Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49455.t1 | XP_013470391.1 | 92.1 | 354 | 19 | 2 | 1 | 352 | 1 | 347 | 1.00E-182 | 649.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49455.t1 | Q9FIM0 | 27.0 | 215 | 137 | 6 | 6 | 217 | 6 | 203 | 1.1e-12 | 76.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49455.t1 | A0A072VR19 | 92.1 | 354 | 19 | 2 | 1 | 352 | 1 | 347 | 7.5e-183 | 649.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene49455.t1 | TF | MADS-M-type |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49455.t1 | MTR_1g114730 | 92.090 | 354 | 19 | 2 | 1 | 352 | 1 | 347 | 0.0 | 657 |
| MS.gene49455.t1 | MTR_6g018920 | 73.596 | 356 | 80 | 3 | 1 | 352 | 1 | 346 | 0.0 | 533 |
| MS.gene49455.t1 | MTR_6g005450 | 61.667 | 360 | 117 | 7 | 1 | 352 | 1 | 347 | 3.29e-142 | 413 |
| MS.gene49455.t1 | MTR_6g005440 | 56.742 | 356 | 109 | 6 | 1 | 352 | 1 | 315 | 1.88e-129 | 379 |
| MS.gene49455.t1 | MTR_4g107170 | 41.935 | 155 | 87 | 1 | 1 | 155 | 1 | 152 | 5.57e-35 | 132 |
| MS.gene49455.t1 | MTR_2g049610 | 43.590 | 156 | 82 | 2 | 1 | 156 | 1 | 150 | 9.49e-33 | 125 |
| MS.gene49455.t1 | MTR_4g045977 | 37.126 | 167 | 102 | 1 | 1 | 167 | 1 | 164 | 5.12e-30 | 121 |
| MS.gene49455.t1 | MTR_2g049630 | 37.017 | 181 | 109 | 2 | 2 | 181 | 4 | 180 | 3.14e-28 | 115 |
| MS.gene49455.t1 | MTR_2g049530 | 38.365 | 159 | 93 | 2 | 3 | 160 | 5 | 159 | 3.34e-28 | 111 |
| MS.gene49455.t1 | MTR_0061s0010 | 42.553 | 141 | 20 | 3 | 29 | 169 | 1 | 80 | 1.27e-21 | 91.3 |
| MS.gene49455.t1 | MTR_1g115290 | 29.371 | 143 | 100 | 1 | 44 | 186 | 8 | 149 | 8.18e-19 | 84.0 |
| MS.gene49455.t1 | MTR_5g075380 | 34.454 | 119 | 70 | 4 | 1 | 118 | 1 | 112 | 2.96e-15 | 73.9 |
| MS.gene49455.t1 | MTR_3g102570 | 33.945 | 109 | 64 | 3 | 1 | 109 | 1 | 101 | 6.22e-14 | 73.2 |
| MS.gene49455.t1 | MTR_3g031100 | 33.621 | 116 | 70 | 3 | 1 | 115 | 1 | 110 | 8.33e-14 | 71.6 |
| MS.gene49455.t1 | MTR_3g466980 | 23.478 | 230 | 151 | 8 | 1 | 214 | 1 | 221 | 8.61e-14 | 71.2 |
| MS.gene49455.t1 | MTR_4g032620 | 35.897 | 117 | 60 | 4 | 1 | 116 | 1 | 103 | 5.30e-13 | 68.9 |
| MS.gene49455.t1 | MTR_3g031240 | 30.172 | 116 | 74 | 3 | 1 | 115 | 1 | 110 | 7.27e-12 | 64.7 |
| MS.gene49455.t1 | MTR_8g086290 | 30.625 | 160 | 84 | 5 | 2 | 144 | 12 | 161 | 9.22e-12 | 64.3 |
| MS.gene49455.t1 | MTR_1g090710 | 25.949 | 158 | 103 | 5 | 1 | 150 | 1 | 152 | 9.33e-12 | 63.5 |
| MS.gene49455.t1 | MTR_3g466890 | 34.821 | 112 | 62 | 5 | 3 | 111 | 2 | 105 | 4.09e-11 | 62.0 |
| MS.gene49455.t1 | MTR_2g017865 | 28.025 | 157 | 98 | 4 | 1 | 154 | 16 | 160 | 4.24e-11 | 63.9 |
| MS.gene49455.t1 | MTR_2g016210 | 31.481 | 108 | 66 | 4 | 2 | 108 | 3 | 103 | 7.80e-11 | 62.8 |
| MS.gene49455.t1 | MTR_3g466830 | 30.909 | 110 | 69 | 3 | 3 | 111 | 2 | 105 | 7.85e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49455.t1 | AT5G55690 | 39.310 | 145 | 80 | 2 | 1 | 144 | 1 | 138 | 1.68e-24 | 103 |
| MS.gene49455.t1 | AT5G55690 | 39.310 | 145 | 80 | 2 | 1 | 144 | 1 | 138 | 1.68e-24 | 103 |
| MS.gene49455.t1 | AT5G58890 | 30.380 | 158 | 105 | 3 | 6 | 160 | 6 | 161 | 2.15e-17 | 83.2 |
| MS.gene49455.t1 | AT3G18650 | 29.240 | 171 | 107 | 5 | 16 | 180 | 31 | 193 | 1.35e-14 | 75.9 |
| MS.gene49455.t1 | AT1G22590 | 29.677 | 155 | 98 | 3 | 1 | 150 | 1 | 149 | 1.25e-13 | 69.3 |
| MS.gene49455.t1 | AT1G65330 | 33.333 | 111 | 67 | 4 | 3 | 112 | 2 | 106 | 1.53e-12 | 68.6 |
| MS.gene49455.t1 | AT2G28700 | 26.842 | 190 | 117 | 7 | 1 | 182 | 1 | 176 | 2.18e-12 | 68.6 |
| MS.gene49455.t1 | AT1G65300 | 33.036 | 112 | 66 | 4 | 3 | 112 | 2 | 106 | 2.32e-12 | 68.2 |
| MS.gene49455.t1 | AT3G05860 | 37.662 | 77 | 42 | 2 | 1 | 77 | 1 | 71 | 2.83e-12 | 66.2 |
| MS.gene49455.t1 | AT3G05860 | 37.662 | 77 | 42 | 2 | 1 | 77 | 1 | 71 | 4.42e-12 | 66.6 |
| MS.gene49455.t1 | AT3G05860 | 37.662 | 77 | 42 | 2 | 1 | 77 | 1 | 71 | 4.91e-12 | 66.6 |
| MS.gene49455.t1 | AT5G23260 | 27.329 | 161 | 100 | 4 | 1 | 157 | 1 | 148 | 9.96e-12 | 65.5 |
| MS.gene49455.t1 | AT5G26650 | 33.333 | 111 | 63 | 4 | 5 | 112 | 3 | 105 | 1.80e-11 | 66.2 |
| MS.gene49455.t1 | AT5G23260 | 26.901 | 171 | 97 | 5 | 1 | 157 | 17 | 173 | 8.55e-11 | 63.2 |
| MS.gene49455.t1 | AT5G27960 | 31.193 | 109 | 68 | 4 | 5 | 112 | 3 | 105 | 8.68e-11 | 63.5 |
Find 123 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTTTCCATATTGATTT+TGG | 0.055519 | 1.4:+87231421 | None:intergenic |
| CCACATGGATTTCAACTTAA+TGG | 0.122963 | 1.4:-87231281 | MS.gene49455:CDS |
| TTGTCTTTAGGCCATGTTTC+AGG | 0.191776 | 1.4:+87232085 | None:intergenic |
| ACCAGAGCTATATCCTTAAT+TGG | 0.197552 | 1.4:-87229613 | MS.gene49455:CDS |
| TTGATGTTAATGGGGCTAAT+TGG | 0.199081 | 1.4:-87231508 | MS.gene49455:CDS |
| CGAAAGTTCCTTCCCAATTA+AGG | 0.202646 | 1.4:+87229600 | None:intergenic |
| AAATCCACGACCTACAAAAT+TGG | 0.234450 | 1.4:+87232114 | None:intergenic |
| TACAAGAATATTGATGTTAA+TGG | 0.237026 | 1.4:-87231518 | MS.gene49455:CDS |
| GCATTTCCATTGTAATAGTA+TGG | 0.257144 | 1.4:+87231368 | None:intergenic |
| ACTTCCGTGATTTCTCCTTT+TGG | 0.266267 | 1.4:+87232230 | None:intergenic |
| TTTATCTGATTCACAAAATC+TGG | 0.275892 | 1.4:-87229453 | MS.gene49455:CDS |
| TACTGCTACGCAACAAGTTC+TGG | 0.294127 | 1.4:+87230158 | None:intergenic |
| ACAAGAATATTGATGTTAAT+GGG | 0.303821 | 1.4:-87231517 | MS.gene49455:CDS |
| AACAAGAGGATATGTCTATC+TGG | 0.312544 | 1.4:-87230096 | MS.gene49455:CDS |
| GGTTATCAGGACCGATGCTT+CGG | 0.326389 | 1.4:-87231449 | MS.gene49455:CDS |
| GATATTATTTGCTAGCAAAC+TGG | 0.357133 | 1.4:-87231864 | MS.gene49455:CDS |
| AATGAATCTTTCAATTCTCT+TGG | 0.359377 | 1.4:-87231899 | MS.gene49455:CDS |
| GGGTCGTGGAAGAATATCTA+TGG | 0.367126 | 1.4:-87232260 | MS.gene49455:CDS |
| TGATGTTAATGGGGCTAATT+GGG | 0.367522 | 1.4:-87231507 | MS.gene49455:CDS |
| ATTAACATCAATATTCTTGT+AGG | 0.368101 | 1.4:+87231520 | None:intergenic |
| TGGGGCTAATTGGGCCAATC+AGG | 0.372470 | 1.4:-87231498 | MS.gene49455:CDS |
| AATGTTAATGATACCTATAA+TGG | 0.373254 | 1.4:-87231473 | MS.gene49455:CDS |
| TCTTGAACATCATAGATCTT+AGG | 0.373714 | 1.4:+87232007 | None:intergenic |
| ATGTTAATGATACCTATAAT+GGG | 0.375349 | 1.4:-87231472 | MS.gene49455:CDS |
| ATCATTAACATTAACCTGAT+TGG | 0.375551 | 1.4:+87231484 | None:intergenic |
| ATGGTGCGAGCTTTGTATAT+TGG | 0.377737 | 1.4:+87231580 | None:intergenic |
| CGGGCTTCCCAAAATCAATA+TGG | 0.380849 | 1.4:-87231429 | MS.gene49455:CDS |
| GTTATCAGGACCGATGCTTC+GGG | 0.385864 | 1.4:-87231448 | MS.gene49455:CDS |
| GGGAAAGTGTGCAAGGCAAT+AGG | 0.393610 | 1.4:+87231326 | None:intergenic |
| GATTTGAGAGATTCTGAAAA+GGG | 0.398612 | 1.4:+87231306 | None:intergenic |
| CACTCTTAAATTCAAATCGT+TGG | 0.404114 | 1.4:-87229508 | MS.gene49455:CDS |
| CTTGGGAATCTCACCTTAAG+AGG | 0.415136 | 1.4:+87230217 | None:intergenic |
| TATGCTAAAAGAAGATCATA+AGG | 0.417664 | 1.4:-87231807 | MS.gene49455:CDS |
| GGTGTCTGCTACCCCTCTTA+AGG | 0.424800 | 1.4:-87230230 | MS.gene49455:CDS |
| TTTCCAAGTGTCCACTCAAA+AGG | 0.425572 | 1.4:-87230191 | MS.gene49455:CDS |
| AAGGAAGGATGGAGCTGAAA+AGG | 0.426747 | 1.4:-87231405 | MS.gene49455:CDS |
| TTATCACTAATATTCATCAT+TGG | 0.435936 | 1.4:+87231665 | None:intergenic |
| AACATCAACATCACAAAGAA+TGG | 0.436469 | 1.4:+87232156 | None:intergenic |
| ATCCATTCCATTACTGTTGG+AGG | 0.440584 | 1.4:-87230119 | MS.gene49455:CDS |
| AGTTTACGAAGGCGAGCCTT+TGG | 0.446961 | 1.4:-87229531 | MS.gene49455:CDS |
| ACTATAACACAACAAATGAT+AGG | 0.448494 | 1.4:-87232033 | MS.gene49455:CDS |
| ACTTTCGTGAAGGCTTTGTC+AGG | 0.454167 | 1.4:-87229584 | MS.gene49455:CDS |
| TTAACATCAATATTCTTGTA+GGG | 0.460944 | 1.4:+87231521 | None:intergenic |
| CCCAATTAAGGATATAGCTC+TGG | 0.466933 | 1.4:+87229612 | None:intergenic |
| GTGGACACTTGGAAAAGTCT+TGG | 0.468552 | 1.4:+87230199 | None:intergenic |
| AATCCACGACCTACAAAATT+GGG | 0.470390 | 1.4:+87232115 | None:intergenic |
| CCAGAGCTATATCCTTAATT+GGG | 0.471724 | 1.4:-87229612 | MS.gene49455:CDS |
| TCTATCCATTCCATTACTGT+TGG | 0.473770 | 1.4:-87230122 | MS.gene49455:CDS |
| GGAAAGTGTGCAAGGCAATA+GGG | 0.475843 | 1.4:+87231327 | None:intergenic |
| AGATTTGAGAGATTCTGAAA+AGG | 0.476219 | 1.4:+87231305 | None:intergenic |
| TAGTTTCTCTTTACGCACTT+TGG | 0.478267 | 1.4:+87231943 | None:intergenic |
| CAAGCTCATATGTTCATGAA+TGG | 0.478657 | 1.4:-87231236 | MS.gene49455:CDS |
| ATCTATGGAACTCATCCAAA+AGG | 0.478947 | 1.4:-87232245 | MS.gene49455:CDS |
| GAAGTAGTAACTAGGATTCA+AGG | 0.479038 | 1.4:+87231730 | None:intergenic |
| GAAGGTTGAGAGCTTTGTCC+CGG | 0.483719 | 1.4:+87231614 | None:intergenic |
| AATCGTTGGTTGCAAGAGAC+GGG | 0.487795 | 1.4:-87229494 | MS.gene49455:CDS |
| TTGAAAGATTCATTCCAAGT+TGG | 0.490806 | 1.4:+87231908 | None:intergenic |
| TGGACACTTGGAAAAGTCTT+GGG | 0.493815 | 1.4:+87230200 | None:intergenic |
| TCACTAATATTCATCATTGG+AGG | 0.494747 | 1.4:+87231668 | None:intergenic |
| ATCAATATGGAAAGGAAGGA+TGG | 0.505258 | 1.4:-87231416 | MS.gene49455:CDS |
| CAAAATCAATATGGAAAGGA+AGG | 0.508161 | 1.4:-87231420 | MS.gene49455:CDS |
| GTTCAGAACTATGCAGAGAA+TGG | 0.514794 | 1.4:-87229641 | MS.gene49455:CDS |
| GTCAACATTTCAAAAGAGAA+AGG | 0.514992 | 1.4:-87232209 | MS.gene49455:CDS |
| TTGAAGTGGCCAAAACCCTA+AGG | 0.517435 | 1.4:+87231637 | None:intergenic |
| AAATCGTTGGTTGCAAGAGA+CGG | 0.520320 | 1.4:-87229495 | MS.gene49455:CDS |
| GTTTAAATAACTTAACATAG+AGG | 0.522103 | 1.4:+87229389 | None:intergenic |
| TCTTGTTCCTCCAACAGTAA+TGG | 0.528355 | 1.4:+87230112 | None:intergenic |
| ACAAGAGGATATGTCTATCT+GGG | 0.536876 | 1.4:-87230095 | MS.gene49455:CDS |
| CTCATATGTTCATGAATGGA+AGG | 0.537554 | 1.4:-87231232 | MS.gene49455:CDS |
| GCTTTGTCAGGATGGAATCA+TGG | 0.537985 | 1.4:-87229572 | MS.gene49455:CDS |
| TTTGAATTTAAGAGTGCCAA+AGG | 0.538951 | 1.4:+87229515 | None:intergenic |
| TCGTCACCATACTATTACAA+TGG | 0.539170 | 1.4:-87231374 | MS.gene49455:CDS |
| TTCCTCCAACAGTAATGGAA+TGG | 0.542058 | 1.4:+87230117 | None:intergenic |
| TCGTGAAGGCTTTGTCAGGA+TGG | 0.545692 | 1.4:-87229580 | MS.gene49455:CDS |
| TAAAGATGATGTATCCAACT+TGG | 0.548629 | 1.4:-87231922 | MS.gene49455:CDS |
| ATCTTTCAATTCTCTTGGAG+CGG | 0.552140 | 1.4:-87231894 | MS.gene49455:CDS |
| ACTTAATGGATTCAATGCTA+AGG | 0.552446 | 1.4:-87231267 | MS.gene49455:CDS |
| GGATATGTCTATCTGGGATG+AGG | 0.552655 | 1.4:-87230089 | MS.gene49455:CDS |
| ATATTGGAAATCAAAGAAGA+AGG | 0.553651 | 1.4:+87231596 | None:intergenic |
| ATAGAGGATCCACTGAAGAA+AGG | 0.556083 | 1.4:+87229405 | None:intergenic |
| ATGCTAAAAGAAGATCATAA+GGG | 0.556585 | 1.4:-87231806 | MS.gene49455:CDS |
| AGCTATATCCTTAATTGGGA+AGG | 0.558189 | 1.4:-87229608 | MS.gene49455:CDS |
| ACATTTCAAAAGAGAAAGGA+AGG | 0.560555 | 1.4:-87232205 | MS.gene49455:CDS |
| GAGCTTTGTCCCGGTTGAAG+TGG | 0.560628 | 1.4:+87231623 | None:intergenic |
| GTACAGACAAGTGGGAAGAG+TGG | 0.561546 | 1.4:-87229669 | MS.gene49455:intron |
| GGAAGCTGACCTTTCTTCAG+TGG | 0.563480 | 1.4:-87229414 | MS.gene49455:CDS |
| ATCTGATTCACAAAATCTGG+TGG | 0.563557 | 1.4:-87229450 | MS.gene49455:CDS |
| ATGAGATTGAAGTAGTAACT+AGG | 0.569090 | 1.4:+87231722 | None:intergenic |
| ATTACTGTTGGAGGAACAAG+AGG | 0.569445 | 1.4:-87230110 | MS.gene49455:CDS |
| TTGGGAATCTCACCTTAAGA+GGG | 0.571012 | 1.4:+87230218 | None:intergenic |
| TGAAGTGGCCAAAACCCTAA+GGG | 0.571128 | 1.4:+87231638 | None:intergenic |
| TATTCGTAGAAAATGGGTCG+TGG | 0.573273 | 1.4:-87232274 | None:intergenic |
| TTCCCAAAATCAATATGGAA+AGG | 0.576621 | 1.4:-87231424 | MS.gene49455:CDS |
| CTCGCACCATGTGGAGTCTG+AGG | 0.578924 | 1.4:-87231567 | MS.gene49455:CDS |
| TCTGGTGGAAGTATACATAG+TGG | 0.582033 | 1.4:-87229435 | MS.gene49455:CDS |
| TGTTAATGATACCTATAATG+GGG | 0.582350 | 1.4:-87231471 | MS.gene49455:CDS |
| TTTGATTTAGTACAGACAAG+TGG | 0.584431 | 1.4:-87229678 | MS.gene49455:intron |
| TTGATTTAGTACAGACAAGT+GGG | 0.588076 | 1.4:-87229677 | MS.gene49455:intron |
| CACCATGTGGAGTCTGAGGA+GGG | 0.590680 | 1.4:-87231563 | MS.gene49455:CDS |
| TAACATCAATATTCTTGTAG+GGG | 0.591713 | 1.4:+87231522 | None:intergenic |
| TCATCCAAAAGGAGAAATCA+CGG | 0.593512 | 1.4:-87232234 | MS.gene49455:CDS |
| CTGAAAAGGGAAAGTGTGCA+AGG | 0.597692 | 1.4:+87231319 | None:intergenic |
| ATATGTTTGTGCTTGAGACA+TGG | 0.597890 | 1.4:+87231691 | None:intergenic |
| ATCTGGGATGAGGAGATGCA+TGG | 0.603930 | 1.4:-87230079 | MS.gene49455:CDS |
| CAAGAATATTGATGTTAATG+GGG | 0.607609 | 1.4:-87231516 | MS.gene49455:CDS |
| CTATTACAATGGAAATGCAA+TGG | 0.613734 | 1.4:-87231363 | MS.gene49455:CDS |
| GCACCATGTGGAGTCTGAGG+AGG | 0.614956 | 1.4:-87231564 | MS.gene49455:CDS |
| TACCCTCCTCAGACTCCACA+TGG | 0.630866 | 1.4:+87231561 | None:intergenic |
| TTGGGAAGGAACTTTCGTGA+AGG | 0.633057 | 1.4:-87229594 | MS.gene49455:CDS |
| GATTTGCTGAACCTGAAACA+TGG | 0.641427 | 1.4:-87232096 | MS.gene49455:CDS |
| GAAGTGGCCAAAACCCTAAG+GGG | 0.646061 | 1.4:+87231639 | None:intergenic |
| TAGTAACTAGGATTCAAGGA+AGG | 0.647567 | 1.4:+87231734 | None:intergenic |
| GTTAATGATACCTATAATGG+GGG | 0.651079 | 1.4:-87231470 | MS.gene49455:CDS |
| AGAGGGGTAGCAGACACCCA+AGG | 0.659168 | 1.4:+87230235 | None:intergenic |
| AATCTCTCAAATCTACCACA+TGG | 0.661283 | 1.4:-87231296 | MS.gene49455:CDS |
| CAGACAAGTGGGAAGAGTGG+AGG | 0.663115 | 1.4:-87229666 | MS.gene49455:CDS |
| TATACAAAGCTCGCACCATG+TGG | 0.663687 | 1.4:-87231576 | MS.gene49455:CDS |
| ATGGAATCATGGAAATCGAG+CGG | 0.667260 | 1.4:-87229561 | MS.gene49455:CDS |
| GCGGAGATTCTAGTTTACGA+AGG | 0.667663 | 1.4:-87229542 | MS.gene49455:CDS |
| TGGGAATCTCACCTTAAGAG+GGG | 0.696658 | 1.4:+87230219 | None:intergenic |
| AATAGCTCATGAATCACACA+AGG | 0.705760 | 1.4:-87231777 | MS.gene49455:CDS |
| ATGGCCTAAAGACAAAAGAG+AGG | 0.713382 | 1.4:-87232077 | MS.gene49455:CDS |
| CCATTAAGTTGAAATCCATG+TGG | 0.755933 | 1.4:+87231281 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAATTATTGTACTTT+CGG | + | chr1.4:87231716-87231735 | None:intergenic | 10.0% |
| !! | ATAAACTTGAAAATACAAAT+AGG | - | chr1.4:87231206-87231225 | MS.gene49455:intron | 15.0% |
| !! | TAATACTAATATATAGATGA+GGG | - | chr1.4:87230751-87230770 | MS.gene49455:intron | 15.0% |
| !! | TTTCTTAATTACAAGTAATT+TGG | - | chr1.4:87231242-87231261 | MS.gene49455:CDS | 15.0% |
| !! | TTTGTTTCATAACATAAAAA+AGG | + | chr1.4:87230788-87230807 | None:intergenic | 15.0% |
| !!! | ATTTTGAAGAAATTAATGAT+AGG | - | chr1.4:87230860-87230879 | MS.gene49455:intron | 15.0% |
| !!! | GAAAGTACAATAATTTAATT+TGG | - | chr1.4:87231715-87231734 | MS.gene49455:CDS | 15.0% |
| !!! | TTAACAAAAATTTCTTTTCT+TGG | - | chr1.4:87230563-87230582 | MS.gene49455:intron | 15.0% |
| !!! | TTTTGAAGAAATTAATGATA+GGG | - | chr1.4:87230861-87230880 | MS.gene49455:intron | 15.0% |
| !! | AACTATGGATATTTCTTATT+AGG | + | chr1.4:87231280-87231299 | None:intergenic | 20.0% |
| !! | AATATGACAAACTAAAATGT+TGG | + | chr1.4:87230968-87230987 | None:intergenic | 20.0% |
| !! | AATGTTAATGATACCTATAA+TGG | - | chr1.4:87230189-87230208 | MS.gene49455:CDS | 20.0% |
| !! | ACAAGAATATTGATGTTAAT+GGG | - | chr1.4:87230145-87230164 | MS.gene49455:CDS | 20.0% |
| !! | AGTGACAATATTAATATTCA+TGG | - | chr1.4:87231307-87231326 | MS.gene49455:CDS | 20.0% |
| !! | ATGTTAATGATACCTATAAT+GGG | - | chr1.4:87230190-87230209 | MS.gene49455:CDS | 20.0% |
| !! | ATTAACATCAATATTCTTGT+AGG | + | chr1.4:87230145-87230164 | None:intergenic | 20.0% |
| !! | CATAACTAAGTTATTATTCT+AGG | + | chr1.4:87231186-87231205 | None:intergenic | 20.0% |
| !! | CTAATACTAATATATAGATG+AGG | - | chr1.4:87230750-87230769 | MS.gene49455:intron | 20.0% |
| !! | TACAAGAATATTGATGTTAA+TGG | - | chr1.4:87230144-87230163 | MS.gene49455:CDS | 20.0% |
| !! | TTAACATCAATATTCTTGTA+GGG | + | chr1.4:87230144-87230163 | None:intergenic | 20.0% |
| !! | TTATCACTAATATTCATCAT+TGG | + | chr1.4:87230000-87230019 | None:intergenic | 20.0% |
| !!! | AGTTATTATTCTAGGATTTA+AGG | + | chr1.4:87231178-87231197 | None:intergenic | 20.0% |
| !!! | CACTGATGTAATTTTTATAT+TGG | - | chr1.4:87230812-87230831 | MS.gene49455:intron | 20.0% |
| ! | AATGAATCTTTCAATTCTCT+TGG | - | chr1.4:87229763-87229782 | MS.gene49455:intron | 25.0% |
| ! | ACTATAACACAACAAATGAT+AGG | - | chr1.4:87229629-87229648 | MS.gene49455:CDS | 25.0% |
| ! | ATATTGGAAATCAAAGAAGA+AGG | + | chr1.4:87230069-87230088 | None:intergenic | 25.0% |
| ! | ATCATTAACATTAACCTGAT+TGG | + | chr1.4:87230181-87230200 | None:intergenic | 25.0% |
| ! | ATGCTAAAAGAAGATCATAA+GGG | - | chr1.4:87229856-87229875 | MS.gene49455:intron | 25.0% |
| ! | ATGGATATTTCTTATTAGGT+AGG | + | chr1.4:87231276-87231295 | None:intergenic | 25.0% |
| ! | CAAGAATATTGATGTTAATG+GGG | - | chr1.4:87230146-87230165 | MS.gene49455:CDS | 25.0% |
| ! | GGTGCTTATTATATATTTCT+GGG | - | chr1.4:87230609-87230628 | MS.gene49455:intron | 25.0% |
| ! | TAACATCAATATTCTTGTAG+GGG | + | chr1.4:87230143-87230162 | None:intergenic | 25.0% |
| ! | TATGCTAAAAGAAGATCATA+AGG | - | chr1.4:87229855-87229874 | MS.gene49455:intron | 25.0% |
| ! | TCTGTACTAAATCAAAAATC+TGG | + | chr1.4:87231980-87231999 | None:intergenic | 25.0% |
| ! | TGGATATTTCTTATTAGGTA+GGG | + | chr1.4:87231275-87231294 | None:intergenic | 25.0% |
| ! | TGGTGCTTATTATATATTTC+TGG | - | chr1.4:87230608-87230627 | MS.gene49455:intron | 25.0% |
| ! | TGTTAATGATACCTATAATG+GGG | - | chr1.4:87230191-87230210 | MS.gene49455:CDS | 25.0% |
| ! | TTAAATTATTGTACTTTCGG+AGG | + | chr1.4:87231713-87231732 | None:intergenic | 25.0% |
| ! | TTGATCATCAAGAAAATGAT+TGG | - | chr1.4:87231818-87231837 | MS.gene49455:CDS | 25.0% |
| ! | TTTATCTGATTCACAAAATC+TGG | - | chr1.4:87232209-87232228 | MS.gene49455:CDS | 25.0% |
| !! | ATTTTTCACTGAGTATTACT+AGG | - | chr1.4:87231369-87231388 | MS.gene49455:CDS | 25.0% |
| !! | TTGTCACTTCAAAATAACTA+TGG | + | chr1.4:87231295-87231314 | None:intergenic | 25.0% |
| !! | TTGTGTTATAGTACTTTTGA+AGG | + | chr1.4:87229621-87229640 | None:intergenic | 25.0% |
| !!! | TGATGTTCAAGAGTATTTTA+AGG | - | chr1.4:87229666-87229685 | MS.gene49455:CDS | 25.0% |
| !!! | TTCAAGAGTATTTTAAGGAA+AGG | - | chr1.4:87229671-87229690 | MS.gene49455:intron | 25.0% |
| !!! | TTCCTTTCCATATTGATTTT+GGG | + | chr1.4:87230243-87230262 | None:intergenic | 25.0% |
| AACATCAACATCACAAAGAA+TGG | + | chr1.4:87229509-87229528 | None:intergenic | 30.0% | |
| AATTTCGTCGGAAATAGAAA+AGG | - | chr1.4:87231031-87231050 | MS.gene49455:intron | 30.0% | |
| ACAAAATGGATCAACATTAG+TGG | + | chr1.4:87231863-87231882 | None:intergenic | 30.0% | |
| ACATTTCAAAAGAGAAAGGA+AGG | - | chr1.4:87229457-87229476 | MS.gene49455:CDS | 30.0% | |
| AGAAATTAATGATAGGGAGA+TGG | - | chr1.4:87230867-87230886 | MS.gene49455:intron | 30.0% | |
| AGATAAGGACTACCAATATA+TGG | + | chr1.4:87231155-87231174 | None:intergenic | 30.0% | |
| ATAAACTTCCTCAATTTCGT+CGG | - | chr1.4:87231019-87231038 | MS.gene49455:intron | 30.0% | |
| ATCAGATAAAAATATAGCGC+TGG | + | chr1.4:87232199-87232218 | None:intergenic | 30.0% | |
| ATGAGATTGAAGTAGTAACT+AGG | + | chr1.4:87229943-87229962 | None:intergenic | 30.0% | |
| ATTAGTGATAAAAACCCCTT+AGG | - | chr1.4:87230009-87230028 | MS.gene49455:intron | 30.0% | |
| CAAAATCAATATGGAAAGGA+AGG | - | chr1.4:87230242-87230261 | MS.gene49455:CDS | 30.0% | |
| CACTCTTAAATTCAAATCGT+TGG | - | chr1.4:87232154-87232173 | MS.gene49455:CDS | 30.0% | |
| CTATTACAATGGAAATGCAA+TGG | - | chr1.4:87230299-87230318 | MS.gene49455:intron | 30.0% | |
| GCATTTCCATTGTAATAGTA+TGG | + | chr1.4:87230297-87230316 | None:intergenic | 30.0% | |
| GTCAACATTTCAAAAGAGAA+AGG | - | chr1.4:87229453-87229472 | MS.gene49455:CDS | 30.0% | |
| GTTAATGATACCTATAATGG+GGG | - | chr1.4:87230192-87230211 | MS.gene49455:CDS | 30.0% | |
| TAAAGATGATGTATCCAACT+TGG | - | chr1.4:87229740-87229759 | MS.gene49455:intron | 30.0% | |
| TCACTAATATTCATCATTGG+AGG | + | chr1.4:87229997-87230016 | None:intergenic | 30.0% | |
| TCTTGAACATCATAGATCTT+AGG | + | chr1.4:87229658-87229677 | None:intergenic | 30.0% | |
| TTAGTGATAAAAACCCCTTA+GGG | - | chr1.4:87230010-87230029 | MS.gene49455:intron | 30.0% | |
| TTCCCAAAATCAATATGGAA+AGG | - | chr1.4:87230238-87230257 | MS.gene49455:CDS | 30.0% | |
| TTGAAAGATTCATTCCAAGT+TGG | + | chr1.4:87229757-87229776 | None:intergenic | 30.0% | |
| TTGATTTAGTACAGACAAGT+GGG | - | chr1.4:87231985-87232004 | MS.gene49455:CDS | 30.0% | |
| TTTAAGTCGAACAAATAGCT+TGG | - | chr1.4:87230588-87230607 | MS.gene49455:intron | 30.0% | |
| TTTCTTATTAGGTAGGGTAA+AGG | + | chr1.4:87231269-87231288 | None:intergenic | 30.0% | |
| ! | AGATTTGAGAGATTCTGAAA+AGG | + | chr1.4:87230360-87230379 | None:intergenic | 30.0% |
| ! | GATATTATTTGCTAGCAAAC+TGG | - | chr1.4:87229798-87229817 | MS.gene49455:intron | 30.0% |
| ! | GATTTGAGAGATTCTGAAAA+GGG | + | chr1.4:87230359-87230378 | None:intergenic | 30.0% |
| ! | TTTGATTTAGTACAGACAAG+TGG | - | chr1.4:87231984-87232003 | MS.gene49455:CDS | 30.0% |
| !! | ACTTAATGGATTCAATGCTA+AGG | - | chr1.4:87230395-87230414 | MS.gene49455:intron | 30.0% |
| !! | TTCTAGGATTTAAGGAGATA+AGG | + | chr1.4:87231170-87231189 | None:intergenic | 30.0% |
| !! | TTTGAATTTAAGAGTGCCAA+AGG | + | chr1.4:87232150-87232169 | None:intergenic | 30.0% |
| !!! | CTTCCTTTCCATATTGATTT+TGG | + | chr1.4:87230244-87230263 | None:intergenic | 30.0% |
| AAATCCACGACCTACAAAAT+TGG | + | chr1.4:87229551-87229570 | None:intergenic | 35.0% | |
| AACAAGAGGATATGTCTATC+TGG | - | chr1.4:87231566-87231585 | MS.gene49455:CDS | 35.0% | |
| AAGGACTACCAATATATGGT+TGG | + | chr1.4:87231151-87231170 | None:intergenic | 35.0% | |
| AATAGCTCATGAATCACACA+AGG | - | chr1.4:87229885-87229904 | MS.gene49455:intron | 35.0% | |
| AATCCACGACCTACAAAATT+GGG | + | chr1.4:87229550-87229569 | None:intergenic | 35.0% | |
| AATCTCTCAAATCTACCACA+TGG | - | chr1.4:87230366-87230385 | MS.gene49455:intron | 35.0% | |
| AATTAATGATAGGGAGATGG+TGG | - | chr1.4:87230870-87230889 | MS.gene49455:intron | 35.0% | |
| ACAAGAGGATATGTCTATCT+GGG | - | chr1.4:87231567-87231586 | MS.gene49455:CDS | 35.0% | |
| ACCAGAGCTATATCCTTAAT+TGG | - | chr1.4:87232049-87232068 | MS.gene49455:CDS | 35.0% | |
| AGCTATATCCTTAATTGGGA+AGG | - | chr1.4:87232054-87232073 | MS.gene49455:CDS | 35.0% | |
| ATATGTTTGTGCTTGAGACA+TGG | + | chr1.4:87229974-87229993 | None:intergenic | 35.0% | |
| ATCAATATGGAAAGGAAGGA+TGG | - | chr1.4:87230246-87230265 | MS.gene49455:intron | 35.0% | |
| ATCTATGGAACTCATCCAAA+AGG | - | chr1.4:87229417-87229436 | MS.gene49455:CDS | 35.0% | |
| ATCTGATTCACAAAATCTGG+TGG | - | chr1.4:87232212-87232231 | MS.gene49455:CDS | 35.0% | |
| ATCTTTCAATTCTCTTGGAG+CGG | - | chr1.4:87229768-87229787 | MS.gene49455:intron | 35.0% | |
| CAAGCTCATATGTTCATGAA+TGG | - | chr1.4:87230426-87230445 | MS.gene49455:intron | 35.0% | |
| CATTCGAACCAACCATATAT+TGG | - | chr1.4:87231140-87231159 | MS.gene49455:intron | 35.0% | |
| CCACATGGATTTCAACTTAA+TGG | - | chr1.4:87230381-87230400 | MS.gene49455:intron | 35.0% | |
| CCAGAGCTATATCCTTAATT+GGG | - | chr1.4:87232050-87232069 | MS.gene49455:CDS | 35.0% | |
| CTCATATGTTCATGAATGGA+AGG | - | chr1.4:87230430-87230449 | MS.gene49455:intron | 35.0% | |
| GAAGTAGTAACTAGGATTCA+AGG | + | chr1.4:87229935-87229954 | None:intergenic | 35.0% | |
| GCATAACACTTTGAACTTTC+AGG | - | chr1.4:87230460-87230479 | MS.gene49455:intron | 35.0% | |
| TAGGTAGGTTAAGAATGTGA+GGG | - | chr1.4:87231388-87231407 | MS.gene49455:CDS | 35.0% | |
| TAGTAACTAGGATTCAAGGA+AGG | + | chr1.4:87229931-87229950 | None:intergenic | 35.0% | |
| TAGTTTCTCTTTACGCACTT+TGG | + | chr1.4:87229722-87229741 | None:intergenic | 35.0% | |
| TATTCGTTCGGGATATAAAC+TGG | - | chr1.4:87231615-87231634 | MS.gene49455:CDS | 35.0% | |
| TCATCCAAAAGGAGAAATCA+CGG | - | chr1.4:87229428-87229447 | MS.gene49455:CDS | 35.0% | |
| TCGTCACCATACTATTACAA+TGG | - | chr1.4:87230288-87230307 | MS.gene49455:intron | 35.0% | |
| TCTATCCATTCCATTACTGT+TGG | - | chr1.4:87231540-87231559 | MS.gene49455:CDS | 35.0% | |
| TGATGTTAATGGGGCTAATT+GGG | - | chr1.4:87230155-87230174 | MS.gene49455:CDS | 35.0% | |
| TGGAAAGTAGACTATTCGTT+CGG | - | chr1.4:87231603-87231622 | MS.gene49455:CDS | 35.0% | |
| TTCACTGAGTATTACTAGGT+AGG | - | chr1.4:87231373-87231392 | MS.gene49455:CDS | 35.0% | |
| TTCTATTTCCGACGAAATTG+AGG | + | chr1.4:87231030-87231049 | None:intergenic | 35.0% | |
| TTGATGTTAATGGGGCTAAT+TGG | - | chr1.4:87230154-87230173 | MS.gene49455:CDS | 35.0% | |
| ! | AAGAATGTGAGGGACTTTTT+AGG | - | chr1.4:87231398-87231417 | MS.gene49455:CDS | 35.0% |
| ! | ATAAAAACCCCTTAGGGTTT+TGG | - | chr1.4:87230016-87230035 | MS.gene49455:intron | 35.0% |
| ! | CTGAGAGACAATTTGTTCAA+GGG | - | chr1.4:87231659-87231678 | MS.gene49455:CDS | 35.0% |
| ! | GATTTTTGCTTCCTTTTGAG+TGG | + | chr1.4:87231485-87231504 | None:intergenic | 35.0% |
| ! | TGTACCTCTCTTTTGTCTTT+AGG | + | chr1.4:87229592-87229611 | None:intergenic | 35.0% |
| ! | TTTTTCTTTTACGCGAGAGT+TGG | - | chr1.4:87231076-87231095 | MS.gene49455:intron | 35.0% |
| !! | CAATATATGGTTGGTTCGAA+TGG | + | chr1.4:87231142-87231161 | None:intergenic | 35.0% |
| !! | CCATTAAGTTGAAATCCATG+TGG | + | chr1.4:87230384-87230403 | None:intergenic | 35.0% |
| !!! | ACTTTTTAGGTGTGATCCTT+GGG | - | chr1.4:87231411-87231430 | MS.gene49455:CDS | 35.0% |
| AGGAATTAGTTCACCGCTAT+TGG | + | chr1.4:87231117-87231136 | None:intergenic | 40.0% | |
| ATAGAGGATCCACTGAAGAA+AGG | + | chr1.4:87232260-87232279 | None:intergenic | 40.0% | |
| ATCCATTCCATTACTGTTGG+AGG | - | chr1.4:87231543-87231562 | MS.gene49455:CDS | 40.0% | |
| ATGGAATCATGGAAATCGAG+CGG | - | chr1.4:87232101-87232120 | MS.gene49455:CDS | 40.0% | |
| ATGGCCTAAAGACAAAAGAG+AGG | - | chr1.4:87229585-87229604 | MS.gene49455:CDS | 40.0% | |
| ATTACTGTTGGAGGAACAAG+AGG | - | chr1.4:87231552-87231571 | MS.gene49455:CDS | 40.0% | |
| CCCAATTAAGGATATAGCTC+TGG | + | chr1.4:87232053-87232072 | None:intergenic | 40.0% | |
| CGAAAGTTCCTTCCCAATTA+AGG | + | chr1.4:87232065-87232084 | None:intergenic | 40.0% | |
| CTAGGTAGGTTAAGAATGTG+AGG | - | chr1.4:87231387-87231406 | MS.gene49455:CDS | 40.0% | |
| GGAAAGTAGACTATTCGTTC+GGG | - | chr1.4:87231604-87231623 | MS.gene49455:CDS | 40.0% | |
| GTTCAGAACTATGCAGAGAA+TGG | - | chr1.4:87232021-87232040 | MS.gene49455:CDS | 40.0% | |
| GTTCAGCGGTTTAATTCTGT+GGG | - | chr1.4:87231891-87231910 | MS.gene49455:CDS | 40.0% | |
| TCAAGGGATGGTACAGTATT+TGG | - | chr1.4:87231675-87231694 | MS.gene49455:CDS | 40.0% | |
| TCTTGTTCCTCCAACAGTAA+TGG | + | chr1.4:87231553-87231572 | None:intergenic | 40.0% | |
| TGGACACTTGGAAAAGTCTT+GGG | + | chr1.4:87231465-87231484 | None:intergenic | 40.0% | |
| TTGGGAATCTCACCTTAAGA+GGG | + | chr1.4:87231447-87231466 | None:intergenic | 40.0% | |
| TTGTCTTTAGGCCATGTTTC+AGG | + | chr1.4:87229580-87229599 | None:intergenic | 40.0% | |
| TTTCCAAGTGTCCACTCAAA+AGG | - | chr1.4:87231471-87231490 | MS.gene49455:CDS | 40.0% | |
| ! | AAATCGTTGGTTGCAAGAGA+CGG | - | chr1.4:87232167-87232186 | MS.gene49455:CDS | 40.0% |
| ! | ACTTCCGTGATTTCTCCTTT+TGG | + | chr1.4:87229435-87229454 | None:intergenic | 40.0% |
| ! | ATGGTGCGAGCTTTGTATAT+TGG | + | chr1.4:87230085-87230104 | None:intergenic | 40.0% |
| ! | CTCTATGCTCCCAATTTTGT+AGG | - | chr1.4:87229538-87229557 | MS.gene49455:CDS | 40.0% |
| ! | GAGACAATTTGTTCAAGGGA+TGG | - | chr1.4:87231663-87231682 | MS.gene49455:CDS | 40.0% |
| ! | GCTGAGAGACAATTTGTTCA+AGG | - | chr1.4:87231658-87231677 | MS.gene49455:CDS | 40.0% |
| ! | GTTGATCCATTTTGTAGTCC+CGG | - | chr1.4:87231868-87231887 | MS.gene49455:CDS | 40.0% |
| ! | TACCTATAATGGGGGTTATC+AGG | - | chr1.4:87230200-87230219 | MS.gene49455:CDS | 40.0% |
| ! | TCTGGTGGAAGTATACATAG+TGG | - | chr1.4:87232227-87232246 | MS.gene49455:CDS | 40.0% |
| ! | TTCCTCCAACAGTAATGGAA+TGG | + | chr1.4:87231548-87231567 | None:intergenic | 40.0% |
| ! | TTGATCCATTTTGTAGTCCC+GGG | - | chr1.4:87231869-87231888 | MS.gene49455:CDS | 40.0% |
| !! | GATTTGCTGAACCTGAAACA+TGG | - | chr1.4:87229566-87229585 | MS.gene49455:CDS | 40.0% |
| !! | TATGGTTGGTTCGAATGGTA+AGG | + | chr1.4:87231137-87231156 | None:intergenic | 40.0% |
| !!! | GACTTTTTAGGTGTGATCCT+TGG | - | chr1.4:87231410-87231429 | MS.gene49455:CDS | 40.0% |
| AAGGAAGGATGGAGCTGAAA+AGG | - | chr1.4:87230257-87230276 | MS.gene49455:intron | 45.0% | |
| AGAATTAAACCGCTGAACCC+GGG | + | chr1.4:87231889-87231908 | None:intergenic | 45.0% | |
| ATCGAGCTCATGACCAATAG+CGG | - | chr1.4:87231101-87231120 | MS.gene49455:intron | 45.0% | |
| CAAGGGTAAGGTTGTAGGAA+AGG | - | chr1.4:87231763-87231782 | MS.gene49455:CDS | 45.0% | |
| CAGAATTAAACCGCTGAACC+CGG | + | chr1.4:87231890-87231909 | None:intergenic | 45.0% | |
| CGGGATATAAACTGGCTATG+AGG | - | chr1.4:87231623-87231642 | MS.gene49455:CDS | 45.0% | |
| CGGGCTTCCCAAAATCAATA+TGG | - | chr1.4:87230233-87230252 | MS.gene49455:CDS | 45.0% | |
| CTTGGGAATCTCACCTTAAG+AGG | + | chr1.4:87231448-87231467 | None:intergenic | 45.0% | |
| GCTTTGTCAGGATGGAATCA+TGG | - | chr1.4:87232090-87232109 | MS.gene49455:CDS | 45.0% | |
| GGGTCGTGGAAGAATATCTA+TGG | - | chr1.4:87229402-87229421 | MS.gene49455:CDS | 45.0% | |
| GGTTCAGCGGTTTAATTCTG+TGG | - | chr1.4:87231890-87231909 | MS.gene49455:CDS | 45.0% | |
| GTCCTGATAACCCCCATTAT+AGG | + | chr1.4:87230205-87230224 | None:intergenic | 45.0% | |
| GTGGACACTTGGAAAAGTCT+TGG | + | chr1.4:87231466-87231485 | None:intergenic | 45.0% | |
| TACTGCTACGCAACAAGTTC+TGG | + | chr1.4:87231507-87231526 | None:intergenic | 45.0% | |
| TATACAAAGCTCGCACCATG+TGG | - | chr1.4:87230086-87230105 | MS.gene49455:CDS | 45.0% | |
| TCCTACAACCTTACCCTTGA+CGG | + | chr1.4:87231762-87231781 | None:intergenic | 45.0% | |
| TGAAGTGGCCAAAACCCTAA+GGG | + | chr1.4:87230027-87230046 | None:intergenic | 45.0% | |
| TGGGAATCTCACCTTAAGAG+GGG | + | chr1.4:87231446-87231465 | None:intergenic | 45.0% | |
| TTGAAGTGGCCAAAACCCTA+AGG | + | chr1.4:87230028-87230047 | None:intergenic | 45.0% | |
| TTGGGAAGGAACTTTCGTGA+AGG | - | chr1.4:87232068-87232087 | MS.gene49455:CDS | 45.0% | |
| ! | AATCGTTGGTTGCAAGAGAC+GGG | - | chr1.4:87232168-87232187 | MS.gene49455:CDS | 45.0% |
| ! | ACTTTCGTGAAGGCTTTGTC+AGG | - | chr1.4:87232078-87232097 | MS.gene49455:CDS | 45.0% |
| ! | CTGAAAAGGGAAAGTGTGCA+AGG | + | chr1.4:87230346-87230365 | None:intergenic | 45.0% |
| ! | GGAAAGTGTGCAAGGCAATA+GGG | + | chr1.4:87230338-87230357 | None:intergenic | 45.0% |
| ! | GGATATGTCTATCTGGGATG+AGG | - | chr1.4:87231573-87231592 | MS.gene49455:CDS | 45.0% |
| !! | CTTCCTTTTGAGTGGACACT+TGG | + | chr1.4:87231477-87231496 | None:intergenic | 45.0% |
| !! | GCGGAGATTCTAGTTTACGA+AGG | - | chr1.4:87232120-87232139 | MS.gene49455:CDS | 45.0% |
| ACATCTCAGTGAGCAGGACA+GGG | + | chr1.4:87231795-87231814 | None:intergenic | 50.0% | |
| ACCGTCAAGGGTAAGGTTGT+AGG | - | chr1.4:87231758-87231777 | MS.gene49455:CDS | 50.0% | |
| AGACGTGTCAGTCGTATCTG+TGG | - | chr1.4:87231952-87231971 | MS.gene49455:CDS | 50.0% | |
| AGTTTACGAAGGCGAGCCTT+TGG | - | chr1.4:87232131-87232150 | MS.gene49455:CDS | 50.0% | |
| CAACACACATCTCAGTGAGC+AGG | + | chr1.4:87231801-87231820 | None:intergenic | 50.0% | |
| CTGAACCCGGGACTACAAAA+TGG | + | chr1.4:87231877-87231896 | None:intergenic | 50.0% | |
| CTGTGGGAGCAGTGTATTGA+TGG | - | chr1.4:87231907-87231926 | MS.gene49455:CDS | 50.0% | |
| GAAGTGGCCAAAACCCTAAG+GGG | + | chr1.4:87230026-87230045 | None:intergenic | 50.0% | |
| GGAAGCTGACCTTTCTTCAG+TGG | - | chr1.4:87232248-87232267 | MS.gene49455:CDS | 50.0% | |
| GGTAAGGTTGTAGGAAAGGC+AGG | - | chr1.4:87231767-87231786 | MS.gene49455:CDS | 50.0% | |
| GGTTATCAGGACCGATGCTT+CGG | - | chr1.4:87230213-87230232 | MS.gene49455:CDS | 50.0% | |
| GTACAGACAAGTGGGAAGAG+TGG | - | chr1.4:87231993-87232012 | MS.gene49455:CDS | 50.0% | |
| GTTATCAGGACCGATGCTTC+GGG | - | chr1.4:87230214-87230233 | MS.gene49455:CDS | 50.0% | |
| TCGAAGTTGCTCACCGTCAA+GGG | - | chr1.4:87231746-87231765 | MS.gene49455:CDS | 50.0% | |
| ! | ATCTGGGATGAGGAGATGCA+TGG | - | chr1.4:87231583-87231602 | MS.gene49455:CDS | 50.0% |
| ! | GAAGGTTGAGAGCTTTGTCC+CGG | + | chr1.4:87230051-87230070 | None:intergenic | 50.0% |
| ! | GCTCCCAATTTTGTAGGTCG+TGG | - | chr1.4:87229544-87229563 | MS.gene49455:CDS | 50.0% |
| ! | GGGAAAGTGTGCAAGGCAAT+AGG | + | chr1.4:87230339-87230358 | None:intergenic | 50.0% |
| ! | TCGTGAAGGCTTTGTCAGGA+TGG | - | chr1.4:87232082-87232101 | MS.gene49455:CDS | 50.0% |
| ! | TTTTGTAGTCCCGGGTTCAG+CGG | - | chr1.4:87231877-87231896 | MS.gene49455:CDS | 50.0% |
| !! | AGGGTTTTGGCCACTTCAAC+CGG | - | chr1.4:87230029-87230048 | MS.gene49455:intron | 50.0% |
| !! | TTTTGGGAAGCCCGAAGCAT+CGG | + | chr1.4:87230227-87230246 | None:intergenic | 50.0% |
| CACATCTCAGTGAGCAGGAC+AGG | + | chr1.4:87231796-87231815 | None:intergenic | 55.0% | |
| CACCATGTGGAGTCTGAGGA+GGG | - | chr1.4:87230099-87230118 | MS.gene49455:CDS | 55.0% | |
| CAGACAAGTGGGAAGAGTGG+AGG | - | chr1.4:87231996-87232015 | MS.gene49455:CDS | 55.0% | |
| GGTGTCTGCTACCCCTCTTA+AGG | - | chr1.4:87231432-87231451 | MS.gene49455:CDS | 55.0% | |
| GTCGAAGTTGCTCACCGTCA+AGG | - | chr1.4:87231745-87231764 | MS.gene49455:CDS | 55.0% | |
| GTTGCTCACCGTCAAGGGTA+AGG | - | chr1.4:87231751-87231770 | MS.gene49455:CDS | 55.0% | |
| TACCCTCCTCAGACTCCACA+TGG | + | chr1.4:87230104-87230123 | None:intergenic | 55.0% | |
| TGGGGCTAATTGGGCCAATC+AGG | - | chr1.4:87230164-87230183 | MS.gene49455:CDS | 55.0% | |
| ! | GAGCTTTGTCCCGGTTGAAG+TGG | + | chr1.4:87230042-87230061 | None:intergenic | 55.0% |
| !! | GGGTTTTGGCCACTTCAACC+GGG | - | chr1.4:87230030-87230049 | MS.gene49455:intron | 55.0% |
| AGAGGGGTAGCAGACACCCA+AGG | + | chr1.4:87231430-87231449 | None:intergenic | 60.0% | |
| CTCGCACCATGTGGAGTCTG+AGG | - | chr1.4:87230095-87230114 | MS.gene49455:CDS | 60.0% | |
| GCACCATGTGGAGTCTGAGG+AGG | - | chr1.4:87230098-87230117 | MS.gene49455:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 87229400 | 87232284 | 87229400 | ID=MS.gene49455 |
| chr1.4 | mRNA | 87229400 | 87232284 | 87229400 | ID=MS.gene49455.t1;Parent=MS.gene49455 |
| chr1.4 | exon | 87231230 | 87232284 | 87231230 | ID=MS.gene49455.t1.exon1;Parent=MS.gene49455.t1 |
| chr1.4 | CDS | 87231230 | 87232284 | 87231230 | ID=cds.MS.gene49455.t1;Parent=MS.gene49455.t1 |
| chr1.4 | exon | 87230076 | 87230264 | 87230076 | ID=MS.gene49455.t1.exon2;Parent=MS.gene49455.t1 |
| chr1.4 | CDS | 87230076 | 87230264 | 87230076 | ID=cds.MS.gene49455.t1;Parent=MS.gene49455.t1 |
| chr1.4 | exon | 87229400 | 87229685 | 87229400 | ID=MS.gene49455.t1.exon3;Parent=MS.gene49455.t1 |
| chr1.4 | CDS | 87229400 | 87229685 | 87229400 | ID=cds.MS.gene49455.t1;Parent=MS.gene49455.t1 |
| Gene Sequence |
| Protein sequence |
