AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49375

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49375.t1 MTR_1g071370 97.199 1071 30 0 1 1071 1 1071 0.0 2185
MS.gene49375.t1 MTR_1g015110 33.478 230 98 7 226 446 368 551 2.39e-23 106
MS.gene49375.t1 MTR_3g104710 32.589 224 96 6 226 440 364 541 3.15e-23 105
MS.gene49375.t1 MTR_4g125810 31.897 232 96 8 225 442 324 507 7.45e-22 101
MS.gene49375.t1 MTR_3g068200 32.301 226 90 6 226 438 200 375 2.21e-21 98.2
MS.gene49375.t1 MTR_1g014640 28.740 254 123 6 183 436 126 321 3.32e-21 96.7
MS.gene49375.t1 MTR_1g013400 28.740 254 123 6 183 436 126 321 3.32e-21 96.7
MS.gene49375.t1 MTR_3g105730 27.953 254 125 6 183 436 61 256 3.37e-21 95.5
MS.gene49375.t1 MTR_5g009370 32.432 222 97 5 226 440 157 332 4.00e-21 96.3
MS.gene49375.t1 MTR_3g105730 27.953 254 125 6 183 436 83 278 7.52e-21 94.7
MS.gene49375.t1 MTR_1g028300 39.735 151 81 6 300 444 240 386 5.01e-20 94.0
MS.gene49375.t1 MTR_2g040500 25.389 386 195 15 72 440 228 537 5.98e-19 92.4
MS.gene49375.t1 MTR_8g102550 30.415 217 103 5 226 440 220 390 1.84e-18 89.4
MS.gene49375.t1 MTR_1g115570 29.958 237 104 9 200 436 161 335 1.46e-16 82.8
MS.gene49375.t1 MTR_3g464650 25.100 251 130 7 198 441 118 317 1.55e-16 82.4
MS.gene49375.t1 MTR_6g081850 24.540 326 153 8 71 396 51 283 1.20e-15 79.7
MS.gene49375.t1 MTR_3g091060 27.642 246 120 6 200 445 160 347 2.57e-15 79.3
MS.gene49375.t1 MTR_3g105880 24.934 377 184 13 42 404 5 296 1.40e-14 76.6
MS.gene49375.t1 MTR_5g071550 22.193 374 162 10 71 441 130 377 1.05e-13 74.7
MS.gene49375.t1 MTR_3g464700 38.136 118 68 3 275 392 186 298 1.72e-13 73.6
MS.gene49375.t1 MTR_5g071550 23.547 327 133 8 71 397 130 339 6.28e-13 72.0
MS.gene49375.t1 MTR_2g078760 28.241 216 94 9 226 439 177 333 5.56e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49375.t1 AT3G63340 55.807 1059 407 15 24 1069 30 1040 0.0 1154
MS.gene49375.t1 AT3G63340 55.744 1062 402 17 24 1069 30 1039 0.0 1151
MS.gene49375.t1 AT3G63340 55.744 1062 402 17 24 1069 30 1039 0.0 1151
MS.gene49375.t1 AT3G63340 54.121 1092 407 16 24 1069 30 1073 0.0 1137
MS.gene49375.t1 AT3G63340 55.082 1033 396 17 24 1040 30 1010 0.0 1100
MS.gene49375.t1 AT3G63340 54.971 1026 394 17 24 1033 30 1003 0.0 1088
MS.gene49375.t1 AT3G63340 54.971 1026 394 17 24 1033 30 1003 0.0 1088
MS.gene49375.t1 AT3G63340 54.971 1026 394 17 24 1033 30 1003 0.0 1088
MS.gene49375.t1 AT3G63340 54.971 1026 394 17 24 1033 30 1003 0.0 1088
MS.gene49375.t1 AT3G63340 52.124 871 351 16 24 878 30 850 0.0 849
MS.gene49375.t1 AT3G63340 65.473 391 117 4 679 1069 2 374 4.27e-178 525
MS.gene49375.t1 AT3G63340 56.278 446 173 6 24 457 30 465 2.35e-163 493
MS.gene49375.t1 AT3G63320 57.265 351 126 4 90 440 56 382 2.53e-125 389
MS.gene49375.t1 AT3G63320 56.522 322 117 3 119 440 1 299 1.49e-112 353
MS.gene49375.t1 AT5G57050 32.296 257 113 8 200 442 166 375 2.65e-24 107
MS.gene49375.t1 AT5G57050 32.296 257 113 8 200 442 206 415 4.72e-24 107
MS.gene49375.t1 AT4G26080 30.888 259 115 8 196 439 214 423 2.54e-22 101
MS.gene49375.t1 AT1G72770 32.258 248 105 10 205 440 307 503 7.56e-22 101
MS.gene49375.t1 AT1G72770 32.258 248 105 10 205 440 307 503 7.56e-22 101
MS.gene49375.t1 AT1G72770 32.258 248 105 10 205 440 307 503 7.56e-22 101
MS.gene49375.t1 AT5G24940 31.381 239 102 8 200 436 99 277 7.74e-21 97.4
MS.gene49375.t1 AT4G31750 28.044 271 135 7 183 453 82 292 1.13e-20 94.4
MS.gene49375.t1 AT4G31750 28.044 271 135 7 183 453 82 292 1.92e-20 94.0
MS.gene49375.t1 AT4G31750 28.044 271 135 7 183 453 82 292 1.92e-20 94.0
MS.gene49375.t1 AT5G10740 29.958 237 108 6 200 436 99 277 3.76e-20 94.0
MS.gene49375.t1 AT5G10740 29.958 237 108 6 200 436 99 277 3.76e-20 94.0
MS.gene49375.t1 AT1G17550 31.278 227 95 8 226 440 326 503 8.01e-20 94.7
MS.gene49375.t1 AT1G17550 31.278 227 95 8 226 440 326 503 8.01e-20 94.7
MS.gene49375.t1 AT5G51760 33.043 230 94 6 225 440 200 383 8.44e-20 93.6
MS.gene49375.t1 AT5G51760 33.043 230 94 6 225 440 230 413 1.45e-19 93.2
MS.gene49375.t1 AT2G29380 32.883 222 89 7 226 438 190 360 1.73e-19 92.0
MS.gene49375.t1 AT5G59220 36.000 175 62 6 226 400 221 345 3.54e-19 92.0
MS.gene49375.t1 AT1G43900 28.333 240 113 6 200 439 189 369 9.11e-19 90.1
MS.gene49375.t1 AT1G07430 33.714 175 66 5 226 400 233 357 8.44e-18 88.2
MS.gene49375.t1 AT1G07160 21.196 368 170 8 71 438 129 376 1.53e-17 86.7
MS.gene49375.t1 AT3G11410 34.286 175 65 5 226 400 221 345 1.99e-16 83.2
MS.gene49375.t1 AT2G34740 29.583 240 105 8 200 436 154 332 9.05e-15 77.4
MS.gene49375.t1 AT2G30020 31.250 144 85 4 301 441 263 395 1.23e-14 77.8
MS.gene49375.t1 AT2G40180 25.820 244 124 8 199 441 201 388 1.53e-14 77.4
MS.gene49375.t1 AT1G67820 30.570 193 81 5 196 388 153 292 6.01e-14 75.9
MS.gene49375.t1 AT1G67820 30.570 193 81 5 196 388 189 328 8.23e-14 75.5
MS.gene49375.t1 AT4G28400 26.512 215 97 7 226 438 105 260 4.54e-12 68.2
MS.gene49375.t1 AT4G28400 26.512 215 97 7 226 438 127 282 6.94e-12 67.8
MS.gene49375.t1 AT1G03590 26.601 203 101 4 200 393 159 322 6.63e-11 66.6
MS.gene49375.t1 AT1G34750 29.767 215 90 9 226 438 126 281 6.78e-11 65.1
MS.gene49375.t1 AT1G34750 29.767 215 90 9 226 438 126 281 6.78e-11 65.1
MS.gene49375.t1 AT1G34750 29.767 215 90 9 226 438 126 281 6.78e-11 65.1

Find 245 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTAATCCCTGGGGTTTC+TGG 0.128881 1.1:+53700021 MS.gene49375:CDS
CTCCTGCACAATTATCTTCT+TGG 0.150542 1.1:-53701723 None:intergenic
GCTAGAGATCCTCTTAAAAT+AGG 0.177908 1.1:+53701107 MS.gene49375:CDS
GCATTTATCTGGAAAATATT+TGG 0.181104 1.1:-53699564 None:intergenic
TGCTTTAACACGTGCTCTTT+TGG 0.206321 1.1:+53699584 MS.gene49375:CDS
GATGCAGGTTTCCCATTATT+TGG 0.239256 1.1:+53691066 MS.gene49375:CDS
ATGCTTCTACTGGGCCTTCT+AGG 0.241354 1.1:+53699179 MS.gene49375:CDS
GTTCAAACCTTCTTCATATA+TGG 0.241764 1.1:-53695862 None:intergenic
TCTTGGTGGAGGTTGGAAAT+AGG 0.242007 1.1:-53701706 None:intergenic
ATTAGGTGCAATGGGGATTA+AGG 0.266498 1.1:+53688875 MS.gene49375:intron
GAAGTGAAACATGGTGATTT+TGG 0.270964 1.1:+53692866 MS.gene49375:CDS
GGTTGCAGATGATAAAATTT+TGG 0.273866 1.1:+53689903 MS.gene49375:CDS
ATCAGAAAATCTTGGTGATT+TGG 0.274395 1.1:+53692901 MS.gene49375:CDS
ATCCCTAGTCAATTCCTTTA+CGG 0.281821 1.1:-53690303 None:intergenic
AGGAAATGCGCAACCTTATC+TGG 0.283971 1.1:+53696099 MS.gene49375:CDS
CTGGTGGTCAAGTTCTAAAT+TGG 0.286126 1.1:+53690369 MS.gene49375:CDS
AACCAACGCCACCACTTTGA+TGG 0.287978 1.1:-53696053 None:intergenic
GTGATGTTAGAGATGGTCTT+AGG 0.291313 1.1:+53699537 MS.gene49375:CDS
TCAATTCCTTTACATGATAC+TGG 0.307213 1.1:+53693274 MS.gene49375:CDS
GGCGGTTTGCCTCGCGTAAA+TGG 0.311764 1.1:+53690392 MS.gene49375:CDS
TTGGCGACGTGTTCTTTAAA+AGG 0.312314 1.1:+53690438 MS.gene49375:CDS
CCTCTTTATTAAAGCTATAT+AGG 0.315202 1.1:+53690198 MS.gene49375:CDS
TGGTCGTTGTACAAAATTAC+AGG 0.316460 1.1:-53693157 None:intergenic
CTTGGTGGAGGTTGGAAATA+GGG 0.316685 1.1:-53701705 None:intergenic
TTTCAGACATCTGGGCTTTA+CGG 0.320626 1.1:+53701235 MS.gene49375:CDS
TTGCTCAAGTCTTTCGTTCT+CGG 0.321277 1.1:-53696006 None:intergenic
AACTTGGTATCTGGCAGATT+AGG 0.330954 1.1:-53692246 None:intergenic
ATTCCACATATCTTGCAATA+TGG 0.333093 1.1:-53695884 None:intergenic
ATTCGCTTAAACTTGGTATC+TGG 0.334439 1.1:-53692255 None:intergenic
AGTCCCGGTCCAATGAAATA+TGG 0.334535 1.1:+53695913 MS.gene49375:CDS
TACTTCAAAGTTGAGCTTGA+TGG 0.339445 1.1:-53699361 None:intergenic
AAGCATTTATATGCTTCTAC+TGG 0.351239 1.1:+53699169 MS.gene49375:CDS
ATAAAACTGGCAAAGCCTTC+AGG 0.357027 1.1:-53693238 None:intergenic
ACTTGGTATCTGGCAGATTA+GGG 0.357697 1.1:-53692245 None:intergenic
GGCTGCCAATCAGTCACTTC+TGG 0.361010 1.1:-53690769 None:intergenic
AGATAAATTTACCTTGAATC+AGG 0.361118 1.1:-53693328 None:intergenic
GATTCCTGCAGACCAAATAA+TGG 0.365171 1.1:-53691078 None:intergenic
TAGCTATCGTTAGCAGTTAG+AGG 0.367958 1.1:-53690790 None:intergenic
AGGATTTATGCATTGATCAT+TGG 0.369541 1.1:-53693218 None:intergenic
AAAGGGCAGTATGGACAATA+TGG 0.370563 1.1:+53690969 MS.gene49375:CDS
ATAAATAGTTTACCGGGAAA+TGG 0.373233 1.1:-53688575 None:intergenic
CACGTGTTAAAGCATTTATC+TGG 0.375022 1.1:-53699575 None:intergenic
TGGTGGTCAAGTTCTAAATT+GGG 0.378816 1.1:+53690370 MS.gene49375:CDS
GATCTTCGCATTCCATTTCC+CGG 0.384363 1.1:+53688563 MS.gene49375:CDS
AAGCACTTCTTCATCGCGTT+AGG 0.394880 1.1:+53688317 MS.gene49375:CDS
TCAGGTGAAAACAGAAGTTT+TGG 0.396522 1.1:-53693177 None:intergenic
CACAATTATCTTCTTGGTGG+AGG 0.397522 1.1:-53701717 None:intergenic
GGAAGTTGTGGTTGGGATTG+TGG 0.398144 1.1:+53688896 MS.gene49375:CDS
ATTATTCAATGCCTGATTCA+AGG 0.401088 1.1:+53693317 MS.gene49375:CDS
TAGTGCGCCATCTGCTTATG+TGG 0.402017 1.1:+53701259 MS.gene49375:CDS
TACCAAGTTTAAGCGAATAA+TGG 0.403865 1.1:+53692260 MS.gene49375:CDS
ATGATACTGGTTCAGATAAC+AGG 0.403949 1.1:+53693287 MS.gene49375:CDS
AGCCTTGGAGTCTCCAATAT+TGG 0.405985 1.1:-53689929 None:intergenic
TCTAGGAATAACCTTCATTC+AGG 0.406387 1.1:+53689859 MS.gene49375:CDS
TGCTTTGAAGATCCAGAGTC+AGG 0.410523 1.1:+53697785 MS.gene49375:CDS
GGCAGCAGTTGTTGTTCCTC+TGG 0.410760 1.1:+53690990 MS.gene49375:CDS
CGTATTATTGACTTTGGAAG+TGG 0.414780 1.1:+53699127 MS.gene49375:CDS
TATGTATTAAAGAGGAGTTT+TGG 0.415898 1.1:+53693590 MS.gene49375:CDS
GTAGCATTTAGCAAAGCTTC+AGG 0.416085 1.1:-53699325 None:intergenic
ATCTACAGCAACAGTTGTAT+TGG 0.416406 1.1:+53689882 MS.gene49375:CDS
TCGACAGGAACATTGCTTCA+TGG 0.419963 1.1:+53689041 MS.gene49375:CDS
CTCAAGTAATCCTGAGTGTC+AGG 0.422575 1.1:+53693715 MS.gene49375:CDS
TTCAAGAAGACCAATAAAAC+TGG 0.423014 1.1:-53693251 None:intergenic
TTTCCCATTATTTGGTCTGC+AGG 0.423374 1.1:+53691074 MS.gene49375:CDS
GTTCTTTCATCCTCTCTGTC+TGG 0.423470 1.1:-53690332 None:intergenic
CTAGAGATCCTCTTAAAATA+GGG 0.423911 1.1:+53701108 MS.gene49375:CDS
CATAGACGGAAAGAGATGTT+AGG 0.425807 1.1:+53689092 MS.gene49375:CDS
CGGCAAAATTAGTGAGCCCT+TGG 0.426084 1.1:-53690283 None:intergenic
GAATACAAGCCATATTTCAT+TGG 0.428140 1.1:-53695922 None:intergenic
TTGGCTATAACACGGGCTAT+TGG 0.432011 1.1:+53690419 MS.gene49375:CDS
GAATTCTTCAGAGCATTTCC+AGG 0.434830 1.1:-53701066 None:intergenic
AAGACTTGAGCAAGTGAAAC+AGG 0.436937 1.1:+53696016 MS.gene49375:CDS
GATGTTTGATTAGGTGCAAT+GGG 0.439760 1.1:+53688867 MS.gene49375:intron
TACCATTATTCGCTTAAACT+TGG 0.442960 1.1:-53692262 None:intergenic
CTGCACAATTATCTTCTTGG+TGG 0.445189 1.1:-53701720 None:intergenic
CTAAATGCTACATGGTATCA+AGG 0.445631 1.1:+53699337 MS.gene49375:CDS
CGACAGGAACATTGCTTCAT+GGG 0.445851 1.1:+53689042 MS.gene49375:CDS
TGTAGGCGTATTATTGACTT+TGG 0.450655 1.1:+53699121 MS.gene49375:intron
GTGGATCATATGGTGAAGTA+TGG 0.450731 1.1:+53693615 MS.gene49375:CDS
AGCGCCACCGTGTTTGTAAA+CGG 0.454314 1.1:-53688399 None:intergenic
TTTGAAGATGTGCTGTTGGC+TGG 0.454563 1.1:+53695762 MS.gene49375:CDS
CGCAATGCCTCGTCAACACT+TGG 0.455029 1.1:-53701678 None:intergenic
TTCAAGCATCTCCCTGACTC+TGG 0.456959 1.1:-53697797 None:intergenic
ATTATCTTCTTGGTGGAGGT+TGG 0.459012 1.1:-53701713 None:intergenic
TCAGAGCATTTCCAGGATGC+AGG 0.459218 1.1:-53701059 None:intergenic
ATGTACAGGGTGTAGTTAGA+AGG 0.459269 1.1:-53693743 None:intergenic
ATTCCTGCAGACCAAATAAT+GGG 0.461614 1.1:-53691077 None:intergenic
TTCTCACCTTTAGCCTCCTT+AGG 0.462469 1.1:-53689979 None:intergenic
CTGGCAGATTAGGGTGCTCC+AGG 0.462532 1.1:-53692236 None:intergenic
GCTTGTTGATGAAGGGCATC+TGG 0.462663 1.1:-53692992 None:intergenic
GCTTACCAGCTTGTTGATGA+AGG 0.463639 1.1:-53693000 None:intergenic
GGGATTAAGGAAGTTGTGGT+TGG 0.467601 1.1:+53688888 MS.gene49375:CDS
CCTATATAGCTTTAATAAAG+AGG 0.469166 1.1:-53690198 None:intergenic
AGAAAATCTTGGTGATTTGG+TGG 0.474744 1.1:+53692904 MS.gene49375:CDS
CTGATCTCATGTCACATAAA+CGG 0.475305 1.1:-53690888 None:intergenic
GCGCAACCTTATCTGGCAAC+TGG 0.476012 1.1:+53696106 MS.gene49375:CDS
GATGGCGTCAAAATTATTGA+TGG 0.476159 1.1:+53688956 MS.gene49375:CDS
CGACAGACTTAGATCGTTCA+TGG 0.476521 1.1:+53699990 MS.gene49375:intron
GGTTAAGCATGTGGATGATT+CGG 0.477227 1.1:-53688378 None:intergenic
GAAGGGCATCTGGTATAGGC+TGG 0.481769 1.1:-53692982 None:intergenic
AACTGCTAACGATAGCTACT+TGG 0.481960 1.1:+53690795 MS.gene49375:CDS
GAATTGTGCATCTTAATCCC+TGG 0.482370 1.1:+53700012 MS.gene49375:CDS
TGATGAAGGGCATCTGGTAT+AGG 0.485113 1.1:-53692986 None:intergenic
TTGGAGTTTCGCCTGCATCC+TGG 0.489711 1.1:+53701048 MS.gene49375:CDS
GGGTCTGCTGTGTACTTAAG+TGG 0.490131 1.1:+53695690 MS.gene49375:CDS
AATTGTGCATCTTAATCCCT+GGG 0.493692 1.1:+53700013 MS.gene49375:CDS
GCATCTTGAGGGCTGGAATG+AGG 0.494687 1.1:+53699611 MS.gene49375:CDS
AGCACTTCTTCATCGCGTTA+GGG 0.496565 1.1:+53688318 MS.gene49375:CDS
TTCAGAGCACAAGAAAGCCT+TGG 0.496817 1.1:-53689944 None:intergenic
TGGCTTGTATTCAGTTATGA+AGG 0.497253 1.1:+53695933 MS.gene49375:CDS
CTGCACCAGAAGTGACTGAT+TGG 0.497735 1.1:+53690764 MS.gene49375:CDS
GAACCATATTGCAAGATATG+TGG 0.497814 1.1:+53695881 MS.gene49375:CDS
TGGATCGGCATCTTGAGGGC+TGG 0.499128 1.1:+53699604 MS.gene49375:CDS
GACATACCAGTTGCCAGATA+AGG 0.499331 1.1:-53696112 None:intergenic
TACTTGGTGGCTGCATCTGA+TGG 0.499430 1.1:+53690811 MS.gene49375:CDS
GAATCTGCTTACAGAAGCTC+AGG 0.499613 1.1:+53691096 MS.gene49375:CDS
TTATACGTTTCAAAATGTAC+AGG 0.500478 1.1:-53693757 None:intergenic
CACCTCTGATCGATTGCACC+TGG 0.502161 1.1:+53692218 MS.gene49375:CDS
TGATGTTAGAGATGGTCTTA+GGG 0.503989 1.1:+53699538 MS.gene49375:CDS
TGTACTGAACAGGTAGAGAA+AGG 0.507240 1.1:+53695669 MS.gene49375:intron
TGGTTGAAAACAACAGAAGA+AGG 0.507783 1.1:+53696071 MS.gene49375:CDS
GGATTAAGGAAGTTGTGGTT+GGG 0.510198 1.1:+53688889 MS.gene49375:CDS
CATCTTGAGGGCTGGAATGA+GGG 0.512226 1.1:+53699612 MS.gene49375:CDS
TGGTCAGTTGGCTATAACAC+GGG 0.512647 1.1:+53690412 MS.gene49375:CDS
GAGTAGCTGCCAGAAACCCC+AGG 0.513588 1.1:-53700030 None:intergenic
CTTCATTGATAGTTGAACTC+AGG 0.513812 1.1:-53693195 None:intergenic
AGGGGATTGTTGCGGAGAGG+AGG 0.515331 1.1:-53688346 None:intergenic
GTGCTTTGAAGATGTGCTGT+TGG 0.522383 1.1:+53695758 MS.gene49375:CDS
TTACAAACACGGTGGCGCTC+CGG 0.522526 1.1:+53688403 MS.gene49375:CDS
TACAGATTAGCTTCTTCCCA+AGG 0.524286 1.1:+53690266 MS.gene49375:CDS
TGCGGAGTGGCAACGAGTGG+TGG 0.524470 1.1:-53688489 None:intergenic
CAGTCTCCTAAGGAGGCTAA+AGG 0.524953 1.1:+53689973 MS.gene49375:CDS
GTCCATCAAAGTGGTGGCGT+TGG 0.525148 1.1:+53696051 MS.gene49375:CDS
CAAAACAAATTTCGACTGCA+AGG 0.529137 1.1:+53695837 MS.gene49375:CDS
TTGCCGTAAAGGAATTGACT+AGG 0.531885 1.1:+53690300 MS.gene49375:CDS
GCCTCGCGTAAATGGTCAGT+TGG 0.533001 1.1:+53690400 MS.gene49375:CDS
TTGAGCAAGTGAAACAGGTT+CGG 0.533800 1.1:+53696021 MS.gene49375:CDS
CTTACCAGCTTGTTGATGAA+GGG 0.534667 1.1:-53692999 None:intergenic
GTGATTTGGTGGATTCTAAG+TGG 0.534844 1.1:+53692915 MS.gene49375:CDS
TGATGTTTGATTAGGTGCAA+TGG 0.535874 1.1:+53688866 MS.gene49375:intron
TGCTTAACCGTTTACAAACA+CGG 0.536233 1.1:+53688392 MS.gene49375:CDS
TGCCGTAAAGGAATTGACTA+GGG 0.538228 1.1:+53690301 MS.gene49375:CDS
TGAGCAATAAGATACCTAGA+AGG 0.538448 1.1:-53699193 None:intergenic
AAACTATGAAGGAAGCCTCT+AGG 0.538727 1.1:+53689842 MS.gene49375:intron
GGCAAAATTAGTGAGCCCTT+GGG 0.540691 1.1:-53690282 None:intergenic
AAGGGCATCTGGTATAGGCT+GGG 0.541611 1.1:-53692981 None:intergenic
AGAACTCGTGTGGAAGCTGC+TGG 0.542286 1.1:+53690350 MS.gene49375:CDS
TGGCAACGAGTGGTGGATTG+AGG 0.546080 1.1:-53688482 None:intergenic
TGATGGTTCTGTTTCTGTGT+GGG 0.546242 1.1:+53690232 MS.gene49375:CDS
CAAGCCATATTTCATTGGAC+CGG 0.546801 1.1:-53695917 None:intergenic
ATCATATGGTGAAGTATGGT+TGG 0.546846 1.1:+53693619 MS.gene49375:CDS
CTGTGTACTTAAGTGGGCTG+AGG 0.547798 1.1:+53695697 MS.gene49375:CDS
TTTGGGGATTGGAACACCGC+CGG 0.552404 1.1:-53688422 None:intergenic
TCTGAACCAGTATCATGTAA+AGG 0.554413 1.1:-53693280 None:intergenic
CCATCTGCTTATGTGGGACC+CGG 0.555390 1.1:+53701266 MS.gene49375:CDS
AGATGTCTGTGATTTGTTGT+GGG 0.556957 1.1:+53690858 MS.gene49375:CDS
ATGTAAACGTATTGCATAGA+CGG 0.557005 1.1:+53689078 MS.gene49375:CDS
TACACTGAAAACAAGGATGC+AGG 0.558033 1.1:+53691051 MS.gene49375:CDS
TGCTAACGATAGCTACTTGG+TGG 0.559456 1.1:+53690798 MS.gene49375:CDS
AAGATGTCTGTGATTTGTTG+TGG 0.560429 1.1:+53690857 MS.gene49375:CDS
GTTATATCGAAAGCTTCGAC+AGG 0.561902 1.1:+53689026 MS.gene49375:CDS
CAAGGAGCCATATATGAAGA+AGG 0.563211 1.1:+53695855 MS.gene49375:CDS
CAGCACATCTTCAAAGCACA+TGG 0.569088 1.1:-53695754 None:intergenic
TCGATCAGAGGTGATACCAT+TGG 0.570089 1.1:-53692208 None:intergenic
GTACTGAACAGGTAGAGAAA+GGG 0.572856 1.1:+53695670 MS.gene49375:intron
TGCCAATATTGGAGACTCCA+AGG 0.573506 1.1:+53689927 MS.gene49375:CDS
GATGATTCGGCGTGAGTGAA+GGG 0.573961 1.1:-53688365 None:intergenic
CAAACACGGTGGCGCTCCGG+CGG 0.574240 1.1:+53688406 MS.gene49375:CDS
TGGTGTTGTGATGTTAGAGA+TGG 0.574267 1.1:+53699530 MS.gene49375:CDS
GAATGAGGGTGTGAAGGAGC+TGG 0.574520 1.1:+53699626 MS.gene49375:CDS
TGCCACTCCGCAATGCTCCA+AGG 0.577663 1.1:+53688500 MS.gene49375:CDS
GTGATCGAAGAGGTTCCAGC+GGG 0.578336 1.1:-53688450 None:intergenic
TGTGCAGGTATGTATTAAAG+AGG 0.587658 1.1:+53693582 MS.gene49375:intron
AAGCCATATTTCATTGGACC+GGG 0.588357 1.1:-53695916 None:intergenic
GACGGAAAGAGATGTTAGGT+TGG 0.594701 1.1:+53689096 MS.gene49375:CDS
AAGCTTTGCTAAATGCTACA+TGG 0.595339 1.1:+53699329 MS.gene49375:CDS
AACAACAGAAGAAGGGCAAG+AGG 0.596199 1.1:+53696079 MS.gene49375:CDS
TTTCATTGGAATTGTAACCA+AGG 0.599457 1.1:+53693644 MS.gene49375:CDS
GGTGGTCAAGTTCTAAATTG+GGG 0.601878 1.1:+53690371 MS.gene49375:CDS
GATCAATGCATAAATCCTGA+AGG 0.602560 1.1:+53693223 MS.gene49375:CDS
TGAAGGGGATTGTTGCGGAG+AGG 0.603256 1.1:-53688349 None:intergenic
AGTGCGCCATCTGCTTATGT+GGG 0.605908 1.1:+53701260 MS.gene49375:CDS
ACAGATTAGCTTCTTCCCAA+GGG 0.608955 1.1:+53690267 MS.gene49375:CDS
GATGCCCTTCATCAACAAGC+TGG 0.609006 1.1:+53692995 MS.gene49375:CDS
CCGGGTCCCACATAAGCAGA+TGG 0.610347 1.1:-53701266 None:intergenic
GAAGGACCATCCTGACACTC+AGG 0.611190 1.1:-53693725 None:intergenic
AAGAAGCTACACTGAAAACA+AGG 0.612138 1.1:+53691044 MS.gene49375:CDS
AGGGCATCTGGTATAGGCTG+GGG 0.612492 1.1:-53692980 None:intergenic
TAAATGCTACATGGTATCAA+GGG 0.615134 1.1:+53699338 MS.gene49375:CDS
TAATGAATAAGAAGATGAAG+AGG 0.616048 1.1:-53690917 None:intergenic
AGCATTTATATGCTTCTACT+GGG 0.617258 1.1:+53699170 MS.gene49375:CDS
TCTTCGACCTTGGAGCATTG+CGG 0.617385 1.1:-53688507 None:intergenic
CTCCAGGTGCAATCGATCAG+AGG 0.618244 1.1:-53692220 None:intergenic
TTTGTAAACGGTTAAGCATG+TGG 0.619327 1.1:-53688387 None:intergenic
AGTAATCCTGAGTGTCAGGA+TGG 0.619635 1.1:+53693719 MS.gene49375:CDS
AGAGGATGAAAGAACTCGTG+TGG 0.621867 1.1:+53690340 MS.gene49375:CDS
GGTCTGCTGTGTACTTAAGT+GGG 0.623133 1.1:+53695691 MS.gene49375:CDS
GGTCGTTGTACAAAATTACA+GGG 0.623669 1.1:-53693156 None:intergenic
CGGTGCGGAAGCTAGTGAGA+TGG 0.625186 1.1:+53688938 MS.gene49375:CDS
GGATGATTCGGCGTGAGTGA+AGG 0.625250 1.1:-53688366 None:intergenic
AGGTCGAAGAAAATCTCAAG+AGG 0.625421 1.1:+53688520 MS.gene49375:CDS
GGGCTGGAATGAGGGTGTGA+AGG 0.627190 1.1:+53699620 MS.gene49375:CDS
TTGCTGTAGATCCTGAATGA+AGG 0.628923 1.1:-53689870 None:intergenic
GGTTGAAAACAACAGAAGAA+GGG 0.630216 1.1:+53696072 MS.gene49375:CDS
ACACACAGGGATATTAAACC+TGG 0.631661 1.1:+53697220 MS.gene49375:CDS
ATGATTCGGCGTGAGTGAAG+GGG 0.632437 1.1:-53688364 None:intergenic
GATCGAAGAGGTTCCAGCGG+GGG 0.633018 1.1:-53688448 None:intergenic
AATGGGGATTAAGGAAGTTG+TGG 0.634124 1.1:+53688884 MS.gene49375:CDS
AGTTGTGGTTGGGATTGTGG+CGG 0.635560 1.1:+53688899 MS.gene49375:CDS
GCTATTACAGGTATGACATG+TGG 0.637987 1.1:+53699502 MS.gene49375:intron
CATTGCGGAGTGGCAACGAG+TGG 0.639290 1.1:-53688492 None:intergenic
TGAATGAAGGTTATTCCTAG+AGG 0.639688 1.1:-53689857 None:intergenic
GCTTTGAAGATCCAGAGTCA+GGG 0.642490 1.1:+53697786 MS.gene49375:CDS
TGAATGAACTGCATTCTGAA+AGG 0.646082 1.1:+53689123 MS.gene49375:CDS
GTGAGTGAAGGGGATTGTTG+CGG 0.646562 1.1:-53688354 None:intergenic
ATTGTGCATCTTAATCCCTG+GGG 0.647262 1.1:+53700014 MS.gene49375:CDS
AGTAGCTGCCAGAAACCCCA+GGG 0.648173 1.1:-53700029 None:intergenic
GACCTTGGAGCATTGCGGAG+TGG 0.648976 1.1:-53688502 None:intergenic
AGGTATGACATGTGGAGTGT+TGG 0.649398 1.1:+53699510 MS.gene49375:intron
CGATCGCAATATCACACACA+GGG 0.649899 1.1:+53697207 MS.gene49375:CDS
ATGGTCAGTTGGCTATAACA+CGG 0.652150 1.1:+53690411 MS.gene49375:CDS
TGATAGGTTGAAGTGAAACA+TGG 0.652421 1.1:+53692857 MS.gene49375:intron
GGTCAAGTTCTAAATTGGGG+CGG 0.652501 1.1:+53690374 MS.gene49375:CDS
TACTACGTCCATCAAAGTGG+TGG 0.655382 1.1:+53696045 MS.gene49375:CDS
GAAGATTTGAAAGATTCCAG+AGG 0.656765 1.1:-53691006 None:intergenic
GCATTTAGCAAAGCTTCAGG+AGG 0.661051 1.1:-53699322 None:intergenic
GTGATGGTTCTGTTTCTGTG+TGG 0.661246 1.1:+53690231 MS.gene49375:CDS
GGATCGGCCAAGTGTTGACG+AGG 0.662296 1.1:+53701671 MS.gene49375:CDS
GGATACTACGTCCATCAAAG+TGG 0.662788 1.1:+53696042 MS.gene49375:CDS
TATACGTTTCAAAATGTACA+GGG 0.664830 1.1:-53693756 None:intergenic
TATAGGCAGACAGAGCGTGA+TGG 0.668590 1.1:+53690215 MS.gene49375:CDS
GACGAGAATTGTGATCGAAG+AGG 0.668622 1.1:-53688460 None:intergenic
TGTGATCGAAGAGGTTCCAG+CGG 0.668743 1.1:-53688451 None:intergenic
ACTCGTGTGGAAGCTGCTGG+TGG 0.671105 1.1:+53690353 MS.gene49375:CDS
ACGATCGCAATATCACACAC+AGG 0.679536 1.1:+53697206 MS.gene49375:CDS
TGTGTACTTAAGTGGGCTGA+GGG 0.679721 1.1:+53695698 MS.gene49375:CDS
GCCAACTGACCATTTACGCG+AGG 0.686631 1.1:-53690401 None:intergenic
ATGTTTGATTAGGTGCAATG+GGG 0.693914 1.1:+53688868 MS.gene49375:intron
GGATCATCATCCAGACAGAG+AGG 0.695616 1.1:+53690322 MS.gene49375:CDS
GAAATGGAATGCGAAGATCG+AGG 0.704163 1.1:-53688559 None:intergenic
TTTCGATGGTCATAACGGTG+CGG 0.715714 1.1:+53688923 MS.gene49375:CDS
CACATCTTCAAAGCACATGG+AGG 0.716246 1.1:-53695751 None:intergenic
CAAGTGTTGACGAGGCATTG+CGG 0.724863 1.1:+53701679 MS.gene49375:CDS
TGATCGAAGAGGTTCCAGCG+GGG 0.731401 1.1:-53688449 None:intergenic
TTAACCGTTTACAAACACGG+TGG 0.787662 1.1:+53688395 MS.gene49375:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.1 gene 53688308 53701734 53688308 ID=MS.gene49375
chr1.1 mRNA 53688308 53701734 53688308 ID=MS.gene49375.t1;Parent=MS.gene49375
chr1.1 exon 53688308 53688584 53688308 ID=MS.gene49375.t1.exon1;Parent=MS.gene49375.t1
chr1.1 CDS 53688308 53688584 53688308 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53688880 53689144 53688880 ID=MS.gene49375.t1.exon2;Parent=MS.gene49375.t1
chr1.1 CDS 53688880 53689144 53688880 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53689653 53689758 53689653 ID=MS.gene49375.t1.exon3;Parent=MS.gene49375.t1
chr1.1 CDS 53689653 53689758 53689653 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53689853 53689994 53689853 ID=MS.gene49375.t1.exon4;Parent=MS.gene49375.t1
chr1.1 CDS 53689853 53689994 53689853 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53690198 53690459 53690198 ID=MS.gene49375.t1.exon5;Parent=MS.gene49375.t1
chr1.1 CDS 53690198 53690459 53690198 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53690750 53691117 53690750 ID=MS.gene49375.t1.exon6;Parent=MS.gene49375.t1
chr1.1 CDS 53690750 53691117 53690750 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53692208 53692281 53692208 ID=MS.gene49375.t1.exon7;Parent=MS.gene49375.t1
chr1.1 CDS 53692208 53692281 53692208 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53692863 53693016 53692863 ID=MS.gene49375.t1.exon8;Parent=MS.gene49375.t1
chr1.1 CDS 53692863 53693016 53692863 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53693146 53693338 53693146 ID=MS.gene49375.t1.exon9;Parent=MS.gene49375.t1
chr1.1 CDS 53693146 53693338 53693146 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53693589 53693781 53693589 ID=MS.gene49375.t1.exon10;Parent=MS.gene49375.t1
chr1.1 CDS 53693589 53693781 53693589 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53695681 53696127 53695681 ID=MS.gene49375.t1.exon11;Parent=MS.gene49375.t1
chr1.1 CDS 53695681 53696127 53695681 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53697184 53697241 53697184 ID=MS.gene49375.t1.exon12;Parent=MS.gene49375.t1
chr1.1 CDS 53697184 53697241 53697184 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53697771 53697858 53697771 ID=MS.gene49375.t1.exon13;Parent=MS.gene49375.t1
chr1.1 CDS 53697771 53697858 53697771 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53699126 53699200 53699126 ID=MS.gene49375.t1.exon14;Parent=MS.gene49375.t1
chr1.1 CDS 53699126 53699200 53699126 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53699297 53699380 53699297 ID=MS.gene49375.t1.exon15;Parent=MS.gene49375.t1
chr1.1 CDS 53699297 53699380 53699297 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53699512 53699655 53699512 ID=MS.gene49375.t1.exon16;Parent=MS.gene49375.t1
chr1.1 CDS 53699512 53699655 53699512 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53699996 53700077 53699996 ID=MS.gene49375.t1.exon17;Parent=MS.gene49375.t1
chr1.1 CDS 53699996 53700077 53699996 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53701047 53701129 53701047 ID=MS.gene49375.t1.exon18;Parent=MS.gene49375.t1
chr1.1 CDS 53701047 53701129 53701047 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53701233 53701287 53701233 ID=MS.gene49375.t1.exon19;Parent=MS.gene49375.t1
chr1.1 CDS 53701233 53701287 53701233 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
chr1.1 exon 53701669 53701734 53701669 ID=MS.gene49375.t1.exon20;Parent=MS.gene49375.t1
chr1.1 CDS 53701669 53701734 53701669 ID=cds.MS.gene49375.t1;Parent=MS.gene49375.t1
Gene Sequence

>MS.gene49375

ATGATTAGAAAGCACTTCTTCATCGCGTTAGGGTTTCTCCTCCTCTCCGCAACAATCCCCTTCACTCACGCCGAATCATCCACATGCTTAACCGTTTACAAACACGGTGGCGCTCCGGCGGTGTTCCAATCCCCAAAATGCCCCCGCTGGAACCTCTTCGATCACAATTCTCGTCCTCAATCCACCACTCGTTGCCACTCCGCAATGCTCCAAGGTCGAAGAAAATCTCAAGAGGATCGCACTCTCTGCGTCCTCGATCTTCGCATTCCATTTCCCGGTAAACTATTTATTTGACGTAATAGTTAATTACAGTAATCAGTTATAGTTAAGTTTCATCGGAAGAGTTAGTTACGATAATTCGTCACAGTGATTAGATAAGTTTCATAATATAGTTAATTACAATAATCAGTTACACTAGTTAGTTGAGTTTCATTGGAAGAGTTAGTTACAATAATTAATTACTGTAATTAGATAAATTTCACAATAATTAGTTACAATAATTAGTTACAGTGGCTAGTTAAGTTTTGTTCGCAAGAGTTAGTTATAATTTTATGTGTTTGATGTTTGATTAGGTGCAATGGGGATTAAGGAAGTTGTGGTTGGGATTGTGGCGGTTTTCGATGGTCATAACGGTGCGGAAGCTAGTGAGATGGCGTCAAAATTATTGATGGAGTATTTTGTTCTTCATACTTATTTTCTTCTTGATGCTACGTATTCTGTTATATCGAAAGCTTCGACAGGAACATTGCTTCATGGGAAAGATCATGATCATGTAAACGTATTGCATAGACGGAAAGAGATGTTAGGTTGGCAATTGAATGAACTGCATTCTGAAAGGTGCTTTTGCAATTGCATCTATAGTTTTAGTTTTTGTTAATAGATAATTGGTGAAAGGTGTTTCTGTATATCTAGTATTGTTGATCAAAGGTTGAGTATATAGTTTATTATGAAGCACTGACACAAAGACGAACACATCAACTCTAGTAATAATTTGAGAAAATAACATAATTGAATGTAATCACATGTGTAAGTGTCGGACTCCGAACTTGCGTTCGATCAGAAGCATCAGTGCTACAGTGTTTATTATGAATGATTGGTTTTATGTAGAGCTGTGAATGTCAGTGACATGTTAGTGCTTTTCTAATAATGAATGTGTGTCAGTTAGAAATGCGTAATCAGGTACATAGCGTTTTGAATGTCAATTATGAATGATTGTTTTGTTGGTGTACAAGTGTGCTATGTACAAGTGTGCTAAGTGTTTCAGTTTTCAAACAGCATTTAGTTTTACATTAATTCCATTTCTCACATTTGTGTGTCTATATCTCAACTAAAAAAACCTTTCCAGGTTGCAGAATACATTTTCTGCTAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAAGAAGCATTGTTGAGAGCAATTCATGATATTGATGAAAAGTTTTCTGAGGTAAGTTTGACTTTCTGTTCAATTTTACAAAAACTTCATTTGGTACTTTTTTGTATGTGTTCTTGTATTGACATCTTTCAATTAAACTATGAAGGAAGCCTCTAGGAATAACCTTCATTCAGGATCTACAGCAACAGTTGTATTGGTTGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCCAAGGCTTTCTTGTGCTCTGAAAATTTTCAGTCTCCTAAGGAGGCTAAAGGTGAGAAAGATTATAAAATATAACCAAACTTCCATTGTTAAAAGATATAAGTTTATCATGGCAATATTAGGATATTGTATGTTATTCTTTTGTCTAAATATATCAGTATTATATAATGCGTGGTTATGATAATGTGACCAGCATACTTTTTATTGAAATGAAACACGACTATAAGGTTGTTAATTTCAATTTTTTGTTTGTAGCCTCTTTATTAAAGCTATATAGGCAGACAGAGCGTGATGGTTCTGTTTCTGTGTGGGATCGTGAAAAATACAGATTAGCTTCTTCCCAAGGGCTCACTAATTTTGCCGTAAAGGAATTGACTAGGGATCATCATCCAGACAGAGAGGATGAAAGAACTCGTGTGGAAGCTGCTGGTGGTCAAGTTCTAAATTGGGGCGGTTTGCCTCGCGTAAATGGTCAGTTGGCTATAACACGGGCTATTGGCGACGTGTTCTTTAAAAGGTAGGTTCGGCGGAAATCATTTTCATAAACTCCAAGCCAATATCAACTTATCAAGTGTATCTGCAGCCTTATGTCATGTGCAAGGCGGTTCGTGTTTAGATACAGATTTAAACCAAGTCTCATTCTTAAATTAAGATTAAATTGCAAAATGGTAGGGAAGGACATGTGCTTTCTTCAAAACCAAAGCACTAATGCGTGTGGGGCTAATAATTTAAAATTTCAGGGTGACTGGTTTCTTAACAATTATGTGTTGAAATTGTAACACTTTTCTCATAATGAACTTTCAACAGTTATGGAGTTGTATCTGCACCAGAAGTGACTGATTGGCAGCCTCTAACTGCTAACGATAGCTACTTGGTGGCTGCATCTGATGGAGTCTTTGAGAAGTTGAGTGTGCAAGATGTCTGTGATTTGTTGTGGGAAGTACACCGTTTATGTGACATGAGATCAGATTGCACCTCTTCATCTTCTTATTCATTAGCAGATTTTATTATTAATACTGCCTTAAAAAAGGGCAGTATGGACAATATGGCAGCAGTTGTTGTTCCTCTGGAATCTTTCAAATCTTCTGCTAACTCGCTTAGAAGAAGCTACACTGAAAACAAGGATGCAGGTTTCCCATTATTTGGTCTGCAGGAATCTGCTTACAGAAGCTCAGGTATGTTTCATGGGTTTAAACAATGAGCTTCATATGTAAAGTTCAAGATACATTACCTCAAGATTTCCTCCCTATGATGATTGCTAATGCATATCAGTTTATACATAATGAATTGAATGTATATGGTATAATCAACAAGGTTTGGTTCATTTTTTCTCATTTAACAGGAAATTAATGTATATACTATTACTCTGACCTCTCCTGCAGTTTTCAAATCCTTTGCTTCACTGCACGAATTACCCCCATGTTATAATTATTCCATATGCCTACTGCTCCTTCACACAAACTTTAAAATTTTACTCGGATGAGTTTTCTAAGTATCACAAACTTCAAGTAAAGTCAATTTTTAAAAAGGAAAATTATTAAGAGGAAAAATATTACGAAGATAAAGAAGGATGATCCTAACTCCTAAGCAAAACAATATAAAAAAAATCAAGAAAAAAGCCAAAATATATTCTAGCAGTAACAGTTAGGGAAGAACTAAAGAACACGGGAGCATGGCAGTAGCAATTGGGGAAAAAAGCACACAAGAAGTAGGGTATATGACTGGCTGACAGTCACGGGAATACCTAAAGAAGATAGGGGGAAAAACATGAAAGGATGGAACTTTGGATTCAAAGACGGGTACTCTTAAAAAAAGCTCAGTAAAAGCTATCAAGAAGGTCCTCCCAACACCTTTTTAAAAGATCCTTTTATTTAGTTTTGCATCTAAGAAAGAGATAAATCTTTGGCCCAGCTTCGTTAAGGAGAAGAGATGCAAAAAGAAAAAAAAGGTCAGGCCGAACAAGCTCTGTGTGACATGTGCACAGAGATGCACATAATAGGCATGCTATATGTGCTCATTTTACTTATCGACGCAGTGTTACAAAATTATCTTTTCTAGATGCTACATTTGGCGTTCATTTGTATGTAACAATTGCTTATGTGATGTTTAAATTCAATGAAAAAAATAAAATAAAATTATCCAAGTTCTATGCTCGGACAGAAACTTAAATGATCACTAAATTTATTTAATCTGGTTGTTCCCTTATGTAGCTCGTGTTTTTTTATTGATTCTTATCAACTAATTTATTATTTGGAACTTACTCAGCCAATGGTATCACCTCTGATCGATTGCACCTGGAGCACCCTAATCTGCCAGATACCAAGTTTAAGCGAATAATGGTATGGCTGAAAGCCATCAGATTTATTATTGCTGATTTCTTTATTATTTTGTTTATGTCATAAATTGAATGTTTCTATGAAATTCAGGAATGCATTGATTTTTAAGAGCAGACTAATTGTATTTTGTCAATTTTAATAAAACTCTTGTATGATGACAATATATTGTTTGGTGGTGGGGTGCATAAATAGTAGGCATAAAAGTTGTATTCTTTATTTGAGACTAGGCAACAAAGTTTTTCTATGCACATAATTTGATTATTAATTTCTCATTTTTCCACTTTCTTTGTGATGAAATGTAATTTTTGGCCGATTTATTAGCATTTTTGGTTGAAACCAAACCAGTTAATGTATTGCCAAAAAGCATTTATTTTTCTTTTGAAGTCCCATTTTTCACTGAGATACAGGTGTAAATTTTCAATTTTTGGGAATTTAATATCTTTATGTGTGTCCGCAAAACCAAATTTTCATCCTTGTCTATATGTTCTTTTAATATCATAATAAGTCATTGCACTTTGAAACAGAGAGATCCCTCTGATCAAAATTAATCTGAATAAATTCCTTTTGGTTTCCTTTTATGATAGGTTGAAGTGAAACATGGTGATTTTGGGTGTTTTTATTTATCAGAAAATCTTGGTGATTTGGTGGATTCTAAGTGGCTTGCCAAAAAAGATGACTGGGAAGACTATTTGTATGAACTACCCCAGCCTATACCAGATGCCCTTCATCAACAAGCTGGTAAGCGAAAATGTGATGCTATCTCTCATTATGTAATCTTTATGCACTTTTTAAGTTTATCTTAACTTACTGTCCTTATCTTACATTTTAGTTGACGATCAAATATACTTTGGTCGGTTCCTTTTTCAGTAGTAGATGGCCCTGTAATTTTGTACAACGACCAAAACTTCTGTTTTCACCTGAGTTCAACTATCAATGAAGCCAATGATCAATGCATAAATCCTGAAGGCTTTGCCAGTTTTATTGGTCTTCTTGAATCAATTCCTTTACATGATACTGGTTCAGATAACAGGTCTTCTGATTATTCAATGCCTGATTCAAGGTAAATTTATCTGCTTTCAGTTTCTATGCAGTGATACATCTATAAGCCGATATATGGTTGCTAGTAAAAGACACAGGCAGTATCTCGACCAAAAGTTGATATTCCCTTGAGTGTGTTTTATCTGGATGGCCAGTACTATCACTGCCATTACGTGTTGTTGTATGAGTTGAGCTTTTTCCCCTGCAAATTTGATGCTTTAAGTGTATATCTTTAGCCCAACAACTGAGACAATGTGCATTTTGGTGTGCAGGTATGTATTAAAGAGGAGTTTTGGTCGTGGATCATATGGTGAAGTATGGTTGGCTTTTCATTGGAATTGTAACCAAGGTAATATTACTGCAAAAATGAGCAAGGGTGACAATAATAGAAACAGCAGCTCAAGTAATCCTGAGTGTCAGGATGGTCCTTCTAACTACACCCTGTACATTTTGAAACGTATAATGGTAATACATTTGAATGAAGCAGAACTATATTTAATGGTTTCGGTTTATCAGGATCTCTTTGGCTGTCATAAATTCATAATGCATTGTGAATTGTGAGAAAGAAGTATAAACCTATTTTATTACCACAACATAATTAATATGCAATAATTTTGTCGCCTTGCTGATTTGTACAAATTACGATCTGCACTCCCTGGGCTTTATTTAGAGGCTTGATATGTTTTTTCATCCCTATAAACATTTCTAGAAGTTGCGCATTGTGCGCTATGTGGATTATTTAGCCCAAGAGGGAGCTGCTCGCAGATGCGGAGACAATGGGCGGCCCCCTGGTGCCATGGTCACCCCCAAATTTTTTACTTTACTTAACACCCATATGTCAAACTACATCGAGGTCCCCTCGTAACACCACTCATGACATGATAGACAGATAGGATACAACCACGTCTCTTCTCATTTTTTGTTCTCGCACAACCACCTTGTTCAATTTTTTCTTCCTTTGCTAGACTGCTACTGTGTGTATGTGTTTTTCTGAGTGGTTGTGACTTGTGAGTCGTTTGGTTTCTATCTCTTTTTTGTTATCACTGCTTTTCTTTAAAGTGAGGGTAGCTTTAGTCCTTTCATTTTTGTCTTGGTTTTTCAATAAGTTGTGGCTTCATGGGAAGCTATCCCGCCCATGTTTCTTTATTTTTGTTGCTTCCATTCCTTCTTTTGTCTTTGTTGGTGCTTCTGATAATGCTTTTAATACCTTTTGAATATAAATTTTAAATTTGATTTTAACTTTAACTTTGATTTTTAATTTTATTTTGCTTGATTATTTTATTTCTATTTTAGATGACTAATTCAATATAATTTTTAAAAGCAGTACCTTTATTATTTTCCTTCTTTGCCTCCATCGAGTTCAAAGGCTGGCTCTGCCCCTGGCAGCTTGCCTTATTCTATTAATTAATGGAGAATGTTAACCATTAATTAATTTGTCTTTCTTCAGCTGCTGTTGTGCACTTTGGGTCTGGTCCTCCTTTGATCCTTTCTCATTTCTCTCTGAAATTCGCCCAATCAAAAGAAAGGGGGATATGTGCATATAGACTTGGTGCTCTGTTAAGAACCATAAGCAAGAAAATAGAAAAAAGTGAAGGAAGATGAGTGGGAAAATTTGTAGTGTCTGTGTCAAATGAAATTGAAATCTGAATTGAGTAACTGAACTGAATACTGTTAGGACTGGTATCTAAATCACTAGGATATACCGAATGTACTTGGATGGTATTGAGGAATCATCCTTGAAACAATGTTCCAAAGAGCAAAGATTATATACACACGGACAGGAAATTGAGCCCCTGCCCTCTCCTTAACCAAGCGGTTCCTTCTAAATAAATTCCTCCCTTAATTCAAATAACAAACTAGTGTATATAGAGTTACATCCATCACGTAATAAAACATAACTGACACAATTAACATATCTGTTCCTAAATAATAGCTACTACCGATAACATAATAACTGCCTAATAATATTTACTAATAAGAGGTTACACGGAAGGCCATTTATGGGGGAGAGAAGGAGAGAAACAGTTACAAATTGTTGAAACAAATTGCAACTGTTAGATTCTGTTAATAAGATAATCTCACCCACTAGAATCTTCTATGGTGAGTAACACCTATGTAAGCGGCATTGTTGTCTGATGAGGTCCAAGGCCCTAGTCCACAATATACAGAACAACACAAAGCTATCAACAGAAAACATAAAAGTTAAAACATAACAGAAAGCATAAGCTACACTTATCTCTAAAATGCTCTTTATCTTTTTTGCTTAGACTTTCTAAGGGGAAGTTTTTGTGTTCAGTAGGCACTGTATTTTTATTATACATATGTAAGCAGGTTATACAGATAACTCTTGATTGTACTGAACAGGTAGAGAAAGGGTCTGCTGTGTACTTAAGTGGGCTGAGGGAAAAACATTTTGGAGAAATTTTCTTAAATGCCTCCATGTGCTTTGAAGATGTGCTGTTGGCTGGAAAATCTAACTGCGTATACGAAACATCACAATATGATTCTGAGTATTCGTTTCAAAACAAATTTCGACTGCAAGGAGCCATATATGAAGAAGGTTTGAACCATATTGCAAGATATGTGGAATCTTTTGAGTCCCGGTCCAATGAAATATGGCTTGTATTCAGTTATGAAGGAGTGTCATTGTCAAAACTTTTATATACTGTAGAAGATGCAAACAATACTGCCGAGAACGAAAGACTTGAGCAAGTGAAACAGGTTCGGATACTACGTCCATCAAAGTGGTGGCGTTGGTTGAAAACAACAGAAGAAGGGCAAGAGGAAATGCGCAACCTTATCTGGCAACTGGTATGTCTTCAATGTAGGTTTGTAAGGGGTATTTATGTTATCCATATGGTTCGCTAATATATAACCATGAAAACTACGACAACACAACAACTTCCCCCCCCCCCCCCCCCAATAAGGATTCGACAAAATTTAGTTTCTTGTTTTTACCATCACTGTTGTTATTTTTATTTGTATTATTGAACATGGTGTTAAACAAAAGTGAGATCAGTGTACCCACCCAATGAATGTGGAAAAGTTAATTTCTTTCTCAAAGGGAGGATACATGGATACAAAAAAGGAAAAGGACACTGTTACTATAAACCTTTTATGAGACCTCGTGTAATAGCTTTGGCTTCTAAGAGATTTGTTCTCAAAGGGAGGATACATGGATACAAAAAAGGAAAAGGACACTGTTACTATAAACCTTTTATGAGACCTCGTGTAATAGCTTTGGCTTCTAAGAGATTTGGTCTTTGACATGGTTTCAGAGCCTCCGTCCAAATAATCATAAATTTAATCCTCGCTGCCCCCATTCTTCTTAATTGAGGTAATTTAAGTATAATATGGCTTGTTAAAAAAAAAAGTACAAGTAAGATGGGCCTTAGCGTTCCAAGCATCAGGCGCAAAGGATCTTTGTTAAGCAGCTTTTTAGATATAAAACCTTTTATAAGCCTTTGCTAGCTACTTCTTTTAGGAGAGTTGATCCTTGACAAGAATACAATTGCAATATTAGAGCAAGAACAATATCGATCATTTCTGCATATTACATCAAGTGTTTACATGTTAACTGCTTTATGTGCAGCTAAGGCATGCACCTTTTCTGTCTGTTTTTTATATATCATAAACCTCTCTGTCTTGTCTTTTCATGTGTATATTCCGTTTTTTTTTTCTTCTTACTTTTAAAAATTGTACTCATAATGTGATCCAAACCGATTCAAACAAGACTGCAAAACGATTCCAAAAACAAACCTAAAACCGAACAAAACTGATTTTACCAATTTTTCTTGAATGCTTTTTGGAACTCTTTCCGATCAAATATCAATTTATTTTTACTAATATTCTCTTTTATTTGCTCAGTTATTGGCACTCAAGTCTTGTCACGATCGCAATATCACACACAGGGATATTAAACCTGGTAAGACATGGGGGTAGTTTGTGGTGCATAAGGGATGTATGCTTGTAGATTTCTAGATAAACACTATTGTTTCATAAAGGATATCAATCATTTGGTACTGCTAAATTTGAAGTCACTAATGTTGAAGCACTTGATGTAAATGCTAAGTGGATTGTATTTGTTCAGATGTTAATTTATTTTATGGAAACTGACATGTTGCTATATTTTATAATAGACCCTCTTAATCAACCTGTCTTCATTTTGGGTTTCTAGATTTGCTACAACTAATTAAGCTGAAATCAATTCTGGTGATTCAATAGAATTTTTTTTTCTCAAATATGTGGGATCTTTGTCTCACTTTGTATTTAATGTCTAATTGGTTAAAATACTATTACGATGGCCCTTTTTCTGCGGTCCATAATAAGACTGCAATCTGTGTCCCTCAGATGTATGTATCTGTGAATTTTCTTTTTATTATAATGTATTGTTCAATTGAAAGAACTTGTTTCCTTGTAAAATGTAACTGACTTGAGGTATGTTATTTTTGAAGAGAATATGGTGATATGCTTTGAAGATCCAGAGTCAGGGAGATGCTTGAAAGATGCTCCAACAAAAGTGAATAATTTTTCCACCAAAATGTATGGTGAAGTATTTTAGTATCCTTCTTTTATTCTAACCTTTTTTTTAGAATAAAAAATTGATGGGAAACAATTTACTCTTTTATGCTATATATTTGATGTATAGTTAACTTGCTTCTATTTATAATATGATTTGATCTATTGTGGTTAATCCATATTTTGTGTGCATACTGTGCATTTAGTGTTAACATTATCCTACATAATGAGCAGAAGTAATTTCTTGAACTCTTTGCCCAATGTGTTTCATAGTTTTGGTGTTCGTAAAAGTCTTCCTGCTAATGGATTTCCTCTTTTTAATGTTTGATAATCTAAAATGTTTTTCCTTCTCTTCCCCCACCCCTAAATTTTGAGTTAAGTTGGAGAATGACTGATGGCGGTATATAGTACTTGAACATATATTTCAACTTTCAAGTAAATTACTGCTCTAATCTGAGATATTCAAGAAACCATTTGAATATATATCTTTAAATCCACCAATTTATCTTGATGATCCTCAAAGAATTCCTGTGAACTGCATACCCTTCAAAGGATTGATCTTTTAGCATCTCTACCAGTCAAAGTTGGCCAACTAAGTTGGGCAGTAGGACTTTCCATGATGTTAAAATGTCAAGTCTTGATTTGTTGTTTGCATCAATAAGAGTACCCATCTAGGGACTTCCCTGTCTATGGAAGGGAATCTCTTTCCACTTCTTTCTTACTATTCTTCTTATAGTTTAAATTATCTGCAATTTGGATGCACATTTAGTGTTCCTTGGTTTCAGCACATCTATTCATAGTGGGTCTACTGTTAGTTATGTATCAGTGGATCCGGGCATCCGGCCGTCAGTTATGGTGACATTTTGCATGGATGTGCGTTAAGTAGAATTGCAATGCTTGCATGGTTCTTAAAGTATTGAAGTTTTCTTTGATCCTTTCTTACAGTACATTTGGACTTGAGACTTATCCATGTTATCTGGTGCATGAAAATTCTAAATTAATTTCTGATTTCCTGATACAATCTTTAATCCGGGCTTAGTTCAATTGATATCCATGTTTGACTATCTCCTGCTTACATTAAGAAAAAAATTTCTTTATCTGGTTTTTTTGTATATAAATTGATAATCATTGGTTTGAGTCTTCGACAATGATAGCAGTACAACTGGGTTATTGCTTACCTTTAAAATTGGATTTGGCTATCAAATTATTTGCATGTGTGTGTGTATACGCATGCATGCATATTTTACTGTTTTGCTTGCTGAATTTGATGTCCTTTTTCTGTTTCTTGTAGGCGTATTATTGACTTTGGAAGTGGAATTGACGAGTTCACAATAAAGCATTTATATGCTTCTACTGGGCCTTCTAGGTATCTTATTGCTCAGTCTAAATACTAGTATTATTTACTTATTTAATTTATTTATATGTGATTTTTGTGATAAACGTGTGCTTTATGTTATTTCAGAGCTGAACAAACTTACGAGTACACACCTCCTGAAGCTTTGCTAAATGCTACATGGTATCAAGGGCCATCAAGCTCAACTTTGAAGTATGTCATATTTTGCATGACTTACGCATCTTGTATTTCTTTTTCTAAAAGATTTTGCATGATTGTTTGGTGGATTTAGATTTTAGATGGTATTACTTGAAAATTTTGAAGCAATCTTTCTGCTATTACAGGTATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGATGGTCTTAGGGACACCAAATATTTTCCAGATAAATGCTTTAACACGTGCTCTTTTGGATCGGCATCTTGAGGGCTGGAATGAGGGTGTGAAGGAGCTGGCATACAAGTAAGTGTGCCTTTTAGAAGGCTGTAATCATAACCTTCTTTAATACTGTAAATTTTTGGCCCTCTGACAATAATTTTTTCTCTATAAACCAGAAAGACAGCTAACATTAATTCATGTAATTCATGTGGTGCACCAATTTCATAGTGAGTGCACTGAGTTATTTATTTATTTTGTTTCCCGAGATGCCTTCTAAGCCAAGATTGCTTGCTGATGGTTTTTAGTAGTAGTTGTAAACTCAACTGTGAATTTGTAGCACAACGCTAGTTCATTCTGAAGACTTGCATATTTGAACCTCTGGAATCTATATTATCGCTATTTATTTTATTAATGTGGCCGACAGACTTAGATCGTTCATGGAATTGTGCATCTTAATCCCTGGGGTTTCTGGCAGCTACTCAAAAAAGTATCACAAAGTGAATCAAGTAAGTTTACCTTCTTAGCCGGGACAGTCTCTGGTTCATGACCTTGTCAAAAGCTAATTATTTTGTTTAAACTTTTTCTCTTCTTAATGTATAACGTTGGTTCACAACTTTTACTTTTATGATGGAAAATGTTTTGTTGTAATAATGTTATAAATGAATTGGTTTGGTTCTGTTGATTCTTCAAAACTGAGCTTGTTTTCAACACAGATAAGTAGTGACTAGAGACAAAGATAATCTCCAAAGTTCAGGTGCTTATTACTTAAGAACTCTCCCAATTCTAATATCCCAAAGATAATAACAGTAGGTAAATATGATTTAGAAAAGGGTTTATCATCGGAGTAAGAAGCCTCTCAGATCTGGAATTTTATAATTCCCCTAAAAGATGGCTGGATGCATATCCCTAGGATTATTTAATGTTTATCAACAACCGTTGTGGCCAGCCCAACATGTCAAAGCTCAAATTTCTTCAAAAAAATAAGATGTCAAAGCTCAAATAACCTTGAGGTTTAAAATGCGTTGAAAAATACAAGACTATTTATATCTTCCTGTTTCTCAATCATTTTGTATGGTTGGCCTTACCTAAACTGCATTACTGATGGAATGATATTGTCTCCAATATTTACCGAGAATTCAATTTATTCAGATATCTATTTAGAAAAATATTTGTTCAACCTAGTCAGAAACATGGACCAAAATCTTGGATTTCATTCCCTTGGGGAAGATTGACTTGAAGCTTTGATTGTCTGTTTCTAGATTAGTCCATTCCAATGGTTCATAGGCTGTGGGGTCAGTAACCTTGCGTTGAGACAAAAGTTACAAATTGTTACTTCTCACAAAAGCCAACACTGGAACGCGAAACAAACCATCTCTATGGTTCACAAACATGCTTTAGTTGTTGGAGACACACTGCCTTCCAACTTCCTTATTTGAATATATTGCCTAATGAAGTTTTCTTTTCTGTCATTATAGGTTGGAGTTTCGCCTGCATCCTGGAAATGCTCTGAAGAATTCTTTTCTAGACAAATTAAGGCTAGAGATCCTCTTAAAATAGGGTTGGCTGGCTAACTTTTTATGCTTTTATCGTGCTATGAAATATATTTAGTCTTCTCCTATGAAGCAGTTGTTCTCTTCATAACATTTTTGTTAGTCTTGCAGTTTTTCAGACATCTGGGCTTTACGGTTAGTGCGCCATCTGCTTATGTGGGACCCGGTAAGTTTCCTGATAACTTTTGATTGTAATTTTGTGATCCTAAAGTTCCATATTTCAAAAAAGTTTGTTCAAAGAAACTATCTAAACTATTTGCCATCCTGGTCTTAGCATTAAAATTTGATTGCCCTGTGTGCAGCTGTACTAAACACTCTAATATCTTAGTAATAGGAGCTTAAGTTTATTTCGCTACAAAGGCTGTTCATTTATTTTAGTTTTTACTGTGTGTGAAGTTCAACAAAACCTCATTTTATCTTCGTTCTATTCACCAAAAGAAAAGAAAAATACTTTATATTCGTTCTTGTCAATCTTTTGGTCAACAACTGCTTTAGTTGGGTAGTGTTGTATCTGATGAAGGTCTCTTACTCTCTTTATATTTTGCAGGAGGATCGGCCAAGTGTTGACGAGGCATTGCGGCATCCCTATTTCCAACCTCCACCAAGAAGATAA
Protein sequence

>MS.gene49375.t1

MIRKHFFIALGFLLLSATIPFTHAESSTCLTVYKHGGAPAVFQSPKCPRWNLFDHNSRPQSTTRCHSAMLQGRRKSQEDRTLCVLDLRIPFPGAMGIKEVVVGIVAVFDGHNGAEASEMASKLLMEYFVLHTYFLLDATYSVISKASTGTLLHGKDHDHVNVLHRRKEMLGWQLNELHSERLQNTFSANFDDSFHLEILKEALLRAIHDIDEKFSEEASRNNLHSGSTATVVLVADDKILVANIGDSKAFLCSENFQSPKEAKASLLKLYRQTERDGSVSVWDREKYRLASSQGLTNFAVKELTRDHHPDREDERTRVEAAGGQVLNWGGLPRVNGQLAITRAIGDVFFKSYGVVSAPEVTDWQPLTANDSYLVAASDGVFEKLSVQDVCDLLWEVHRLCDMRSDCTSSSSYSLADFIINTALKKGSMDNMAAVVVPLESFKSSANSLRRSYTENKDAGFPLFGLQESAYRSSANGITSDRLHLEHPNLPDTKFKRIMVEVKHGDFGCFYLSENLGDLVDSKWLAKKDDWEDYLYELPQPIPDALHQQAVVDGPVILYNDQNFCFHLSSTINEANDQCINPEGFASFIGLLESIPLHDTGSDNRSSDYSMPDSRYVLKRSFGRGSYGEVWLAFHWNCNQGNITAKMSKGDNNRNSSSSNPECQDGPSNYTLYILKRIMVEKGSAVYLSGLREKHFGEIFLNASMCFEDVLLAGKSNCVYETSQYDSEYSFQNKFRLQGAIYEEGLNHIARYVESFESRSNEIWLVFSYEGVSLSKLLYTVEDANNTAENERLEQVKQVRILRPSKWWRWLKTTEEGQEEMRNLIWQLLLALKSCHDRNITHRDIKPENMVICFEDPESGRCLKDAPTKVNNFSTKMRIIDFGSGIDEFTIKHLYASTGPSRAEQTYEYTPPEALLNATWYQGPSSSTLKYDMWSVGVVMLEMVLGTPNIFQINALTRALLDRHLEGWNEGVKELAYKLRSFMELCILIPGVSGSYSKKYHKVNQVGVSPASWKCSEEFFSRQIKARDPLKIGFSDIWALRLVRHLLMWDPEDRPSVDEALRHPYFQPPPRR