AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49108

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49108.t1 MTR_1g100970 97.318 895 24 0 19 913 5 899 0.0 1803
MS.gene49108.t1 MTR_1g100970 97.528 890 22 0 24 913 90 979 0.0 1798
MS.gene49108.t1 MTR_1g100970 96.662 689 23 0 225 913 3 691 0.0 1377
MS.gene49108.t1 MTR_0022s0430 70.983 641 159 6 9 625 55 692 0.0 906
MS.gene49108.t1 MTR_0022s0430 55.204 221 83 4 693 913 653 857 1.19e-58 216
MS.gene49108.t1 MTR_0022s0430 74.310 580 130 4 62 625 1 577 0.0 874
MS.gene49108.t1 MTR_0022s0430 55.204 221 83 4 693 913 538 742 1.93e-59 217
MS.gene49108.t1 MTR_3g115400 42.730 564 281 12 58 601 139 680 4.46e-137 432
MS.gene49108.t1 MTR_3g115400 45.946 74 39 1 820 892 818 891 1.97e-12 71.6
MS.gene49108.t1 MTR_2g099350 39.469 603 317 15 47 630 167 740 6.99e-119 385
MS.gene49108.t1 MTR_2g099350 45.745 94 50 1 818 911 865 957 1.51e-17 88.6
MS.gene49108.t1 MTR_4g068000 40.374 535 279 13 58 579 147 654 1.86e-114 372
MS.gene49108.t1 MTR_4g068000 45.122 82 44 1 819 900 826 906 1.63e-15 81.6
MS.gene49108.t1 MTR_5g099060 35.135 370 180 9 58 412 126 450 1.07e-55 208
MS.gene49108.t1 MTR_5g099060 61.111 108 35 1 498 605 607 707 8.49e-32 134
MS.gene49108.t1 MTR_2g040490 84.000 75 12 0 588 662 39 113 4.18e-35 129
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49108.t1 AT4G24020 56.955 913 303 20 25 913 112 958 0.0 926
MS.gene49108.t1 AT1G64530 64.052 612 195 10 48 638 94 701 0.0 779
MS.gene49108.t1 AT1G64530 58.586 99 38 2 816 913 740 836 4.68e-28 122
MS.gene49108.t1 AT4G24020 54.032 744 254 19 192 913 1 678 0.0 692
MS.gene49108.t1 AT1G64530 62.454 546 181 9 113 638 5 546 0.0 677
MS.gene49108.t1 AT1G64530 58.586 99 38 2 816 913 585 681 4.21e-28 121
MS.gene49108.t1 AT1G76350 43.717 565 278 12 54 604 103 641 2.61e-138 432
MS.gene49108.t1 AT1G76350 35.238 105 51 2 789 892 698 786 2.30e-12 71.6
MS.gene49108.t1 AT1G76350 43.717 565 278 12 54 604 103 641 2.61e-138 432
MS.gene49108.t1 AT1G76350 35.238 105 51 2 789 892 698 786 2.30e-12 71.6
MS.gene49108.t1 AT1G76350 43.717 565 278 12 54 604 103 641 2.61e-138 432
MS.gene49108.t1 AT1G76350 35.238 105 51 2 789 892 698 786 2.30e-12 71.6
MS.gene49108.t1 AT1G76350 43.717 565 278 12 54 604 103 641 2.61e-138 432
MS.gene49108.t1 AT1G76350 35.238 105 51 2 789 892 698 786 2.30e-12 71.6
MS.gene49108.t1 AT1G20640 42.124 565 299 8 54 602 101 653 5.92e-130 412
MS.gene49108.t1 AT1G20640 40.000 80 46 2 820 898 747 825 6.59e-11 67.0
MS.gene49108.t1 AT1G20640 42.124 565 299 8 54 602 101 653 5.92e-130 412
MS.gene49108.t1 AT1G20640 40.000 80 46 2 820 898 747 825 6.59e-11 67.0
MS.gene49108.t1 AT1G20640 42.124 565 299 8 54 602 101 653 5.92e-130 412
MS.gene49108.t1 AT1G20640 40.000 80 46 2 820 898 747 825 6.59e-11 67.0
MS.gene49108.t1 AT2G17150 39.799 598 292 15 58 607 124 701 4.78e-124 398
MS.gene49108.t1 AT2G17150 41.860 86 46 2 801 885 798 880 1.10e-13 75.9
MS.gene49108.t1 AT2G17150 39.799 598 292 15 58 607 124 701 4.78e-124 398
MS.gene49108.t1 AT2G17150 41.860 86 46 2 801 885 798 880 1.10e-13 75.9
MS.gene49108.t1 AT3G59580 39.548 531 287 9 58 581 106 609 4.28e-116 376
MS.gene49108.t1 AT3G59580 42.857 98 53 3 817 912 792 888 4.77e-16 83.6
MS.gene49108.t1 AT3G59580 39.548 531 287 9 58 581 106 609 4.28e-116 376
MS.gene49108.t1 AT3G59580 42.857 98 53 3 817 912 792 888 4.77e-16 83.6
MS.gene49108.t1 AT3G59580 39.548 531 287 9 58 581 106 609 4.28e-116 376
MS.gene49108.t1 AT3G59580 42.857 98 53 3 817 912 792 888 4.77e-16 83.6
MS.gene49108.t1 AT2G43500 39.089 527 291 7 58 580 163 663 1.47e-115 376
MS.gene49108.t1 AT2G43500 43.750 96 53 1 817 912 834 928 5.79e-19 93.2
MS.gene49108.t1 AT2G43500 39.089 527 291 7 58 580 163 663 1.47e-115 376
MS.gene49108.t1 AT2G43500 43.750 96 53 1 817 912 834 928 5.79e-19 93.2
MS.gene49108.t1 AT2G43500 39.089 527 291 7 58 580 163 663 1.47e-115 376
MS.gene49108.t1 AT2G43500 43.750 96 53 1 817 912 834 928 5.79e-19 93.2
MS.gene49108.t1 AT2G43500 39.089 527 291 7 58 580 163 663 1.47e-115 376
MS.gene49108.t1 AT2G43500 43.750 96 53 1 817 912 834 928 5.79e-19 93.2
MS.gene49108.t1 AT2G43500 39.089 527 291 7 58 580 163 663 1.47e-115 376
MS.gene49108.t1 AT2G43500 43.750 96 53 1 817 912 834 928 5.79e-19 93.2
MS.gene49108.t1 AT2G43500 39.089 527 291 7 58 580 163 663 1.47e-115 376
MS.gene49108.t1 AT2G43500 43.750 96 53 1 817 912 834 928 5.79e-19 93.2
MS.gene49108.t1 AT2G43500 39.089 527 291 7 58 580 163 663 1.47e-115 376
MS.gene49108.t1 AT2G43500 43.750 96 53 1 817 912 834 928 5.79e-19 93.2
MS.gene49108.t1 AT2G43500 39.089 527 291 7 58 580 163 663 1.47e-115 376
MS.gene49108.t1 AT2G43500 43.750 96 53 1 817 912 834 928 5.79e-19 93.2
MS.gene49108.t1 AT2G43500 38.333 540 290 8 58 580 163 676 2.77e-112 367
MS.gene49108.t1 AT2G43500 43.750 96 53 1 817 912 847 941 5.70e-19 93.2
MS.gene49108.t1 AT2G43500 38.333 540 290 8 58 580 163 676 2.77e-112 367
MS.gene49108.t1 AT2G43500 43.750 96 53 1 817 912 847 941 5.70e-19 93.2
MS.gene49108.t1 AT2G43500 38.148 540 291 9 58 580 163 676 6.61e-111 363
MS.gene49108.t1 AT2G43500 43.750 96 53 1 817 912 847 941 6.27e-19 92.8
MS.gene49108.t1 AT4G38340 35.985 528 265 11 58 581 43 501 2.55e-94 313
MS.gene49108.t1 AT4G38340 37.755 98 55 2 804 898 592 686 8.80e-15 79.3
MS.gene49108.t1 AT2G17150 36.750 517 269 13 58 529 124 627 8.26e-94 310
MS.gene49108.t1 AT2G17150 36.923 520 267 14 58 529 124 630 1.95e-93 309
MS.gene49108.t1 AT2G17150 36.923 520 267 14 58 529 124 630 1.95e-93 309
MS.gene49108.t1 AT4G38340 35.795 528 266 12 58 581 114 572 2.93e-93 311
MS.gene49108.t1 AT4G38340 37.755 98 55 2 804 898 663 757 1.04e-14 79.0
MS.gene49108.t1 AT4G35270 40.984 366 202 4 58 419 153 508 7.58e-86 296
MS.gene49108.t1 AT4G35270 60.345 116 39 1 494 609 635 743 5.70e-35 144
MS.gene49108.t1 AT4G35270 42.105 95 52 3 820 912 865 958 3.65e-15 80.9
MS.gene49108.t1 AT4G35270 40.984 366 202 4 58 419 153 508 7.58e-86 296
MS.gene49108.t1 AT4G35270 60.345 116 39 1 494 609 635 743 5.70e-35 144
MS.gene49108.t1 AT4G35270 42.105 95 52 3 820 912 865 958 3.65e-15 80.9
MS.gene49108.t1 AT4G35270 40.984 366 202 4 58 419 153 508 7.58e-86 296
MS.gene49108.t1 AT4G35270 60.345 116 39 1 494 609 635 743 5.70e-35 144
MS.gene49108.t1 AT4G35270 42.105 95 52 3 820 912 865 958 3.65e-15 80.9
MS.gene49108.t1 AT4G35270 40.984 366 202 4 58 419 153 508 7.58e-86 296
MS.gene49108.t1 AT4G35270 60.345 116 39 1 494 609 635 743 5.70e-35 144
MS.gene49108.t1 AT4G35270 42.105 95 52 3 820 912 865 958 3.65e-15 80.9
MS.gene49108.t1 AT2G17150 37.716 464 222 14 191 607 3 446 8.32e-78 266
MS.gene49108.t1 AT2G17150 41.860 86 46 2 801 885 543 625 8.34e-14 75.9

Find 219 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGCCACCAATAGAAAATT+TGG 0.126044 1.3:-69112690 MS.gene49108:CDS
AACCTCAAGTTTCAATCTTT+TGG 0.135797 1.3:+69109482 None:intergenic
ATATCGTAGATGCTCATTTA+TGG 0.198226 1.3:-69111461 MS.gene49108:CDS
GTTCATTATGCTCTCATGTT+TGG 0.230421 1.3:-69111309 MS.gene49108:CDS
TTCAGTAGCTGAGGCCATTT+TGG 0.234654 1.3:-69109721 MS.gene49108:CDS
GAGAAGATATCATAAGGTTT+AGG 0.254091 1.3:-69109548 MS.gene49108:CDS
CTGTTTCATTGTTGACAATA+TGG 0.260307 1.3:+69111164 None:intergenic
ACCCGATGCCTCACCAAATA+TGG 0.272048 1.3:-69111001 MS.gene49108:CDS
CTTGAGAAAGAAGTGATTAA+TGG 0.295335 1.3:-69110083 MS.gene49108:CDS
TTCATTATGCTCTCATGTTT+GGG 0.297926 1.3:-69111308 MS.gene49108:CDS
CTGTAGGCATAGGAGTGTTT+TGG 0.304108 1.3:-69111574 MS.gene49108:CDS
CCTTGCTGGCTGGACTTATT+CGG 0.317789 1.3:+69110230 None:intergenic
AATGAAGACTGTAACTATTA+AGG 0.320892 1.3:-69109580 MS.gene49108:CDS
TGGTAAAGGCGTGACTATTC+AGG 0.321308 1.3:-69110063 MS.gene49108:CDS
AAGTTGTTACCACAAGCTTC+TGG 0.322668 1.3:+69109687 None:intergenic
TATCGTAGATGCTCATTTAT+GGG 0.324285 1.3:-69111460 MS.gene49108:CDS
GAATGTATTGGCTCAGGTTT+GGG 0.327805 1.3:-69112600 MS.gene49108:CDS
GGAAGCTCCTGTGAGAGTTC+AGG 0.336945 1.3:-69109309 MS.gene49108:CDS
ATGATATCAATGCATTGTTT+AGG 0.337373 1.3:+69109639 None:intergenic
GCCTACAGGGAACCCATGTT+TGG 0.338019 1.3:+69111589 None:intergenic
AAGCAACATAATCCGGGTTT+TGG 0.339808 1.3:-69109355 MS.gene49108:CDS
GATTTAATAGATTGAGCAAT+AGG 0.344298 1.3:+69111033 None:intergenic
GTTTGTTTCTGATACTTTAG+AGG 0.346300 1.3:+69110154 None:intergenic
CACAACATGTTGTTCATTGT+TGG 0.348163 1.3:+69109905 None:intergenic
AGCATGTGATGCAGACCTTC+AGG 0.350853 1.3:-69109409 MS.gene49108:CDS
TATTGCTTAACGAGCCTTGC+TGG 0.353239 1.3:+69110216 None:intergenic
GGCGTGACTATTCAGGAAAT+TGG 0.356009 1.3:-69110056 MS.gene49108:CDS
TTTATGGTTGGAATTTCAAT+TGG 0.358415 1.3:+69109945 None:intergenic
AAATTGGAAAGGACCGAAAA+AGG 0.359121 1.3:-69110040 MS.gene49108:CDS
GCTTGTGGTAACAACTTTCC+AGG 0.361722 1.3:-69109681 MS.gene49108:CDS
AGAAGATATCATAAGGTTTA+GGG 0.363466 1.3:-69109547 MS.gene49108:CDS
CAGATACGCTTCATTGTAGT+AGG 0.378516 1.3:+69110428 None:intergenic
TGAATGTATTGGCTCAGGTT+TGG 0.382919 1.3:-69112601 MS.gene49108:CDS
TGGAGCCAGATCCTCCAAAA+TGG 0.387883 1.3:+69109707 None:intergenic
TAACACGTTTGAGCTTAGAT+AGG 0.389963 1.3:+69110348 None:intergenic
CTCCATATTTGGTGAGGCAT+CGG 0.392508 1.3:+69110999 None:intergenic
CGGTATGTACTTACAACTTC+AGG 0.393209 1.3:-69112557 MS.gene49108:CDS
CAACATGGTCAAGGTGTTGC+GGG 0.395005 1.3:-69111405 MS.gene49108:CDS
CCGGAGGAAGCAACATAATC+CGG 0.406793 1.3:-69109362 MS.gene49108:CDS
TTATGGTTGGAATTTCAATT+GGG 0.410388 1.3:+69109946 None:intergenic
TTAGAATAGTACAGAACATT+GGG 0.411506 1.3:+69112386 None:intergenic
CTGGACTTATTCGGAGTAGA+AGG 0.413845 1.3:+69110239 None:intergenic
CTTTCCAGGTTCATCACATC+TGG 0.413983 1.3:-69109667 MS.gene49108:CDS
GATGGAACTCTAGGACTTCC+TGG 0.418289 1.3:-69112443 MS.gene49108:CDS
AAATATGGAGGAGGAGGAGG+AGG 0.419910 1.3:-69110986 MS.gene49108:CDS
TGGTCAAGGTGTTGCGGGGA+GGG 0.420611 1.3:-69111400 MS.gene49108:CDS
CCGGATTATGTTGCTTCCTC+CGG 0.426310 1.3:+69109362 None:intergenic
TAAATGAGCATCTACGATAT+AGG 0.426423 1.3:+69111464 None:intergenic
TTTGGTGAGGCATCGGGTCT+AGG 0.427870 1.3:+69111006 None:intergenic
GTTGATCCGATGTCTACCTT+AGG 0.428534 1.3:-69110913 MS.gene49108:CDS
CCTTGCAGGCAGTAAATTTG+AGG 0.428965 1.3:-69112021 MS.gene49108:intron
TCCATATTTGGTGAGGCATC+GGG 0.432185 1.3:+69111000 None:intergenic
GAAGCTCCTGTGAGAGTTCA+GGG 0.444633 1.3:-69109308 MS.gene49108:CDS
CATGAACAGAAGACGCTGTT+GGG 0.447455 1.3:-69111189 MS.gene49108:CDS
GGATGGATATTGTGTAATCA+AGG 0.447561 1.3:-69112669 MS.gene49108:CDS
GCAGAACTTCAAGAGCCGTT+TGG 0.448769 1.3:-69109798 MS.gene49108:CDS
TCAGGAAATGAACTAACAAT+TGG 0.451708 1.3:+69110263 None:intergenic
CCACAGAAAACATGTACATC+AGG 0.453576 1.3:+69112477 None:intergenic
CAGAGTCTTAACATTGCTGC+TGG 0.455084 1.3:-69111135 MS.gene49108:CDS
TTGTTGTCGTCTTTCTCCAC+CGG 0.456133 1.3:+69112731 None:intergenic
AAGTTCTGCTATCACATTGT+CGG 0.456387 1.3:+69109812 None:intergenic
AGGGCGTCAAAATGCATTAT+CGG 0.458489 1.3:-69111664 MS.gene49108:CDS
ACCAAATATGGAGGAGGAGG+AGG 0.458759 1.3:-69110989 MS.gene49108:CDS
TTGAGGGGATCGCCAGAGTC+GGG 0.458933 1.3:-69109882 MS.gene49108:CDS
AGTTCTGCTATCACATTGTC+GGG 0.459703 1.3:+69109813 None:intergenic
CTGCAAGACAGATTACCCTT+TGG 0.463297 1.3:-69111331 MS.gene49108:CDS
CACATTTGATATCAAGTACA+TGG 0.464870 1.3:-69109457 MS.gene49108:CDS
GGAGGAGGAGGGAGTACCAC+AGG 0.466897 1.3:-69110974 MS.gene49108:CDS
CATGACATAACATCAAATCT+TGG 0.469302 1.3:-69109330 MS.gene49108:CDS
AGCAAGGCTCGTTAAGCAAT+AGG 0.473057 1.3:-69110214 MS.gene49108:CDS
GCGTTTGATTTGAATTCTCT+TGG 0.473199 1.3:-69110299 MS.gene49108:CDS
GTCCTTGATCCGCATAGTAA+TGG 0.473816 1.3:-69112524 MS.gene49108:CDS
CTCTTTGAACTGTGGCATTG+TGG 0.474442 1.3:-69109523 MS.gene49108:CDS
TTAAATCAGATTTGCAATGA+AGG 0.476823 1.3:-69111684 MS.gene49108:intron
CACCTGTGAGGAATGGTAAT+CGG 0.477678 1.3:-69112577 MS.gene49108:CDS
CAAACGCTCCTTCAGCGCCT+TGG 0.478043 1.3:+69110315 None:intergenic
ATTATTGAAGCAACTGATGA+AGG 0.480520 1.3:-69111081 MS.gene49108:CDS
CCTTCGTTGCAGTCATGTAT+TGG 0.482068 1.3:-69112290 MS.gene49108:CDS
GCTTAACGAGCCTTGCTGGC+TGG 0.482905 1.3:+69110220 None:intergenic
GGAGAGAACGATGGAACTCT+AGG 0.486383 1.3:-69112452 MS.gene49108:CDS
GTAATCTGTCTTGCAGAACT+TGG 0.486621 1.3:+69111338 None:intergenic
GGTGTTGAACTCGAGGAAAA+TGG 0.487027 1.3:-69111114 MS.gene49108:CDS
AGAACATTGGGAGACCATTC+TGG 0.493005 1.3:+69112398 None:intergenic
TAAATCAGATTTGCAATGAA+GGG 0.493978 1.3:-69111683 MS.gene49108:intron
TTCAGCAGAAACTACCAGAA+TGG 0.494743 1.3:-69112412 MS.gene49108:CDS
ATTAGAATAGTACAGAACAT+TGG 0.496307 1.3:+69112385 None:intergenic
CCTACAGGGAACCCATGTTT+GGG 0.498512 1.3:+69111590 None:intergenic
TGTAATGTTGAGCATGATCT+CGG 0.498840 1.3:+69112348 None:intergenic
TTTCCACGTTTCCTCTCTGA+GGG 0.500087 1.3:+69110871 None:intergenic
TGAACTGAATGTATTGGCTC+AGG 0.500170 1.3:-69112606 MS.gene49108:CDS
ACATGGACGATGATAATGAA+TGG 0.500704 1.3:-69109440 MS.gene49108:CDS
CATATAGAGAAGATATCATA+AGG 0.502450 1.3:-69109554 MS.gene49108:CDS
CCACCAATAGAAAATTTGGA+TGG 0.502580 1.3:-69112686 MS.gene49108:CDS
TTGAGCAATAGGAATAGATT+CGG 0.502794 1.3:+69111044 None:intergenic
TGGCATGAACCATGAGAAGT+AGG 0.511685 1.3:+69109978 None:intergenic
AAAGAAGTGATTAATGGTAA+AGG 0.511717 1.3:-69110077 MS.gene49108:CDS
TTGATCCGATGTCTACCTTA+GGG 0.513112 1.3:-69110912 MS.gene49108:CDS
TTACAACGTTCGTGGAACCT+TGG 0.514560 1.3:-69112330 MS.gene49108:CDS
TCTTTCATCTGAGGCTCTGA+CGG 0.515877 1.3:+69110191 None:intergenic
TGCAACGAAGGTTCAAATAC+AGG 0.517092 1.3:+69112302 None:intergenic
CAAAACACTCCTATGCCTAC+AGG 0.518113 1.3:+69111575 None:intergenic
CTATCACATTGTCGGGCATA+CGG 0.518485 1.3:+69109820 None:intergenic
TCGGGCATACGGTGAGAAGT+TGG 0.519816 1.3:+69109831 None:intergenic
ATTTACCTCTAGCCCAAACA+TGG 0.520347 1.3:-69111602 MS.gene49108:CDS
GGAACCCATGTTTGGGCTAG+AGG 0.520691 1.3:+69111597 None:intergenic
AACAAACATACAGATTGTAA+TGG 0.521216 1.3:-69110138 MS.gene49108:CDS
GATGCTGCAAAGAGCCTTGG+CGG 0.522654 1.3:-69110790 MS.gene49108:intron
AATTCATTCTCTTTCATCTG+AGG 0.523018 1.3:+69110182 None:intergenic
CAGGATCCATCAGAGGTTCA+TGG 0.523226 1.3:-69110955 MS.gene49108:CDS
ATGTATGTTTCAAGATCATC+CGG 0.526490 1.3:-69109381 MS.gene49108:CDS
GCTCAACATTACAACGTTCG+TGG 0.526984 1.3:-69112338 MS.gene49108:CDS
GTCCATTACTATGCGGATCA+AGG 0.527800 1.3:+69112522 None:intergenic
GTCGGCTGCATTCCCGACTC+TGG 0.528364 1.3:+69109870 None:intergenic
ATGTTGAGCATGATCTCGGC+GGG 0.529020 1.3:+69112352 None:intergenic
AAAGATGCTGCAAAGAGCCT+TGG 0.531341 1.3:-69110793 MS.gene49108:CDS
CATGGACGATGATAATGAAT+GGG 0.531492 1.3:-69109439 MS.gene49108:CDS
TCATGAACAGAAGACGCTGT+TGG 0.531663 1.3:-69111190 MS.gene49108:CDS
CGCTTCGTTACTTCAAAGAG+TGG 0.532079 1.3:-69112631 MS.gene49108:CDS
AAAAGATTGAAACTTGAGGT+TGG 0.535106 1.3:-69109480 MS.gene49108:CDS
ATATCAATGCATTGTTTAGG+AGG 0.537877 1.3:+69109642 None:intergenic
GAATCTGTCCAAGGCGCTGA+AGG 0.539465 1.3:-69110323 MS.gene49108:CDS
TTCCAAAAGATTGAAACTTG+AGG 0.540955 1.3:-69109484 MS.gene49108:CDS
AGCGTATCTGCAGGCAGCAT+GGG 0.541320 1.3:-69110415 MS.gene49108:CDS
CCAATACATGACTGCAACGA+AGG 0.542039 1.3:+69112290 None:intergenic
CATGGGTTCCCTGTAGGCAT+AGG 0.542933 1.3:-69111584 MS.gene49108:CDS
GAGGTTCATGGTGAAAATGT+AGG 0.543377 1.3:-69110943 MS.gene49108:CDS
CTCACCAAATATGGAGGAGG+AGG 0.544347 1.3:-69110992 MS.gene49108:CDS
TAAAAGAAACTCAACCTCTA+GGG 0.545210 1.3:+69112199 None:intergenic
AACACGTTTGAGCTTAGATA+GGG 0.545296 1.3:+69110349 None:intergenic
ATCGTAGATGCTCATTTATG+GGG 0.545393 1.3:-69111459 MS.gene49108:CDS
CTACAATGAAGCGTATCTGC+AGG 0.545803 1.3:-69110424 MS.gene49108:CDS
GAACTTCAAGAGCCGTTTGG+AGG 0.546170 1.3:-69109795 MS.gene49108:CDS
GTTTGGAGGATTGCTAATAG+AGG 0.548683 1.3:-69109781 MS.gene49108:CDS
GTGGACTGAACTGAATGTAT+TGG 0.548852 1.3:-69112612 MS.gene49108:CDS
GGAGAGTTTAAAGCATTAGT+CGG 0.550784 1.3:+69109852 None:intergenic
ACAACATGGTCAAGGTGTTG+CGG 0.552963 1.3:-69111406 MS.gene49108:CDS
GTAATGGAAAATCAATTGCT+AGG 0.555652 1.3:-69110122 MS.gene49108:CDS
AAATTCAATAACTGAGAAGC+CGG 0.559695 1.3:-69112750 MS.gene49108:CDS
CCGAATAAGTCCAGCCAGCA+AGG 0.559867 1.3:-69110230 MS.gene49108:CDS
TCTATTAGCAATCCTCCAAA+CGG 0.561122 1.3:+69109783 None:intergenic
AAGCGTATCTGCAGGCAGCA+TGG 0.561590 1.3:-69110416 MS.gene49108:CDS
CTCCTCCTCCATATTTGGTG+AGG 0.561991 1.3:+69110993 None:intergenic
AGCACAAACCCTACTTCTCA+TGG 0.568994 1.3:-69109987 MS.gene49108:CDS
TGAACAACATGTTGTGTTGA+GGG 0.569993 1.3:-69109898 MS.gene49108:CDS
ACATGTTGTTCATTGTTGGA+TGG 0.570109 1.3:+69109909 None:intergenic
TTATTCGGAGTAGAAGGCTC+AGG 0.570221 1.3:+69110245 None:intergenic
GGAGCCAGATGTGATGAACC+TGG 0.570260 1.3:+69109663 None:intergenic
TCTATTGGTGGCAAAAGGGG+TGG 0.571210 1.3:+69112698 None:intergenic
ATGGTCAAGGTGTTGCGGGG+AGG 0.571632 1.3:-69111401 MS.gene49108:CDS
CGGAGGAAGCAACATAATCC+GGG 0.572590 1.3:-69109361 MS.gene49108:CDS
TTCAAATACAGGCAAAGCCA+AGG 0.574356 1.3:+69112313 None:intergenic
ATGAGAGCATAATGAACCAA+AGG 0.574665 1.3:+69111315 None:intergenic
CTATGCGGATCAAGGACAAA+GGG 0.575242 1.3:+69112530 None:intergenic
CCCAAACATGGGTTCCCTGT+AGG 0.575392 1.3:-69111590 MS.gene49108:CDS
AAAATACCTGAGTGAATGGA+TGG 0.576234 1.3:+69111981 None:intergenic
TCACTCCCCTGAACTCTCAC+AGG 0.578779 1.3:+69109302 None:intergenic
ACCTTGTTAATCTTTCGAGA+TGG 0.579070 1.3:+69110380 None:intergenic
AAAATGGCCTCAGCTACTGA+AGG 0.579468 1.3:+69109723 None:intergenic
TTATGTCATGCACCAAAACC+CGG 0.579981 1.3:+69109343 None:intergenic
TGAGAGCATAATGAACCAAA+GGG 0.580200 1.3:+69111316 None:intergenic
GTTGAGGGGATCGCCAGAGT+CGG 0.581271 1.3:-69109883 MS.gene49108:CDS
TTTGGACCATCCATTCACTC+AGG 0.581838 1.3:-69111987 MS.gene49108:intron
CTCAGGTTTGGGCACCTGTG+AGG 0.583880 1.3:-69112589 MS.gene49108:CDS
AAACATACATGCACTCCTGA+AGG 0.585860 1.3:+69109394 None:intergenic
TGCCTCACCAAATATGGAGG+AGG 0.587748 1.3:-69110995 MS.gene49108:CDS
GTTTGGGCACCTGTGAGGAA+TGG 0.588324 1.3:-69112584 MS.gene49108:CDS
AAAACACTCCTATGCCTACA+GGG 0.592526 1.3:+69111576 None:intergenic
ACTTCTCATGGTTCATGCCA+CGG 0.596610 1.3:-69109975 MS.gene49108:CDS
AAAATCAATTGCTAGGAGGA+AGG 0.596853 1.3:-69110115 MS.gene49108:CDS
TATGGTTGGAATTTCAATTG+GGG 0.600606 1.3:+69109947 None:intergenic
TTATTCCCTAAGGTAGACAT+CGG 0.604395 1.3:+69110907 None:intergenic
TGCTGCTGGTGTTGAACTCG+AGG 0.610461 1.3:-69111121 MS.gene49108:CDS
CGTGTTATTGAATCTGTCCA+AGG 0.611341 1.3:-69110332 MS.gene49108:CDS
GTTTGAGCTTAGATAGGGAA+CGG 0.611978 1.3:+69110354 None:intergenic
GGCAGCATGGGATATCTCGT+TGG 0.612803 1.3:-69110403 MS.gene49108:CDS
TTTAGGGTCTCTTTGAACTG+TGG 0.613295 1.3:-69109531 MS.gene49108:CDS
TCATGAAATTCAGTAATCCC+AGG 0.614579 1.3:+69111207 None:intergenic
ATGGTTGGAATTTCAATTGG+GGG 0.615940 1.3:+69109948 None:intergenic
CACAGAAAACATGTACATCA+GGG 0.616371 1.3:+69112478 None:intergenic
GACTATTCAGGAAATTGGAA+AGG 0.619669 1.3:-69110051 MS.gene49108:CDS
AGAGTATGAACGTACCGCCA+AGG 0.629334 1.3:+69110776 None:intergenic
TACCGATTACCATTCCTCAC+AGG 0.629926 1.3:+69112575 None:intergenic
AAAGATTAACTATGCTCCTG+AGG 0.633444 1.3:-69112240 MS.gene49108:CDS
TTTGTGCCCTTCAGTAGCTG+AGG 0.634116 1.3:-69109730 MS.gene49108:CDS
TTCAATAACTGAGAAGCCGG+TGG 0.635214 1.3:-69112747 MS.gene49108:CDS
GGCATGAACCATGAGAAGTA+GGG 0.635585 1.3:+69109979 None:intergenic
AGATACGCTTCATTGTAGTA+GGG 0.641314 1.3:+69110429 None:intergenic
AGTGTGCATGTCTACAACTG+AGG 0.643299 1.3:-69111493 MS.gene49108:CDS
ACTATGCGGATCAAGGACAA+AGG 0.647160 1.3:+69112529 None:intergenic
TCATTGTTGGATGGAATGAA+CGG 0.648544 1.3:+69109918 None:intergenic
CGATGCCTCACCAAATATGG+AGG 0.650921 1.3:-69110998 MS.gene49108:CDS
AAAAGGAATAGAACTAGGAG+TGG 0.652567 1.3:-69110023 MS.gene49108:CDS
TTTACCTCTAGCCCAAACAT+GGG 0.653751 1.3:-69111601 MS.gene49108:CDS
ATGAACAACATGTTGTGTTG+AGG 0.654614 1.3:-69109899 MS.gene49108:CDS
TGGACTCAATCAGTATAGAA+CGG 0.656345 1.3:-69112504 MS.gene49108:CDS
AAATGGCCTCAGCTACTGAA+GGG 0.658026 1.3:+69109724 None:intergenic
GGTGAGGCATCGGGTCTAGG+TGG 0.659977 1.3:+69111009 None:intergenic
ATGGAAAATCAATTGCTAGG+AGG 0.664194 1.3:-69110119 MS.gene49108:CDS
AAACCCTCAGAGAGGAAACG+TGG 0.667434 1.3:-69110874 MS.gene49108:CDS
GTGCATGTCTACAACTGAGG+CGG 0.669875 1.3:-69111490 MS.gene49108:CDS
AACATGGTCAAGGTGTTGCG+GGG 0.672343 1.3:-69111404 MS.gene49108:CDS
GTCGAACATCACTTACAACA+TGG 0.677843 1.3:-69111420 MS.gene49108:CDS
GATCTTAGAGATATTGACAG+TGG 0.683127 1.3:-69111640 MS.gene49108:CDS
AAAACATCATTAGAAGAACA+TGG 0.686020 1.3:-69113642 MS.gene49108:intron
GCCATCTCGAAAGATTAACA+AGG 0.686233 1.3:-69110381 MS.gene49108:CDS
GATCTGGCTCCAGAAGCTTG+TGG 0.687276 1.3:-69109696 MS.gene49108:CDS
AATGTTGAGCATGATCTCGG+CGG 0.687474 1.3:+69112351 None:intergenic
CATCACTTACAACATGGTCA+AGG 0.693887 1.3:-69111414 MS.gene49108:CDS
TCTGTGGATGGAGAGAACGA+TGG 0.695263 1.3:-69112461 MS.gene49108:CDS
AGTACCACAGGATCCATCAG+AGG 0.699060 1.3:-69110962 MS.gene49108:CDS
ACATAAAGAAACCCTCAGAG+AGG 0.705928 1.3:-69110882 MS.gene49108:CDS
TGAACCTCTGATGGATCCTG+TGG 0.708138 1.3:+69110958 None:intergenic
AAGCTCCTGTGAGAGTTCAG+GGG 0.712104 1.3:-69109307 MS.gene49108:CDS
GGATTGCTAATAGAGGACGC+TGG 0.717922 1.3:-69109774 MS.gene49108:CDS
TGTTGAGCATGATCTCGGCG+GGG 0.718991 1.3:+69112353 None:intergenic
TATGTTTCAAGATCATCCGG+AGG 0.731584 1.3:-69109378 MS.gene49108:CDS
GAACAACATGTTGTGTTGAG+GGG 0.732713 1.3:-69109897 MS.gene49108:CDS
TGATTGAGTCCATTACTATG+CGG 0.743496 1.3:+69112515 None:intergenic
TGAAATTCAGTAATCCCAGG+AGG 0.744471 1.3:+69111210 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATTATAAAATGTTAATAT+TGG + chr1.3:69112300-69112319 None:intergenic 10.0%
!!! TTTTTATTTTTAGAGTTTAA+TGG - chr1.3:69111027-69111046 MS.gene49108:CDS 10.0%
!! ATAAACTCATTATACATTAA+GGG + chr1.3:69109750-69109769 None:intergenic 15.0%
!! TAAAAATAATTGGAAAATAC+TGG - chr1.3:69111139-69111158 MS.gene49108:CDS 15.0%
!!! AACTGCATTTTAAAAATAAT+TGG - chr1.3:69111129-69111148 MS.gene49108:CDS 15.0%
!! ATAAGAAAACCATAAAACTT+AGG + chr1.3:69110830-69110849 None:intergenic 20.0%
!! ATACATGATAAAAACAAATC+AGG + chr1.3:69111196-69111215 None:intergenic 20.0%
!! CATAAACTCATTATACATTA+AGG + chr1.3:69109751-69109770 None:intergenic 20.0%
!! TGATTCTTTGAGTATTTATA+AGG - chr1.3:69110049-69110068 MS.gene49108:CDS 20.0%
!!! ATTTTATACCAAGTTTTCAA+TGG - chr1.3:69110887-69110906 MS.gene49108:CDS 20.0%
!!! TGCTTTGTTTGATTTTATAA+TGG - chr1.3:69109692-69109711 MS.gene49108:CDS 20.0%
!!! TTATTTTTAGAGTTTAATGG+AGG - chr1.3:69111030-69111049 MS.gene49108:CDS 20.0%
!!! TTTAAAATGCAGTTACAAAT+AGG + chr1.3:69111123-69111142 None:intergenic 20.0%
!!! TTTTATGGTTTTCTTATGTT+TGG - chr1.3:69110833-69110852 MS.gene49108:CDS 20.0%
! AAAACATCATTAGAAGAACA+TGG - chr1.3:69109347-69109366 MS.gene49108:CDS 25.0%
! AAAGAAGTGATTAATGGTAA+AGG - chr1.3:69112912-69112931 MS.gene49108:intron 25.0%
! AACAAACATACAGATTGTAA+TGG - chr1.3:69112851-69112870 MS.gene49108:intron 25.0%
! AATAAAAATACCTGAGTGAA+TGG + chr1.3:69111015-69111034 None:intergenic 25.0%
! AATGAAGACTGTAACTATTA+AGG - chr1.3:69113409-69113428 MS.gene49108:intron 25.0%
! AGAAGATATCATAAGGTTTA+GGG - chr1.3:69113442-69113461 MS.gene49108:intron 25.0%
! ATCTAGATTTAGAAACATCA+TGG - chr1.3:69109387-69109406 MS.gene49108:CDS 25.0%
! ATGATATCAATGCATTGTTT+AGG + chr1.3:69113353-69113372 None:intergenic 25.0%
! ATTAGAATAGTACAGAACAT+TGG + chr1.3:69110607-69110626 None:intergenic 25.0%
! ATTATCTAGATATAACAGAC+TGG + chr1.3:69111227-69111246 None:intergenic 25.0%
! CAACATTCACAAGTAAAATT+AGG + chr1.3:69109778-69109797 None:intergenic 25.0%
! CATATAGAGAAGATATCATA+AGG - chr1.3:69113435-69113454 MS.gene49108:intron 25.0%
! GAGATGTTTGAAAACAAAAA+AGG + chr1.3:69109455-69109474 None:intergenic 25.0%
! GATTTAATAGATTGAGCAAT+AGG + chr1.3:69111959-69111978 None:intergenic 25.0%
! TAAATCAGATTTGCAATGAA+GGG - chr1.3:69111306-69111325 MS.gene49108:CDS 25.0%
! TAATCTTCAAATACTGTAGT+AGG + chr1.3:69109850-69109869 None:intergenic 25.0%
! TTAAATCAGATTTGCAATGA+AGG - chr1.3:69111305-69111324 MS.gene49108:CDS 25.0%
! TTAGAATAGTACAGAACATT+GGG + chr1.3:69110606-69110625 None:intergenic 25.0%
! TTATCTAGATATAACAGACT+GGG + chr1.3:69111226-69111245 None:intergenic 25.0%
! TTATGGTTGGAATTTCAATT+GGG + chr1.3:69113046-69113065 None:intergenic 25.0%
! TTTATGGTTGGAATTTCAAT+TGG + chr1.3:69113047-69113066 None:intergenic 25.0%
!! CTAATTTTACTTGTGAATGT+TGG - chr1.3:69109776-69109795 MS.gene49108:CDS 25.0%
!! TATCCATCCAAATTTTCTAT+TGG + chr1.3:69110309-69110328 None:intergenic 25.0%
!!! CTTTATGTTTTTATTCCCTA+AGG + chr1.3:69112095-69112114 None:intergenic 25.0%
!!! TCTAATGATGTTTTTGTCTT+GGG + chr1.3:69109341-69109360 None:intergenic 25.0%
!!! TTCTAATGATGTTTTTGTCT+TGG + chr1.3:69109342-69109361 None:intergenic 25.0%
AAAAGATTGAAACTTGAGGT+TGG - chr1.3:69113509-69113528 MS.gene49108:intron 30.0%
AAATTCAATAACTGAGAAGC+CGG - chr1.3:69110239-69110258 MS.gene49108:CDS 30.0%
AATTCATTCTCTTTCATCTG+AGG + chr1.3:69112810-69112829 None:intergenic 30.0%
ACTGGATTATGAAAACTTCA+CGG + chr1.3:69110129-69110148 None:intergenic 30.0%
ATATCAATGCATTGTTTAGG+AGG + chr1.3:69113350-69113369 None:intergenic 30.0%
ATATCGTAGATGCTCATTTA+TGG - chr1.3:69111528-69111547 MS.gene49108:CDS 30.0%
ATGTAGCATGTACTTGTATA+AGG + chr1.3:69110020-69110039 None:intergenic 30.0%
ATGTATGTTTCAAGATCATC+CGG - chr1.3:69113608-69113627 MS.gene49108:intron 30.0%
ATTATTGAAGCAACTGATGA+AGG - chr1.3:69111908-69111927 MS.gene49108:intron 30.0%
CACATTTGATATCAAGTACA+TGG - chr1.3:69113532-69113551 MS.gene49108:intron 30.0%
CATGACATAACATCAAATCT+TGG - chr1.3:69113659-69113678 MS.gene49108:CDS 30.0%
CGATTACGTAATACATTCTT+TGG + chr1.3:69112414-69112433 None:intergenic 30.0%
CTGTTTCATTGTTGACAATA+TGG + chr1.3:69111828-69111847 None:intergenic 30.0%
CTTGAGAAAGAAGTGATTAA+TGG - chr1.3:69112906-69112925 MS.gene49108:intron 30.0%
GAAAACAAAAAAGGTGACAT+GGG + chr1.3:69109446-69109465 None:intergenic 30.0%
GAAAACCATAAAACTTAGGA+TGG + chr1.3:69110826-69110845 None:intergenic 30.0%
GAGAAGATATCATAAGGTTT+AGG - chr1.3:69113441-69113460 MS.gene49108:intron 30.0%
TAAAAGAAACTCAACCTCTA+GGG + chr1.3:69110793-69110812 None:intergenic 30.0%
TAAATGAGCATCTACGATAT+AGG + chr1.3:69111528-69111547 None:intergenic 30.0%
TATCGTAGATGCTCATTTAT+GGG - chr1.3:69111529-69111548 MS.gene49108:CDS 30.0%
TATGGTTGGAATTTCAATTG+GGG + chr1.3:69113045-69113064 None:intergenic 30.0%
TCAGGAAATGAACTAACAAT+TGG + chr1.3:69112729-69112748 None:intergenic 30.0%
TGAAAACAAAAAAGGTGACA+TGG + chr1.3:69109447-69109466 None:intergenic 30.0%
TGCGTTGTTAATTATGTAGA+AGG - chr1.3:69109881-69109900 MS.gene49108:CDS 30.0%
TTAAAAGAAACTCAACCTCT+AGG + chr1.3:69110794-69110813 None:intergenic 30.0%
TTCATTATGCTCTCATGTTT+GGG - chr1.3:69111681-69111700 MS.gene49108:intron 30.0%
TTCCAAAAGATTGAAACTTG+AGG - chr1.3:69113505-69113524 MS.gene49108:intron 30.0%
TTGAGCAATAGGAATAGATT+CGG + chr1.3:69111948-69111967 None:intergenic 30.0%
TTTGCCACCAATAGAAAATT+TGG - chr1.3:69110299-69110318 MS.gene49108:CDS 30.0%
! AACCTCAAGTTTCAATCTTT+TGG + chr1.3:69113510-69113529 None:intergenic 30.0%
! AAGTCTTGATTTTCTTCTTC+AGG + chr1.3:69109314-69109333 None:intergenic 30.0%
! CATGTATTTTGCAGTTTATG+TGG - chr1.3:69110170-69110189 MS.gene49108:CDS 30.0%
! GTAATGGAAAATCAATTGCT+AGG - chr1.3:69112867-69112886 MS.gene49108:intron 30.0%
!! AAAAGTTGTTCGAGTTTTGA+TGG - chr1.3:69111458-69111477 MS.gene49108:CDS 30.0%
!! AACTAAAGCTACTGTTTTTC+AGG - chr1.3:69110210-69110229 MS.gene49108:CDS 30.0%
!! AATTTTCTATTGGTGGCAAA+AGG + chr1.3:69110299-69110318 None:intergenic 30.0%
!! ATTTTCTATTGGTGGCAAAA+GGG + chr1.3:69110298-69110317 None:intergenic 30.0%
!! GTTTGTTTCTGATACTTTAG+AGG + chr1.3:69112838-69112857 None:intergenic 30.0%
!! TAGCTTTAACACAAACTTCT+TGG - chr1.3:69112514-69112533 MS.gene49108:CDS 30.0%
!! TTCTACAACGTTATTTTGCT+GGG - chr1.3:69112167-69112186 MS.gene49108:intron 30.0%
!! TTTACAAATTTGCTGCTATC+TGG - chr1.3:69112375-69112394 MS.gene49108:CDS 30.0%
!!! ATTTCTTTTCTAGCTGCAAA+AGG + chr1.3:69113392-69113411 None:intergenic 30.0%
!!! TCCTAGTTCTATTCCTTTTT+CGG + chr1.3:69112965-69112984 None:intergenic 30.0%
AAAAGGAATAGAACTAGGAG+TGG - chr1.3:69112966-69112985 MS.gene49108:intron 35.0%
AAAATACCTGAGTGAATGGA+TGG + chr1.3:69111011-69111030 None:intergenic 35.0%
AAAATCAATTGCTAGGAGGA+AGG - chr1.3:69112874-69112893 MS.gene49108:intron 35.0%
AAACCAAAAGCAGATCATTG+AGG + chr1.3:69110948-69110967 None:intergenic 35.0%
AAAGATTAACTATGCTCCTG+AGG - chr1.3:69110749-69110768 MS.gene49108:intron 35.0%
AAATTGGAAAGGACCGAAAA+AGG - chr1.3:69112949-69112968 MS.gene49108:intron 35.0%
AACACGTTTGAGCTTAGATA+GGG + chr1.3:69112643-69112662 None:intergenic 35.0%
AAGTTCTGCTATCACATTGT+CGG + chr1.3:69113180-69113199 None:intergenic 35.0%
AATCTCTGCCATTGAAAACT+TGG + chr1.3:69110898-69110917 None:intergenic 35.0%
ACATACAAGAGAAGATCTTG+TGG + chr1.3:69109556-69109575 None:intergenic 35.0%
ACATGTTGTTCATTGTTGGA+TGG + chr1.3:69113083-69113102 None:intergenic 35.0%
ACCGAAAAAGGAATAGAACT+AGG - chr1.3:69112961-69112980 MS.gene49108:intron 35.0%
ACCTTGTTAATCTTTCGAGA+TGG + chr1.3:69112612-69112631 None:intergenic 35.0%
AGAAGAACATGGTTGTTCTA+TGG - chr1.3:69109358-69109377 MS.gene49108:CDS 35.0%
AGATACGCTTCATTGTAGTA+GGG + chr1.3:69112563-69112582 None:intergenic 35.0%
ATCGTAGATGCTCATTTATG+GGG - chr1.3:69111530-69111549 MS.gene49108:CDS 35.0%
ATGAACAACATGTTGTGTTG+AGG - chr1.3:69113090-69113109 MS.gene49108:intron 35.0%
ATGGAAAATCAATTGCTAGG+AGG - chr1.3:69112870-69112889 MS.gene49108:intron 35.0%
ATGGTTGGAATTTCAATTGG+GGG + chr1.3:69113044-69113063 None:intergenic 35.0%
ATTGAACAGCTGAAGTTTCA+CGG - chr1.3:69109950-69109969 MS.gene49108:CDS 35.0%
CACAACATGTTGTTCATTGT+TGG + chr1.3:69113087-69113106 None:intergenic 35.0%
CACAGAAAACATGTACATCA+GGG + chr1.3:69110514-69110533 None:intergenic 35.0%
CAGCTGTTCAATTTAGAAGA+GGG + chr1.3:69109942-69109961 None:intergenic 35.0%
CATGGGATTATTAGAGAGAA+AGG + chr1.3:69109429-69109448 None:intergenic 35.0%
CATTGCCAAGTTATATCTGT+GGG + chr1.3:69111282-69111301 None:intergenic 35.0%
CCACCAATAGAAAATTTGGA+TGG - chr1.3:69110303-69110322 MS.gene49108:CDS 35.0%
GACTATTCAGGAAATTGGAA+AGG - chr1.3:69112938-69112957 MS.gene49108:intron 35.0%
GATCTTAGAGATATTGACAG+TGG - chr1.3:69111349-69111368 MS.gene49108:CDS 35.0%
GGAAAATACTGGATTCTCAT+TGG - chr1.3:69111150-69111169 MS.gene49108:CDS 35.0%
GGATGGATATTGTGTAATCA+AGG - chr1.3:69110320-69110339 MS.gene49108:CDS 35.0%
GTTCATTATGCTCTCATGTT+TGG - chr1.3:69111680-69111699 MS.gene49108:intron 35.0%
TAACACGTTTGAGCTTAGAT+AGG + chr1.3:69112644-69112663 None:intergenic 35.0%
TCAGCTGTTCAATTTAGAAG+AGG + chr1.3:69109943-69109962 None:intergenic 35.0%
TCATGAAATTCAGTAATCCC+AGG + chr1.3:69111785-69111804 None:intergenic 35.0%
TCATTGTTGGATGGAATGAA+CGG + chr1.3:69113074-69113093 None:intergenic 35.0%
TCTATTAGCAATCCTCCAAA+CGG + chr1.3:69113209-69113228 None:intergenic 35.0%
TGAACAACATGTTGTGTTGA+GGG - chr1.3:69113091-69113110 MS.gene49108:intron 35.0%
TGATTGAGTCCATTACTATG+CGG + chr1.3:69110477-69110496 None:intergenic 35.0%
TGGACTCAATCAGTATAGAA+CGG - chr1.3:69110485-69110504 MS.gene49108:intron 35.0%
TGTAATGTTGAGCATGATCT+CGG + chr1.3:69110644-69110663 None:intergenic 35.0%
TTATTCCCTAAGGTAGACAT+CGG + chr1.3:69112085-69112104 None:intergenic 35.0%
TTTAGAAACATCATGGCCTT+TGG - chr1.3:69109394-69109413 MS.gene49108:CDS 35.0%
TTTATTAATCTGCTGCTAGC+TGG - chr1.3:69112262-69112281 MS.gene49108:CDS 35.0%
! ACATGGACGATGATAATGAA+TGG - chr1.3:69113549-69113568 MS.gene49108:intron 35.0%
! ATGAACGGATCTTTTATGGT+TGG + chr1.3:69113059-69113078 None:intergenic 35.0%
! ATGAGAGCATAATGAACCAA+AGG + chr1.3:69111677-69111696 None:intergenic 35.0%
! ATGTACATGTTTTCTGTGGA+TGG - chr1.3:69110516-69110535 MS.gene49108:intron 35.0%
! ATTCCTCAATGATCTGCTTT+TGG - chr1.3:69110942-69110961 MS.gene49108:CDS 35.0%
! CATGGACGATGATAATGAAT+GGG - chr1.3:69113550-69113569 MS.gene49108:intron 35.0%
! CCATCCAAATTTTCTATTGG+TGG + chr1.3:69110306-69110325 None:intergenic 35.0%
! CTACAATGAAGTGCATCTTT+TGG - chr1.3:69112342-69112361 MS.gene49108:CDS 35.0%
! GCAATCCATCCTAAGTTTTA+TGG - chr1.3:69110818-69110837 MS.gene49108:CDS 35.0%
! GGAGAGTTTAAAGCATTAGT+CGG + chr1.3:69113140-69113159 None:intergenic 35.0%
! TGAGAGCATAATGAACCAAA+GGG + chr1.3:69111676-69111695 None:intergenic 35.0%
! TGGAATGAACGGATCTTTTA+TGG + chr1.3:69113063-69113082 None:intergenic 35.0%
!! AATGATGTTTTTGTCTTGGG+AGG + chr1.3:69109338-69109357 None:intergenic 35.0%
!! AGTTTTGATGGTAGTTGCAT+GGG - chr1.3:69111470-69111489 MS.gene49108:CDS 35.0%
!! GCGTTTGATTTGAATTCTCT+TGG - chr1.3:69112690-69112709 MS.gene49108:CDS 35.0%
!! GTTCTACAACGTTATTTTGC+TGG - chr1.3:69112166-69112185 MS.gene49108:intron 35.0%
!! TTTTCTATTGGTGGCAAAAG+GGG + chr1.3:69110297-69110316 None:intergenic 35.0%
!!! TTGCAGATTTTTTCAACCTC+AGG + chr1.3:69110768-69110787 None:intergenic 35.0%
AAAAATCTGCAAAGCCCTAG+AGG - chr1.3:69110776-69110795 MS.gene49108:intron 40.0%
AAAACACTCCTATGCCTACA+GGG + chr1.3:69111416-69111435 None:intergenic 40.0%
AAACATACATGCACTCCTGA+AGG + chr1.3:69113598-69113617 None:intergenic 40.0%
AAAGTCCATAGAGGAGAAGA+AGG + chr1.3:69109485-69109504 None:intergenic 40.0%
AAGTTGTTACCACAAGCTTC+TGG + chr1.3:69113305-69113324 None:intergenic 40.0%
ACATAAAGAAACCCTCAGAG+AGG - chr1.3:69112107-69112126 MS.gene49108:intron 40.0%
ACTGGATTCTCATTGGATGT+TGG - chr1.3:69111157-69111176 MS.gene49108:CDS 40.0%
AGAAAGGACATGTGATCCAA+AGG + chr1.3:69109413-69109432 None:intergenic 40.0%
AGTTATATCTGTGGGAATCC+AGG + chr1.3:69111274-69111293 None:intergenic 40.0%
AGTTCTGCTATCACATTGTC+GGG + chr1.3:69113179-69113198 None:intergenic 40.0%
ATCAACCTTCTTCTCCTCTA+TGG - chr1.3:69109477-69109496 MS.gene49108:CDS 40.0%
ATTTACCTCTAGCCCAAACA+TGG - chr1.3:69111387-69111406 MS.gene49108:CDS 40.0%
CAAGTGTGAATCATTGTCAC+TGG + chr1.3:69111091-69111110 None:intergenic 40.0%
CAGATACGCTTCATTGTAGT+AGG + chr1.3:69112564-69112583 None:intergenic 40.0%
CATCACTTACAACATGGTCA+AGG - chr1.3:69111575-69111594 MS.gene49108:CDS 40.0%
CCACAGAAAACATGTACATC+AGG + chr1.3:69110515-69110534 None:intergenic 40.0%
CCATCAGTAAAAGTCCATAG+AGG + chr1.3:69109494-69109513 None:intergenic 40.0%
CGGTATGTACTTACAACTTC+AGG - chr1.3:69110432-69110451 MS.gene49108:CDS 40.0%
GAACAACATGTTGTGTTGAG+GGG - chr1.3:69113092-69113111 MS.gene49108:intron 40.0%
GAGGTTCATGGTGAAAATGT+AGG - chr1.3:69112046-69112065 MS.gene49108:intron 40.0%
GATGCACTTCATTGTAGTAG+AGG + chr1.3:69112339-69112358 None:intergenic 40.0%
GCATTGCCAAGTTATATCTG+TGG + chr1.3:69111283-69111302 None:intergenic 40.0%
GCCATCTCGAAAGATTAACA+AGG - chr1.3:69112608-69112627 MS.gene49108:CDS 40.0%
GGATTCCCACAGATATAACT+TGG - chr1.3:69111274-69111293 MS.gene49108:CDS 40.0%
GTAATCTGTCTTGCAGAACT+TGG + chr1.3:69111654-69111673 None:intergenic 40.0%
GTCGAACATCACTTACAACA+TGG - chr1.3:69111569-69111588 MS.gene49108:CDS 40.0%
GTTATATCTGTGGGAATCCA+GGG + chr1.3:69111273-69111292 None:intergenic 40.0%
GTTTGAGCTTAGATAGGGAA+CGG + chr1.3:69112638-69112657 None:intergenic 40.0%
GTTTGGAGGATTGCTAATAG+AGG - chr1.3:69113208-69113227 MS.gene49108:intron 40.0%
TAATCCAGTCCAATGTCATG+TGG - chr1.3:69110140-69110159 MS.gene49108:CDS 40.0%
TATGTTTCAAGATCATCCGG+AGG - chr1.3:69113611-69113630 MS.gene49108:intron 40.0%
TGAAATTCAGTAATCCCAGG+AGG + chr1.3:69111782-69111801 None:intergenic 40.0%
TGCAACGAAGGTTCAAATAC+AGG + chr1.3:69110690-69110709 None:intergenic 40.0%
TGCCTGGTAATTGCTTTCTT+GGG - chr1.3:69109988-69110007 MS.gene49108:CDS 40.0%
TGTTTAGCACCACATGACAT+TGG + chr1.3:69110152-69110171 None:intergenic 40.0%
TTATATCTGTGGGAATCCAG+GGG + chr1.3:69111272-69111291 None:intergenic 40.0%
TTATGTCATGCACCAAAACC+CGG + chr1.3:69113649-69113668 None:intergenic 40.0%
TTCAAATACAGGCAAAGCCA+AGG + chr1.3:69110679-69110698 None:intergenic 40.0%
TTCAGCAGAAACTACCAGAA+TGG - chr1.3:69110577-69110596 MS.gene49108:intron 40.0%
TTGATCCGATGTCTACCTTA+GGG - chr1.3:69112077-69112096 MS.gene49108:intron 40.0%
TTGCCTGGTAATTGCTTTCT+TGG - chr1.3:69109987-69110006 MS.gene49108:CDS 40.0%
TTTACCTCTAGCCCAAACAT+GGG - chr1.3:69111388-69111407 MS.gene49108:CDS 40.0%
! AAGCAACATAATCCGGGTTT+TGG - chr1.3:69113634-69113653 MS.gene49108:intron 40.0%
! AGGGCGTCAAAATGCATTAT+CGG - chr1.3:69111325-69111344 MS.gene49108:CDS 40.0%
! CCTCTATGGACTTTTACTGA+TGG - chr1.3:69109491-69109510 MS.gene49108:CDS 40.0%
! CCTGATGTACATGTTTTCTG+TGG - chr1.3:69110512-69110531 MS.gene49108:intron 40.0%
! CGTGTTATTGAATCTGTCCA+AGG - chr1.3:69112657-69112676 MS.gene49108:CDS 40.0%
! GTGGACTGAACTGAATGTAT+TGG - chr1.3:69110377-69110396 MS.gene49108:CDS 40.0%
! TGTTTGCGGAGTTTTCATAC+AGG - chr1.3:69111725-69111744 MS.gene49108:intron 40.0%
! TTTAGGGTCTCTTTGAACTG+TGG - chr1.3:69113458-69113477 MS.gene49108:intron 40.0%
! TTTGAGGAGCTCAGAGTTTT+TGG - chr1.3:69110984-69111003 MS.gene49108:CDS 40.0%
! TTTTCACCATGAACCTCTGA+TGG + chr1.3:69112043-69112062 None:intergenic 40.0%
!! GAATGTATTGGCTCAGGTTT+GGG - chr1.3:69110389-69110408 MS.gene49108:CDS 40.0%
!! GAGTTTTGATGGTAGTTGCA+TGG - chr1.3:69111469-69111488 MS.gene49108:CDS 40.0%
!! GCTGTTTTGCAATCTGTTTG+CGG - chr1.3:69111711-69111730 MS.gene49108:intron 40.0%
!! GTTTTGATGGTAGTTGCATG+GGG - chr1.3:69111471-69111490 MS.gene49108:CDS 40.0%
!! TGAACTGAATGTATTGGCTC+AGG - chr1.3:69110383-69110402 MS.gene49108:CDS 40.0%
!! TGAATGTATTGGCTCAGGTT+TGG - chr1.3:69110388-69110407 MS.gene49108:CDS 40.0%
!!! TAGAGTTTTTTCTGCCTCCT+GGG - chr1.3:69111765-69111784 MS.gene49108:intron 40.0%
!!! TTAGAGTTTTTTCTGCCTCC+TGG - chr1.3:69111764-69111783 MS.gene49108:intron 40.0%
AAAATGGCCTCAGCTACTGA+AGG + chr1.3:69113269-69113288 None:intergenic 45.0%
AAAGATGCTGCAAAGAGCCT+TGG - chr1.3:69112196-69112215 MS.gene49108:intron 45.0%
AAATGGCCTCAGCTACTGAA+GGG + chr1.3:69113268-69113287 None:intergenic 45.0%
AATGTTGAGCATGATCTCGG+CGG + chr1.3:69110641-69110660 None:intergenic 45.0%
ACTATGCGGATCAAGGACAA+AGG + chr1.3:69110463-69110482 None:intergenic 45.0%
ACTTCTCATGGTTCATGCCA+CGG - chr1.3:69113014-69113033 MS.gene49108:intron 45.0%
AGAACATTGGGAGACCATTC+TGG + chr1.3:69110594-69110613 None:intergenic 45.0%
AGCAAGGCTCGTTAAGCAAT+AGG - chr1.3:69112775-69112794 MS.gene49108:intron 45.0%
AGCACAAACCCTACTTCTCA+TGG - chr1.3:69113002-69113021 MS.gene49108:intron 45.0%
AGCCCAAGAAAGCAATTACC+AGG + chr1.3:69109993-69110012 None:intergenic 45.0%
AGTGTGCATGTCTACAACTG+AGG - chr1.3:69111496-69111515 MS.gene49108:CDS 45.0%
ATTGTTCTATCGCTTACCCC+TGG - chr1.3:69111253-69111272 MS.gene49108:CDS 45.0%
CAAAACACTCCTATGCCTAC+AGG + chr1.3:69111417-69111436 None:intergenic 45.0%
CACCTGTGAGGAATGGTAAT+CGG - chr1.3:69110412-69110431 MS.gene49108:CDS 45.0%
CAGAGTCTTAACATTGCTGC+TGG - chr1.3:69111854-69111873 MS.gene49108:intron 45.0%
CATGAACAGAAGACGCTGTT+GGG - chr1.3:69111800-69111819 MS.gene49108:intron 45.0%
CCAATACATGACTGCAACGA+AGG + chr1.3:69110702-69110721 None:intergenic 45.0%
CCTCAAATTTACTGCCTGCA+AGG + chr1.3:69110971-69110990 None:intergenic 45.0%
CCTTCGTTGCAGTCATGTAT+TGG - chr1.3:69110699-69110718 MS.gene49108:intron 45.0%
CCTTGCAGGCAGTAAATTTG+AGG - chr1.3:69110968-69110987 MS.gene49108:CDS 45.0%
CGCTTCGTTACTTCAAAGAG+TGG - chr1.3:69110358-69110377 MS.gene49108:CDS 45.0%
CTACAATGAAGCGTATCTGC+AGG - chr1.3:69112565-69112584 MS.gene49108:CDS 45.0%
CTATCACATTGTCGGGCATA+CGG + chr1.3:69113172-69113191 None:intergenic 45.0%
CTATGCGGATCAAGGACAAA+GGG + chr1.3:69110462-69110481 None:intergenic 45.0%
CTCTTTGAACTGTGGCATTG+TGG - chr1.3:69113466-69113485 MS.gene49108:intron 45.0%
CTGCAAGACAGATTACCCTT+TGG - chr1.3:69111658-69111677 MS.gene49108:CDS 45.0%
CTGGACTTATTCGGAGTAGA+AGG + chr1.3:69112753-69112772 None:intergenic 45.0%
CTTTCCAGGTTCATCACATC+TGG - chr1.3:69113322-69113341 MS.gene49108:intron 45.0%
GAAAGCTGAAGCTGCAAGTT+TGG + chr1.3:69109525-69109544 None:intergenic 45.0%
GCTCAACATTACAACGTTCG+TGG - chr1.3:69110651-69110670 MS.gene49108:intron 45.0%
GCTTGTGGTAACAACTTTCC+AGG - chr1.3:69113308-69113327 MS.gene49108:intron 45.0%
GGCATGAACCATGAGAAGTA+GGG + chr1.3:69113013-69113032 None:intergenic 45.0%
GGCGTGACTATTCAGGAAAT+TGG - chr1.3:69112933-69112952 MS.gene49108:intron 45.0%
GTCCATTACTATGCGGATCA+AGG + chr1.3:69110470-69110489 None:intergenic 45.0%
GTCCTTGATCCGCATAGTAA+TGG - chr1.3:69110465-69110484 MS.gene49108:intron 45.0%
GTTGATCCGATGTCTACCTT+AGG - chr1.3:69112076-69112095 MS.gene49108:intron 45.0%
TATTGCTTAACGAGCCTTGC+TGG + chr1.3:69112776-69112795 None:intergenic 45.0%
TCATGAACAGAAGACGCTGT+TGG - chr1.3:69111799-69111818 MS.gene49108:intron 45.0%
TGGCATGAACCATGAGAAGT+AGG + chr1.3:69113014-69113033 None:intergenic 45.0%
TTACAACGTTCGTGGAACCT+TGG - chr1.3:69110659-69110678 MS.gene49108:intron 45.0%
TTATTCGGAGTAGAAGGCTC+AGG + chr1.3:69112747-69112766 None:intergenic 45.0%
TTCAATAACTGAGAAGCCGG+TGG - chr1.3:69110242-69110261 MS.gene49108:CDS 45.0%
TTCTGCTGAAAAACTCGACC+AGG + chr1.3:69110567-69110586 None:intergenic 45.0%
TTGTTGTCGTCTTTCTCCAC+CGG + chr1.3:69110261-69110280 None:intergenic 45.0%
TTTCCACGTTTCCTCTCTGA+GGG + chr1.3:69112121-69112140 None:intergenic 45.0%
TTTGGACCATCCATTCACTC+AGG - chr1.3:69111002-69111021 MS.gene49108:CDS 45.0%
! CTCCATATTTGGTGAGGCAT+CGG + chr1.3:69111993-69112012 None:intergenic 45.0%
! GGTGTTGAACTCGAGGAAAA+TGG - chr1.3:69111875-69111894 MS.gene49108:intron 45.0%
! TACCGATTACCATTCCTCAC+AGG + chr1.3:69110417-69110436 None:intergenic 45.0%
! TCCATATTTGGTGAGGCATC+GGG + chr1.3:69111992-69112011 None:intergenic 45.0%
! TCTTTCATCTGAGGCTCTGA+CGG + chr1.3:69112801-69112820 None:intergenic 45.0%
! TGGTAAAGGCGTGACTATTC+AGG - chr1.3:69112926-69112945 MS.gene49108:intron 45.0%
! TTCAGTAGCTGAGGCCATTT+TGG - chr1.3:69113268-69113287 MS.gene49108:intron 45.0%
! TTTTCCACGTTTCCTCTCTG+AGG + chr1.3:69112122-69112141 None:intergenic 45.0%
!! ACAACATGGTCAAGGTGTTG+CGG - chr1.3:69111583-69111602 MS.gene49108:CDS 45.0%
!!! CATAGGAGTGTTTTGGCTCA+TGG - chr1.3:69111422-69111441 MS.gene49108:CDS 45.0%
!!! CTGTAGGCATAGGAGTGTTT+TGG - chr1.3:69111415-69111434 MS.gene49108:CDS 45.0%
!!! TCTGCTTTTGGTTTCCTTGC+AGG - chr1.3:69110954-69110973 MS.gene49108:CDS 45.0%
AAACCCTCAGAGAGGAAACG+TGG - chr1.3:69112115-69112134 MS.gene49108:intron 50.0%
AAATATGGAGGAGGAGGAGG+AGG - chr1.3:69112003-69112022 MS.gene49108:CDS 50.0%
AAGCTCCTGTGAGAGTTCAG+GGG - chr1.3:69113682-69113701 MS.gene49108:CDS 50.0%
AATATGGAGGAGGAGGAGGA+GGG - chr1.3:69112004-69112023 MS.gene49108:CDS 50.0%
ACCAAATATGGAGGAGGAGG+AGG - chr1.3:69112000-69112019 MS.gene49108:CDS 50.0%
ACCCGATGCCTCACCAAATA+TGG - chr1.3:69111988-69112007 MS.gene49108:CDS 50.0%
AGAGTATGAACGTACCGCCA+AGG + chr1.3:69112216-69112235 None:intergenic 50.0%
AGCACCACATGACATTGGAC+TGG + chr1.3:69110147-69110166 None:intergenic 50.0%
AGCATGTGATGCAGACCTTC+AGG - chr1.3:69113580-69113599 MS.gene49108:intron 50.0%
AGTACCACAGGATCCATCAG+AGG - chr1.3:69112027-69112046 MS.gene49108:intron 50.0%
ATGTTGAGCATGATCTCGGC+GGG + chr1.3:69110640-69110659 None:intergenic 50.0%
CAGGATCCATCAGAGGTTCA+TGG - chr1.3:69112034-69112053 MS.gene49108:intron 50.0%
CCGGAGGAAGCAACATAATC+CGG - chr1.3:69113627-69113646 MS.gene49108:intron 50.0%
CCTACAGGGAACCCATGTTT+GGG + chr1.3:69111402-69111421 None:intergenic 50.0%
CGATGCCTCACCAAATATGG+AGG - chr1.3:69111991-69112010 MS.gene49108:CDS 50.0%
CGGAGGAAGCAACATAATCC+GGG - chr1.3:69113628-69113647 MS.gene49108:intron 50.0%
CTCACCAAATATGGAGGAGG+AGG - chr1.3:69111997-69112016 MS.gene49108:CDS 50.0%
GAACTTCAAGAGCCGTTTGG+AGG - chr1.3:69113194-69113213 MS.gene49108:intron 50.0%
GAAGCTCCTGTGAGAGTTCA+GGG - chr1.3:69113681-69113700 MS.gene49108:CDS 50.0%
GCAGAACTTCAAGAGCCGTT+TGG - chr1.3:69113191-69113210 MS.gene49108:intron 50.0%
GCTGAAGTTTCACGGCTTCA+TGG - chr1.3:69109958-69109977 MS.gene49108:CDS 50.0%
GGAGAGAACGATGGAACTCT+AGG - chr1.3:69110537-69110556 MS.gene49108:intron 50.0%
GGATTGCTAATAGAGGACGC+TGG - chr1.3:69113215-69113234 MS.gene49108:intron 50.0%
GTGCATGTCTACAACTGAGG+CGG - chr1.3:69111499-69111518 MS.gene49108:CDS 50.0%
TCCTCCTCCTCCTCCATATT+TGG + chr1.3:69112004-69112023 None:intergenic 50.0%
TCTGTGGATGGAGAGAACGA+TGG - chr1.3:69110528-69110547 MS.gene49108:intron 50.0%
TGCCTCACCAAATATGGAGG+AGG - chr1.3:69111994-69112013 MS.gene49108:CDS 50.0%
TTTCAATTGGGGGACTACCG+TGG + chr1.3:69113034-69113053 None:intergenic 50.0%
TTTGTGCCCTTCAGTAGCTG+AGG - chr1.3:69113259-69113278 MS.gene49108:intron 50.0%
! CCGGATTATGTTGCTTCCTC+CGG + chr1.3:69113630-69113649 None:intergenic 50.0%
! CCTTGCTGGCTGGACTTATT+CGG + chr1.3:69112762-69112781 None:intergenic 50.0%
! CTCCTCCTCCATATTTGGTG+AGG + chr1.3:69111999-69112018 None:intergenic 50.0%
! TCTATTGGTGGCAAAAGGGG+TGG + chr1.3:69110294-69110313 None:intergenic 50.0%
! TGAACCTCTGATGGATCCTG+TGG + chr1.3:69112034-69112053 None:intergenic 50.0%
!! AACATGGTCAAGGTGTTGCG+GGG - chr1.3:69111585-69111604 MS.gene49108:CDS 50.0%
!! AGTAGCTGAGGCCATTTTGG+AGG - chr1.3:69113271-69113290 MS.gene49108:intron 50.0%
!! CAACATGGTCAAGGTGTTGC+GGG - chr1.3:69111584-69111603 MS.gene49108:CDS 50.0%
!! GATGGAACTCTAGGACTTCC+TGG - chr1.3:69110546-69110565 MS.gene49108:intron 50.0%
!! TGAGGCCATTTTGGAGGATC+TGG - chr1.3:69113277-69113296 MS.gene49108:intron 50.0%
!!! AGGAGTGTTTTGGCTCATGG+TGG - chr1.3:69111425-69111444 MS.gene49108:CDS 50.0%
!!! AGTGTTTTGGCTCATGGTGG+CGG - chr1.3:69111428-69111447 MS.gene49108:CDS 50.0%
AAGCGTATCTGCAGGCAGCA+TGG - chr1.3:69112573-69112592 MS.gene49108:CDS 55.0%
AGCGTATCTGCAGGCAGCAT+GGG - chr1.3:69112574-69112593 MS.gene49108:CDS 55.0%
CATGGGTTCCCTGTAGGCAT+AGG - chr1.3:69111405-69111424 MS.gene49108:CDS 55.0%
CCCAAACATGGGTTCCCTGT+AGG - chr1.3:69111399-69111418 MS.gene49108:CDS 55.0%
CCGAATAAGTCCAGCCAGCA+AGG - chr1.3:69112759-69112778 MS.gene49108:CDS 55.0%
GATGCTGCAAAGAGCCTTGG+CGG - chr1.3:69112199-69112218 MS.gene49108:intron 55.0%
GCCTACAGGGAACCCATGTT+TGG + chr1.3:69111403-69111422 None:intergenic 55.0%
GCTTCATGGCTAGAGTTGCC+TGG - chr1.3:69109972-69109991 MS.gene49108:CDS 55.0%
GGAAGCTCCTGTGAGAGTTC+AGG - chr1.3:69113680-69113699 MS.gene49108:CDS 55.0%
GGAGCCAGATGTGATGAACC+TGG + chr1.3:69113329-69113348 None:intergenic 55.0%
GGCAGCATGGGATATCTCGT+TGG - chr1.3:69112586-69112605 MS.gene49108:CDS 55.0%
GTTTGGGCACCTGTGAGGAA+TGG - chr1.3:69110405-69110424 MS.gene49108:CDS 55.0%
TCACTCCCCTGAACTCTCAC+AGG + chr1.3:69113690-69113709 None:intergenic 55.0%
TCGGGCATACGGTGAGAAGT+TGG + chr1.3:69113161-69113180 None:intergenic 55.0%
TGTTGAGCATGATCTCGGCG+GGG + chr1.3:69110639-69110658 None:intergenic 55.0%
! GGAACCCATGTTTGGGCTAG+AGG + chr1.3:69111395-69111414 None:intergenic 55.0%
! TGCTGCTGGTGTTGAACTCG+AGG - chr1.3:69111868-69111887 MS.gene49108:intron 55.0%
!! GAATCTGTCCAAGGCGCTGA+AGG - chr1.3:69112666-69112685 MS.gene49108:CDS 55.0%
!! TTTGGTGAGGCATCGGGTCT+AGG + chr1.3:69111986-69112005 None:intergenic 55.0%
CAAACGCTCCTTCAGCGCCT+TGG + chr1.3:69112677-69112696 None:intergenic 60.0%
CTCAGGTTTGGGCACCTGTG+AGG - chr1.3:69110400-69110419 MS.gene49108:CDS 60.0%
GCTTAACGAGCCTTGCTGGC+TGG + chr1.3:69112772-69112791 None:intergenic 60.0%
GTTGAGGGGATCGCCAGAGT+CGG - chr1.3:69113106-69113125 MS.gene49108:intron 60.0%
TTGAGGGGATCGCCAGAGTC+GGG - chr1.3:69113107-69113126 MS.gene49108:intron 60.0%
!! ATGGTCAAGGTGTTGCGGGG+AGG - chr1.3:69111588-69111607 MS.gene49108:CDS 60.0%
!! TGGTCAAGGTGTTGCGGGGA+GGG - chr1.3:69111589-69111608 MS.gene49108:CDS 60.0%
GTCGGCTGCATTCCCGACTC+TGG + chr1.3:69113122-69113141 None:intergenic 65.0%
!! GGAGGAGGAGGGAGTACCAC+AGG - chr1.3:69112015-69112034 MS.gene49108:CDS 65.0%
!! GGTGAGGCATCGGGTCTAGG+TGG + chr1.3:69111983-69112002 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 69109302 69113709 69109302 ID=MS.gene49108
chr1.3 mRNA 69109302 69113709 69109302 ID=MS.gene49108.t1;Parent=MS.gene49108
chr1.3 exon 69113643 69113709 69113643 ID=MS.gene49108.t1.exon1;Parent=MS.gene49108.t1
chr1.3 CDS 69113643 69113709 69113643 ID=cds.MS.gene49108.t1;Parent=MS.gene49108.t1
chr1.3 exon 69112214 69112779 69112214 ID=MS.gene49108.t1.exon2;Parent=MS.gene49108.t1
chr1.3 CDS 69112214 69112779 69112214 ID=cds.MS.gene49108.t1;Parent=MS.gene49108.t1
chr1.3 exon 69111988 69112035 69111988 ID=MS.gene49108.t1.exon3;Parent=MS.gene49108.t1
chr1.3 CDS 69111988 69112035 69111988 ID=cds.MS.gene49108.t1;Parent=MS.gene49108.t1
chr1.3 exon 69110791 69111697 69110791 ID=MS.gene49108.t1.exon4;Parent=MS.gene49108.t1
chr1.3 CDS 69110791 69111697 69110791 ID=cds.MS.gene49108.t1;Parent=MS.gene49108.t1
chr1.3 exon 69109302 69110455 69109302 ID=MS.gene49108.t1.exon5;Parent=MS.gene49108.t1
chr1.3 CDS 69109302 69110455 69109302 ID=cds.MS.gene49108.t1;Parent=MS.gene49108.t1
Gene Sequence

>MS.gene49108

ATGTCAGAACCTGAAGAAGAAAATCAAGACTTTCCTCCCAAGACAAAAACATCATTAGAAGAACATGGTTGTTCTATGGATTTTGATCTAGATTTAGAAACATCATGGCCTTTGGATCACATGTCCTTTCTCTCTAATAATCCCATGTCACCTTTTTTGTTTTCAAACATCTCTGATCAACCTTCTTCTCCTCTATGGACTTTTACTGATGGAGAAGATGCCAAACTTGCAGCTTCAGCTTTCTCTGATTGCCACAAGATCTTCTCTTGTATGTTTTGTTTTGTTTAGATTCTTTTTCTGTTGACTTCAGTTTTGAAAGTTTTTTGAATCTTTTGAACTTGCTTAATTAATTCATAGTTGACTGTAACTTGATTTTGATGCAACAAATTTTGCTTTGTTTGATTTTATAATGGAATATGTGAATTTTAGAGTTTATAATTATTTTCCCTTAATGTATAATGAGTTTATGTGTGCCTAATTTTACTTGTGAATGTTGGTGTAGTGAAGAAACATTTTTTAATTAAAAAGAAAAATTATATTAATAACCTACTACAGTATTTGAAGATTAAGTTGATTATATGCGTTGTTAATTATGTAGAAGGACTTTATGTGATTGAAATTGAATTTGTTTTTGTCTCCCTCTTCTAAATTGAACAGCTGAAGTTTCACGGCTTCATGGCTAGAGTTGCCTGGTAATTGCTTTCTTGGGCTTTTACCTTATACAAGTACATGCTACATTTGTTATTATGATTCTTTGAGTATTTATAAGGTTTGAAATTGAAAGTTCTAGATATACTTGTATTTTTGAGCTATTAATATAATAACCGTGAAGTTTTCATAATCCAGTCCAATGTCATGTGGTGCTAAACATGTATTTTGCAGTTTATGTGGAGAGCTGCATTTCTTCTAACTAAAGCTACTGTTTTTCAGGTGATTCAAATTCAATAACTGAGAAGCCGGTGGAGAAAGACGACAACAAAACACTTTTGCCACCCCTTTTGCCACCAATAGAAAATTTGGATGGATATTGTGTAATCAAGGAAAAGATGACACAAGCGCTTCGTTACTTCAAAGAGTGGACTGAACTGAATGTATTGGCTCAGGTTTGGGCACCTGTGAGGAATGGTAATCGGTATGTACTTACAACTTCAGGTCAACCCTTTGTCCTTGATCCGCATAGTAATGGACTCAATCAGTATAGAACGGTTTCCCTGATGTACATGTTTTCTGTGGATGGAGAGAACGATGGAACTCTAGGACTTCCTGGTCGAGTTTTTCAGCAGAAACTACCAGAATGGTCTCCCAATGTTCTGTACTATTCTAATAAAGAGTATCCCCGCCGAGATCATGCTCAACATTACAACGTTCGTGGAACCTTGGCTTTGCCTGTATTTGAACCTTCGTTGCAGTCATGTATTGGTGTGATAGAGTTGATAATGACTTCACTAAAGATTAACTATGCTCCTGAGGTTGAAAAAATCTGCAAAGCCCTAGAGGTTGAGTTTCTTTTAACTTTGCAATCCATCCTAAGTTTTATGGTTTTCTTATGTTTGGTGATTACAATGTGACGAACTGATATTTATACATTTTATACCAAGTTTTCAATGGCAGAGATTTTGAATAACTATAAACATATTTAGATTCCTCAATGATCTGCTTTTGGTTTCCTTGCAGGCAGTAAATTTGAGGAGCTCAGAGTTTTTGGACCATCCATTCACTCAGGTATTTTTATTTTTAGAGTTTAATGGAGGTACGCAGTCAGTATAAATTTGTTTTGCACTGACAGCCAGTGACAATGATTCACACTTGCAACATAAGCCTATTTGTAACTGCATTTTAAAAATAATTGGAAAATACTGGATTCTCATTGGATGTTGGTGTAAATGCATATCCTGATTTGTTTTTATCATGTATGATGCATCCCAGTCTGTTATATCTAGATAATGTTGTTATTGTTCTATCGCTTACCCCTGGATTCCCACAGATATAACTTGGCAATGCTTTTAAATCAGATTTGCAATGAAGGGCGTCAAAATGCATTATCGGAGATCTTAGAGATATTGACAGTGGTGTGTGAAACTCATAATTTACCTCTAGCCCAAACATGGGTTCCCTGTAGGCATAGGAGTGTTTTGGCTCATGGTGGCGGTTTCAAGAAAAGTTGTTCGAGTTTTGATGGTAGTTGCATGGGGCAAGTGTGCATGTCTACAACTGAGGCGGCAGCCTATATCGTAGATGCTCATTTATGGGGTTTCAGAGAAGCATGTGTCGAACATCACTTACAACATGGTCAAGGTGTTGCGGGGAGGGCGTTTTTGTCTCAAAACATGTGCTTCTGCACAAACATTACCAAGTTCTGCAAGACAGATTACCCTTTGGTTCATTATGCTCTCATGTTTGGGTTAACAAGCTGTTTTGCAATCTGTTTGCGGAGTTTTCATACAGGAAATGATGATTATGTATTAGAGTTTTTTCTGCCTCCTGGGATTACTGAATTTCATGAACAGAAGACGCTGTTGGGATCCATATTGTCAACAATGAAACAGCATTTTCAGAGTCTTAACATTGCTGCTGGTGTTGAACTCGAGGAAAATGGTTCAATTGAAATTATTGAAGCAACTGATGAAGGCATTCGTCTTAGAACCGAATCTATTCCTATTGCTCAATCTATTAAATCACCACCTAGACCCGATGCCTCACCAAATATGGAGGAGGAGGAGGAGGGAGTACCACAGGATCCATCAGAGGTTCATGGTGAAAATGTAGGCAGAAGTGTTGATCCGATGTCTACCTTAGGGAATAAAAACATAAAGAAACCCTCAGAGAGGAAACGTGGAAAAACTGAGAAATCAATTAGTCTTGAAGTTCTACAACGTTATTTTGCTGGGAGTCTTAAAGATGCTGCAAAGAGCCTTGGCGGTACGTTCATACTCTGACATATAGTGTGATGCGATTTTATCTTTATTAATCTGCTGCTAGCTGGAAACATATTCATCCAATATTAACATTTTATAATTCTCTAAGAATACACATGCCTCTACTACAATGAAGTGCATCTTTTGGTTATTTTATCTTTACAAATTTGCTGCTATCTGGAAATATACAATTACCAAAGAATGTATTACGTAATCGAAACATACAAACTGTATTTTTGTAAAAAAAAAAAAAAAAACAGTAGTAGTTTGTTATCTAAGAAACATGAAAGAAAGTAGTAGCTTTAACACAAACTTCTTGGATATATTCTTGTTGTACAGTTTGCCCTACTACAATGAAGCGTATCTGCAGGCAGCATGGGATATCTCGTTGGCCATCTCGAAAGATTAACAAGGTTAACCGTTCCCTATCTAAGCTCAAACGTGTTATTGAATCTGTCCAAGGCGCTGAAGGAGCGTTTGATTTGAATTCTCTTGGTAATAATCAACTTCCAATTGTTAGTTCATTTCCTGAGCCTTCTACTCCGAATAAGTCCAGCCAGCAAGGCTCGTTAAGCAATAGGCCGTCAGAGCCTCAGATGAAAGAGAATGAATTTGATGCCTCTAAAGTATCAGAAACAAACATACAGATTGTAATGGAAAATCAATTGCTAGGAGGAAGGAAACATAGTCTTGAGAAAGAAGTGATTAATGGTAAAGGCGTGACTATTCAGGAAATTGGAAAGGACCGAAAAAGGAATAGAACTAGGAGTGGCTCGAGCGAAGATAGCACAAACCCTACTTCTCATGGTTCATGCCACGGTAGTCCCCCAATTGAAATTCCAACCATAAAAGATCCGTTCATTCCATCCAACAATGAACAACATGTTGTGTTGAGGGGATCGCCAGAGTCGGGAATGCAGCCGACTAATGCTTTAAACTCTCCAACTTCTCACCGTATGCCCGACAATGTGATAGCAGAACTTCAAGAGCCGTTTGGAGGATTGCTAATAGAGGACGCTGGAAGTTCGAAAGACTTGAGAAATTTGTGCCCTTCAGTAGCTGAGGCCATTTTGGAGGATCTGGCTCCAGAAGCTTGTGGTAACAACTTTCCAGGTTCATCACATCTGGCTCCTCCTAAACAATGCATTGATATCATTAATAATTCAGTGACGCCTTTTGCAGCTAGAAAAGAAATGAAGACTGTAACTATTAAGGCAACATATAGAGAAGATATCATAAGGTTTAGGGTCTCTTTGAACTGTGGCATTGTGGAATTGAAAGAAGAAGTTTCCAAAAGATTGAAACTTGAGGTTGGCACATTTGATATCAAGTACATGGACGATGATAATGAATGGGTTTTGATAGCATGTGATGCAGACCTTCAGGAGTGCATGTATGTTTCAAGATCATCCGGAGGAAGCAACATAATCCGGGTTTTGGTGCATGACATAACATCAAATCTTGGAAGCTCCTGTGAGAGTTCAGGGGAGTGA
Protein sequence

>MS.gene49108.t1

MSEPEEENQDFPPKTKTSLEEHGDSNSITEKPVEKDDNKTLLPPLLPPIENLDGYCVIKEKMTQALRYFKEWTELNVLAQVWAPVRNGNRYVLTTSGQPFVLDPHSNGLNQYRTVSLMYMFSVDGENDGTLGLPGRVFQQKLPEWSPNVLYYSNKEYPRRDHAQHYNVRGTLALPVFEPSLQSCIGVIELIMTSLKINYAPEVEKICKALEAVNLRSSEFLDHPFTQICNEGRQNALSEILEILTVVCETHNLPLAQTWVPCRHRSVLAHGGGFKKSCSSFDGSCMGQVCMSTTEAAAYIVDAHLWGFREACVEHHLQHGQGVAGRAFLSQNMCFCTNITKFCKTDYPLVHYALMFGLTSCFAICLRSFHTGNDDYVLEFFLPPGITEFHEQKTLLGSILSTMKQHFQSLNIAAGVELEENGSIEIIEATDEGIRLRTESIPIAQSIKSPPRPDASPNMEEEEEGVPQDPSEVHGENVGRSVDPMSTLGNKNIKKPSERKRGKTEKSISLEVLQRYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFDLNSLGNNQLPIVSSFPEPSTPNKSSQQGSLSNRPSEPQMKENEFDASKVSETNIQIVMENQLLGGRKHSLEKEVINGKGVTIQEIGKDRKRNRTRSGSSEDSTNPTSHGSCHGSPPIEIPTIKDPFIPSNNEQHVVLRGSPESGMQPTNALNSPTSHRMPDNVIAELQEPFGGLLIEDAGSSKDLRNLCPSVAEAILEDLAPEACGNNFPGSSHLAPPKQCIDIINNSVTPFAARKEMKTVTIKATYREDIIRFRVSLNCGIVELKEEVSKRLKLEVGTFDIKYMDDDNEWVLIACDADLQECMYVSRSSGGSNIIRVLVHDITSNLGSSCESSGE