID=cds.MS.gene48596.t1;Parent=MS.gene48596.t1 |
| chr4.1 | exon | 66832185 | 66832483 | 66832185 | ID=MS.gene48596.t1.exon3;Parent=MS.gene48596.t1 |
| chr4.1 | CDS | 66832185 | 66832483 | 66832185 | ID=cds.MS.gene48596.t1;Parent=MS.gene48596.t1 |
| chr4.1 | exon | 66832518 | 66833171 | 66832518 | ID=MS.gene48596.t1.exon4;Parent=MS.gene48596.t1 |
| chr4.1 | CDS | 66832518 | 66833171 | 66832518 | ID=cds.MS.gene48596.t1;Parent=MS.gene48596.t1 |
| Gene Sequence |
| Protein sequence |
