Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49152.t1 | GAU32342.1 | 55.3 | 103 | 39 | 2 | 2 | 100 | 28 | 127 | 9.70E-18 | 100.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49152.t1 | A7PZL3 | 46.3 | 54 | 29 | 0 | 99 | 152 | 392 | 445 | 5.4e-09 | 62.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49152.t1 | A0A2Z6N6C3 | 55.3 | 103 | 39 | 2 | 2 | 100 | 28 | 127 | 7.0e-18 | 100.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene49152.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49152.t1 | MTR_7g083950 | 55.319 | 94 | 36 | 1 | 7 | 100 | 27 | 114 | 2.63e-24 | 97.8 |
| MS.gene49152.t1 | MTR_1g100040 | 75.000 | 56 | 14 | 0 | 98 | 153 | 384 | 439 | 5.41e-22 | 91.7 |
| MS.gene49152.t1 | MTR_1g100060 | 70.909 | 55 | 16 | 0 | 99 | 153 | 422 | 476 | 7.82e-22 | 91.3 |
| MS.gene49152.t1 | MTR_1g100050 | 71.429 | 56 | 16 | 0 | 98 | 153 | 378 | 433 | 1.16e-21 | 90.5 |
| MS.gene49152.t1 | MTR_1g099850 | 60.000 | 65 | 26 | 0 | 89 | 153 | 374 | 438 | 1.12e-19 | 85.1 |
| MS.gene49152.t1 | MTR_1g109340 | 56.322 | 87 | 20 | 3 | 14 | 100 | 30 | 98 | 7.38e-19 | 82.0 |
| MS.gene49152.t1 | MTR_3g006010 | 35.433 | 127 | 49 | 2 | 7 | 100 | 22 | 148 | 9.68e-16 | 73.6 |
| MS.gene49152.t1 | MTR_7g088550 | 66.667 | 57 | 17 | 1 | 99 | 153 | 380 | 436 | 1.33e-15 | 73.2 |
| MS.gene49152.t1 | MTR_6g091830 | 39.091 | 110 | 55 | 4 | 7 | 106 | 27 | 134 | 3.03e-14 | 69.3 |
| MS.gene49152.t1 | MTR_6g092140 | 39.091 | 110 | 55 | 4 | 7 | 106 | 27 | 134 | 3.09e-14 | 69.3 |
| MS.gene49152.t1 | MTR_8g028725 | 48.214 | 56 | 29 | 0 | 98 | 153 | 383 | 438 | 5.14e-13 | 65.9 |
| MS.gene49152.t1 | MTR_1g105960 | 53.571 | 56 | 26 | 0 | 6 | 61 | 13 | 68 | 1.15e-12 | 61.2 |
| MS.gene49152.t1 | MTR_1g109090 | 78.378 | 37 | 8 | 0 | 64 | 100 | 7 | 43 | 2.53e-12 | 61.2 |
| MS.gene49152.t1 | MTR_5g036670 | 47.222 | 72 | 35 | 1 | 6 | 74 | 55 | 126 | 6.63e-12 | 62.8 |
| MS.gene49152.t1 | MTR_6g008970 | 49.153 | 59 | 30 | 0 | 6 | 64 | 75 | 133 | 1.26e-11 | 62.0 |
| MS.gene49152.t1 | MTR_8g098840 | 46.429 | 56 | 30 | 0 | 98 | 153 | 372 | 427 | 2.13e-11 | 61.2 |
| MS.gene49152.t1 | MTR_8g062700 | 50.000 | 60 | 30 | 0 | 6 | 65 | 54 | 113 | 3.73e-11 | 60.8 |
| MS.gene49152.t1 | MTR_8g062700 | 50.000 | 60 | 30 | 0 | 6 | 65 | 54 | 113 | 3.77e-11 | 60.8 |
| MS.gene49152.t1 | MTR_1g105955 | 57.447 | 47 | 20 | 0 | 15 | 61 | 116 | 162 | 8.57e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49152.t1 | AT3G48950 | 52.727 | 55 | 26 | 0 | 98 | 152 | 374 | 428 | 2.34e-13 | 67.0 |
| MS.gene49152.t1 | AT3G01320 | 38.298 | 94 | 48 | 2 | 2 | 95 | 65 | 148 | 4.77e-12 | 63.5 |
| MS.gene49152.t1 | AT3G01320 | 38.298 | 94 | 48 | 2 | 2 | 95 | 65 | 148 | 5.00e-12 | 63.2 |
| MS.gene49152.t1 | AT4G23500 | 43.750 | 64 | 36 | 0 | 89 | 152 | 387 | 450 | 1.61e-11 | 61.6 |
| MS.gene49152.t1 | AT3G61490 | 51.852 | 54 | 26 | 0 | 99 | 152 | 389 | 442 | 1.81e-11 | 61.6 |
| MS.gene49152.t1 | AT3G61490 | 51.852 | 54 | 26 | 0 | 99 | 152 | 487 | 540 | 2.21e-11 | 61.2 |
| MS.gene49152.t1 | AT1G24190 | 46.032 | 63 | 34 | 0 | 2 | 64 | 22 | 84 | 2.34e-11 | 61.2 |
| MS.gene49152.t1 | AT1G24190 | 46.032 | 63 | 34 | 0 | 2 | 64 | 22 | 84 | 2.45e-11 | 61.2 |
| MS.gene49152.t1 | AT1G24190 | 46.032 | 63 | 34 | 0 | 2 | 64 | 22 | 84 | 2.46e-11 | 61.2 |
| MS.gene49152.t1 | AT3G61490 | 50.000 | 56 | 28 | 0 | 98 | 153 | 373 | 428 | 3.25e-11 | 60.8 |
| MS.gene49152.t1 | AT3G61490 | 50.000 | 56 | 28 | 0 | 98 | 153 | 373 | 428 | 3.25e-11 | 60.8 |
| MS.gene49152.t1 | AT3G61490 | 50.000 | 56 | 28 | 0 | 98 | 153 | 373 | 428 | 3.25e-11 | 60.8 |
| MS.gene49152.t1 | AT2G23900 | 49.091 | 55 | 28 | 0 | 98 | 152 | 385 | 439 | 3.90e-11 | 60.5 |
Find 29 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCCTCGTCATGGTAGTTC+TGG | 0.199501 | 1.3:+68741235 | None:intergenic |
| TGGAATTGCAGTGATGTTTA+TGG | 0.266128 | 1.3:-68737604 | MS.gene49152:CDS |
| TGAAGTGAGTGCACATAAAA+AGG | 0.288107 | 1.3:-68737635 | MS.gene49152:CDS |
| GGTCGACAAAATCTAGTGTT+TGG | 0.335860 | 1.3:+68739703 | None:intergenic |
| GCTAAGAATGTGACAATTGC+AGG | 0.380351 | 1.3:-68737718 | MS.gene49152:CDS |
| TGCCTCGTCATGGTAGTTCT+GGG | 0.393485 | 1.3:+68741236 | None:intergenic |
| AGAGAACCGTGAACTTCCTT+TGG | 0.394473 | 1.3:-68739745 | MS.gene49152:CDS |
| AGTTTGATTTGATGTTCCTT+TGG | 0.399942 | 1.3:+68741078 | None:intergenic |
| ACACACCGGCAAATTGAAAA+AGG | 0.404330 | 1.3:+68739682 | None:intergenic |
| GTTGTGATCTAAAGGGAAAA+AGG | 0.417556 | 1.3:-68739781 | MS.gene49152:intron |
| GTCGACAAAATCTAGTGTTT+GGG | 0.443544 | 1.3:+68739704 | None:intergenic |
| TGATTTGATGTTCCTTTGGC+AGG | 0.443659 | 1.3:+68741082 | None:intergenic |
| AGAGTCAAGGAGCTGCTTGA+AGG | 0.509677 | 1.3:-68741138 | MS.gene49152:CDS |
| AGGTGCTGCGGCAAGAGTCA+AGG | 0.534822 | 1.3:-68741151 | MS.gene49152:CDS |
| TTGATGTTCCTTTGGCAGGA+AGG | 0.538933 | 1.3:+68741086 | None:intergenic |
| GAGTCAAGGAGCTGCTTGAA+GGG | 0.541631 | 1.3:-68741137 | MS.gene49152:CDS |
| AAAAGTCCTAAAAGATGTGA+AGG | 0.543573 | 1.3:-68741193 | MS.gene49152:CDS |
| TAAACATCACTGCAATTCCA+TGG | 0.551788 | 1.3:+68737607 | None:intergenic |
| CGAGGCAGTACAAGCTAATG+AGG | 0.552124 | 1.3:-68741220 | MS.gene49152:CDS |
| GCACATCCAAAGGAAGTTCA+CGG | 0.562215 | 1.3:+68739739 | None:intergenic |
| GCCTCGTCATGGTAGTTCTG+GGG | 0.562928 | 1.3:+68741237 | None:intergenic |
| ACAATTGCAGGACAACTTGA+CGG | 0.568764 | 1.3:-68737706 | MS.gene49152:CDS |
| CAAATCAAACTTGAGACCAC+TGG | 0.570634 | 1.3:-68741066 | MS.gene49152:intron |
| CCTCGTCATGGTAGTTCTGG+GGG | 0.607116 | 1.3:+68741238 | None:intergenic |
| ATGATATCAAGCACATCCAA+AGG | 0.608076 | 1.3:+68739729 | None:intergenic |
| ATTCAATACCTTCCTGCCAA+AGG | 0.612236 | 1.3:-68741094 | MS.gene49152:CDS |
| GATCAAAGAATTTATACAAG+AGG | 0.613874 | 1.3:-68741171 | MS.gene49152:CDS |
| TAGCTTGTACTGCCTCGTCA+TGG | 0.617598 | 1.3:+68741226 | None:intergenic |
| AATTTATACAAGAGGTGCTG+CGG | 0.636068 | 1.3:-68741163 | MS.gene49152:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTATAAATAAGATTTAT+TGG | + | chr1.3:68741289-68741308 | None:intergenic | 10.0% |
| !! | ATTTATTTCATCAATAAAAA+TGG | + | chr1.3:68739981-68740000 | None:intergenic | 10.0% |
| !! | TATATTATCAGATTATATAA+TGG | - | chr1.3:68741045-68741064 | MS.gene49152:intron | 10.0% |
| !! | TATTTCAGAAATAAATAAAA+AGG | - | chr1.3:68738593-68738612 | MS.gene49152:intron | 10.0% |
| !!! | TTCTTTTTAATGAAATAATA+TGG | - | chr1.3:68741007-68741026 | MS.gene49152:intron | 10.0% |
| !! | ATTTATAGATTATAGTGTAA+CGG | - | chr1.3:68741298-68741317 | MS.gene49152:intron | 15.0% |
| !! | TATAAATAAGATTTATTGGT+TGG | + | chr1.3:68741285-68741304 | None:intergenic | 15.0% |
| !! | TATGAAATTTGAAGAATTAA+TGG | + | chr1.3:68738832-68738851 | None:intergenic | 15.0% |
| !!! | AACTTAAAGCATTAAATATT+AGG | + | chr1.3:68738358-68738377 | None:intergenic | 15.0% |
| !!! | ATTAATAGTTTGTTTACTTT+TGG | - | chr1.3:68739941-68739960 | MS.gene49152:intron | 15.0% |
| !!! | GTTTTATTATTCTGAATTAT+TGG | - | chr1.3:68737123-68737142 | MS.gene49152:intron | 15.0% |
| !!! | TATATATAGATTACTTTTTC+CGG | + | chr1.3:68737838-68737857 | None:intergenic | 15.0% |
| !!! | TGAAAAACTATATTTTAATG+TGG | - | chr1.3:68737909-68737928 | MS.gene49152:intron | 15.0% |
| !!! | TTATCATTTTTCTTTTTGTT+GGG | - | chr1.3:68738307-68738326 | MS.gene49152:intron | 15.0% |
| !! | AAAAAATTAAAGCCTAATGA+AGG | - | chr1.3:68740062-68740081 | MS.gene49152:intron | 20.0% |
| !! | ATCAAAATAGTCTCTAAATT+AGG | + | chr1.3:68737473-68737492 | None:intergenic | 20.0% |
| !! | ATTTCATCAATAAAAATGGA+AGG | + | chr1.3:68739977-68739996 | None:intergenic | 20.0% |
| !! | CAACAAAAAGAAAAATGATA+AGG | + | chr1.3:68738308-68738327 | None:intergenic | 20.0% |
| !! | TCAAAATAGTCTCTAAATTA+GGG | + | chr1.3:68737472-68737491 | None:intergenic | 20.0% |
| !! | TCGAAAAATATTCATAACTT+AGG | - | chr1.3:68740366-68740385 | MS.gene49152:intron | 20.0% |
| !! | TGATAATATCATAGAAAATG+AGG | + | chr1.3:68738555-68738574 | None:intergenic | 20.0% |
| !! | TTCACATGAAGAAAAAAAAA+AGG | - | chr1.3:68738455-68738474 | MS.gene49152:intron | 20.0% |
| !!! | AAAAATCAATTATTCGAGTT+AGG | + | chr1.3:68737093-68737112 | None:intergenic | 20.0% |
| !!! | AGTTTTGCACAATTAATTTA+TGG | - | chr1.3:68737495-68737514 | MS.gene49152:intron | 20.0% |
| !!! | CAATTTTAGACAAAGTATTA+AGG | - | chr1.3:68739813-68739832 | MS.gene49152:intron | 20.0% |
| !!! | CATTAAAAATTTTCTTTCTC+TGG | + | chr1.3:68740891-68740910 | None:intergenic | 20.0% |
| !!! | CTTATCATTTTTCTTTTTGT+TGG | - | chr1.3:68738306-68738325 | MS.gene49152:intron | 20.0% |
| !!! | GAAAGATTTTTTGTTTGTTT+TGG | - | chr1.3:68739841-68739860 | MS.gene49152:intron | 20.0% |
| !!! | GATTTTTTTTCTTTTTCACA+AGG | - | chr1.3:68740019-68740038 | MS.gene49152:intron | 20.0% |
| !!! | TATCATTTTTCTTTTTGTTG+GGG | - | chr1.3:68738308-68738327 | MS.gene49152:intron | 20.0% |
| !!! | TCAAGCAATAATAAACTTTT+TGG | + | chr1.3:68738894-68738913 | None:intergenic | 20.0% |
| !!! | TTATCCTCACTATATTTTTT+GGG | + | chr1.3:68740582-68740601 | None:intergenic | 20.0% |
| !!! | TTATTCTAAGTATCGAATTT+TGG | + | chr1.3:68740314-68740333 | None:intergenic | 20.0% |
| !!! | TTTTCATGTAATCAATTGAT+GGG | - | chr1.3:68737553-68737572 | MS.gene49152:intron | 20.0% |
| !!! | TTTTTCATGTAATCAATTGA+TGG | - | chr1.3:68737552-68737571 | MS.gene49152:intron | 20.0% |
| ! | AAAATATAGTGAGGATAACT+CGG | - | chr1.3:68740584-68740603 | MS.gene49152:intron | 25.0% |
| ! | AAACATAAGTCAAGATAACA+AGG | + | chr1.3:68737737-68737756 | None:intergenic | 25.0% |
| ! | AAATGTTAGAAAATGAACTG+TGG | - | chr1.3:68739997-68740016 | MS.gene49152:intron | 25.0% |
| ! | AACATAAGTCAAGATAACAA+GGG | + | chr1.3:68737736-68737755 | None:intergenic | 25.0% |
| ! | AATGATAAATTACTAACCAG+TGG | + | chr1.3:68737382-68737401 | None:intergenic | 25.0% |
| ! | AATTTACTGGAGAAATTTCT+TGG | - | chr1.3:68738795-68738814 | MS.gene49152:intron | 25.0% |
| ! | ACCTTCTTTATTCTTGTAAA+TGG | + | chr1.3:68739012-68739031 | None:intergenic | 25.0% |
| ! | ATCACAACAATGACAAAATT+AGG | + | chr1.3:68738636-68738655 | None:intergenic | 25.0% |
| ! | ATCACAATTAACTAACCTAA+GGG | + | chr1.3:68739352-68739371 | None:intergenic | 25.0% |
| ! | ATTACCATAATGATAAGACT+CGG | + | chr1.3:68739058-68739077 | None:intergenic | 25.0% |
| ! | CAAATTATTGGCAAACAAAA+AGG | + | chr1.3:68739757-68739776 | None:intergenic | 25.0% |
| ! | CTCGTAAAAGTTAAATTTCA+TGG | + | chr1.3:68740683-68740702 | None:intergenic | 25.0% |
| ! | CTTTATGTAGTGTTTATTCA+GGG | - | chr1.3:68739571-68739590 | MS.gene49152:intron | 25.0% |
| ! | GATCAAAGAATTTATACAAG+AGG | - | chr1.3:68737258-68737277 | MS.gene49152:intron | 25.0% |
| ! | TATACATTGAAAATGGGAAA+AGG | - | chr1.3:68738427-68738446 | MS.gene49152:intron | 25.0% |
| ! | TCCATTTACAAGAATAAAGA+AGG | - | chr1.3:68739008-68739027 | MS.gene49152:intron | 25.0% |
| ! | TGTGTATGAATTGAATATGT+TGG | - | chr1.3:68739916-68739935 | MS.gene49152:intron | 25.0% |
| ! | TTGAAGAATTAATGGTTCTT+GGG | + | chr1.3:68738824-68738843 | None:intergenic | 25.0% |
| ! | TTTATGTAGTGTTTATTCAG+GGG | - | chr1.3:68739572-68739591 | MS.gene49152:intron | 25.0% |
| ! | TTTGAAGAATTAATGGTTCT+TGG | + | chr1.3:68738825-68738844 | None:intergenic | 25.0% |
| !! | AAAGCATTAAATATTAGGCA+TGG | + | chr1.3:68738353-68738372 | None:intergenic | 25.0% |
| !! | AGTTGTGTCATTAGATAATA+TGG | - | chr1.3:68740972-68740991 | MS.gene49152:intron | 25.0% |
| !! | CTTATGTTGATACTTGTTAA+AGG | - | chr1.3:68741358-68741377 | MS.gene49152:intron | 25.0% |
| !! | CTTGAACATAACATTTTCAA+TGG | + | chr1.3:68740937-68740956 | None:intergenic | 25.0% |
| !! | GTTTTCAACTAATTGAACTT+TGG | - | chr1.3:68740407-68740426 | MS.gene49152:intron | 25.0% |
| !! | TTTTAGACATCTACAATATG+AGG | - | chr1.3:68739665-68739684 | MS.gene49152:intron | 25.0% |
| !! | TTTTTCACAAGGCAATTTAA+AGG | - | chr1.3:68740030-68740049 | MS.gene49152:intron | 25.0% |
| !!! | AACTTTTAGTGGTTGATTTA+AGG | - | chr1.3:68739376-68739395 | MS.gene49152:intron | 25.0% |
| !!! | CAATAATAAACTTTTTGGTC+GGG | + | chr1.3:68738889-68738908 | None:intergenic | 25.0% |
| !!! | CATTGCATTATTTTATGCTT+TGG | - | chr1.3:68739473-68739492 | MS.gene49152:intron | 25.0% |
| !!! | CTTATGTTGATACTTTTTTC+AGG | - | chr1.3:68741329-68741348 | MS.gene49152:intron | 25.0% |
| !!! | GCAATAATAAACTTTTTGGT+CGG | + | chr1.3:68738890-68738909 | None:intergenic | 25.0% |
| !!! | GTTATCCTCACTATATTTTT+TGG | + | chr1.3:68740583-68740602 | None:intergenic | 25.0% |
| !!! | GTTTGCTATACATTGAAAAT+GGG | - | chr1.3:68738421-68738440 | MS.gene49152:intron | 25.0% |
| !!! | TGTTTGCTATACATTGAAAA+TGG | - | chr1.3:68738420-68738439 | MS.gene49152:intron | 25.0% |
| !!! | TTTTGTTTGTTTTGGAAACA+AGG | - | chr1.3:68739849-68739868 | MS.gene49152:intron | 25.0% |
| AAAAGTCCTAAAAGATGTGA+AGG | - | chr1.3:68737236-68737255 | MS.gene49152:intron | 30.0% | |
| AACCATGAATTATGTCAAAC+TGG | - | chr1.3:68739437-68739456 | MS.gene49152:intron | 30.0% | |
| AACTATTCTGCACATTTGAT+TGG | - | chr1.3:68741188-68741207 | MS.gene49152:CDS | 30.0% | |
| AATATATGTTGTCACTACCA+AGG | - | chr1.3:68739248-68739267 | MS.gene49152:intron | 30.0% | |
| AATCAAATGTGCAGAATAGT+TGG | + | chr1.3:68741189-68741208 | None:intergenic | 30.0% | |
| AGATGTTTGTTTGGCAAAAA+TGG | - | chr1.3:68738508-68738527 | MS.gene49152:intron | 30.0% | |
| AGTCTAGTACAGTACTATTA+TGG | + | chr1.3:68741090-68741109 | None:intergenic | 30.0% | |
| ATGATAAGGATTAAAGACGT+AGG | + | chr1.3:68738294-68738313 | None:intergenic | 30.0% | |
| ATTAAGCTCAATGAAATCCT+AGG | + | chr1.3:68738113-68738132 | None:intergenic | 30.0% | |
| ATTCGTCAATAGGAAATGAA+CGG | - | chr1.3:68739190-68739209 | MS.gene49152:intron | 30.0% | |
| CACATAAGAGGTTAGAATTT+AGG | + | chr1.3:68740459-68740478 | None:intergenic | 30.0% | |
| CATCACAATTAACTAACCTA+AGG | + | chr1.3:68739353-68739372 | None:intergenic | 30.0% | |
| CCTGAATAAACACTACATAA+AGG | + | chr1.3:68739573-68739592 | None:intergenic | 30.0% | |
| CCTTTATGTAGTGTTTATTC+AGG | - | chr1.3:68739570-68739589 | MS.gene49152:intron | 30.0% | |
| CTAAGGGAAAATGTTTCATT+GGG | + | chr1.3:68739336-68739355 | None:intergenic | 30.0% | |
| GAAAAAAAAATCAAGCACAG+CGG | + | chr1.3:68738152-68738171 | None:intergenic | 30.0% | |
| GTAAGTTTATCAGTTGGAAA+AGG | + | chr1.3:68740915-68740934 | None:intergenic | 30.0% | |
| TAATCAGAGTAACCTTCATT+AGG | + | chr1.3:68740077-68740096 | None:intergenic | 30.0% | |
| TAATGAAGGTTACTCTGATT+AGG | - | chr1.3:68740076-68740095 | MS.gene49152:intron | 30.0% | |
| TCAATGGTAAGTTTATCAGT+TGG | + | chr1.3:68740921-68740940 | None:intergenic | 30.0% | |
| TCATCCCAAAAAATATAGTG+AGG | - | chr1.3:68740575-68740594 | MS.gene49152:intron | 30.0% | |
| TGGATTACTTATTCGTCAAT+AGG | - | chr1.3:68739180-68739199 | MS.gene49152:intron | 30.0% | |
| TGTCATTGTTGTGATCTAAA+GGG | - | chr1.3:68738641-68738660 | MS.gene49152:intron | 30.0% | |
| TTCCATGTTTAAGTGTACAT+TGG | + | chr1.3:68740552-68740571 | None:intergenic | 30.0% | |
| TTGGCAAACAAAAAGGAAAT+AGG | + | chr1.3:68739750-68739769 | None:intergenic | 30.0% | |
| TTGGCAAACAAAAAGGTAAT+AGG | + | chr1.3:68740295-68740314 | None:intergenic | 30.0% | |
| TTGTCATTGTTGTGATCTAA+AGG | - | chr1.3:68738640-68738659 | MS.gene49152:intron | 30.0% | |
| TTGTTTGCCAATAATTTGAC+AGG | - | chr1.3:68739759-68739778 | MS.gene49152:CDS | 30.0% | |
| ! | GATATCTATTTTCATCCTCA+TGG | + | chr1.3:68738394-68738413 | None:intergenic | 30.0% |
| ! | TAAGATTTATTGGTTGGAGT+CGG | + | chr1.3:68741279-68741298 | None:intergenic | 30.0% |
| ! | TTTGATCCTTCACATCTTTT+AGG | + | chr1.3:68737245-68737264 | None:intergenic | 30.0% |
| ! | TTTTCGAAGTTCTGTTATGA+AGG | + | chr1.3:68740353-68740372 | None:intergenic | 30.0% |
| !! | AGTTTGATTTGATGTTCCTT+TGG | + | chr1.3:68737354-68737373 | None:intergenic | 30.0% |
| !! | ATGTAATCAATTGATGGGTT+TGG | - | chr1.3:68737558-68737577 | MS.gene49152:intron | 30.0% |
| !! | TCGAATTTTGGCAAACAAAA+AGG | + | chr1.3:68740302-68740321 | None:intergenic | 30.0% |
| !! | TTCTAGCGGATATTTTATCA+TGG | - | chr1.3:68738954-68738973 | MS.gene49152:intron | 30.0% |
| !!! | TCACTATATTTTTTGGGATG+AGG | + | chr1.3:68740576-68740595 | None:intergenic | 30.0% |
| !!! | TTAGAGTGTTATTTTCCATG+AGG | - | chr1.3:68738376-68738395 | MS.gene49152:intron | 30.0% |
| !!! | TTTTTTCTCAGACGATTGTA+GGG | - | chr1.3:68738227-68738246 | MS.gene49152:intron | 30.0% |
| !!! | TTTTTTTCTCAGACGATTGT+AGG | - | chr1.3:68738226-68738245 | MS.gene49152:intron | 30.0% |
| AAAACACCAATCCAACATGA+AGG | + | chr1.3:68739649-68739668 | None:intergenic | 35.0% | |
| AAATAGAGTCCTAGATAGTG+TGG | + | chr1.3:68737771-68737790 | None:intergenic | 35.0% | |
| AACAAAAGTGGAAAGTGGAA+AGG | - | chr1.3:68738065-68738084 | MS.gene49152:intron | 35.0% | |
| ACTACTACAGTTGCAATCAA+CGG | + | chr1.3:68737882-68737901 | None:intergenic | 35.0% | |
| AGTATTATAACAGGGGTTAG+GGG | - | chr1.3:68737581-68737600 | MS.gene49152:intron | 35.0% | |
| AGTCTCTAAATTAGGGCATA+TGG | + | chr1.3:68737465-68737484 | None:intergenic | 35.0% | |
| AGTTCTGTTATGAAGGTGAA+CGG | + | chr1.3:68740346-68740365 | None:intergenic | 35.0% | |
| ATCAATCTCGAAATTGTGGT+TGG | - | chr1.3:68739160-68739179 | MS.gene49152:intron | 35.0% | |
| ATCTATGCTACATCTTCTAG+CGG | - | chr1.3:68738940-68738959 | MS.gene49152:intron | 35.0% | |
| ATGATATCAAGCACATCCAA+AGG | + | chr1.3:68738703-68738722 | None:intergenic | 35.0% | |
| ATGTAGTGTGTTAAAGCATG+GGG | - | chr1.3:68740648-68740667 | MS.gene49152:intron | 35.0% | |
| CACATAAAAAGGAACTTCCA+TGG | - | chr1.3:68740805-68740824 | MS.gene49152:intron | 35.0% | |
| CATGTAGTGTGTTAAAGCAT+GGG | - | chr1.3:68740647-68740666 | MS.gene49152:intron | 35.0% | |
| CATGTTTAAGTGTACATTGG+AGG | + | chr1.3:68740549-68740568 | None:intergenic | 35.0% | |
| CCTAAGGGAAAATGTTTCAT+TGG | + | chr1.3:68739337-68739356 | None:intergenic | 35.0% | |
| CTCCAATGTACACTTAAACA+TGG | - | chr1.3:68740547-68740566 | MS.gene49152:intron | 35.0% | |
| CTCCAGTTTGACATAATTCA+TGG | + | chr1.3:68739442-68739461 | None:intergenic | 35.0% | |
| CTGAAGAACACACTAATTGT+TGG | + | chr1.3:68738044-68738063 | None:intergenic | 35.0% | |
| GAGTATTATAACAGGGGTTA+GGG | - | chr1.3:68737580-68737599 | MS.gene49152:intron | 35.0% | |
| GTCGACAAAATCTAGTGTTT+GGG | + | chr1.3:68738728-68738747 | None:intergenic | 35.0% | |
| GTCTATCAATCTCGAAATTG+TGG | - | chr1.3:68739156-68739175 | MS.gene49152:intron | 35.0% | |
| GTGTTCTTCAGTAACAAAAG+TGG | - | chr1.3:68738053-68738072 | MS.gene49152:intron | 35.0% | |
| GTTGTGATCTAAAGGGAAAA+AGG | - | chr1.3:68738648-68738667 | MS.gene49152:intron | 35.0% | |
| TAAACATCACTGCAATTCCA+TGG | + | chr1.3:68740825-68740844 | None:intergenic | 35.0% | |
| TAAAGGGAAAAAGGTGAAGA+AGG | - | chr1.3:68738657-68738676 | MS.gene49152:intron | 35.0% | |
| TAGGAAACTGTCAATTAGTG+AGG | + | chr1.3:68738275-68738294 | None:intergenic | 35.0% | |
| TATGTCAAACTGGAGACTTT+GGG | - | chr1.3:68739447-68739466 | MS.gene49152:intron | 35.0% | |
| TCAGTAACAAAAGTGGAAAG+TGG | - | chr1.3:68738060-68738079 | MS.gene49152:intron | 35.0% | |
| TCATGTAGTGTGTTAAAGCA+TGG | - | chr1.3:68740646-68740665 | MS.gene49152:intron | 35.0% | |
| TCCTACTCCTGTCAAATTAT+TGG | + | chr1.3:68739769-68739788 | None:intergenic | 35.0% | |
| TGAAGTGAGTGCACATAAAA+AGG | - | chr1.3:68740794-68740813 | MS.gene49152:intron | 35.0% | |
| TGGAATTGCAGTGATGTTTA+TGG | - | chr1.3:68740825-68740844 | MS.gene49152:intron | 35.0% | |
| TTATGTCAAACTGGAGACTT+TGG | - | chr1.3:68739446-68739465 | MS.gene49152:intron | 35.0% | |
| TTCGTCAATAGGAAATGAAC+GGG | - | chr1.3:68739191-68739210 | MS.gene49152:intron | 35.0% | |
| TTCTAACCTCTTATGTGATC+TGG | - | chr1.3:68740462-68740481 | MS.gene49152:intron | 35.0% | |
| ! | AGCGGATATTTTATCATGGT+GGG | - | chr1.3:68738958-68738977 | MS.gene49152:intron | 35.0% |
| ! | AGGCTTTTCAGACAATTTAC+TGG | - | chr1.3:68738782-68738801 | MS.gene49152:intron | 35.0% |
| ! | ATTTAAGGTTCGACGAAGTA+AGG | - | chr1.3:68739391-68739410 | MS.gene49152:intron | 35.0% |
| ! | ATTTTGTCGCTCTATTTAGC+CGG | - | chr1.3:68737816-68737835 | MS.gene49152:intron | 35.0% |
| ! | CCAATGAAACATTTTCCCTT+AGG | - | chr1.3:68739334-68739353 | MS.gene49152:intron | 35.0% |
| ! | CTATTAGTTCTTCACTACCT+AGG | - | chr1.3:68738093-68738112 | MS.gene49152:intron | 35.0% |
| ! | GCGATTTGAAGTGCATAATA+TGG | - | chr1.3:68740180-68740199 | MS.gene49152:intron | 35.0% |
| ! | GGGTTTGGAGTATTATAACA+GGG | - | chr1.3:68737573-68737592 | MS.gene49152:intron | 35.0% |
| ! | GGTTTGGAGTATTATAACAG+GGG | - | chr1.3:68737574-68737593 | MS.gene49152:intron | 35.0% |
| ! | TAGGGGTTCATGCAATTTTA+TGG | - | chr1.3:68737598-68737617 | MS.gene49152:CDS | 35.0% |
| ! | TGCTGTTCTAGATGTTTGTT+TGG | - | chr1.3:68738499-68738518 | MS.gene49152:intron | 35.0% |
| ! | TGGGTTTGGAGTATTATAAC+AGG | - | chr1.3:68737572-68737591 | MS.gene49152:intron | 35.0% |
| ! | TTGCAACACTATGTTACTTG+TGG | - | chr1.3:68739712-68739731 | MS.gene49152:CDS | 35.0% |
| ! | TTGTGATGAGCAACTTTTAG+TGG | - | chr1.3:68739365-68739384 | MS.gene49152:intron | 35.0% |
| ! | TTTCTTTTTGTTGGGGAGTA+GGG | - | chr1.3:68738315-68738334 | MS.gene49152:intron | 35.0% |
| ! | TTTTCTTTTTGTTGGGGAGT+AGG | - | chr1.3:68738314-68738333 | MS.gene49152:intron | 35.0% |
| ! | TTTTTCTCAGACGATTGTAG+GGG | - | chr1.3:68738228-68738247 | MS.gene49152:intron | 35.0% |
| !! | AATAAACTTTTTGGTCGGGT+AGG | + | chr1.3:68738885-68738904 | None:intergenic | 35.0% |
| !! | AATTTATACAAGAGGTGCTG+CGG | - | chr1.3:68737266-68737285 | MS.gene49152:intron | 35.0% |
| !! | ATGCTCTGAGGAATTTATCT+TGG | - | chr1.3:68739101-68739120 | MS.gene49152:intron | 35.0% |
| !! | TAGCGGATATTTTATCATGG+TGG | - | chr1.3:68738957-68738976 | MS.gene49152:intron | 35.0% |
| !!! | TGGTTTTTTGCTGCTATCTT+TGG | - | chr1.3:68739124-68739143 | MS.gene49152:intron | 35.0% |
| AACGTCATGACTGTTTGTGA+TGG | - | chr1.3:68737951-68737970 | MS.gene49152:intron | 40.0% | |
| AAGGTTACTCTGATTAGGCA+AGG | - | chr1.3:68740081-68740100 | MS.gene49152:intron | 40.0% | |
| AAGTCAAGATAACAAGGGCT+GGG | + | chr1.3:68737731-68737750 | None:intergenic | 40.0% | |
| AATTCTTCCCGAGCATCTAT+GGG | - | chr1.3:68737673-68737692 | MS.gene49152:CDS | 40.0% | |
| ACAATTGCAGGACAACTTGA+CGG | - | chr1.3:68740723-68740742 | MS.gene49152:intron | 40.0% | |
| ACACACCGGCAAATTGAAAA+AGG | + | chr1.3:68738750-68738769 | None:intergenic | 40.0% | |
| AGCAACTCTATGTATGCACT+GGG | - | chr1.3:68739543-68739562 | MS.gene49152:intron | 40.0% | |
| AGCATCTATGGGGATGTAAT+TGG | - | chr1.3:68737684-68737703 | MS.gene49152:CDS | 40.0% | |
| AGGACTGTCTACTATCTAGT+AGG | + | chr1.3:68740523-68740542 | None:intergenic | 40.0% | |
| ATGATAAGACTCGGCTTCAA+AGG | + | chr1.3:68739049-68739068 | None:intergenic | 40.0% | |
| ATGCATTGAGCAACCCAAAT+AGG | - | chr1.3:68739508-68739527 | MS.gene49152:intron | 40.0% | |
| ATGTGCAGAATAGTTGGATC+TGG | + | chr1.3:68741183-68741202 | None:intergenic | 40.0% | |
| ATTACATCCCCATAGATGCT+CGG | + | chr1.3:68737684-68737703 | None:intergenic | 40.0% | |
| ATTCAATACCTTCCTGCCAA+AGG | - | chr1.3:68737335-68737354 | MS.gene49152:intron | 40.0% | |
| ATTGAGCAACCCAAATAGGT+GGG | - | chr1.3:68739512-68739531 | MS.gene49152:intron | 40.0% | |
| CAAATCAAACTTGAGACCAC+TGG | - | chr1.3:68737363-68737382 | MS.gene49152:intron | 40.0% | |
| CAAGTTCCTTCATGTTGGAT+TGG | - | chr1.3:68739640-68739659 | MS.gene49152:intron | 40.0% | |
| GCATTTGTCAAAAGCAAGCA+AGG | + | chr1.3:68739085-68739104 | None:intergenic | 40.0% | |
| GCCAATAATTTGACAGGAGT+AGG | - | chr1.3:68739765-68739784 | MS.gene49152:CDS | 40.0% | |
| GCTAAGAATGTGACAATTGC+AGG | - | chr1.3:68740711-68740730 | MS.gene49152:intron | 40.0% | |
| GGTCGACAAAATCTAGTGTT+TGG | + | chr1.3:68738729-68738748 | None:intergenic | 40.0% | |
| GTTTACTGTCCACACTATCT+AGG | - | chr1.3:68737759-68737778 | MS.gene49152:intron | 40.0% | |
| TAAATCTCGCAGCGAAATCT+GGG | + | chr1.3:68741159-68741178 | None:intergenic | 40.0% | |
| TAAGTCAAGATAACAAGGGC+TGG | + | chr1.3:68737732-68737751 | None:intergenic | 40.0% | |
| TAATTCTTCCCGAGCATCTA+TGG | - | chr1.3:68737672-68737691 | MS.gene49152:CDS | 40.0% | |
| TAGACCAAAGCTTCTTGCAT+AGG | - | chr1.3:68741109-68741128 | MS.gene49152:CDS | 40.0% | |
| TCAGAACCAGATCACATAAG+AGG | + | chr1.3:68740471-68740490 | None:intergenic | 40.0% | |
| TCGTCAATAGGAAATGAACG+GGG | - | chr1.3:68739192-68739211 | MS.gene49152:intron | 40.0% | |
| TCTCATATCCCCACCTATTT+GGG | + | chr1.3:68739524-68739543 | None:intergenic | 40.0% | |
| TGATAAGACTCGGCTTCAAA+GGG | + | chr1.3:68739048-68739067 | None:intergenic | 40.0% | |
| TGATTTGATGTTCCTTTGGC+AGG | + | chr1.3:68737350-68737369 | None:intergenic | 40.0% | |
| TTAAATCTCGCAGCGAAATC+TGG | + | chr1.3:68741160-68741179 | None:intergenic | 40.0% | |
| TTCTCTGGCAACAATTCACA+GGG | + | chr1.3:68740876-68740895 | None:intergenic | 40.0% | |
| TTGATTACGCTTCCAACTCA+AGG | - | chr1.3:68739615-68739634 | MS.gene49152:intron | 40.0% | |
| TTTCTCTGGCAACAATTCAC+AGG | + | chr1.3:68740877-68740896 | None:intergenic | 40.0% | |
| ! | ATGGATTAAGTTGCGACACT+CGG | - | chr1.3:68737514-68737533 | MS.gene49152:intron | 40.0% |
| ! | CAATTATTCGAGTTAGGACG+AGG | + | chr1.3:68737087-68737106 | None:intergenic | 40.0% |
| ! | CTCTGAGGAATTTATCTTGG+TGG | - | chr1.3:68739104-68739123 | MS.gene49152:intron | 40.0% |
| ! | GAAGCCGAGTCTTATCATTA+TGG | - | chr1.3:68739051-68739070 | MS.gene49152:intron | 40.0% |
| ! | GCGGATATTTTATCATGGTG+GGG | - | chr1.3:68738959-68738978 | MS.gene49152:intron | 40.0% |
| ! | GGAGTATTATAACAGGGGTT+AGG | - | chr1.3:68737579-68737598 | MS.gene49152:intron | 40.0% |
| ! | TGCTTTTGACAAATGCTCTG+AGG | - | chr1.3:68739089-68739108 | MS.gene49152:intron | 40.0% |
| ! | TTATTGGTTGGAGTCGGAAT+TGG | + | chr1.3:68741273-68741292 | None:intergenic | 40.0% |
| ! | TTCTTTTTGTTGGGGAGTAG+GGG | - | chr1.3:68738316-68738335 | MS.gene49152:intron | 40.0% |
| ! | TTGTGATGGAAAAGAACACG+AGG | - | chr1.3:68737965-68737984 | MS.gene49152:intron | 40.0% |
| !!! | GTCGACCTTTTTCAATTTGC+CGG | - | chr1.3:68738742-68738761 | MS.gene49152:intron | 40.0% |
| AATAGGAAATGAACGGGGGA+GGG | - | chr1.3:68739197-68739216 | MS.gene49152:intron | 45.0% | |
| ACGATTGTAGGGGAATTGCA+TGG | - | chr1.3:68738238-68738257 | MS.gene49152:intron | 45.0% | |
| AGAGAACCGTGAACTTCCTT+TGG | - | chr1.3:68738684-68738703 | MS.gene49152:intron | 45.0% | |
| AGGAGCAAGTTCCTTCATGT+TGG | - | chr1.3:68739635-68739654 | MS.gene49152:intron | 45.0% | |
| AGGCAAGGAGGATGAAACTT+TGG | - | chr1.3:68740096-68740115 | MS.gene49152:intron | 45.0% | |
| AGTCAAGATAACAAGGGCTG+GGG | + | chr1.3:68737730-68737749 | None:intergenic | 45.0% | |
| ATTCTTCCCGAGCATCTATG+GGG | - | chr1.3:68737674-68737693 | MS.gene49152:CDS | 45.0% | |
| CAAGCCTATGCAAGAAGCTT+TGG | + | chr1.3:68741116-68741135 | None:intergenic | 45.0% | |
| CATTGAGCAACCCAAATAGG+TGG | - | chr1.3:68739511-68739530 | MS.gene49152:intron | 45.0% | |
| CGTCAATAGGAAATGAACGG+GGG | - | chr1.3:68739193-68739212 | MS.gene49152:intron | 45.0% | |
| CTCTCATATCCCCACCTATT+TGG | + | chr1.3:68739525-68739544 | None:intergenic | 45.0% | |
| CTTCCAATTCTTGCACACAC+CGG | + | chr1.3:68738764-68738783 | None:intergenic | 45.0% | |
| CTTCTTGCATAGGCTTGCAA+CGG | - | chr1.3:68741119-68741138 | MS.gene49152:CDS | 45.0% | |
| GACGCTTTGACACTCTCTTA+TGG | + | chr1.3:68738186-68738205 | None:intergenic | 45.0% | |
| GAGCAACTCTATGTATGCAC+TGG | - | chr1.3:68739542-68739561 | MS.gene49152:intron | 45.0% | |
| GATAAGACTCGGCTTCAAAG+GGG | + | chr1.3:68739047-68739066 | None:intergenic | 45.0% | |
| GCACATCCAAAGGAAGTTCA+CGG | + | chr1.3:68738693-68738712 | None:intergenic | 45.0% | |
| GGAAAACTTTCTGACTGCAG+AGG | + | chr1.3:68737861-68737880 | None:intergenic | 45.0% | |
| GGAGTAGGAAAAGCTTGCAA+TGG | - | chr1.3:68739780-68739799 | MS.gene49152:intron | 45.0% | |
| GGCAAGGAGGATGAAACTTT+GGG | - | chr1.3:68740097-68740116 | MS.gene49152:intron | 45.0% | |
| GTAGGGGAATTGCATGGAAA+TGG | - | chr1.3:68738244-68738263 | MS.gene49152:intron | 45.0% | |
| GTTACTCTGATTAGGCAAGG+AGG | - | chr1.3:68740084-68740103 | MS.gene49152:intron | 45.0% | |
| TAAGTGTACATTGGAGGCAG+AGG | + | chr1.3:68740543-68740562 | None:intergenic | 45.0% | |
| TCACTACCAAGGCCAACATA+GGG | - | chr1.3:68739259-68739278 | MS.gene49152:intron | 45.0% | |
| TCTGTTATGAAGGTGAACGG+TGG | + | chr1.3:68740343-68740362 | None:intergenic | 45.0% | |
| TTACATCCCCATAGATGCTC+GGG | + | chr1.3:68737683-68737702 | None:intergenic | 45.0% | |
| TTGAGCAACCCAAATAGGTG+GGG | - | chr1.3:68739513-68739532 | MS.gene49152:intron | 45.0% | |
| TTGATGTTCCTTTGGCAGGA+AGG | + | chr1.3:68737346-68737365 | None:intergenic | 45.0% | |
| ! | AAGGAACTTGCTCCTTGAGT+TGG | + | chr1.3:68739630-68739649 | None:intergenic | 45.0% |
| ! | ACTTTGAGAGTTGCGCCAAA+TGG | + | chr1.3:68740134-68740153 | None:intergenic | 45.0% |
| ! | AGGAGGATGAAACTTTGGGA+AGG | - | chr1.3:68740101-68740120 | MS.gene49152:intron | 45.0% |
| ! | GAGGATGAAACTTTGGGAAG+GGG | - | chr1.3:68740103-68740122 | MS.gene49152:intron | 45.0% |
| ! | GGAGGATGAAACTTTGGGAA+GGG | - | chr1.3:68740102-68740121 | MS.gene49152:intron | 45.0% |
| AGAGTCAAGGAGCTGCTTGA+AGG | - | chr1.3:68737291-68737310 | MS.gene49152:intron | 50.0% | |
| AGATAACAAGGGCTGGGGAA+TGG | + | chr1.3:68737725-68737744 | None:intergenic | 50.0% | |
| ATAACAAGGGCTGGGGAATG+GGG | + | chr1.3:68737723-68737742 | None:intergenic | 50.0% | |
| CAAGCTGAGTACCCCTATGT+TGG | + | chr1.3:68739274-68739293 | None:intergenic | 50.0% | |
| CAATAGGAAATGAACGGGGG+AGG | - | chr1.3:68739196-68739215 | MS.gene49152:intron | 50.0% | |
| CACTACCAAGGCCAACATAG+GGG | - | chr1.3:68739260-68739279 | MS.gene49152:intron | 50.0% | |
| CGAGGCAGTACAAGCTAATG+AGG | - | chr1.3:68737209-68737228 | MS.gene49152:intron | 50.0% | |
| CGGTGTGTGCAAGAATTGGA+AGG | - | chr1.3:68738762-68738781 | MS.gene49152:intron | 50.0% | |
| GAGTCAAGGAGCTGCTTGAA+GGG | - | chr1.3:68737292-68737311 | MS.gene49152:intron | 50.0% | |
| GATAACAAGGGCTGGGGAAT+GGG | + | chr1.3:68737724-68737743 | None:intergenic | 50.0% | |
| GTCACTACCAAGGCCAACAT+AGG | - | chr1.3:68739258-68739277 | MS.gene49152:intron | 50.0% | |
| TGCCTCGTCATGGTAGTTCT+GGG | + | chr1.3:68737196-68737215 | None:intergenic | 50.0% | |
| TGGGAAGGGGATGAACCATT+TGG | - | chr1.3:68740116-68740135 | MS.gene49152:intron | 50.0% | |
| TTGCCGGTGTGTGCAAGAAT+TGG | - | chr1.3:68738758-68738777 | MS.gene49152:intron | 50.0% | |
| TTGGTCGGGTAGGCTAATCA+AGG | + | chr1.3:68738875-68738894 | None:intergenic | 50.0% | |
| TTGGTTGGAGTCGGAATTGG+AGG | + | chr1.3:68741270-68741289 | None:intergenic | 50.0% | |
| ! | TAGCTTGTACTGCCTCGTCA+TGG | + | chr1.3:68737206-68737225 | None:intergenic | 50.0% |
| ! | TGTTTTACGCGAGCGAGCAT+TGG | - | chr1.3:68737636-68737655 | MS.gene49152:CDS | 50.0% |
| CTGCCTCGTCATGGTAGTTC+TGG | + | chr1.3:68737197-68737216 | None:intergenic | 55.0% | |
| GGCTTGCAACGGTTGTGTCA+TGG | - | chr1.3:68741130-68741149 | MS.gene49152:CDS | 55.0% | |
| ! | GAGTACCCCTATGTTGGCCT+TGG | + | chr1.3:68739268-68739287 | None:intergenic | 55.0% |
| ! | GCCTCGTCATGGTAGTTCTG+GGG | + | chr1.3:68737195-68737214 | None:intergenic | 55.0% |
| !! | ACGCGAGCGAGCATTGGAAA+GGG | - | chr1.3:68737642-68737661 | MS.gene49152:CDS | 55.0% |
| !! | CCTCGTCATGGTAGTTCTGG+GGG | + | chr1.3:68737194-68737213 | None:intergenic | 55.0% |
| !! | TACGCGAGCGAGCATTGGAA+AGG | - | chr1.3:68737641-68737660 | MS.gene49152:CDS | 55.0% |
| AGGAAATGAACGGGGGAGGG+TGG | - | chr1.3:68739200-68739219 | MS.gene49152:intron | 60.0% | |
| CCCCCAGAACTACCATGACG+AGG | - | chr1.3:68737191-68737210 | MS.gene49152:intron | 60.0% | |
| ! | AGGTGCTGCGGCAAGAGTCA+AGG | - | chr1.3:68737278-68737297 | MS.gene49152:intron | 60.0% |
| ! | GGGGAGGGTGGTTGACTTTG+TGG | - | chr1.3:68739212-68739231 | MS.gene49152:intron | 60.0% |
| !! | CGAGCGAGCATTGGAAAGGG+TGG | - | chr1.3:68737645-68737664 | MS.gene49152:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 68737074 | 68741377 | 68737074 | ID=MS.gene49152 |
| chr1.3 | mRNA | 68737074 | 68741377 | 68737074 | ID=MS.gene49152.t1;Parent=MS.gene49152 |
| chr1.3 | exon | 68741375 | 68741377 | 68741375 | ID=MS.gene49152.t1.exon1;Parent=MS.gene49152.t1 |
| chr1.3 | CDS | 68741375 | 68741377 | 68741375 | ID=cds.MS.gene49152.t1;Parent=MS.gene49152.t1 |
| chr1.3 | exon | 68741067 | 68741262 | 68741067 | ID=MS.gene49152.t1.exon2;Parent=MS.gene49152.t1 |
| chr1.3 | CDS | 68741067 | 68741262 | 68741067 | ID=cds.MS.gene49152.t1;Parent=MS.gene49152.t1 |
| chr1.3 | exon | 68739688 | 68739789 | 68739688 | ID=MS.gene49152.t1.exon3;Parent=MS.gene49152.t1 |
| chr1.3 | CDS | 68739688 | 68739789 | 68739688 | ID=cds.MS.gene49152.t1;Parent=MS.gene49152.t1 |
| chr1.3 | exon | 68737591 | 68737748 | 68737591 | ID=MS.gene49152.t1.exon4;Parent=MS.gene49152.t1 |
| chr1.3 | CDS | 68737591 | 68737748 | 68737591 | ID=cds.MS.gene49152.t1;Parent=MS.gene49152.t1 |
| chr1.3 | exon | 68737074 | 68737100 | 68737074 | ID=MS.gene49152.t1.exon5;Parent=MS.gene49152.t1 |
| chr1.3 | CDS | 68737074 | 68737100 | 68737074 | ID=cds.MS.gene49152.t1;Parent=MS.gene49152.t1 |
| Gene Sequence |
| Protein sequence |
