AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene48613

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48613.t1 MTR_4g033295 95.876 194 7 1 1 193 1 194 1.27e-138 385
MS.gene48613.t1 MTR_4g033295 95.531 179 7 1 1 178 1 179 8.53e-126 352
MS.gene48613.t1 MTR_4g033295 94.872 156 7 1 1 155 1 156 4.26e-102 292
MS.gene48613.t1 MTR_1g052470 67.416 89 27 1 103 189 282 370 2.08e-36 130
MS.gene48613.t1 MTR_4g065870 74.684 79 20 0 112 190 350 428 2.96e-36 131
MS.gene48613.t1 MTR_3g028520 68.132 91 27 1 105 193 308 398 1.34e-35 129
MS.gene48613.t1 MTR_3g027650 68.132 91 27 1 105 193 308 398 1.34e-35 129
MS.gene48613.t1 MTR_8g036235 67.045 88 27 1 105 190 302 389 1.72e-34 125
MS.gene48613.t1 MTR_2g098310 68.966 87 25 1 105 189 318 404 1.44e-33 123
MS.gene48613.t1 MTR_7g092540 64.368 87 29 1 105 189 229 315 5.21e-33 120
MS.gene48613.t1 MTR_1g116790 58.333 96 40 0 94 189 242 337 3.07e-32 119
MS.gene48613.t1 MTR_4g065870 82.090 67 12 0 112 178 350 416 5.94e-32 119
MS.gene48613.t1 MTR_3g027650 75.000 76 17 1 105 178 308 383 8.57e-32 119
MS.gene48613.t1 MTR_2g098310 72.152 79 20 1 105 181 318 396 4.14e-30 114
MS.gene48613.t1 MTR_7g092540 68.354 79 23 1 105 181 229 307 1.65e-29 110
MS.gene48613.t1 MTR_2g098310 49.180 122 25 2 105 189 318 439 1.03e-26 105
MS.gene48613.t1 MTR_3g027650 81.132 53 8 1 105 155 308 360 6.85e-22 91.7
MS.gene48613.t1 MTR_8g036235 77.358 53 10 1 105 155 302 354 3.10e-20 87.4
MS.gene48613.t1 MTR_4g065870 88.636 44 5 0 112 155 350 393 5.39e-20 86.7
MS.gene48613.t1 MTR_2g098310 77.358 53 10 1 105 155 318 370 2.81e-19 84.7
MS.gene48613.t1 MTR_4g131160 62.121 66 24 1 116 181 195 259 3.30e-19 84.3
MS.gene48613.t1 MTR_4g131160 62.121 66 24 1 116 181 198 262 3.39e-19 84.3
MS.gene48613.t1 MTR_3g498825 60.000 65 26 0 117 181 147 211 7.90e-18 80.1
MS.gene48613.t1 MTR_1g080890 59.091 66 26 1 116 181 192 256 1.78e-17 79.3
MS.gene48613.t1 MTR_1g017350 58.462 65 27 0 117 181 260 324 8.50e-17 77.8
MS.gene48613.t1 MTR_1g017350 58.462 65 27 0 117 181 260 324 8.74e-17 77.8
MS.gene48613.t1 MTR_1g017350 58.462 65 27 0 117 181 260 324 9.05e-17 77.8
MS.gene48613.t1 MTR_1g017350 58.462 65 27 0 117 181 260 324 9.31e-17 77.8
MS.gene48613.t1 MTR_5g048860 56.923 65 28 0 117 181 365 429 1.12e-15 74.7
MS.gene48613.t1 MTR_8g099880 55.385 65 29 0 117 181 145 209 1.25e-15 73.9
MS.gene48613.t1 MTR_8g065740 55.385 65 29 0 117 181 305 369 1.33e-15 74.3
MS.gene48613.t1 MTR_7g053410 55.385 65 29 0 117 181 317 381 2.13e-15 73.9
MS.gene48613.t1 MTR_3g116770 55.385 65 29 0 117 181 191 255 2.17e-15 73.6
MS.gene48613.t1 MTR_3g116770 55.385 65 29 0 117 181 191 255 2.19e-15 73.6
MS.gene48613.t1 MTR_7g053410 55.385 65 29 0 117 181 317 381 2.35e-15 73.9
MS.gene48613.t1 MTR_8g012290 55.385 65 29 0 117 181 291 355 3.33e-15 73.2
MS.gene48613.t1 MTR_8g012290 55.385 65 29 0 117 181 291 355 3.35e-15 73.2
MS.gene48613.t1 MTR_6g052280 72.727 44 12 0 112 155 49 92 4.73e-15 68.9
MS.gene48613.t1 MTR_4g070320 53.846 65 30 0 117 181 143 207 1.24e-14 71.2
MS.gene48613.t1 MTR_1g018090 57.576 66 27 1 116 181 273 337 3.59e-14 70.1
MS.gene48613.t1 MTR_8g062240 49.231 65 33 0 117 181 151 215 2.69e-13 67.0
MS.gene48613.t1 MTR_5g037250 47.692 65 34 0 117 181 112 176 4.89e-13 65.9
MS.gene48613.t1 MTR_3g103030 53.030 66 30 1 116 181 228 292 5.37e-13 66.6
MS.gene48613.t1 MTR_5g005110 46.667 90 42 3 92 181 204 287 5.76e-13 66.2
MS.gene48613.t1 MTR_7g092510 47.761 67 35 0 115 181 171 237 2.75e-12 64.7
MS.gene48613.t1 MTR_1g070870 62.121 66 24 1 116 181 122 186 5.71e-12 63.2
MS.gene48613.t1 MTR_1g070870 62.121 66 24 1 116 181 119 183 5.76e-12 63.2
MS.gene48613.t1 MTR_3g101810 56.140 57 24 1 127 183 181 236 8.78e-12 62.8
MS.gene48613.t1 MTR_1g059270 46.154 65 35 0 117 181 160 224 1.03e-11 62.4
MS.gene48613.t1 MTR_1g059270 46.154 65 35 0 117 181 160 224 1.29e-11 62.4
MS.gene48613.t1 MTR_8g093500 59.259 54 21 1 127 180 124 176 3.35e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48613.t1 AT1G35460 44.635 233 72 6 10 189 25 253 1.04e-49 162
MS.gene48613.t1 AT4G09180 46.392 194 71 5 9 193 90 259 1.62e-42 143
MS.gene48613.t1 AT1G51140 67.442 86 28 0 105 190 292 377 1.59e-36 130
MS.gene48613.t1 AT2G42280 74.074 81 21 0 109 189 271 351 1.39e-35 128
MS.gene48613.t1 AT2G43140 68.293 82 26 0 108 189 125 206 1.00e-33 119
MS.gene48613.t1 AT2G43140 68.293 82 26 0 108 189 222 303 2.53e-33 121
MS.gene48613.t1 AT1G05805 60.870 92 33 1 105 193 268 359 3.45e-32 119
MS.gene48613.t1 AT2G42280 80.000 70 14 0 109 178 271 340 1.27e-31 117
MS.gene48613.t1 AT1G35460 39.196 199 64 6 10 155 25 219 6.43e-28 105
MS.gene48613.t1 AT2G24260 63.636 66 23 1 116 181 34 98 3.68e-20 85.1
MS.gene48613.t1 AT2G24260 62.687 67 24 1 115 181 136 201 1.90e-19 84.7
MS.gene48613.t1 AT4G30980 62.121 66 24 1 116 181 129 193 2.86e-19 84.0
MS.gene48613.t1 AT4G30980 62.121 66 24 1 116 181 177 241 5.37e-19 83.6
MS.gene48613.t1 AT5G58010 59.091 66 26 1 116 181 98 162 1.14e-18 82.0
MS.gene48613.t1 AT4G34530 55.128 78 35 0 104 181 159 236 1.77e-17 79.3
MS.gene48613.t1 AT5G50915 58.462 65 27 0 117 181 136 200 8.45e-17 76.6
MS.gene48613.t1 AT5G50915 58.462 65 27 0 117 181 136 200 8.45e-17 76.6
MS.gene48613.t1 AT5G50915 58.462 65 27 0 117 181 136 200 1.05e-16 76.6
MS.gene48613.t1 AT5G50915 58.462 65 27 0 117 181 136 200 1.05e-16 76.6
MS.gene48613.t1 AT1G10120 58.462 65 27 0 117 181 206 270 3.22e-16 75.9
MS.gene48613.t1 AT1G10120 58.462 65 27 0 117 181 206 270 3.22e-16 75.9
MS.gene48613.t1 AT1G26260 52.632 76 34 1 106 181 192 265 4.48e-16 75.5
MS.gene48613.t1 AT1G26260 52.632 76 34 1 106 181 163 236 4.51e-16 75.5
MS.gene48613.t1 AT1G26260 52.632 76 34 1 106 181 214 287 4.72e-16 75.5
MS.gene48613.t1 AT1G26260 52.632 76 34 1 106 181 214 287 4.72e-16 75.5
MS.gene48613.t1 AT1G26260 52.632 76 34 1 106 181 214 287 4.72e-16 75.5
MS.gene48613.t1 AT1G26260 52.632 76 34 1 106 181 214 287 4.72e-16 75.5
MS.gene48613.t1 AT1G68920 55.385 65 29 0 117 181 303 367 1.56e-15 74.3
MS.gene48613.t1 AT1G68920 55.385 65 29 0 117 181 303 367 1.56e-15 74.3
MS.gene48613.t1 AT1G68920 55.385 65 29 0 117 181 303 367 1.56e-15 74.3
MS.gene48613.t1 AT1G68920 55.385 65 29 0 117 181 302 366 1.60e-15 74.3
MS.gene48613.t1 AT1G18400 53.846 65 30 0 117 181 145 209 2.01e-15 72.4
MS.gene48613.t1 AT1G18400 53.846 65 30 0 117 181 145 209 2.78e-15 72.4
MS.gene48613.t1 AT3G07340 55.385 65 29 0 117 181 258 322 3.56e-15 73.2
MS.gene48613.t1 AT3G07340 55.385 65 29 0 117 181 258 322 3.67e-15 73.2
MS.gene48613.t1 AT1G73830 53.846 65 30 0 117 181 147 211 4.01e-15 71.6
MS.gene48613.t1 AT1G73830 53.846 65 30 0 117 181 147 211 4.22e-15 71.6
MS.gene48613.t1 AT1G25330 55.385 65 29 0 117 181 104 168 8.30e-15 70.5
MS.gene48613.t1 AT5G48560 53.846 65 30 0 117 181 301 365 1.22e-14 71.6
MS.gene48613.t1 AT5G48560 53.846 65 30 0 117 181 301 365 1.32e-14 71.6
MS.gene48613.t1 AT2G14760 57.576 66 27 1 116 181 236 300 2.80e-14 70.1
MS.gene48613.t1 AT5G43175 50.000 72 35 1 112 183 127 197 3.27e-14 68.9
MS.gene48613.t1 AT4G33880 57.576 66 27 1 116 181 265 329 3.66e-14 70.1
MS.gene48613.t1 AT1G27740 52.857 70 32 1 112 181 162 230 5.82e-14 68.6
MS.gene48613.t1 AT3G23690 52.308 65 31 0 117 181 191 255 7.55e-14 69.3
MS.gene48613.t1 AT2G18300 50.769 65 32 0 117 181 185 249 1.15e-13 68.6
MS.gene48613.t1 AT2G18300 50.769 65 32 0 117 181 185 249 1.18e-13 68.6
MS.gene48613.t1 AT2G18300 50.769 65 32 0 117 181 185 249 1.26e-13 68.6
MS.gene48613.t1 AT2G42300 50.746 67 33 0 115 181 183 249 1.85e-13 67.4
MS.gene48613.t1 AT3G57800 50.746 67 33 0 115 181 202 268 1.97e-13 68.2
MS.gene48613.t1 AT2G42300 50.746 67 33 0 115 181 183 249 1.98e-13 67.8
MS.gene48613.t1 AT4G36540 50.769 65 32 0 117 181 141 205 2.18e-13 67.4
MS.gene48613.t1 AT4G36540 50.769 65 32 0 117 181 141 205 2.26e-13 67.4
MS.gene48613.t1 AT1G59640 49.231 65 33 0 117 181 136 200 3.97e-13 66.2
MS.gene48613.t1 AT1G59640 49.231 65 33 0 117 181 136 200 5.93e-13 66.6
MS.gene48613.t1 AT4G02590 58.571 70 28 1 112 181 78 146 1.26e-11 62.0
MS.gene48613.t1 AT4G02590 58.571 70 28 1 112 181 141 209 1.42e-11 62.4
MS.gene48613.t1 AT4G02590 58.571 70 28 1 112 181 141 209 1.42e-11 62.4
MS.gene48613.t1 AT5G62610 44.615 65 36 0 117 181 153 217 1.48e-11 62.0
MS.gene48613.t1 AT5G62610 44.615 65 36 0 117 181 153 217 1.48e-11 62.0
MS.gene48613.t1 AT1G03040 60.606 66 25 1 116 181 143 207 2.02e-11 62.0
MS.gene48613.t1 AT1G03040 60.606 66 25 1 116 181 138 202 2.11e-11 62.0
MS.gene48613.t1 AT1G03040 60.606 66 25 1 116 181 143 207 2.66e-11 61.6

Find 44 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGGGATGCAACCTGTTTC+TGG 0.121390 4.1:+67038332 None:intergenic
AGCTAAACCTTATCCATATT+TGG 0.165931 4.1:-67040208 None:intergenic
TCAAGAACTTGTGCCAAATA+TGG 0.285178 4.1:+67040195 MS.gene48613:CDS
TATAGCAATTGACCTTAAAA+TGG 0.344917 4.1:+67039938 MS.gene48613:CDS
GAGTAAAAGTCAGATAAATA+TGG 0.368339 4.1:-67038539 None:intergenic
CCTGTTTCTGGCGGTGGTGG+TGG 0.423693 4.1:+67038344 MS.gene48613:CDS
ACTTGTGCCAAATATGGATA+AGG 0.429118 4.1:+67040201 MS.gene48613:CDS
TCTAATAACAACGTTGCTGC+TGG 0.432216 4.1:+67038482 MS.gene48613:CDS
TCCAAGGAGTATTGCTGAAA+GGG 0.458068 4.1:+67040022 MS.gene48613:CDS
ACCCTTTCAGCAATACTCCT+TGG 0.458639 4.1:-67040023 None:intergenic
CCACCACCACCGCCAGAAAC+AGG 0.468342 4.1:-67038344 None:intergenic
GTTGCTGCTGGCCATGGACC+TGG 0.468880 4.1:+67038494 MS.gene48613:CDS
ATGCAACCTGTTTCTGGCGG+TGG 0.482597 4.1:+67038338 MS.gene48613:CDS
AACAACGTTGCTGCTGGCCA+TGG 0.485904 4.1:+67038488 MS.gene48613:CDS
CAACCTGTTTCTGGCGGTGG+TGG 0.488753 4.1:+67038341 MS.gene48613:CDS
AACGGAATTATGCATTTACT+CGG 0.513601 4.1:-67042201 None:intergenic
GGATGAGACTCAGGAGTTGA+AGG 0.519475 4.1:-67038518 None:intergenic
AAGAAGATGAAGTTGATGAA+AGG 0.520823 4.1:+67038423 MS.gene48613:CDS
GATAAATATGGATGAGACTC+AGG 0.521953 4.1:-67038527 None:intergenic
GTTTCTACAGAATCAAATTG+AGG 0.522450 4.1:+67042027 MS.gene48613:CDS
TTAAAGGGACTTGAGGATAG+TGG 0.523749 4.1:+67039915 MS.gene48613:intron
TTGACAGATGTAGGAGTAAG+TGG 0.525544 4.1:-67038566 None:intergenic
TTAACTCAACTCCGGCGAGT+TGG 0.529984 4.1:+67038378 MS.gene48613:CDS
CGCTTTGCTCGAATCTTACA+CGG 0.531001 4.1:-67039984 None:intergenic
TTAGCAACATTGACAGATGT+AGG 0.531316 4.1:-67038575 None:intergenic
GCGGTGGTGGTGGTTTGACA+CGG 0.543618 4.1:+67038354 MS.gene48613:CDS
AAGTAAATTACCTGAGTGAA+AGG 0.552908 4.1:-67038602 None:intergenic
CGCAGAGATGTTAGATGAGG+CGG 0.558021 4.1:+67041991 MS.gene48613:CDS
ATCCAAGGAGTATTGCTGAA+AGG 0.558668 4.1:+67040021 MS.gene48613:CDS
GACTCAGGAGTTGAAGGACC+AGG 0.572284 4.1:-67038512 None:intergenic
GACACGGTTTAACTCAACTC+CGG 0.577713 4.1:+67038370 MS.gene48613:CDS
GAGTTGAAGGACCAGGTCCA+TGG 0.588718 4.1:-67038505 None:intergenic
TGCTAATAATCCTTTCACTC+AGG 0.591344 4.1:+67038592 MS.gene48613:CDS
AACGATTCGAACCAACTCGC+CGG 0.594282 4.1:-67038389 None:intergenic
TGTAAGATTCGAGCAAAGCG+TGG 0.594947 4.1:+67039987 MS.gene48613:CDS
AACTATCAGAACAGCAAAGG+AGG 0.605279 4.1:+67042162 MS.gene48613:CDS
TGTGTGTTTAAAGGGACTTG+AGG 0.606958 4.1:+67039908 MS.gene48613:intron
ACGGAATTATGCATTTACTC+GGG 0.609363 4.1:-67042200 None:intergenic
TTGTTGTTATGTAGGTTCGG+AGG 0.614896 4.1:+67040143 MS.gene48613:intron
AGGAACTATCAGAACAGCAA+AGG 0.629143 4.1:+67042159 MS.gene48613:intron
GTGGATTTGCTACTCATCCA+AGG 0.634120 4.1:+67040006 MS.gene48613:CDS
GGGATGCAACCTGTTTCTGG+CGG 0.639831 4.1:+67038335 None:intergenic
TACCGCAGAGATGTTAGATG+AGG 0.658172 4.1:+67041988 MS.gene48613:CDS
CGCCTCATCTAACATCTCTG+CGG 0.686528 4.1:-67041990 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAAATATCAATCAATTT+AGG + chr4.1:67039506-67039525 MS.gene48613:intron 15.0%
!! TTGTTTAATATAAAATTCTG+AGG - chr4.1:67040767-67040786 None:intergenic 15.0%
!!! AAATAGAACATTTAAAATAG+TGG - chr4.1:67039550-67039569 None:intergenic 15.0%
!!! AAATTTAGAAAGTACTAATT+GGG + chr4.1:67040600-67040619 MS.gene48613:intron 15.0%
!!! TAATTTGTTTAATCCAAATT+GGG + chr4.1:67040095-67040114 MS.gene48613:intron 15.0%
!!! TTGATATTTTGTTAAGTTAA+TGG - chr4.1:67039499-67039518 None:intergenic 15.0%
!! AATTATTGACATAATGACAT+TGG + chr4.1:67040567-67040586 MS.gene48613:intron 20.0%
!! ACTATAACATGTTTGTTTAA+TGG + chr4.1:67040245-67040264 MS.gene48613:intron 20.0%
!! ATATTAACATGTGATTTGAT+TGG + chr4.1:67039163-67039182 MS.gene48613:intron 20.0%
!! ATCTATGTAATATACTGATA+TGG + chr4.1:67039731-67039750 MS.gene48613:intron 20.0%
!! ATTAAACAAACATGTTATAG+TGG - chr4.1:67040246-67040265 None:intergenic 20.0%
!! ATTCTTTAGATTATAAGTGT+TGG + chr4.1:67039430-67039449 MS.gene48613:intron 20.0%
!! CATATTGCTAATACTAATTT+GGG + chr4.1:67040062-67040081 MS.gene48613:intron 20.0%
!! CATGTAATAAAAGAAAAGAA+AGG - chr4.1:67040373-67040392 None:intergenic 20.0%
!! TATCAAAAATCATAAATGTG+AGG + chr4.1:67041109-67041128 MS.gene48613:intron 20.0%
!! TCATATTGCTAATACTAATT+TGG + chr4.1:67040061-67040080 MS.gene48613:intron 20.0%
!! TTCAATGTAATTATATGTGT+CGG - chr4.1:67038761-67038780 None:intergenic 20.0%
!!! AAAATGGACAAAATTTTAGA+GGG + chr4.1:67039954-67039973 MS.gene48613:CDS 20.0%
!!! AACATAGTTTTACAACTTTT+AGG + chr4.1:67039358-67039377 MS.gene48613:intron 20.0%
!!! AATTTAGAAAGTACTAATTG+GGG + chr4.1:67040601-67040620 MS.gene48613:intron 20.0%
!!! ACCTGAATAAAAAGTATAAA+AGG - chr4.1:67041023-67041042 None:intergenic 20.0%
!!! AGATAAATCTTTCTCATTTT+TGG + chr4.1:67041310-67041329 MS.gene48613:intron 20.0%
!!! ATTTAATTTGTATACGTCAT+AGG + chr4.1:67038988-67039007 MS.gene48613:intron 20.0%
!!! ATTTTTAGAAGTGTTTTAGT+AGG + chr4.1:67039122-67039141 MS.gene48613:intron 20.0%
!!! CAAATTTAGAAAGTACTAAT+TGG + chr4.1:67040599-67040618 MS.gene48613:intron 20.0%
!!! CCTGAATAAAAAGTATAAAA+GGG - chr4.1:67041022-67041041 None:intergenic 20.0%
!!! CTAAAATTTTGTCCATTTTA+AGG - chr4.1:67039953-67039972 None:intergenic 20.0%
!!! CTGAATAAAAAGTATAAAAG+GGG - chr4.1:67041021-67041040 None:intergenic 20.0%
!!! GAGAATGATATATTTTTTTC+TGG + chr4.1:67041350-67041369 MS.gene48613:intron 20.0%
!!! GATAAATCTTTCTCATTTTT+GGG + chr4.1:67041311-67041330 MS.gene48613:intron 20.0%
!!! GTAACTATATGAATATCTTT+TGG - chr4.1:67039688-67039707 None:intergenic 20.0%
!!! GTAATTTGTTTAATCCAAAT+TGG + chr4.1:67040094-67040113 MS.gene48613:intron 20.0%
!!! TAAAATGGACAAAATTTTAG+AGG + chr4.1:67039953-67039972 MS.gene48613:CDS 20.0%
!!! TTTTGTTCTTATTCCTTATT+GGG + chr4.1:67039847-67039866 MS.gene48613:intron 20.0%
!!! TTTTTGTTCTTATTCCTTAT+TGG + chr4.1:67039846-67039865 MS.gene48613:intron 20.0%
! AAATGTCCAAATATGTTGTT+TGG - chr4.1:67041165-67041184 None:intergenic 25.0%
! AACTTCAAATTCAAAGAGAA+AGG - chr4.1:67040547-67040566 None:intergenic 25.0%
! AAGATACAAAGCATAATGTA+TGG - chr4.1:67040312-67040331 None:intergenic 25.0%
! AATATCTACATGCTGATATA+TGG - chr4.1:67039035-67039054 None:intergenic 25.0%
! ACTTCAAATTCAAAGAGAAA+GGG - chr4.1:67040546-67040565 None:intergenic 25.0%
! ACTTGAACAAAATCATTTCT+TGG - chr4.1:67040280-67040299 None:intergenic 25.0%
! ATAGATAAATCAAGCAAATC+CGG - chr4.1:67038641-67038660 None:intergenic 25.0%
! ATCAAAATATAGGAAAGGAT+AGG + chr4.1:67041685-67041704 MS.gene48613:intron 25.0%
! ATCTAATACATTCAAGTCTT+AGG + chr4.1:67039258-67039277 MS.gene48613:intron 25.0%
! CTAAATTTATGCTTGTCATT+TGG + chr4.1:67042067-67042086 MS.gene48613:intron 25.0%
! GAGTAAAAGTCAGATAAATA+TGG - chr4.1:67038542-67038561 None:intergenic 25.0%
! GCATTTCTCTATCAAAATAT+AGG + chr4.1:67041675-67041694 MS.gene48613:intron 25.0%
! TACAAGAACAAAAGAAACTT+AGG - chr4.1:67041959-67041978 None:intergenic 25.0%
! TACTCAAAACTAGTAAAGTT+GGG + chr4.1:67040651-67040670 MS.gene48613:intron 25.0%
! TACTTAGTGAACAAATACTT+TGG + chr4.1:67039823-67039842 MS.gene48613:intron 25.0%
! TATAGCAATTGACCTTAAAA+TGG + chr4.1:67039938-67039957 MS.gene48613:CDS 25.0%
! TATAGTTACAGAAAGATGAT+AGG + chr4.1:67039699-67039718 MS.gene48613:intron 25.0%
! TATCTACATGCTGATATATA+TGG - chr4.1:67039033-67039052 None:intergenic 25.0%
! TATGTAATATACTGATATGG+AGG + chr4.1:67039734-67039753 MS.gene48613:intron 25.0%
! TCAAAATATAGGAAAGGATA+GGG + chr4.1:67041686-67041705 MS.gene48613:intron 25.0%
! TCTCAAATTATTAACGATGT+CGG + chr4.1:67038792-67038811 MS.gene48613:intron 25.0%
! TCTCTATCAAAATATAGGAA+AGG + chr4.1:67041680-67041699 MS.gene48613:intron 25.0%
! TCTGTATTTGTGTGTTTAAA+GGG + chr4.1:67039900-67039919 MS.gene48613:intron 25.0%
! TTACTCAAAACTAGTAAAGT+TGG + chr4.1:67040650-67040669 MS.gene48613:intron 25.0%
! TTCTGTATTTGTGTGTTTAA+AGG + chr4.1:67039899-67039918 MS.gene48613:intron 25.0%
! TTGATATCTCTCAATCATTA+AGG - chr4.1:67041095-67041114 None:intergenic 25.0%
!! AACAACATATTTGGACATTT+TGG + chr4.1:67041165-67041184 MS.gene48613:intron 25.0%
!! AATGTCCAAATATGTTGTTT+GGG - chr4.1:67041164-67041183 None:intergenic 25.0%
!! CTTTTCTTTTATTACATGTG+AGG + chr4.1:67040375-67040394 MS.gene48613:intron 25.0%
!! TAGTTGAATTTTTCCCAATA+AGG - chr4.1:67039863-67039882 None:intergenic 25.0%
!! TTCATTTTCTCTCTTAATTG+TGG + chr4.1:67041931-67041950 MS.gene48613:intron 25.0%
!! TTTTTCCCAAACAACATATT+TGG + chr4.1:67041156-67041175 MS.gene48613:intron 25.0%
!!! ACTATTAATCTCTTTTTTGG+CGG + chr4.1:67041573-67041592 MS.gene48613:intron 25.0%
!!! ACTTTACTAGTTTTGAGTAA+AGG - chr4.1:67040650-67040669 None:intergenic 25.0%
!!! CCCTTTTATACTTTTTATTC+AGG + chr4.1:67041019-67041038 MS.gene48613:intron 25.0%
!!! GACACTATTAATCTCTTTTT+TGG + chr4.1:67041570-67041589 MS.gene48613:intron 25.0%
AAGTAAATTACCTGAGTGAA+AGG - chr4.1:67038605-67038624 None:intergenic 30.0%
AATACACAATACGGACAATA+AGG - chr4.1:67038829-67038848 None:intergenic 30.0%
ACAAGACCCCATTTATTAAA+TGG - chr4.1:67038867-67038886 None:intergenic 30.0%
ACACCTTAGAATCACTTATA+AGG + chr4.1:67039649-67039668 MS.gene48613:intron 30.0%
AGCTAAACCTTATCCATATT+TGG - chr4.1:67040211-67040230 None:intergenic 30.0%
CAACTTAACTACAAATCCTT+AGG + chr4.1:67040988-67041007 MS.gene48613:intron 30.0%
CATTAAGGTTACTGAAAAAG+TGG - chr4.1:67041080-67041099 None:intergenic 30.0%
CATTTATGAGAGATAGACAT+AGG + chr4.1:67038675-67038694 MS.gene48613:intron 30.0%
CATTTATTAAATGGCAAACG+GGG - chr4.1:67038858-67038877 None:intergenic 30.0%
CCATTTATTAAATGGCAAAC+GGG - chr4.1:67038859-67038878 None:intergenic 30.0%
CCCATTTATTAAATGGCAAA+CGG - chr4.1:67038860-67038879 None:intergenic 30.0%
CTAAGGATTTGTAGTTAAGT+TGG - chr4.1:67040990-67041009 None:intergenic 30.0%
GAGTATAACTGAACATAATG+AGG + chr4.1:67039778-67039797 MS.gene48613:intron 30.0%
GCCATGATTTATTAAGCTAT+CGG + chr4.1:67039328-67039347 MS.gene48613:intron 30.0%
GTTTCTACAGAATCAAATTG+AGG + chr4.1:67042027-67042046 MS.gene48613:CDS 30.0%
TAAAAGGGGATTAAAACCTA+AGG - chr4.1:67041007-67041026 None:intergenic 30.0%
TAAATTCAGTGCATACATTC+TGG - chr4.1:67040964-67040983 None:intergenic 30.0%
TGACCAATTCTGTTATAAGA+GGG + chr4.1:67041750-67041769 MS.gene48613:intron 30.0%
TGCATGAATTGATACATTAC+AGG + chr4.1:67042139-67042158 MS.gene48613:intron 30.0%
TTTGGAAGGTGAGAAATATA+GGG + chr4.1:67041281-67041300 MS.gene48613:intron 30.0%
! ACATATTTGGACATTTTGGA+AGG + chr4.1:67041169-67041188 MS.gene48613:intron 30.0%
! CCGTTTGCCATTTAATAAAT+GGG + chr4.1:67038857-67038876 MS.gene48613:intron 30.0%
! CGTTTGCCATTTAATAAATG+GGG + chr4.1:67038858-67038877 MS.gene48613:intron 30.0%
! TATGCTTGTCATTTGGTATT+CGG + chr4.1:67042074-67042093 MS.gene48613:intron 30.0%
! TGACATAATGACATTGGTTA+AGG + chr4.1:67040573-67040592 MS.gene48613:intron 30.0%
! TTACTTACACAAGTTGAATC+CGG + chr4.1:67038619-67038638 MS.gene48613:intron 30.0%
! TTTGAGTAAAGGAACTTTTG+AGG - chr4.1:67040639-67040658 None:intergenic 30.0%
!! AAAATTCTGAGGTTCAAATC+TGG - chr4.1:67040756-67040775 None:intergenic 30.0%
!! AAGAAGATGAAGTTGATGAA+AGG + chr4.1:67038423-67038442 MS.gene48613:CDS 30.0%
!! TACAATCTTAGGCTTTGTTT+GGG + chr4.1:67041231-67041250 MS.gene48613:intron 30.0%
!! TGAGTTTCTTGTTGTTATGT+AGG + chr4.1:67040135-67040154 MS.gene48613:intron 30.0%
!! TTCTTGTTGTTATGTAGGTT+CGG + chr4.1:67040140-67040159 MS.gene48613:intron 30.0%
!!! GGTTTTGAGTGAAATTTACT+TGG + chr4.1:67040396-67040415 MS.gene48613:intron 30.0%
AAACTGAGACATATCAGACA+AGG - chr4.1:67041138-67041157 None:intergenic 35.0%
AAAGAGAAAGGGTAGTTAAG+TGG - chr4.1:67040535-67040554 None:intergenic 35.0%
ACTTGTGCCAAATATGGATA+AGG + chr4.1:67040201-67040220 MS.gene48613:CDS 35.0%
AGGGAATAATATGATGTGGT+AGG + chr4.1:67041705-67041724 MS.gene48613:intron 35.0%
ATGCAACCATACAAGTGAAT+TGG - chr4.1:67039298-67039317 None:intergenic 35.0%
CAGAAAAAGTTCACCCAATT+TGG - chr4.1:67040111-67040130 None:intergenic 35.0%
CCTCCTTATAAGTGATTCTA+AGG - chr4.1:67039655-67039674 None:intergenic 35.0%
CCTTAGAATCACTTATAAGG+AGG + chr4.1:67039652-67039671 MS.gene48613:intron 35.0%
GATAAATATGGATGAGACTC+AGG - chr4.1:67038530-67038549 None:intergenic 35.0%
GCCGATAGCTTAATAAATCA+TGG - chr4.1:67039332-67039351 None:intergenic 35.0%
GGATAGGGAATAATATGATG+TGG + chr4.1:67041701-67041720 MS.gene48613:intron 35.0%
GGGAATAATATGATGTGGTA+GGG + chr4.1:67041706-67041725 MS.gene48613:intron 35.0%
GTAAGTTATGCTGTTCAATG+TGG + chr4.1:67041372-67041391 MS.gene48613:intron 35.0%
GTGACCAATTCTGTTATAAG+AGG + chr4.1:67041749-67041768 MS.gene48613:intron 35.0%
TAGGAAACACGAACACTTAT+CGG + chr4.1:67038694-67038713 MS.gene48613:intron 35.0%
TAGGTAGCCAATTTACCATT+GGG - chr4.1:67041432-67041451 None:intergenic 35.0%
TCAAGAACTTGTGCCAAATA+TGG + chr4.1:67040195-67040214 MS.gene48613:CDS 35.0%
TCAAGTCTTAGGTAAAGATG+TGG + chr4.1:67039269-67039288 MS.gene48613:intron 35.0%
TCTCCCTCTTATAACAGAAT+TGG - chr4.1:67041756-67041775 None:intergenic 35.0%
TCTGTTATAAGAGGGAGAAA+GGG + chr4.1:67041758-67041777 MS.gene48613:intron 35.0%
TGAACTGTCTGATTCTGATT+GGG + chr4.1:67040809-67040828 MS.gene48613:intron 35.0%
TGCTAATAATCCTTTCACTC+AGG + chr4.1:67038592-67038611 MS.gene48613:CDS 35.0%
TTAGCAACATTGACAGATGT+AGG - chr4.1:67038578-67038597 None:intergenic 35.0%
TTCTGTTATAAGAGGGAGAA+AGG + chr4.1:67041757-67041776 MS.gene48613:intron 35.0%
TTGGAAGGTGAGAAATATAG+GGG + chr4.1:67041282-67041301 MS.gene48613:intron 35.0%
TTTGCAGTTAGTAACCGTTT+GGG + chr4.1:67041809-67041828 MS.gene48613:intron 35.0%
! CCCGTTTGCCATTTAATAAA+TGG + chr4.1:67038856-67038875 MS.gene48613:intron 35.0%
! CGTGTGTTGTGTTTTATGAT+CGG + chr4.1:67040458-67040477 MS.gene48613:intron 35.0%
! CTTTGGAAGGTGAGAAATAT+AGG + chr4.1:67041280-67041299 MS.gene48613:intron 35.0%
! GCATACATTCTGGCATTTTT+CGG - chr4.1:67040954-67040973 None:intergenic 35.0%
! GTATGGTTGCATATGAGTTT+TGG + chr4.1:67039306-67039325 MS.gene48613:intron 35.0%
! GTGTTATTATAGTGACATGG+AGG + chr4.1:67039756-67039775 MS.gene48613:intron 35.0%
! TTTTCAACTACACAGAAACC+TGG - chr4.1:67040678-67040697 None:intergenic 35.0%
! TTTTGCAGTTAGTAACCGTT+TGG + chr4.1:67041808-67041827 MS.gene48613:intron 35.0%
!! CTACAATCTTAGGCTTTGTT+TGG + chr4.1:67041230-67041249 MS.gene48613:intron 35.0%
!! GAGGTGTTATTATAGTGACA+TGG + chr4.1:67039753-67039772 MS.gene48613:intron 35.0%
!! TTAGGCTTTGTTTGGGAATT+TGG + chr4.1:67041238-67041257 MS.gene48613:intron 35.0%
AAACTAGTAAAGTTGGGACC+AGG + chr4.1:67040657-67040676 MS.gene48613:intron 40.0%
AACTATCAGAACAGCAAAGG+AGG + chr4.1:67042162-67042181 MS.gene48613:CDS 40.0%
AATACTAGACGGAAAGTGAG+AGG + chr4.1:67039227-67039246 MS.gene48613:intron 40.0%
ACACGAACACTTATCGGATT+AGG + chr4.1:67038700-67038719 MS.gene48613:intron 40.0%
AGGAACTATCAGAACAGCAA+AGG + chr4.1:67042159-67042178 MS.gene48613:intron 40.0%
AGGATCTCAAATGAGAACGT+AGG + chr4.1:67041406-67041425 MS.gene48613:intron 40.0%
CAATATCAACTTGGCGGAAT+TGG - chr4.1:67040881-67040900 None:intergenic 40.0%
CACACACAATATCAACTTGG+CGG - chr4.1:67040887-67040906 None:intergenic 40.0%
CTAGGTAGCCAATTTACCAT+TGG - chr4.1:67041433-67041452 None:intergenic 40.0%
CTCACTTTCCGTCTAGTATT+GGG - chr4.1:67039227-67039246 None:intergenic 40.0%
CTCCACACACAATATCAACT+TGG - chr4.1:67040890-67040909 None:intergenic 40.0%
CTGAACTGTCTGATTCTGAT+TGG + chr4.1:67040808-67040827 MS.gene48613:intron 40.0%
GGGTCTCACAATACACAATA+CGG - chr4.1:67038838-67038857 None:intergenic 40.0%
GTTAGAAGCCCAATACTAGA+CGG + chr4.1:67039216-67039235 MS.gene48613:intron 40.0%
TAACATCACTCTCCACCTAA+TGG - chr4.1:67041466-67041485 None:intergenic 40.0%
TCTAATAACAACGTTGCTGC+TGG + chr4.1:67038482-67038501 MS.gene48613:CDS 40.0%
TCTCACTTTCCGTCTAGTAT+TGG - chr4.1:67039228-67039247 None:intergenic 40.0%
TGGTGTCCAATTCACTTGTA+TGG + chr4.1:67039289-67039308 MS.gene48613:intron 40.0%
TGTGTGTTTAAAGGGACTTG+AGG + chr4.1:67039908-67039927 MS.gene48613:intron 40.0%
TTAAAGGGACTTGAGGATAG+TGG + chr4.1:67039915-67039934 MS.gene48613:intron 40.0%
TTGACAGATGTAGGAGTAAG+TGG - chr4.1:67038569-67038588 None:intergenic 40.0%
! AGTTAGTAACCGTTTGGGTT+GGG + chr4.1:67041814-67041833 MS.gene48613:intron 40.0%
! AGTTGATATTGTGTGTGGAG+TGG + chr4.1:67040890-67040909 MS.gene48613:intron 40.0%
! CATTTGATCTGGGATTACAC+GGG + chr4.1:67041867-67041886 MS.gene48613:intron 40.0%
! CTTTGTTTGGGAATTTGGAG+GGG + chr4.1:67041243-67041262 MS.gene48613:intron 40.0%
! GCATTTGATCTGGGATTACA+CGG + chr4.1:67041866-67041885 MS.gene48613:intron 40.0%
! TTGTTGTTATGTAGGTTCGG+AGG + chr4.1:67040143-67040162 MS.gene48613:intron 40.0%
!! ATCCAAGGAGTATTGCTGAA+AGG + chr4.1:67040021-67040040 MS.gene48613:CDS 40.0%
!! GCTTTGTTTGGGAATTTGGA+GGG + chr4.1:67041242-67041261 MS.gene48613:intron 40.0%
!! TCCAAGGAGTATTGCTGAAA+GGG + chr4.1:67040022-67040041 MS.gene48613:CDS 40.0%
!!! CTCTTTTTTGGCGGAATTCA+CGG + chr4.1:67041582-67041601 MS.gene48613:intron 40.0%
!!! TCTTTTTTGGCGGAATTCAC+GGG + chr4.1:67041583-67041602 MS.gene48613:intron 40.0%
AAATGAGAACGTAGGCCCAA+TGG + chr4.1:67041414-67041433 MS.gene48613:intron 45.0%
ACACAACGCATGTCTGATAC+CGG - chr4.1:67038732-67038751 None:intergenic 45.0%
ACCCTTTCAGCAATACTCCT+TGG - chr4.1:67040026-67040045 None:intergenic 45.0%
ACGTAGGCCCAATGGTAAAT+TGG + chr4.1:67041422-67041441 MS.gene48613:intron 45.0%
ACTGTCTGATTCTGATTGGG+CGG + chr4.1:67040812-67040831 MS.gene48613:intron 45.0%
AGGTTCAAATCTGGACCATG+TGG - chr4.1:67040747-67040766 None:intergenic 45.0%
AGTGTTTCATCTCTTCTGCG+AGG + chr4.1:67041842-67041861 MS.gene48613:intron 45.0%
AGTTGCACAAGTCCATTAGG+TGG + chr4.1:67041451-67041470 MS.gene48613:intron 45.0%
ATGGTAAACACAGACACGCT+TGG + chr4.1:67041206-67041225 MS.gene48613:intron 45.0%
ATTCGACACACCAACAACAC+AGG - chr4.1:67039192-67039211 None:intergenic 45.0%
ATTCTGATTGGGCGGTTCTA+AGG + chr4.1:67040820-67040839 MS.gene48613:intron 45.0%
CAACTTGGCGGAATTGGATT+AGG - chr4.1:67040875-67040894 None:intergenic 45.0%
CACGCTTGGACTACAATCTT+AGG + chr4.1:67041220-67041239 MS.gene48613:intron 45.0%
CAGTTAGTAACCGTTTGGGT+TGG + chr4.1:67041813-67041832 MS.gene48613:intron 45.0%
CCTAGTTGCACAAGTCCATT+AGG + chr4.1:67041448-67041467 MS.gene48613:intron 45.0%
CGCTTTGCTCGAATCTTACA+CGG - chr4.1:67039987-67040006 None:intergenic 45.0%
CGTGTCTGTGTTTACCATAG+AGG - chr4.1:67041204-67041223 None:intergenic 45.0%
GAAGGTGAAGTCTTCCTCTA+TGG + chr4.1:67041187-67041206 MS.gene48613:intron 45.0%
GACACGGTTTAACTCAACTC+CGG + chr4.1:67038370-67038389 MS.gene48613:CDS 45.0%
TACCGCAGAGATGTTAGATG+AGG + chr4.1:67041988-67042007 MS.gene48613:CDS 45.0%
TCAATGTGGCAGTGTCTGTT+AGG + chr4.1:67041386-67041405 MS.gene48613:intron 45.0%
TGATTGGATGCCTGTGTTGT+TGG + chr4.1:67039179-67039198 MS.gene48613:intron 45.0%
TGTAAGATTCGAGCAAAGCG+TGG + chr4.1:67039987-67040006 MS.gene48613:CDS 45.0%
!! CCTAATGGACTTGTGCAACT+AGG - chr4.1:67041451-67041470 None:intergenic 45.0%
!! CGCCAAGTTGATATTGTGTG+TGG + chr4.1:67040885-67040904 MS.gene48613:intron 45.0%
!! GGCTTTGTTTGGGAATTTGG+AGG + chr4.1:67041241-67041260 MS.gene48613:intron 45.0%
!! GTGGATTTGCTACTCATCCA+AGG + chr4.1:67040006-67040025 MS.gene48613:CDS 45.0%
AACGATTCGAACCAACTCGC+CGG - chr4.1:67038392-67038411 None:intergenic 50.0%
AAGAGGGAGAAAGGGAGAGA+GGG + chr4.1:67041766-67041785 MS.gene48613:intron 50.0%
ATATGATGTGGTAGGGAGCG+AGG + chr4.1:67041713-67041732 MS.gene48613:intron 50.0%
CACAACGCATGTCTGATACC+GGG - chr4.1:67038731-67038750 None:intergenic 50.0%
CGCAGAGATGTTAGATGAGG+CGG + chr4.1:67041991-67042010 MS.gene48613:CDS 50.0%
CGCCTCATCTAACATCTCTG+CGG - chr4.1:67041993-67042012 None:intergenic 50.0%
GGATGAGACTCAGGAGTTGA+AGG - chr4.1:67038521-67038540 None:intergenic 50.0%
GTTTGGGAATTTGGAGGGGA+GGG + chr4.1:67041247-67041266 MS.gene48613:intron 50.0%
TAAGAGGGAGAAAGGGAGAG+AGG + chr4.1:67041765-67041784 MS.gene48613:intron 50.0%
TATGATGTGGTAGGGAGCGA+GGG + chr4.1:67041714-67041733 MS.gene48613:intron 50.0%
TGTTTGGGAATTTGGAGGGG+AGG + chr4.1:67041246-67041265 MS.gene48613:intron 50.0%
TTAACTCAACTCCGGCGAGT+TGG + chr4.1:67038378-67038397 MS.gene48613:CDS 50.0%
TTTGGGAATTTGGAGGGGAG+GGG + chr4.1:67041248-67041267 MS.gene48613:intron 50.0%
! ACCATGTGGTCTTGATCGGA+CGG - chr4.1:67040733-67040752 None:intergenic 50.0%
! CTGGACCATGTGGTCTTGAT+CGG - chr4.1:67040737-67040756 None:intergenic 50.0%
! GGCTTAGTGGGTGTAAAGAG+CGG + chr4.1:67041604-67041623 MS.gene48613:intron 50.0%
! TTATCGGATTAGGCGTGTCC+CGG + chr4.1:67038710-67038729 MS.gene48613:intron 50.0%
!! CTGCGAGGAGCATTTGATCT+GGG + chr4.1:67041857-67041876 MS.gene48613:intron 50.0%
!! TCTGCGAGGAGCATTTGATC+TGG + chr4.1:67041856-67041875 MS.gene48613:intron 50.0%
AAAGGGAGAGAGGGAAGGGA+GGG + chr4.1:67041775-67041794 MS.gene48613:intron 55.0%
AACAACGTTGCTGCTGGCCA+TGG + chr4.1:67038488-67038507 MS.gene48613:CDS 55.0%
CACTCTCTGCCCAACCCAAA+CGG - chr4.1:67041826-67041845 None:intergenic 55.0%
CAGTGCAGTCAGCATGCTCA+AGG + chr4.1:67040707-67040726 MS.gene48613:intron 55.0%
GAATTTGGAGGGGAGGGGAA+GGG + chr4.1:67041253-67041272 MS.gene48613:intron 55.0%
GACTCAGGAGTTGAAGGACC+AGG - chr4.1:67038515-67038534 None:intergenic 55.0%
GAGTTGAAGGACCAGGTCCA+TGG - chr4.1:67038508-67038527 None:intergenic 55.0%
GCGGAATTCACGGGCTTAGT+GGG + chr4.1:67041592-67041611 MS.gene48613:intron 55.0%
GGAGAAAGGGAGAGAGGGAA+GGG + chr4.1:67041771-67041790 MS.gene48613:intron 55.0%
!! ATGCAACCTGTTTCTGGCGG+TGG + chr4.1:67038338-67038357 MS.gene48613:CDS 55.0%
AGGGAGCGAGGGTGAGCAAA+TGG + chr4.1:67041725-67041744 MS.gene48613:intron 60.0%
GAAAGGGAGAGAGGGAAGGG+AGG + chr4.1:67041774-67041793 MS.gene48613:intron 60.0%
GCCGTCCGATCAAGACCACA+TGG + chr4.1:67040729-67040748 MS.gene48613:intron 60.0%
GGAATTTGGAGGGGAGGGGA+AGG + chr4.1:67041252-67041271 MS.gene48613:intron 60.0%
GGCGGAATTCACGGGCTTAG+TGG + chr4.1:67041591-67041610 MS.gene48613:intron 60.0%
GGGAGAAAGGGAGAGAGGGA+AGG + chr4.1:67041770-67041789 MS.gene48613:intron 60.0%
! AGAGAGGGAAGGGAGGGCAT+TGG + chr4.1:67041781-67041800 MS.gene48613:intron 60.0%
!! CAACCTGTTTCTGGCGGTGG+TGG + chr4.1:67038341-67038360 MS.gene48613:CDS 60.0%
!! GCGGTGGTGGTGGTTTGACA+CGG + chr4.1:67038354-67038373 MS.gene48613:CDS 60.0%
CCACCACCACCGCCAGAAAC+AGG - chr4.1:67038347-67038366 None:intergenic 65.0%
GTTGCTGCTGGCCATGGACC+TGG + chr4.1:67038494-67038513 MS.gene48613:CDS 65.0%
TTGGAGGGGAGGGGAAGGGA+GGG + chr4.1:67041257-67041276 MS.gene48613:intron 65.0%
TTTGGAGGGGAGGGGAAGGG+AGG + chr4.1:67041256-67041275 MS.gene48613:intron 65.0%
!! CCTGTTTCTGGCGGTGGTGG+TGG + chr4.1:67038344-67038363 MS.gene48613:CDS 65.0%
!! GGGGAAGGGAGGGCTTTGGA+AGG + chr4.1:67041267-67041286 MS.gene48613:intron 65.0%
GGGAGGGGAAGGGAGGGCTT+TGG + chr4.1:67041263-67041282 MS.gene48613:intron 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 67038338 67042208 67038338 ID=MS.gene48613
chr4.1 mRNA 67038338 67042208 67038338 ID=MS.gene48613.t1;Parent=MS.gene48613
chr4.1 exon 67038338 67038613 67038338 ID=MS.gene48613.t1.exon1;Parent=MS.gene48613.t1
chr4.1 CDS 67038338 67038613 67038338 ID=cds.MS.gene48613.t1;Parent=MS.gene48613.t1
chr4.1 exon 67039921 67040043 67039921 ID=MS.gene48613.t1.exon2;Parent=MS.gene48613.t1
chr4.1 CDS 67039921 67040043 67039921 ID=cds.MS.gene48613.t1;Parent=MS.gene48613.t1
chr4.1 exon 67040157 67040222 67040157 ID=MS.gene48613.t1.exon3;Parent=MS.gene48613.t1
chr4.1 CDS 67040157 67040222 67040157 ID=cds.MS.gene48613.t1;Parent=MS.gene48613.t1
chr4.1 exon 67041980 67042048 67041980 ID=MS.gene48613.t1.exon4;Parent=MS.gene48613.t1
chr4.1 CDS 67041980 67042048 67041980 ID=cds.MS.gene48613.t1;Parent=MS.gene48613.t1
chr4.1 exon 67042161 67042208 67042161 ID=MS.gene48613.t1.exon5;Parent=MS.gene48613.t1
chr4.1 CDS 67042161 67042208 67042161 ID=cds.MS.gene48613.t1;Parent=MS.gene48613.t1
Gene Sequence

>MS.gene48613

ATGCAACCTGTTTCTGGCGGTGGTGGTGGTTTGACACGGTTTAACTCAACTCCGGCGAGTTGGTTCGAATCGTTTATTCTTAAAGAAGAAGATGAAGTTGATGAAAGGCAACAAGATCATAACTTAAGTTTTACTCAACTGCTTTCTAATAACAACGTTGCTGCTGGCCATGGACCTGGTCCTTCAACTCCTGAGTCTCATCCATATTTATCTGACTTTTACTCTTCACCACTTACTCCTACATCTGTCAATGTTGCTAATAATCCTTTCACTCAGGTAATTTACTTACACAAGTTGAATCCGGATTTGCTTGATTTATCTATCTTTATTTACTCTTCATTTATGAGAGATAGACATAGGAAACACGAACACTTATCGGATTAGGCGTGTCCCGGTATCAGACATGCGTTGTGTCTGACACCGACACATATAATTACATTGAATTATTTGATTTTCTCAAATTATTAACGATGTCGGCGTGTCAGTGTCCTTATTGTCCGTATTGTGTATTGTGAGACCCCGTTTGCCATTTAATAAATGGGGTCTTGTTAATATTCTACTTGTGTATATCGCTCTCATGAATGAAGCTAATACGAACTCTATCAAGATGTTCTCTTATTCATTTTATAACTTTTGTTTTATATGTAATGATTTAATTTGTATACGTCATAGGTTTTTTTATGTGCATTCAACCATATATATCAGCATGTAGATATTTTTAGAAGTGTTTTAGCAAGAATTAAAATATTTTTATGTGCATTCAACCATATATCAGCATGTAGATATTTTTAGAAGTGTTTTAGTAGGAATTAAAATATCAAAATGATATTAACATGTGATTTGATTGGATGCCTGTGTTGTTGGTGTGTCGAATTAGAGTTAGAAGCCCAATACTAGACGGAAAGTGAGAGGAAACATATATCTAATACATTCAAGTCTTAGGTAAAGATGTGGTGTCCAATTCACTTGTATGGTTGCATATGAGTTTTGGCCATGATTTATTAAGCTATCGGCATGTATAACATAGTTTTACAACTTTTAGGTACGTAATAATTAATTCTATGTATGAAAATTGAGTGAGCATTCATTTTGATTCTTTAGATTATAAGTGTTGGTCACACAATTTATTCTCTCGAATTTGCGAATTATCAATTTAGTCCATTAACTTAACAAAATATCAATCAATTTAGGTATTTTTCTAAATTTAAACCACTATTTTAAATGTTCTATTTAAATCTTCTATGTTTGTCTTAATGCAGCAAAAAAGTATTCAAATATTCAAGACAGTATGAGACTGTTCAAGCACGAAAAACACCTTAGAATCACTTATAAGGAGGATTGACTAAACCAAAAGATATTCATATAGTTACAGAAAGATGATAGGAATTAAGTTATCTATGTAATATACTGATATGGAGGTGTTATTATAGTGACATGGAGGAGTATAACTGAACATAATGAGGTTGTTTGATATGTATAAAACACTACTTAGTGAACAAATACTTTGGTTTTTGTTCTTATTCCTTATTGGGAAAAATTCAACTATTATTGAATTAACATGTTCTGTATTTGTGTGTTTAAAGGGACTTGAGGATAGTGGTATAGCAATTGACCTTAAAATGGACAAAATTTTAGAGGGTTCAGTTCCGTGTAAGATTCGAGCAAAGCGTGGATTTGCTACTCATCCAAGGAGTATTGCTGAAAGGGTAACTATCTTTACTTGTCATATTGCTAATACTAATTTGGGATTTGCTTAGTAATTTGTTTAATCCAAATTGGGTGAACTTTTTCTGTTTTTGAGTTTCTTGTTGTTATGTAGGTTCGGAGGACTCGTATTAGTGATCGCATAAGAAAACTTCAAGAACTTGTGCCAAATATGGATAAGGTTTAGCTTTTCATCTTAAACCACTATAACATGTTTGTTTAATGGTTTTTATTACCAAGAAATGATTTTGTTCAAGTTGTTATTTACCATACATTATGCTTTGTATCTTTTAACAGCAAGCAAGATGATGAATTGTCATAAGCATAACCTTTCTTTTCTTTTATTACATGTGAGGTTTTGAGTGAAATTTACTTGGAAAGATATTGCAATGATTATTTAATTCATCTATGATCAACGTGTGTTGTGTTTTATGATCGGTAATTCTTTCACTTTTGAGTAGTGTCTTAACTGTGAAGAAAAGTTCTGCATCCACTTAACTACCCTTTCTCTTTGAATTTGAAGTTAATTATTGACATAATGACATTGGTTAAGGAAACAAATTTAGAAAGTACTAATTGGGGATATTAAATTTTCCTCAAAAGTTCCTTTACTCAAAACTAGTAAAGTTGGGACCAGGTTTCTGTGTAGTTGAAAAGCAGTGCAGCAGTGCAGTCAGCATGCTCAAGGCCGTCCGATCAAGACCACATGGTCCAGATTTGAACCTCAGAATTTTATATTAAACAAACATAAAAACAGTCTTGATATCTGAACTGTCTGATTCTGATTGGGCGGTTCTAAGGTGCTGACTGCATACAATCATATGACTGCACCTAATCCAATTCCGCCAAGTTGATATTGTGTGTGGAGTGGAAAAGAGATGTTCTTTACTATTTGAATAAATCAGCAATCCGAAAAATGCCAGAATGTATGCACTGAATTTAAGTCCAACTTAACTACAAATCCTTAGGTTTTAATCCCCTTTTATACTTTTTATTCAGGTTCTTTTTTCTATGTATAAGTTTATTAGAAAATTTCCACTTTTTCAGTAACCTTAATGATTGAGAGATATCAAAAATCATAAATGTGAGGTAACCTTGTCTGATATGTCTCAGTTTTTTCCCAAACAACATATTTGGACATTTTGGAAGGTGAAGTCTTCCTCTATGGTAAACACAGACACGCTTGGACTACAATCTTAGGCTTTGTTTGGGAATTTGGAGGGGAGGGGAAGGGAGGGCTTTGGAAGGTGAGAAATATAGGGGAAAGTAGATAAATCTTTCTCATTTTTGGGAAGAGTATTAATTTTAGAGAATGATATATTTTTTTCTGGTAAGTTATGCTGTTCAATGTGGCAGTGTCTGTTAGGATCTCAAATGAGAACGTAGGCCCAATGGTAAATTGGCTACCTAGTTGCACAAGTCCATTAGGTGGAGAGTGATGTTATCAAAACGAGTCATGCTATTTGTTACAGATCTTGTTAGAAACGAAAGACAAGAATCAATACGTATGAATGTGTTAAAAAATATTGACACTATTAATCTCTTTTTTGGCGGAATTCACGGGCTTAGTGGGTGTAAAGAGCGGTAGAGATTAGTTCGTACTATACTTGTGTTGACAGTTTTGTAAAAATAAGCATTTCTCTATCAAAATATAGGAAAGGATAGGGAATAATATGATGTGGTAGGGAGCGAGGGTGAGCAAATGGTGTGACCAATTCTGTTATAAGAGGGAGAAAGGGAGAGAGGGAAGGGAGGGCATTGGATATTTTTGCAGTTAGTAACCGTTTGGGTTGGGCAGAGAGTGTTTCATCTCTTCTGCGAGGAGCATTTGATCTGGGATTACACGGGTTTATCTTCTATAATATCTTCTTTTTCGTCAATAATACAATTTCATTTTCTCTCTTAATTGTGGTTCCTAAGTTTCTTTTGTTCTTGTAGCAAACAAATACCGCAGAGATGTTAGATGAGGCGGTAGCTTATGTCAAGTTTCTACAGAATCAAATTGAGGTAATCTTTTGTGTGTGACTAAATTTATGCTTGTCATTTGGTATTCGGTACTCTCTGCATTTTGTCACGCACTAAGTTGTTGACTAATCTTGCATGAATTGATACATTACAGGAACTATCAGAACAGCAAAGGAGGTGTAAATGCACGATTCCCGAGTAA
Protein sequence

>MS.gene48613.t1

MQPVSGGGGGLTRFNSTPASWFESFILKEEDEVDERQQDHNLSFTQLLSNNNVAAGHGPGPSTPESHPYLSDFYSSPLTPTSVNVANNPFTQGLEDSGIAIDLKMDKILEGSVPCKIRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQIEELSEQQRRCKCTIPE