Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49162.t1 | AES62434.1 | 89.1 | 312 | 33 | 1 | 1 | 311 | 1 | 312 | 9.90E-128 | 466.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49162.t1 | Q9FLX8 | 70.2 | 104 | 31 | 0 | 172 | 275 | 153 | 256 | 5.3e-37 | 156.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49162.t1 | G7IDY1 | 89.1 | 312 | 33 | 1 | 1 | 311 | 1 | 312 | 7.1e-128 | 466.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene49162.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49162.t1 | MTR_1g099600 | 95.513 | 312 | 13 | 1 | 1 | 311 | 1 | 312 | 0.0 | 521 |
MS.gene49162.t1 | MTR_8g028565 | 67.544 | 114 | 34 | 2 | 160 | 271 | 132 | 244 | 5.62e-46 | 159 |
MS.gene49162.t1 | MTR_7g079040 | 56.291 | 151 | 55 | 4 | 161 | 302 | 132 | 280 | 7.42e-46 | 158 |
MS.gene49162.t1 | MTR_2g032030 | 55.738 | 122 | 40 | 2 | 164 | 276 | 238 | 354 | 4.61e-38 | 140 |
MS.gene49162.t1 | MTR_2g032030 | 55.738 | 122 | 40 | 2 | 164 | 276 | 238 | 354 | 1.39e-37 | 139 |
MS.gene49162.t1 | MTR_8g098945 | 44.809 | 183 | 84 | 7 | 137 | 311 | 84 | 257 | 1.66e-35 | 129 |
MS.gene49162.t1 | MTR_2g024380 | 50.420 | 119 | 55 | 3 | 163 | 277 | 229 | 347 | 5.10e-32 | 124 |
MS.gene49162.t1 | MTR_7g109600 | 40.260 | 154 | 70 | 2 | 147 | 292 | 8 | 147 | 6.61e-32 | 120 |
MS.gene49162.t1 | MTR_8g069935 | 38.012 | 171 | 87 | 5 | 116 | 275 | 254 | 416 | 1.56e-29 | 117 |
MS.gene49162.t1 | MTR_2g024350 | 50.495 | 101 | 47 | 2 | 180 | 277 | 4 | 104 | 8.40e-29 | 110 |
MS.gene49162.t1 | MTR_8g067635 | 53.061 | 98 | 44 | 2 | 159 | 254 | 323 | 420 | 3.31e-28 | 114 |
MS.gene49162.t1 | MTR_8g087000 | 42.446 | 139 | 65 | 3 | 123 | 259 | 26 | 151 | 6.67e-28 | 108 |
MS.gene49162.t1 | MTR_8g087000 | 42.143 | 140 | 65 | 3 | 123 | 259 | 26 | 152 | 7.11e-28 | 108 |
MS.gene49162.t1 | MTR_8g067650 | 53.684 | 95 | 42 | 2 | 162 | 254 | 316 | 410 | 1.19e-27 | 112 |
MS.gene49162.t1 | MTR_2g016770 | 56.522 | 92 | 33 | 2 | 163 | 248 | 9 | 99 | 2.32e-27 | 106 |
MS.gene49162.t1 | MTR_2g016770 | 70.769 | 65 | 19 | 0 | 184 | 248 | 27 | 91 | 3.19e-27 | 105 |
MS.gene49162.t1 | MTR_6g053200 | 46.154 | 117 | 59 | 3 | 133 | 247 | 279 | 393 | 1.51e-26 | 109 |
MS.gene49162.t1 | MTR_5g016610 | 58.824 | 85 | 29 | 2 | 163 | 242 | 174 | 257 | 9.34e-26 | 103 |
MS.gene49162.t1 | MTR_4g094908 | 54.118 | 85 | 34 | 1 | 163 | 242 | 240 | 324 | 8.71e-25 | 102 |
MS.gene49162.t1 | MTR_2g083870 | 52.747 | 91 | 33 | 1 | 164 | 244 | 50 | 140 | 1.02e-24 | 100 |
MS.gene49162.t1 | MTR_1g070455 | 67.797 | 59 | 19 | 0 | 185 | 243 | 294 | 352 | 4.51e-23 | 98.2 |
MS.gene49162.t1 | MTR_4g127040 | 51.807 | 83 | 35 | 1 | 165 | 242 | 221 | 303 | 1.11e-22 | 96.3 |
MS.gene49162.t1 | MTR_1g009613 | 48.750 | 80 | 40 | 1 | 162 | 241 | 241 | 319 | 1.71e-21 | 93.6 |
MS.gene49162.t1 | MTR_0117s0040 | 36.719 | 128 | 76 | 3 | 117 | 241 | 6 | 131 | 7.39e-21 | 89.7 |
MS.gene49162.t1 | MTR_7g011820 | 45.652 | 92 | 49 | 1 | 158 | 249 | 384 | 474 | 1.03e-19 | 89.7 |
MS.gene49162.t1 | MTR_7g011820 | 43.077 | 65 | 35 | 2 | 180 | 244 | 224 | 286 | 1.35e-11 | 65.5 |
MS.gene49162.t1 | MTR_3g108960 | 44.578 | 83 | 45 | 1 | 159 | 241 | 290 | 371 | 8.24e-19 | 86.7 |
MS.gene49162.t1 | MTR_4g130900 | 45.783 | 83 | 43 | 2 | 166 | 247 | 340 | 421 | 8.90e-19 | 87.0 |
MS.gene49162.t1 | MTR_7g080020 | 36.364 | 121 | 60 | 3 | 166 | 285 | 474 | 578 | 1.43e-17 | 83.6 |
MS.gene49162.t1 | MTR_7g080020 | 45.205 | 73 | 38 | 2 | 172 | 244 | 268 | 338 | 1.33e-14 | 74.7 |
MS.gene49162.t1 | MTR_3g053330 | 38.835 | 103 | 61 | 1 | 181 | 281 | 248 | 350 | 3.26e-17 | 82.0 |
MS.gene49162.t1 | MTR_7g062220 | 51.429 | 70 | 31 | 2 | 172 | 241 | 114 | 180 | 1.24e-16 | 79.3 |
MS.gene49162.t1 | MTR_4g082580 | 45.455 | 77 | 40 | 2 | 172 | 247 | 265 | 340 | 2.75e-16 | 79.0 |
MS.gene49162.t1 | MTR_4g082580 | 41.176 | 68 | 39 | 1 | 177 | 244 | 138 | 204 | 1.00e-11 | 65.5 |
MS.gene49162.t1 | MTR_7g110720 | 46.575 | 73 | 39 | 0 | 182 | 254 | 187 | 259 | 2.87e-16 | 79.0 |
MS.gene49162.t1 | MTR_7g110720 | 46.575 | 73 | 39 | 0 | 182 | 254 | 214 | 286 | 3.10e-16 | 79.0 |
MS.gene49162.t1 | MTR_5g042920 | 44.156 | 77 | 41 | 2 | 172 | 247 | 307 | 382 | 3.47e-16 | 79.0 |
MS.gene49162.t1 | MTR_5g042920 | 42.647 | 68 | 37 | 2 | 177 | 244 | 144 | 209 | 1.85e-11 | 64.7 |
MS.gene49162.t1 | MTR_2g045360 | 43.678 | 87 | 49 | 0 | 184 | 270 | 211 | 297 | 4.05e-16 | 79.0 |
MS.gene49162.t1 | MTR_5g097490 | 40.217 | 92 | 53 | 2 | 170 | 260 | 237 | 327 | 4.92e-16 | 78.2 |
MS.gene49162.t1 | MTR_5g097490 | 39.080 | 87 | 51 | 2 | 158 | 244 | 66 | 150 | 9.91e-12 | 65.5 |
MS.gene49162.t1 | MTR_3g009470 | 42.353 | 85 | 47 | 2 | 166 | 249 | 476 | 559 | 6.04e-16 | 78.6 |
MS.gene49162.t1 | MTR_3g009470 | 49.315 | 73 | 34 | 3 | 183 | 254 | 279 | 349 | 3.71e-13 | 70.5 |
MS.gene49162.t1 | MTR_7g100510 | 44.737 | 76 | 40 | 2 | 179 | 254 | 184 | 257 | 7.04e-16 | 78.2 |
MS.gene49162.t1 | MTR_7g100510 | 40.816 | 98 | 42 | 3 | 162 | 244 | 324 | 420 | 2.62e-15 | 76.3 |
MS.gene49162.t1 | MTR_7g080000 | 41.667 | 84 | 47 | 2 | 165 | 247 | 412 | 494 | 9.41e-16 | 78.2 |
MS.gene49162.t1 | MTR_7g080000 | 45.205 | 73 | 38 | 2 | 172 | 244 | 222 | 292 | 3.97e-15 | 76.3 |
MS.gene49162.t1 | MTR_1g086790 | 49.275 | 69 | 33 | 2 | 185 | 252 | 159 | 226 | 1.61e-15 | 76.3 |
MS.gene49162.t1 | MTR_4g013260 | 42.169 | 83 | 46 | 2 | 166 | 247 | 317 | 398 | 1.73e-15 | 77.0 |
MS.gene49162.t1 | MTR_4g013260 | 32.000 | 125 | 69 | 2 | 185 | 309 | 185 | 293 | 2.32e-13 | 70.9 |
MS.gene49162.t1 | MTR_4g094588 | 48.649 | 74 | 37 | 1 | 185 | 258 | 179 | 251 | 2.67e-15 | 75.9 |
MS.gene49162.t1 | MTR_2g088000 | 50.000 | 64 | 32 | 0 | 181 | 244 | 346 | 409 | 4.94e-15 | 75.9 |
MS.gene49162.t1 | MTR_3g031220 | 38.542 | 96 | 57 | 2 | 166 | 260 | 346 | 440 | 5.59e-15 | 75.5 |
MS.gene49162.t1 | MTR_3g031220 | 44.444 | 63 | 33 | 2 | 183 | 245 | 197 | 257 | 2.43e-11 | 64.7 |
MS.gene49162.t1 | MTR_3g056100 | 46.269 | 67 | 35 | 1 | 181 | 247 | 412 | 477 | 6.36e-15 | 75.5 |
MS.gene49162.t1 | MTR_3g056100 | 38.961 | 77 | 45 | 2 | 177 | 253 | 236 | 310 | 4.10e-11 | 63.9 |
MS.gene49162.t1 | MTR_3g056100 | 46.269 | 67 | 35 | 1 | 181 | 247 | 399 | 464 | 6.46e-15 | 75.5 |
MS.gene49162.t1 | MTR_3g056100 | 38.961 | 77 | 45 | 2 | 177 | 253 | 236 | 310 | 4.02e-11 | 63.9 |
MS.gene49162.t1 | MTR_4g049760 | 45.205 | 73 | 40 | 0 | 182 | 254 | 288 | 360 | 6.77e-15 | 75.5 |
MS.gene49162.t1 | MTR_3g056100 | 35.345 | 116 | 62 | 3 | 181 | 287 | 268 | 379 | 6.94e-15 | 75.1 |
MS.gene49162.t1 | MTR_3g056100 | 38.961 | 77 | 45 | 2 | 177 | 253 | 92 | 166 | 5.27e-11 | 63.5 |
MS.gene49162.t1 | MTR_3g056100 | 35.345 | 116 | 62 | 3 | 181 | 287 | 255 | 366 | 6.96e-15 | 75.1 |
MS.gene49162.t1 | MTR_3g056100 | 38.961 | 77 | 45 | 2 | 177 | 253 | 92 | 166 | 5.15e-11 | 63.5 |
MS.gene49162.t1 | MTR_5g094430 | 46.479 | 71 | 34 | 2 | 185 | 252 | 365 | 434 | 7.40e-15 | 75.5 |
MS.gene49162.t1 | MTR_2g023930 | 49.206 | 63 | 32 | 0 | 182 | 244 | 303 | 365 | 7.47e-15 | 75.5 |
MS.gene49162.t1 | MTR_5g091390 | 52.459 | 61 | 28 | 1 | 185 | 245 | 158 | 217 | 9.60e-15 | 73.9 |
MS.gene49162.t1 | MTR_5g094430 | 46.479 | 71 | 34 | 2 | 185 | 252 | 253 | 322 | 9.68e-15 | 74.7 |
MS.gene49162.t1 | MTR_5g094430 | 46.479 | 71 | 34 | 2 | 185 | 252 | 231 | 300 | 1.08e-14 | 74.3 |
MS.gene49162.t1 | MTR_4g007060 | 41.333 | 75 | 44 | 0 | 182 | 256 | 126 | 200 | 1.16e-14 | 73.2 |
MS.gene49162.t1 | MTR_4g007060 | 41.333 | 75 | 44 | 0 | 182 | 256 | 160 | 234 | 1.27e-14 | 73.6 |
MS.gene49162.t1 | MTR_5g074400 | 41.176 | 85 | 48 | 2 | 166 | 249 | 401 | 484 | 1.47e-14 | 74.3 |
MS.gene49162.t1 | MTR_5g074400 | 48.387 | 62 | 30 | 2 | 183 | 244 | 242 | 301 | 7.32e-12 | 66.2 |
MS.gene49162.t1 | MTR_5g043880 | 42.222 | 90 | 44 | 3 | 158 | 241 | 93 | 180 | 1.59e-14 | 72.8 |
MS.gene49162.t1 | MTR_8g092010 | 39.759 | 83 | 47 | 2 | 164 | 244 | 86 | 167 | 1.59e-14 | 70.9 |
MS.gene49162.t1 | MTR_4g132430 | 34.351 | 131 | 73 | 2 | 185 | 303 | 128 | 257 | 1.68e-14 | 73.6 |
MS.gene49162.t1 | MTR_1g015140 | 52.632 | 57 | 26 | 1 | 185 | 241 | 103 | 158 | 1.89e-14 | 70.5 |
MS.gene49162.t1 | MTR_4g094412 | 50.820 | 61 | 30 | 0 | 185 | 245 | 235 | 295 | 1.98e-14 | 73.9 |
MS.gene49162.t1 | MTR_4g094412 | 50.820 | 61 | 30 | 0 | 185 | 245 | 244 | 304 | 2.24e-14 | 73.6 |
MS.gene49162.t1 | MTR_7g071120 | 37.624 | 101 | 60 | 3 | 163 | 262 | 302 | 400 | 2.51e-14 | 73.6 |
MS.gene49162.t1 | MTR_7g071120 | 45.161 | 62 | 32 | 2 | 183 | 244 | 165 | 224 | 9.69e-12 | 65.9 |
MS.gene49162.t1 | MTR_8g099350 | 41.176 | 85 | 43 | 2 | 162 | 239 | 105 | 189 | 2.58e-14 | 73.2 |
MS.gene49162.t1 | MTR_3g090860 | 52.632 | 57 | 25 | 1 | 185 | 239 | 134 | 190 | 2.70e-14 | 72.8 |
MS.gene49162.t1 | MTR_3g106060 | 38.824 | 85 | 52 | 0 | 185 | 269 | 139 | 223 | 2.90e-14 | 72.4 |
MS.gene49162.t1 | MTR_4g132430 | 38.053 | 113 | 56 | 3 | 185 | 283 | 262 | 374 | 3.55e-14 | 73.2 |
MS.gene49162.t1 | MTR_4g049790 | 43.836 | 73 | 41 | 0 | 182 | 254 | 310 | 382 | 4.15e-14 | 73.2 |
MS.gene49162.t1 | MTR_4g107970 | 40.449 | 89 | 48 | 2 | 156 | 244 | 155 | 238 | 5.30e-14 | 72.8 |
MS.gene49162.t1 | MTR_7g109800 | 40.860 | 93 | 53 | 2 | 185 | 276 | 146 | 237 | 6.62e-14 | 71.2 |
MS.gene49162.t1 | MTR_7g009730 | 38.095 | 105 | 60 | 2 | 150 | 254 | 190 | 289 | 8.67e-14 | 72.0 |
MS.gene49162.t1 | MTR_4g122530 | 45.902 | 61 | 32 | 1 | 185 | 245 | 209 | 268 | 8.73e-14 | 71.6 |
MS.gene49162.t1 | MTR_4g107970 | 40.449 | 89 | 48 | 2 | 156 | 244 | 232 | 315 | 9.05e-14 | 72.0 |
MS.gene49162.t1 | MTR_3g095040 | 46.667 | 60 | 31 | 1 | 185 | 244 | 119 | 177 | 9.79e-14 | 69.3 |
MS.gene49162.t1 | MTR_2g033820 | 47.541 | 61 | 31 | 1 | 185 | 245 | 204 | 263 | 1.58e-13 | 70.9 |
MS.gene49162.t1 | MTR_2g105060 | 34.615 | 104 | 65 | 1 | 182 | 285 | 92 | 192 | 2.07e-13 | 68.9 |
MS.gene49162.t1 | MTR_2g105060 | 34.615 | 104 | 65 | 1 | 182 | 285 | 167 | 267 | 3.19e-13 | 69.3 |
MS.gene49162.t1 | MTR_8g007270 | 40.506 | 79 | 45 | 2 | 165 | 242 | 134 | 211 | 3.27e-13 | 68.2 |
MS.gene49162.t1 | MTR_3g009470 | 49.315 | 73 | 34 | 3 | 183 | 254 | 279 | 349 | 3.46e-13 | 70.1 |
MS.gene49162.t1 | MTR_3g104750 | 50.877 | 57 | 27 | 1 | 185 | 241 | 105 | 160 | 3.93e-13 | 66.6 |
MS.gene49162.t1 | MTR_7g079010 | 43.750 | 64 | 35 | 1 | 178 | 241 | 135 | 197 | 4.73e-13 | 67.8 |
MS.gene49162.t1 | MTR_1g013760 | 36.842 | 76 | 48 | 0 | 185 | 260 | 141 | 216 | 5.21e-13 | 68.6 |
MS.gene49162.t1 | MTR_7g109600 | 39.326 | 89 | 40 | 1 | 204 | 292 | 7 | 81 | 5.39e-13 | 67.0 |
MS.gene49162.t1 | MTR_1g078260 | 42.553 | 94 | 43 | 5 | 172 | 255 | 234 | 326 | 5.59e-13 | 69.7 |
MS.gene49162.t1 | MTR_8g087000 | 51.786 | 56 | 27 | 0 | 204 | 259 | 35 | 90 | 9.11e-13 | 66.2 |
MS.gene49162.t1 | MTR_8g027860 | 38.947 | 95 | 46 | 3 | 163 | 245 | 110 | 204 | 1.30e-12 | 67.8 |
MS.gene49162.t1 | MTR_1g077780 | 44.615 | 65 | 35 | 1 | 181 | 245 | 59 | 122 | 1.32e-12 | 64.7 |
MS.gene49162.t1 | MTR_1g013790 | 33.962 | 106 | 68 | 2 | 185 | 289 | 102 | 206 | 1.77e-12 | 66.6 |
MS.gene49162.t1 | MTR_7g117200 | 44.928 | 69 | 32 | 2 | 185 | 247 | 119 | 187 | 4.24e-12 | 66.2 |
MS.gene49162.t1 | MTR_5g097500 | 44.286 | 70 | 38 | 1 | 178 | 247 | 224 | 292 | 4.86e-12 | 65.9 |
MS.gene49162.t1 | MTR_5g067680 | 50.877 | 57 | 26 | 1 | 185 | 239 | 203 | 259 | 4.91e-12 | 66.2 |
MS.gene49162.t1 | MTR_7g028415 | 42.623 | 61 | 34 | 1 | 181 | 241 | 90 | 149 | 7.29e-12 | 63.2 |
MS.gene49162.t1 | MTR_7g028710 | 42.623 | 61 | 34 | 1 | 181 | 241 | 90 | 149 | 7.29e-12 | 63.2 |
MS.gene49162.t1 | MTR_6g086555 | 49.180 | 61 | 29 | 2 | 185 | 244 | 207 | 266 | 9.77e-12 | 65.5 |
MS.gene49162.t1 | MTR_8g092140 | 46.552 | 58 | 30 | 1 | 185 | 242 | 161 | 217 | 1.07e-11 | 63.9 |
MS.gene49162.t1 | MTR_5g067700 | 41.250 | 80 | 40 | 2 | 162 | 239 | 89 | 163 | 1.64e-11 | 63.5 |
MS.gene49162.t1 | MTR_3g095080 | 46.552 | 58 | 30 | 1 | 185 | 242 | 169 | 225 | 1.88e-11 | 63.5 |
MS.gene49162.t1 | MTR_3g031220 | 44.444 | 63 | 33 | 2 | 183 | 245 | 197 | 257 | 1.90e-11 | 64.7 |
MS.gene49162.t1 | MTR_3g095080 | 46.552 | 58 | 30 | 1 | 185 | 242 | 145 | 201 | 2.14e-11 | 62.8 |
MS.gene49162.t1 | MTR_7g105000 | 58.333 | 48 | 20 | 0 | 157 | 204 | 293 | 340 | 4.32e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49162.t1 | AT5G52830 | 75.229 | 109 | 23 | 1 | 162 | 266 | 143 | 251 | 4.22e-53 | 177 |
MS.gene49162.t1 | AT4G01250 | 40.755 | 265 | 85 | 8 | 1 | 257 | 1 | 201 | 4.99e-50 | 168 |
MS.gene49162.t1 | AT4G23550 | 62.745 | 102 | 38 | 0 | 169 | 270 | 125 | 226 | 5.45e-39 | 139 |
MS.gene49162.t1 | AT1G30650 | 46.067 | 178 | 67 | 5 | 156 | 305 | 177 | 353 | 2.23e-36 | 135 |
MS.gene49162.t1 | AT2G34830 | 56.757 | 111 | 39 | 1 | 151 | 252 | 173 | 283 | 2.99e-36 | 135 |
MS.gene49162.t1 | AT2G34830 | 56.757 | 111 | 39 | 1 | 151 | 252 | 182 | 292 | 3.23e-36 | 135 |
MS.gene49162.t1 | AT5G45050 | 43.716 | 183 | 85 | 4 | 140 | 310 | 1003 | 1179 | 6.88e-33 | 129 |
MS.gene49162.t1 | AT5G45050 | 43.716 | 183 | 85 | 4 | 140 | 310 | 1114 | 1290 | 7.35e-33 | 129 |
MS.gene49162.t1 | AT5G45050 | 43.716 | 183 | 85 | 4 | 140 | 310 | 1142 | 1318 | 7.45e-33 | 129 |
MS.gene49162.t1 | AT1G29280 | 65.278 | 72 | 20 | 1 | 184 | 255 | 74 | 140 | 9.17e-26 | 103 |
MS.gene49162.t1 | AT3G58710 | 58.537 | 82 | 26 | 1 | 184 | 257 | 71 | 152 | 1.46e-25 | 103 |
MS.gene49162.t1 | AT4G24240 | 58.824 | 85 | 29 | 2 | 163 | 242 | 256 | 339 | 1.58e-25 | 104 |
MS.gene49162.t1 | AT3G58710 | 58.537 | 82 | 26 | 1 | 184 | 257 | 70 | 151 | 1.59e-25 | 103 |
MS.gene49162.t1 | AT2G23320 | 52.381 | 84 | 36 | 1 | 163 | 242 | 215 | 298 | 5.63e-25 | 102 |
MS.gene49162.t1 | AT5G28650 | 67.797 | 59 | 19 | 0 | 185 | 243 | 263 | 321 | 9.22e-24 | 99.8 |
MS.gene49162.t1 | AT5G45260 | 49.505 | 101 | 47 | 3 | 161 | 258 | 1185 | 1284 | 1.24e-23 | 102 |
MS.gene49162.t1 | AT3G04670 | 67.797 | 59 | 19 | 0 | 185 | 243 | 263 | 321 | 1.79e-23 | 99.0 |
MS.gene49162.t1 | AT2G24570 | 51.220 | 82 | 38 | 1 | 162 | 241 | 219 | 300 | 3.04e-22 | 95.1 |
MS.gene49162.t1 | AT4G31550 | 50.000 | 82 | 39 | 1 | 162 | 241 | 222 | 303 | 4.29e-22 | 94.7 |
MS.gene49162.t1 | AT4G31550 | 48.780 | 82 | 40 | 1 | 162 | 241 | 221 | 302 | 1.42e-21 | 93.6 |
MS.gene49162.t1 | AT2G30590 | 51.250 | 80 | 38 | 1 | 164 | 243 | 294 | 372 | 1.57e-20 | 91.3 |
MS.gene49162.t1 | AT4G30935 | 36.364 | 132 | 79 | 3 | 168 | 295 | 314 | 444 | 2.76e-18 | 85.5 |
MS.gene49162.t1 | AT2G04880 | 44.565 | 92 | 44 | 3 | 165 | 250 | 287 | 377 | 8.71e-18 | 84.0 |
MS.gene49162.t1 | AT2G04880 | 44.565 | 92 | 44 | 3 | 165 | 250 | 263 | 353 | 9.57e-18 | 84.0 |
MS.gene49162.t1 | AT4G26440 | 43.158 | 95 | 49 | 3 | 166 | 256 | 353 | 446 | 1.01e-16 | 80.9 |
MS.gene49162.t1 | AT4G26440 | 34.286 | 140 | 74 | 5 | 118 | 256 | 127 | 249 | 4.45e-15 | 75.9 |
MS.gene49162.t1 | AT3G01080 | 53.125 | 64 | 29 | 1 | 181 | 244 | 341 | 403 | 1.69e-16 | 80.1 |
MS.gene49162.t1 | AT3G01080 | 42.308 | 78 | 43 | 2 | 180 | 257 | 201 | 276 | 8.37e-14 | 72.0 |
MS.gene49162.t1 | AT3G01080 | 53.125 | 64 | 29 | 1 | 181 | 244 | 303 | 365 | 1.78e-16 | 79.7 |
MS.gene49162.t1 | AT3G01080 | 42.308 | 78 | 43 | 2 | 180 | 257 | 163 | 238 | 9.22e-14 | 71.6 |
MS.gene49162.t1 | AT5G56270 | 43.373 | 83 | 45 | 2 | 166 | 247 | 468 | 549 | 4.05e-16 | 79.3 |
MS.gene49162.t1 | AT5G56270 | 48.333 | 60 | 29 | 2 | 185 | 244 | 274 | 331 | 3.85e-12 | 67.4 |
MS.gene49162.t1 | AT4G04450 | 39.326 | 89 | 54 | 0 | 182 | 270 | 196 | 284 | 5.10e-16 | 78.6 |
MS.gene49162.t1 | AT1G13960 | 41.176 | 85 | 48 | 2 | 161 | 244 | 385 | 468 | 6.18e-16 | 78.6 |
MS.gene49162.t1 | AT1G13960 | 34.862 | 109 | 60 | 4 | 141 | 244 | 185 | 287 | 7.40e-13 | 69.3 |
MS.gene49162.t1 | AT2G38470 | 39.091 | 110 | 62 | 3 | 172 | 277 | 349 | 457 | 8.62e-16 | 78.2 |
MS.gene49162.t1 | AT2G38470 | 36.290 | 124 | 68 | 4 | 185 | 302 | 185 | 303 | 6.79e-13 | 69.3 |
MS.gene49162.t1 | AT4G04450 | 39.326 | 89 | 54 | 0 | 182 | 270 | 290 | 378 | 9.23e-16 | 78.2 |
MS.gene49162.t1 | AT1G13960 | 44.595 | 74 | 39 | 2 | 172 | 244 | 243 | 315 | 9.26e-16 | 77.4 |
MS.gene49162.t1 | AT1G13960 | 34.862 | 109 | 60 | 4 | 141 | 244 | 32 | 134 | 2.05e-12 | 67.4 |
MS.gene49162.t1 | AT1G69310 | 43.333 | 90 | 43 | 3 | 158 | 241 | 116 | 203 | 1.01e-15 | 76.3 |
MS.gene49162.t1 | AT1G69310 | 43.333 | 90 | 43 | 3 | 158 | 241 | 116 | 203 | 1.01e-15 | 76.3 |
MS.gene49162.t1 | AT1G69310 | 43.333 | 90 | 43 | 3 | 158 | 241 | 116 | 203 | 1.01e-15 | 76.3 |
MS.gene49162.t1 | AT2G03340 | 43.038 | 79 | 43 | 2 | 172 | 249 | 402 | 479 | 1.36e-15 | 77.4 |
MS.gene49162.t1 | AT2G03340 | 42.308 | 78 | 43 | 2 | 179 | 256 | 245 | 320 | 4.11e-13 | 70.1 |
MS.gene49162.t1 | AT3G62340 | 35.115 | 131 | 80 | 3 | 163 | 289 | 95 | 224 | 1.93e-15 | 75.5 |
MS.gene49162.t1 | AT5G07100 | 39.796 | 98 | 53 | 3 | 164 | 256 | 213 | 309 | 2.25e-15 | 75.9 |
MS.gene49162.t1 | AT5G07100 | 41.176 | 68 | 39 | 1 | 177 | 244 | 110 | 176 | 1.52e-12 | 67.4 |
MS.gene49162.t1 | AT4G22070 | 49.206 | 63 | 32 | 0 | 182 | 244 | 295 | 357 | 2.78e-15 | 76.6 |
MS.gene49162.t1 | AT4G22070 | 49.206 | 63 | 32 | 0 | 182 | 244 | 295 | 357 | 2.78e-15 | 76.6 |
MS.gene49162.t1 | AT4G22070 | 49.206 | 63 | 32 | 0 | 182 | 244 | 295 | 357 | 2.78e-15 | 76.6 |
MS.gene49162.t1 | AT4G22070 | 49.206 | 63 | 32 | 0 | 182 | 244 | 295 | 357 | 2.78e-15 | 76.6 |
MS.gene49162.t1 | AT5G07100 | 39.796 | 98 | 53 | 3 | 164 | 256 | 120 | 216 | 3.40e-15 | 73.6 |
MS.gene49162.t1 | AT5G07100 | 41.176 | 68 | 39 | 1 | 177 | 244 | 17 | 83 | 9.84e-13 | 66.6 |
MS.gene49162.t1 | AT5G07100 | 39.796 | 98 | 53 | 3 | 164 | 256 | 120 | 216 | 3.40e-15 | 73.6 |
MS.gene49162.t1 | AT5G07100 | 41.176 | 68 | 39 | 1 | 177 | 244 | 17 | 83 | 9.84e-13 | 66.6 |
MS.gene49162.t1 | AT5G07100 | 39.796 | 98 | 53 | 3 | 164 | 256 | 120 | 216 | 3.40e-15 | 73.6 |
MS.gene49162.t1 | AT5G07100 | 41.176 | 68 | 39 | 1 | 177 | 244 | 17 | 83 | 9.84e-13 | 66.6 |
MS.gene49162.t1 | AT5G07100 | 39.796 | 98 | 53 | 3 | 164 | 256 | 120 | 216 | 3.40e-15 | 73.6 |
MS.gene49162.t1 | AT5G07100 | 41.176 | 68 | 39 | 1 | 177 | 244 | 17 | 83 | 9.84e-13 | 66.6 |
MS.gene49162.t1 | AT2G21900 | 40.449 | 89 | 45 | 2 | 164 | 245 | 82 | 169 | 3.68e-15 | 73.2 |
MS.gene49162.t1 | AT4G01720 | 53.333 | 60 | 28 | 0 | 185 | 244 | 240 | 299 | 3.78e-15 | 76.3 |
MS.gene49162.t1 | AT1G68150 | 48.000 | 75 | 38 | 1 | 185 | 259 | 236 | 309 | 3.91e-15 | 75.5 |
MS.gene49162.t1 | AT1G29860 | 43.590 | 78 | 40 | 2 | 185 | 262 | 137 | 210 | 4.00e-15 | 74.7 |
MS.gene49162.t1 | AT2G40740 | 41.667 | 120 | 53 | 5 | 160 | 269 | 143 | 255 | 4.42e-15 | 74.7 |
MS.gene49162.t1 | AT2G40740 | 41.667 | 120 | 53 | 5 | 160 | 269 | 152 | 264 | 4.71e-15 | 74.7 |
MS.gene49162.t1 | AT1G62300 | 49.206 | 63 | 32 | 0 | 182 | 244 | 310 | 372 | 5.07e-15 | 75.9 |
MS.gene49162.t1 | AT5G26170 | 51.724 | 58 | 27 | 1 | 185 | 242 | 114 | 170 | 5.96e-15 | 72.0 |
MS.gene49162.t1 | AT2G37260 | 45.882 | 85 | 39 | 3 | 162 | 241 | 323 | 405 | 6.30e-15 | 75.1 |
MS.gene49162.t1 | AT2G37260 | 41.935 | 93 | 52 | 2 | 178 | 270 | 159 | 249 | 1.36e-14 | 74.3 |
MS.gene49162.t1 | AT5G46350 | 47.297 | 74 | 38 | 1 | 185 | 258 | 184 | 256 | 6.87e-15 | 74.3 |
MS.gene49162.t1 | AT2G37260 | 45.882 | 85 | 39 | 3 | 162 | 241 | 243 | 325 | 8.04e-15 | 74.3 |
MS.gene49162.t1 | AT2G37260 | 41.935 | 93 | 52 | 2 | 178 | 270 | 79 | 169 | 1.47e-14 | 73.6 |
MS.gene49162.t1 | AT2G37260 | 45.882 | 85 | 39 | 3 | 162 | 241 | 241 | 323 | 8.32e-15 | 74.3 |
MS.gene49162.t1 | AT2G37260 | 41.935 | 93 | 52 | 2 | 178 | 270 | 77 | 167 | 1.53e-14 | 73.6 |
MS.gene49162.t1 | AT5G15130 | 45.714 | 70 | 38 | 0 | 185 | 254 | 228 | 297 | 1.01e-14 | 75.1 |
MS.gene49162.t1 | AT5G15130 | 45.714 | 70 | 38 | 0 | 185 | 254 | 186 | 255 | 1.06e-14 | 74.7 |
MS.gene49162.t1 | AT5G49520 | 50.769 | 65 | 30 | 2 | 180 | 244 | 218 | 280 | 1.21e-14 | 74.3 |
MS.gene49162.t1 | AT4G18170 | 51.613 | 62 | 29 | 1 | 185 | 246 | 173 | 233 | 1.23e-14 | 73.6 |
MS.gene49162.t1 | AT5G43290 | 39.560 | 91 | 54 | 1 | 151 | 241 | 81 | 170 | 1.32e-14 | 73.2 |
MS.gene49162.t1 | AT3G01080 | 42.308 | 78 | 43 | 2 | 180 | 257 | 201 | 276 | 4.53e-14 | 72.0 |
MS.gene49162.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 338 | 405 | 5.78e-14 | 72.8 |
MS.gene49162.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 378 | 445 | 7.09e-14 | 72.4 |
MS.gene49162.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 306 | 373 | 7.41e-14 | 72.4 |
MS.gene49162.t1 | AT4G23810 | 35.115 | 131 | 65 | 5 | 185 | 310 | 159 | 274 | 7.51e-14 | 71.6 |
MS.gene49162.t1 | AT1G69810 | 47.887 | 71 | 36 | 1 | 185 | 254 | 204 | 274 | 7.87e-14 | 72.0 |
MS.gene49162.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 202 | 269 | 8.67e-14 | 71.6 |
MS.gene49162.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 202 | 269 | 8.67e-14 | 71.6 |
MS.gene49162.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 202 | 269 | 8.67e-14 | 71.6 |
MS.gene49162.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 202 | 269 | 8.67e-14 | 71.6 |
MS.gene49162.t1 | AT1G80840 | 39.437 | 71 | 43 | 0 | 185 | 255 | 147 | 217 | 1.04e-13 | 70.9 |
MS.gene49162.t1 | AT1G69810 | 47.887 | 71 | 36 | 1 | 185 | 254 | 146 | 216 | 1.05e-13 | 71.2 |
MS.gene49162.t1 | AT2G30250 | 44.000 | 75 | 40 | 2 | 172 | 245 | 315 | 388 | 1.11e-13 | 71.2 |
MS.gene49162.t1 | AT2G25000 | 46.667 | 60 | 32 | 0 | 185 | 244 | 104 | 163 | 2.18e-13 | 68.9 |
MS.gene49162.t1 | AT2G25000 | 46.667 | 60 | 32 | 0 | 185 | 244 | 104 | 163 | 2.18e-13 | 68.9 |
MS.gene49162.t1 | AT1G18860 | 50.000 | 60 | 30 | 0 | 185 | 244 | 240 | 299 | 2.62e-13 | 70.5 |
MS.gene49162.t1 | AT2G44745 | 41.026 | 78 | 44 | 2 | 165 | 241 | 125 | 201 | 3.12e-13 | 68.2 |
MS.gene49162.t1 | AT2G25000 | 46.667 | 60 | 32 | 0 | 185 | 244 | 126 | 185 | 3.42e-13 | 68.6 |
MS.gene49162.t1 | AT4G31800 | 41.558 | 77 | 45 | 0 | 185 | 261 | 112 | 188 | 3.98e-13 | 68.6 |
MS.gene49162.t1 | AT5G64810 | 49.123 | 57 | 28 | 1 | 185 | 241 | 111 | 166 | 4.43e-13 | 67.4 |
MS.gene49162.t1 | AT2G40750 | 34.426 | 122 | 65 | 5 | 183 | 290 | 151 | 271 | 4.49e-13 | 69.3 |
MS.gene49162.t1 | AT1G55600 | 37.500 | 80 | 48 | 2 | 166 | 244 | 288 | 366 | 4.49e-13 | 69.7 |
MS.gene49162.t1 | AT2G25000 | 46.667 | 60 | 32 | 0 | 185 | 244 | 147 | 206 | 5.28e-13 | 68.6 |
MS.gene49162.t1 | AT2G46130 | 49.206 | 63 | 30 | 2 | 179 | 241 | 26 | 86 | 5.99e-13 | 64.7 |
MS.gene49162.t1 | AT4G31800 | 41.558 | 77 | 45 | 0 | 185 | 261 | 177 | 253 | 6.08e-13 | 68.6 |
MS.gene49162.t1 | AT1G64000 | 45.161 | 62 | 33 | 1 | 180 | 241 | 110 | 170 | 7.97e-13 | 66.6 |
MS.gene49162.t1 | AT5G41570 | 39.744 | 78 | 45 | 2 | 165 | 241 | 78 | 154 | 8.36e-13 | 66.2 |
MS.gene49162.t1 | AT2G46400 | 33.333 | 117 | 72 | 3 | 129 | 239 | 45 | 161 | 8.57e-13 | 68.2 |
MS.gene49162.t1 | AT2G47260 | 42.683 | 82 | 42 | 3 | 166 | 244 | 154 | 233 | 1.09e-12 | 68.2 |
MS.gene49162.t1 | AT3G56400 | 41.026 | 78 | 39 | 3 | 164 | 239 | 105 | 177 | 1.49e-12 | 67.4 |
MS.gene49162.t1 | AT3G01970 | 43.548 | 62 | 34 | 1 | 181 | 242 | 62 | 122 | 2.19e-12 | 64.3 |
MS.gene49162.t1 | AT5G13080 | 42.623 | 61 | 34 | 1 | 181 | 241 | 64 | 123 | 2.43e-12 | 63.9 |
MS.gene49162.t1 | AT4G11070 | 50.877 | 57 | 26 | 1 | 185 | 239 | 110 | 166 | 3.99e-12 | 65.9 |
MS.gene49162.t1 | AT4G11070 | 50.877 | 57 | 26 | 1 | 185 | 239 | 142 | 198 | 4.12e-12 | 66.2 |
MS.gene49162.t1 | AT5G24110 | 39.024 | 82 | 48 | 1 | 160 | 239 | 89 | 170 | 4.72e-12 | 65.9 |
MS.gene49162.t1 | AT4G39410 | 42.667 | 75 | 42 | 1 | 185 | 259 | 224 | 297 | 9.10e-12 | 65.1 |
Find 79 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGATGTGGAGAACCTTTAA+TGG | 0.267330 | 1.3:+68656246 | None:intergenic |
TGCAATATGAGGAGGGGAAT+TGG | 0.276980 | 1.3:+68656728 | None:intergenic |
TCTTGAAGCTCATTGGTTAT+AGG | 0.277524 | 1.3:+68656819 | None:intergenic |
GTGTTTGAGGCTGGATGCTT+TGG | 0.300180 | 1.3:+68656535 | None:intergenic |
CTTTCGCGCGGTACAACCTT+TGG | 0.306785 | 1.3:+68656005 | None:intergenic |
TTGTGGGCATGGCGAAAATA+TGG | 0.311492 | 1.3:-68656277 | MS.gene49162:CDS |
TGTTTGAGGCTGGATGCTTT+GGG | 0.315208 | 1.3:+68656536 | None:intergenic |
GTTATAGGTTGCACTACATT+AGG | 0.317458 | 1.3:+68656834 | None:intergenic |
TCTTTAGCACCAAACTCTTT+TGG | 0.322210 | 1.3:-68655802 | MS.gene49162:CDS |
GCAATATGAGGAGGGGAATT+GGG | 0.331773 | 1.3:+68656729 | None:intergenic |
TCTTCTTCACCAAAAGAGTT+TGG | 0.338560 | 1.3:+68655793 | None:intergenic |
AAACACCTAGATCAAGAAAA+AGG | 0.350761 | 1.3:-68656518 | MS.gene49162:intron |
GGGTAAAAGATGTCAATAAT+TGG | 0.354816 | 1.3:+68656790 | None:intergenic |
TATAACAATGGCTGAGGATT+GGG | 0.363678 | 1.3:-68657000 | None:intergenic |
TCTGTTGTTGTTGTAATTGT+TGG | 0.364018 | 1.3:+68656598 | None:intergenic |
TTGATCTAGGTGTTTGAGGC+TGG | 0.368009 | 1.3:+68656526 | None:intergenic |
TGATTGGCAGCTTCGAACTA+TGG | 0.377700 | 1.3:+68656968 | None:intergenic |
TTTGAAATTAGAAGAGGAAA+TGG | 0.378100 | 1.3:+68656887 | None:intergenic |
ATGAAGTGGTAGGGACAAAA+TGG | 0.381815 | 1.3:+68656682 | None:intergenic |
TTTCTTGATCTAGGTGTTTG+AGG | 0.387303 | 1.3:+68656522 | None:intergenic |
CTACCACTTCATCCTCCATT+TGG | 0.392272 | 1.3:-68656671 | MS.gene49162:CDS |
GTTGTTGTAATTGTTGGTTA+TGG | 0.398557 | 1.3:+68656604 | None:intergenic |
GTTTAGATCTTGAAGCTCAT+TGG | 0.407230 | 1.3:+68656812 | None:intergenic |
GGATGTGGAGAACCTTTAAT+GGG | 0.413222 | 1.3:+68656247 | None:intergenic |
TTCTGTTGTGGATGTATTGG+TGG | 0.430239 | 1.3:+68656944 | None:intergenic |
TGGATGTATTGGTGGCTGAT+TGG | 0.440667 | 1.3:+68656952 | None:intergenic |
ATGTTCACTGTGACATATAC+AGG | 0.458166 | 1.3:-68655952 | MS.gene49162:CDS |
TTATAACAATGGCTGAGGAT+TGG | 0.466049 | 1.3:-68657001 | None:intergenic |
CAAGAAGAAGTTGAGCTGTT+GGG | 0.466337 | 1.3:+68655829 | None:intergenic |
TTGCACAAAATGAGGCCAAA+TGG | 0.470578 | 1.3:+68656656 | None:intergenic |
CTAGTGGTAGTGGTGATGGT+GGG | 0.471993 | 1.3:+68656768 | None:intergenic |
CGGATGTGTCACCGGAGACT+TGG | 0.472713 | 1.3:+68655873 | None:intergenic |
AGACTTGGTTCGTGTACTTC+CGG | 0.473267 | 1.3:+68655888 | None:intergenic |
GCAAGAAGAAGTTGAGCTGT+TGG | 0.473676 | 1.3:+68655828 | None:intergenic |
GAAGTTTCTTGCACAAAATG+AGG | 0.474186 | 1.3:+68656648 | None:intergenic |
TGCATTTATAACAATGGCTG+AGG | 0.489485 | 1.3:-68657006 | None:intergenic |
AGAGGTTATCTGCGGTTACA+TGG | 0.495635 | 1.3:+68656308 | None:intergenic |
TAACCTCTCAACAGATTTGT+GGG | 0.500103 | 1.3:-68656293 | MS.gene49162:CDS |
AAAAGAGTTTGGTGCTAAAG+AGG | 0.510944 | 1.3:+68655804 | None:intergenic |
TTCTACTTTGAAATTAGAAG+AGG | 0.512786 | 1.3:+68656881 | None:intergenic |
TTCCGGCTAGCGAGTTCCGA+TGG | 0.517215 | 1.3:+68655905 | None:intergenic |
TAGTGGTAGTGGTGATGGTG+GGG | 0.518969 | 1.3:+68656769 | None:intergenic |
ACTAGTGGTAGTGGTGATGG+TGG | 0.527538 | 1.3:+68656767 | None:intergenic |
TCCCTTGGTCATGTTTAGGA+AGG | 0.527622 | 1.3:+68655712 | None:intergenic |
TTATATCTGTACCTTGGATG+TGG | 0.528855 | 1.3:+68656232 | None:intergenic |
ATAACCTCTCAACAGATTTG+TGG | 0.535451 | 1.3:-68656294 | MS.gene49162:CDS |
ACCCATCGGAACTCGCTAGC+CGG | 0.537516 | 1.3:-68655907 | MS.gene49162:CDS |
TCCGATGGGTAGGTCTTGCA+TGG | 0.545684 | 1.3:+68655920 | None:intergenic |
AGTGGTAGTGGTGATGGTGG+GGG | 0.547011 | 1.3:+68656770 | None:intergenic |
CCTCATATTGCAAAATACAT+TGG | 0.547832 | 1.3:-68656717 | MS.gene49162:CDS |
TTAGAAGAGGAAATGGAAGA+TGG | 0.555768 | 1.3:+68656894 | None:intergenic |
GAGGTGGTCGGATGTGTCAC+CGG | 0.563562 | 1.3:+68655865 | None:intergenic |
GTTTGAGGCTGGATGCTTTG+GGG | 0.566369 | 1.3:+68656537 | None:intergenic |
TGACTAGAAATTGAGGTGGT+CGG | 0.577828 | 1.3:+68655853 | None:intergenic |
GAATATGTTGAAGCTAGAAG+TGG | 0.578885 | 1.3:+68656626 | None:intergenic |
TCCGGCTAGCGAGTTCCGAT+GGG | 0.583330 | 1.3:+68655906 | None:intergenic |
AAATGGAGGATGAAGTGGTA+GGG | 0.588890 | 1.3:+68656673 | None:intergenic |
TCTCAACAGATTTGTGGGCA+TGG | 0.588913 | 1.3:-68656288 | MS.gene49162:CDS |
AGGCCAAATGGAGGATGAAG+TGG | 0.588915 | 1.3:+68656668 | None:intergenic |
GAAATTGAAACTGATGATGA+TGG | 0.590055 | 1.3:-68655754 | MS.gene49162:CDS |
CACAAAATGAGGCCAAATGG+AGG | 0.593875 | 1.3:+68656659 | None:intergenic |
ACCACTAGTGGTAGTGGTGA+TGG | 0.595167 | 1.3:+68656764 | None:intergenic |
GTTGGGTTGACTAGAAATTG+AGG | 0.607818 | 1.3:+68655846 | None:intergenic |
ACCATCACCACTACCACTAG+TGG | 0.613945 | 1.3:-68656765 | MS.gene49162:CDS |
AAGTACACGAACCAAGTCTC+CGG | 0.613947 | 1.3:-68655884 | MS.gene49162:CDS |
TTAAAGGTTCTCCACATCCA+AGG | 0.614226 | 1.3:-68656243 | MS.gene49162:intron |
CAAATGGAGGATGAAGTGGT+AGG | 0.614699 | 1.3:+68656672 | None:intergenic |
TATAGATGTAGCAGTTCCAA+AGG | 0.623205 | 1.3:-68656021 | MS.gene49162:CDS |
CCTTTCAACTTGCTTTCGCG+CGG | 0.627775 | 1.3:+68655993 | None:intergenic |
ATCTGTTGAGAGGTTATCTG+CGG | 0.627787 | 1.3:+68656300 | None:intergenic |
GCTAGCGAGTTCCGATGGGT+AGG | 0.628478 | 1.3:+68655910 | None:intergenic |
CCGCGCGAAAGCAAGTTGAA+AGG | 0.629161 | 1.3:-68655993 | MS.gene49162:CDS |
ACTATGACCACTAGTGGTAG+TGG | 0.630261 | 1.3:+68656758 | None:intergenic |
AGAAGAAGAGGACATCGACA+TGG | 0.634163 | 1.3:-68655776 | MS.gene49162:CDS |
ATGCCCACAAATCTGTTGAG+AGG | 0.641173 | 1.3:+68656290 | None:intergenic |
ATTGATACTATGACCACTAG+TGG | 0.649685 | 1.3:+68656752 | None:intergenic |
ACCATGCAAGACCTACCCAT+CGG | 0.674071 | 1.3:-68655921 | MS.gene49162:CDS |
AGATGGTATAGTATTTGTTG+TGG | 0.678604 | 1.3:+68656911 | None:intergenic |
GGGTTGACTAGAAATTGAGG+TGG | 0.732424 | 1.3:+68655849 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACTCTAATAAAAATTAATT+TGG | - | chr1.3:68656508-68656527 | MS.gene49162:intron | 10.0% |
!!! | AATCAATGTTTTAAAATTTT+TGG | + | chr1.3:68656578-68656597 | None:intergenic | 10.0% |
!!! | CACTTTTTTGTTGTATTATT+AGG | - | chr1.3:68656669-68656688 | MS.gene49162:CDS | 20.0% |
!!! | TAATACAACAAAAAAGTGTA+AGG | + | chr1.3:68656667-68656686 | None:intergenic | 20.0% |
! | ATGTACTATTATTTATGCCA+TGG | + | chr1.3:68656311-68656330 | None:intergenic | 25.0% |
!! | TTTGAAATTAGAAGAGGAAA+TGG | + | chr1.3:68655835-68655854 | None:intergenic | 25.0% |
!! | TTTTCTGTTGAATAGGAAAA+AGG | + | chr1.3:68656368-68656387 | None:intergenic | 25.0% |
!!! | TTCTACTTTGAAATTAGAAG+AGG | + | chr1.3:68655841-68655860 | None:intergenic | 25.0% |
AAAAAGTCAACAAGGGAAAA+TGG | - | chr1.3:68656384-68656403 | MS.gene49162:intron | 30.0% | |
AAACACCTAGATCAAGAAAA+AGG | - | chr1.3:68656201-68656220 | MS.gene49162:intron | 30.0% | |
AGTATTTCCTGAGAAATTGA+TGG | + | chr1.3:68656639-68656658 | None:intergenic | 30.0% | |
CCTCATATTGCAAAATACAT+TGG | - | chr1.3:68656002-68656021 | MS.gene49162:CDS | 30.0% | |
GGGTAAAAGATGTCAATAAT+TGG | + | chr1.3:68655932-68655951 | None:intergenic | 30.0% | |
TACTATTATTTATGCCATGG+TGG | + | chr1.3:68656308-68656327 | None:intergenic | 30.0% | |
TATGGACAAAAACCCATTAA+AGG | - | chr1.3:68656460-68656479 | MS.gene49162:intron | 30.0% | |
TATTGAACCATCAATTTCTC+AGG | - | chr1.3:68656629-68656648 | MS.gene49162:CDS | 30.0% | |
TCAACAGAAAAAGTCAACAA+GGG | - | chr1.3:68656377-68656396 | MS.gene49162:intron | 30.0% | |
TTAGAGTTATATCTGTACCT+TGG | + | chr1.3:68656496-68656515 | None:intergenic | 30.0% | |
TTCAACAGAAAAAGTCAACA+AGG | - | chr1.3:68656376-68656395 | MS.gene49162:intron | 30.0% | |
! | AGATGGTATAGTATTTGTTG+TGG | + | chr1.3:68655811-68655830 | None:intergenic | 30.0% |
! | ATGTATTTTGCAATATGAGG+AGG | + | chr1.3:68656002-68656021 | None:intergenic | 30.0% |
! | ATTTTCTGTTGTGGATGTAT+TGG | + | chr1.3:68655781-68655800 | None:intergenic | 30.0% |
! | CCAATGTATTTTGCAATATG+AGG | + | chr1.3:68656005-68656024 | None:intergenic | 30.0% |
! | GAAATTGAAACTGATGATGA+TGG | - | chr1.3:68656965-68656984 | MS.gene49162:CDS | 30.0% |
! | GGTAAATGAATTTTCTGTTG+TGG | + | chr1.3:68655790-68655809 | None:intergenic | 30.0% |
! | GTTGTTGTAATTGTTGGTTA+TGG | + | chr1.3:68656118-68656137 | None:intergenic | 30.0% |
! | TACTACCTTTTTCTTGATCT+AGG | + | chr1.3:68656209-68656228 | None:intergenic | 30.0% |
! | TCTGTTGTTGTTGTAATTGT+TGG | + | chr1.3:68656124-68656143 | None:intergenic | 30.0% |
! | TGTATTTTGCAATATGAGGA+GGG | + | chr1.3:68656001-68656020 | None:intergenic | 30.0% |
!! | GTTGACTTTTTCTGTTGAAT+AGG | + | chr1.3:68656375-68656394 | None:intergenic | 30.0% |
ATAACCTCTCAACAGATTTG+TGG | - | chr1.3:68656425-68656444 | MS.gene49162:intron | 35.0% | |
ATGTTCACTGTGACATATAC+AGG | - | chr1.3:68656767-68656786 | MS.gene49162:CDS | 35.0% | |
ATTGATACTATGACCACTAG+TGG | + | chr1.3:68655970-68655989 | None:intergenic | 35.0% | |
GAAGTTTCTTGCACAAAATG+AGG | + | chr1.3:68656074-68656093 | None:intergenic | 35.0% | |
GAATATGTTGAAGCTAGAAG+TGG | + | chr1.3:68656096-68656115 | None:intergenic | 35.0% | |
GTTATAGGTTGCACTACATT+AGG | + | chr1.3:68655888-68655907 | None:intergenic | 35.0% | |
GTTTAGATCTTGAAGCTCAT+TGG | + | chr1.3:68655910-68655929 | None:intergenic | 35.0% | |
TAACCTCTCAACAGATTTGT+GGG | - | chr1.3:68656426-68656445 | MS.gene49162:intron | 35.0% | |
TATAGATGTAGCAGTTCCAA+AGG | - | chr1.3:68656698-68656717 | MS.gene49162:CDS | 35.0% | |
TCTTCTTCACCAAAAGAGTT+TGG | + | chr1.3:68656929-68656948 | None:intergenic | 35.0% | |
TTACATACATAAAGCCACCA+TGG | - | chr1.3:68656291-68656310 | MS.gene49162:CDS | 35.0% | |
TTAGAAGAGGAAATGGAAGA+TGG | + | chr1.3:68655828-68655847 | None:intergenic | 35.0% | |
TTATATCTGTACCTTGGATG+TGG | + | chr1.3:68656490-68656509 | None:intergenic | 35.0% | |
TTTCTTGATCTAGGTGTTTG+AGG | + | chr1.3:68656200-68656219 | None:intergenic | 35.0% | |
! | GTATTTTGCAATATGAGGAG+GGG | + | chr1.3:68656000-68656019 | None:intergenic | 35.0% |
! | TCTTGAAGCTCATTGGTTAT+AGG | + | chr1.3:68655903-68655922 | None:intergenic | 35.0% |
! | TCTTTAGCACCAAACTCTTT+TGG | - | chr1.3:68656917-68656936 | MS.gene49162:CDS | 35.0% |
!! | AAAAGAGTTTGGTGCTAAAG+AGG | + | chr1.3:68656918-68656937 | None:intergenic | 35.0% |
AAATGGAGGATGAAGTGGTA+GGG | + | chr1.3:68656049-68656068 | None:intergenic | 40.0% | |
ATCTGTTGAGAGGTTATCTG+CGG | + | chr1.3:68656422-68656441 | None:intergenic | 40.0% | |
ATGAAGTGGTAGGGACAAAA+TGG | + | chr1.3:68656040-68656059 | None:intergenic | 40.0% | |
CAAGAAGAAGTTGAGCTGTT+GGG | + | chr1.3:68656893-68656912 | None:intergenic | 40.0% | |
GGATGTGGAGAACCTTTAAT+GGG | + | chr1.3:68656475-68656494 | None:intergenic | 40.0% | |
TGACTAGAAATTGAGGTGGT+CGG | + | chr1.3:68656869-68656888 | None:intergenic | 40.0% | |
TGGATGTGGAGAACCTTTAA+TGG | + | chr1.3:68656476-68656495 | None:intergenic | 40.0% | |
TTAAAGGTTCTCCACATCCA+AGG | - | chr1.3:68656476-68656495 | MS.gene49162:intron | 40.0% | |
TTCTGTTGTGGATGTATTGG+TGG | + | chr1.3:68655778-68655797 | None:intergenic | 40.0% | |
TTGCACAAAATGAGGCCAAA+TGG | + | chr1.3:68656066-68656085 | None:intergenic | 40.0% | |
! | CTCTTTTGGTGAAGAAGAAG+AGG | - | chr1.3:68656931-68656950 | MS.gene49162:CDS | 40.0% |
!! | GTTGGGTTGACTAGAAATTG+AGG | + | chr1.3:68656876-68656895 | None:intergenic | 40.0% |
AAGTACACGAACCAAGTCTC+CGG | - | chr1.3:68656835-68656854 | MS.gene49162:CDS | 45.0% | |
ACTATGACCACTAGTGGTAG+TGG | + | chr1.3:68655964-68655983 | None:intergenic | 45.0% | |
AGAAGAAGAGGACATCGACA+TGG | - | chr1.3:68656943-68656962 | MS.gene49162:CDS | 45.0% | |
AGAGGTTATCTGCGGTTACA+TGG | + | chr1.3:68656414-68656433 | None:intergenic | 45.0% | |
ATGCCCACAAATCTGTTGAG+AGG | + | chr1.3:68656432-68656451 | None:intergenic | 45.0% | |
CAAATGGAGGATGAAGTGGT+AGG | + | chr1.3:68656050-68656069 | None:intergenic | 45.0% | |
CACAAAATGAGGCCAAATGG+AGG | + | chr1.3:68656063-68656082 | None:intergenic | 45.0% | |
CTACCACTTCATCCTCCATT+TGG | - | chr1.3:68656048-68656067 | MS.gene49162:intron | 45.0% | |
GCAAGAAGAAGTTGAGCTGT+TGG | + | chr1.3:68656894-68656913 | None:intergenic | 45.0% | |
GCAATATGAGGAGGGGAATT+GGG | + | chr1.3:68655993-68656012 | None:intergenic | 45.0% | |
GGGTTGACTAGAAATTGAGG+TGG | + | chr1.3:68656873-68656892 | None:intergenic | 45.0% | |
TCTCAACAGATTTGTGGGCA+TGG | - | chr1.3:68656431-68656450 | MS.gene49162:intron | 45.0% | |
TGATTGGCAGCTTCGAACTA+TGG | + | chr1.3:68655754-68655773 | None:intergenic | 45.0% | |
TGCAATATGAGGAGGGGAAT+TGG | + | chr1.3:68655994-68656013 | None:intergenic | 45.0% | |
TTGTGGGCATGGCGAAAATA+TGG | - | chr1.3:68656442-68656461 | MS.gene49162:intron | 45.0% | |
! | AGACTTGGTTCGTGTACTTC+CGG | + | chr1.3:68656834-68656853 | None:intergenic | 45.0% |
! | TGGATGTATTGGTGGCTGAT+TGG | + | chr1.3:68655770-68655789 | None:intergenic | 45.0% |
! | TGTTTGAGGCTGGATGCTTT+GGG | + | chr1.3:68656186-68656205 | None:intergenic | 45.0% |
! | TTGATCTAGGTGTTTGAGGC+TGG | + | chr1.3:68656196-68656215 | None:intergenic | 45.0% |
ACCATCACCACTACCACTAG+TGG | - | chr1.3:68655954-68655973 | MS.gene49162:CDS | 50.0% | |
ACCATGCAAGACCTACCCAT+CGG | - | chr1.3:68656798-68656817 | MS.gene49162:CDS | 50.0% | |
AGGCCAAATGGAGGATGAAG+TGG | + | chr1.3:68656054-68656073 | None:intergenic | 50.0% | |
! | CCTTTCAACTTGCTTTCGCG+CGG | + | chr1.3:68656729-68656748 | None:intergenic | 50.0% |
! | GTGTTTGAGGCTGGATGCTT+TGG | + | chr1.3:68656187-68656206 | None:intergenic | 50.0% |
! | GTTTGAGGCTGGATGCTTTG+GGG | + | chr1.3:68656185-68656204 | None:intergenic | 50.0% |
!! | ACCACTAGTGGTAGTGGTGA+TGG | + | chr1.3:68655958-68655977 | None:intergenic | 50.0% |
!! | ACTAGTGGTAGTGGTGATGG+TGG | + | chr1.3:68655955-68655974 | None:intergenic | 50.0% |
!! | CTAGTGGTAGTGGTGATGGT+GGG | + | chr1.3:68655954-68655973 | None:intergenic | 50.0% |
!! | TAGTGGTAGTGGTGATGGTG+GGG | + | chr1.3:68655953-68655972 | None:intergenic | 50.0% |
CTTTCGCGCGGTACAACCTT+TGG | + | chr1.3:68656717-68656736 | None:intergenic | 55.0% | |
TCCGATGGGTAGGTCTTGCA+TGG | + | chr1.3:68656802-68656821 | None:intergenic | 55.0% | |
! | CCGCGCGAAAGCAAGTTGAA+AGG | - | chr1.3:68656726-68656745 | MS.gene49162:CDS | 55.0% |
!! | AGTGGTAGTGGTGATGGTGG+GGG | + | chr1.3:68655952-68655971 | None:intergenic | 55.0% |
ACCCATCGGAACTCGCTAGC+CGG | - | chr1.3:68656812-68656831 | MS.gene49162:CDS | 60.0% | |
CGGATGTGTCACCGGAGACT+TGG | + | chr1.3:68656849-68656868 | None:intergenic | 60.0% | |
GAGGTGGTCGGATGTGTCAC+CGG | + | chr1.3:68656857-68656876 | None:intergenic | 60.0% | |
GCTAGCGAGTTCCGATGGGT+AGG | + | chr1.3:68656812-68656831 | None:intergenic | 60.0% | |
TCCGGCTAGCGAGTTCCGAT+GGG | + | chr1.3:68656816-68656835 | None:intergenic | 60.0% | |
TTCCGGCTAGCGAGTTCCGA+TGG | + | chr1.3:68656817-68656836 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 68655726 | 68657015 | 68655726 | ID=MS.gene49162 |
chr1.3 | mRNA | 68655726 | 68657015 | 68655726 | ID=MS.gene49162.t1;Parent=MS.gene49162 |
chr1.3 | exon | 68656519 | 68657015 | 68656519 | ID=MS.gene49162.t1.exon1;Parent=MS.gene49162.t1 |
chr1.3 | CDS | 68656519 | 68657015 | 68656519 | ID=cds.MS.gene49162.t1;Parent=MS.gene49162.t1 |
chr1.3 | exon | 68656244 | 68656357 | 68656244 | ID=MS.gene49162.t1.exon2;Parent=MS.gene49162.t1 |
chr1.3 | CDS | 68656244 | 68656357 | 68656244 | ID=cds.MS.gene49162.t1;Parent=MS.gene49162.t1 |
chr1.3 | exon | 68655726 | 68656050 | 68655726 | ID=MS.gene49162.t1.exon3;Parent=MS.gene49162.t1 |
chr1.3 | CDS | 68655726 | 68656050 | 68655726 | ID=cds.MS.gene49162.t1;Parent=MS.gene49162.t1 |
Gene Sequence |
Protein sequence |