AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49497

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49497.t1 MTR_6g051425 74.419 172 40 1 1 168 1 172 2.50e-86 274
MS.gene49497.t1 MTR_3g465760 77.143 70 12 1 40 105 1 70 1.09e-29 112
MS.gene49497.t1 MTR_2g039370 74.648 71 18 0 49 119 98 168 6.31e-28 114
MS.gene49497.t1 MTR_2g098920 30.275 109 71 2 18 124 81 186 1.10e-13 72.0
MS.gene49497.t1 MTR_6g022070 31.361 169 104 6 190 348 1 167 4.95e-13 71.2
MS.gene49497.t1 MTR_1g013060 28.571 182 114 5 19 188 26 203 1.53e-12 68.2
MS.gene49497.t1 MTR_4g067290 30.357 112 75 2 14 124 53 162 2.16e-12 67.8
MS.gene49497.t1 MTR_4g067290 30.357 112 75 2 14 124 53 162 2.25e-12 67.8
MS.gene49497.t1 MTR_4g067290 30.357 112 75 2 14 124 113 222 3.28e-12 68.2
MS.gene49497.t1 MTR_4g067290 30.357 112 75 2 14 124 73 182 3.70e-12 67.4
MS.gene49497.t1 MTR_4g067290 30.357 112 75 2 14 124 73 182 3.73e-12 67.4
MS.gene49497.t1 MTR_4g067290 30.357 112 75 2 14 124 71 180 3.84e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49497.t1 AT4G38180 32.192 292 182 6 171 448 351 640 4.92e-42 163
MS.gene49497.t1 AT4G38180 30.286 175 113 3 2 172 62 231 1.23e-17 87.8
MS.gene49497.t1 AT2G27110 29.970 337 211 10 170 487 152 482 3.70e-38 151
MS.gene49497.t1 AT2G27110 29.641 334 211 9 170 484 297 625 6.30e-38 151
MS.gene49497.t1 AT2G27110 29.641 334 211 9 170 484 297 625 6.30e-38 151
MS.gene49497.t1 AT1G76320 30.903 288 181 5 170 444 263 545 1.01e-37 149
MS.gene49497.t1 AT1G76320 30.903 288 181 4 170 444 263 545 1.09e-37 150
MS.gene49497.t1 AT1G76320 30.903 288 181 4 170 444 263 545 1.21e-37 150
MS.gene49497.t1 AT1G76320 30.903 288 181 4 170 444 263 545 1.21e-37 150
MS.gene49497.t1 AT4G15090 28.966 290 190 4 170 446 326 612 4.74e-37 149
MS.gene49497.t1 AT4G15090 28.966 290 190 4 170 446 326 612 4.74e-37 149
MS.gene49497.t1 AT4G15090 28.966 290 190 4 170 446 326 612 4.74e-37 149
MS.gene49497.t1 AT4G15090 28.966 290 190 4 170 446 326 612 4.74e-37 149
MS.gene49497.t1 AT4G15090 28.966 290 190 4 170 446 326 612 4.74e-37 149
MS.gene49497.t1 AT4G19990 30.690 290 183 5 170 444 217 503 7.53e-35 141
MS.gene49497.t1 AT4G19990 30.584 291 184 5 169 444 273 560 1.01e-34 141
MS.gene49497.t1 AT4G19990 30.690 290 183 5 170 444 288 574 1.14e-34 141
MS.gene49497.t1 AT4G19990 30.584 291 184 5 169 444 273 560 1.20e-34 141
MS.gene49497.t1 AT4G19990 30.584 291 184 5 169 444 273 560 1.20e-34 141
MS.gene49497.t1 AT4G19990 30.584 291 184 5 169 444 273 560 1.28e-34 141
MS.gene49497.t1 AT4G19990 30.584 291 184 5 169 444 273 560 1.28e-34 141
MS.gene49497.t1 AT4G38170 26.042 288 196 5 170 443 115 399 4.13e-33 134
MS.gene49497.t1 AT5G18960 27.551 294 178 6 169 442 449 727 1.30e-30 129
MS.gene49497.t1 AT5G18960 27.551 294 178 6 169 442 449 727 1.30e-30 129
MS.gene49497.t1 AT3G22170 26.804 291 193 5 169 444 334 619 1.65e-30 128
MS.gene49497.t1 AT3G22170 26.804 291 193 5 169 444 334 619 1.65e-30 128
MS.gene49497.t1 AT3G06250 27.027 296 177 7 169 442 425 703 2.01e-30 128
MS.gene49497.t1 AT3G06250 27.027 296 177 7 169 442 425 703 2.01e-30 128
MS.gene49497.t1 AT3G06250 27.027 296 177 7 169 442 425 703 2.01e-30 128
MS.gene49497.t1 AT2G32250 26.990 289 191 5 169 442 228 511 4.95e-30 127
MS.gene49497.t1 AT2G32250 26.990 289 191 5 169 442 228 511 5.10e-30 127
MS.gene49497.t1 AT2G32250 27.083 288 190 5 170 442 270 552 5.31e-30 126
MS.gene49497.t1 AT2G32250 26.990 289 191 5 169 442 269 552 5.38e-30 127
MS.gene49497.t1 AT2G32250 26.990 289 191 5 169 442 269 552 5.38e-30 127
MS.gene49497.t1 AT2G32250 26.990 289 191 5 169 442 269 552 5.45e-30 127
MS.gene49497.t1 AT2G32250 26.990 289 191 5 169 442 269 552 5.45e-30 127
MS.gene49497.t1 AT2G32250 26.990 289 191 5 169 442 269 552 5.45e-30 127
MS.gene49497.t1 AT1G52520 28.223 287 186 4 173 440 350 635 2.18e-28 121
MS.gene49497.t1 AT1G10240 28.525 305 186 9 155 444 321 608 3.08e-26 114
MS.gene49497.t1 AT1G10240 27.333 150 96 4 18 158 49 194 3.10e-11 67.0
MS.gene49497.t1 AT1G10240 28.525 305 186 9 155 444 321 608 3.08e-26 114
MS.gene49497.t1 AT1G10240 27.333 150 96 4 18 158 49 194 3.10e-11 67.0
MS.gene49497.t1 AT5G28530 24.830 294 194 5 170 449 343 623 2.42e-21 99.4
MS.gene49497.t1 AT5G28530 24.830 294 194 5 170 449 343 623 2.42e-21 99.4
MS.gene49497.t1 AT5G28530 24.830 294 194 5 170 449 280 560 2.92e-21 99.0
MS.gene49497.t1 AT5G28530 26.102 295 193 7 170 449 343 627 1.03e-20 97.4
MS.gene49497.t1 AT5G28530 26.102 295 193 7 170 449 280 564 1.41e-20 96.7
MS.gene49497.t1 AT1G80010 24.503 302 192 6 170 445 372 663 8.47e-20 94.7
MS.gene49497.t1 AT3G59470 34.286 105 64 2 18 120 71 172 6.12e-12 66.6
MS.gene49497.t1 AT3G59470 34.286 105 64 2 18 120 71 172 6.12e-12 66.6
MS.gene49497.t1 AT3G59470 34.286 105 64 2 18 120 83 184 7.32e-12 66.6

Find 92 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAAATATTTGGAGCTATT+TGG 0.130199 8.1:+33979655 MS.gene49497:CDS
TTGGTTGTTTAAAGTGTTTC+TGG 0.130308 8.1:+33982330 MS.gene49497:intron
TTTATTAGAATTTGAGAAAA+TGG 0.183724 8.1:+33982774 MS.gene49497:CDS
TCGTACGCCACTTCCCTTTC+CGG 0.198571 8.1:-33979428 None:intergenic
GTATAAAGGTTACAAATATT+TGG 0.202805 8.1:+33979645 MS.gene49497:CDS
ACAAATATTTGGAGCTATTT+GGG 0.211764 8.1:+33979656 MS.gene49497:CDS
TAAAGTGTTTCTGGAGAGTA+TGG 0.232280 8.1:+33982339 MS.gene49497:intron
ATTCTGTTAATTCCTCAAAT+TGG 0.245595 8.1:+33983884 MS.gene49497:CDS
TCAACAACATGCCTTCAAAA+TGG 0.254016 8.1:+33979301 MS.gene49497:CDS
AACTTAAATCTAAATTCTTT+TGG 0.257029 8.1:-33984118 None:intergenic
TTGACCAACAAATATATCTT+TGG 0.275301 8.1:-33979243 None:intergenic
TGTCATAAGTTTGATTCTTT+AGG 0.276142 8.1:+33983084 MS.gene49497:CDS
ATTGTTCTTAAACCCTTGTT+TGG 0.324595 8.1:-33979402 None:intergenic
GAGAGTACAAATAGTGTATT+AGG 0.329101 8.1:+33982715 MS.gene49497:CDS
TATGGTGAATTCTGGTATAA+AGG 0.335301 8.1:+33979631 MS.gene49497:CDS
AGGTGGTCTTATAAAATCTA+TGG 0.343739 8.1:+33979613 MS.gene49497:CDS
CAAATCATCGATTATGTTTG+TGG 0.354591 8.1:+33982440 MS.gene49497:CDS
ATAAAATCTATGGTGAATTC+TGG 0.357961 8.1:+33979623 MS.gene49497:CDS
ATGTAAGCAAAGATGGAGTA+TGG 0.368773 8.1:+33979495 MS.gene49497:CDS
TTGTGCTACTAATTCTTCAA+TGG 0.370084 8.1:+33983704 MS.gene49497:CDS
CTATCTTGAAGAATGTTACT+TGG 0.379881 8.1:-33984087 None:intergenic
GATAAATGAGTACAAGCTTC+AGG 0.382563 8.1:+33982591 MS.gene49497:CDS
TTAGCATCAGTGAAACAAAA+AGG 0.388778 8.1:+33983672 MS.gene49497:intron
AGAGCCTTTGTCCATGCAAT+TGG 0.396932 8.1:-33983745 None:intergenic
CATTACATCCGCAATTGCTT+TGG 0.401007 8.1:-33982410 None:intergenic
TAGATCGCAGCAAATGTCTT+TGG 0.402988 8.1:-33979568 None:intergenic
AGCTTGTTCCAAAGTCTTGC+TGG 0.403603 8.1:-33982872 None:intergenic
GTAGGTGGATTTGATAATCT+TGG 0.413208 8.1:+33979686 MS.gene49497:CDS
CAACAACATGCCTTCAAAAT+GGG 0.420203 8.1:+33979302 MS.gene49497:CDS
TGGGAAAATTGTTGATGAAA+AGG 0.422125 8.1:+33983443 MS.gene49497:CDS
GGTAAAGAAGTGGCGGCAAT+TGG 0.427481 8.1:+33982795 MS.gene49497:CDS
TATAAACACCAGCAAGACTT+TGG 0.430072 8.1:+33982864 MS.gene49497:CDS
TGTACAAAATTCGTCACAAA+TGG 0.433626 8.1:+33982635 MS.gene49497:CDS
TGTGCTACTAATTCTTCAAT+GGG 0.439423 8.1:+33983705 MS.gene49497:CDS
TTCTAATGTTTCCAATTGCA+TGG 0.443676 8.1:+33983734 MS.gene49497:CDS
CAATTCAATGTAAGCAAAGA+TGG 0.453054 8.1:+33979488 MS.gene49497:CDS
CGCAGCAAATGTCTTTGGTC+TGG 0.453204 8.1:-33979563 None:intergenic
CTACAAGGAATGAGTTCATA+TGG 0.461551 8.1:+33983943 MS.gene49497:CDS
GAGTCCAAAGATATATTTGT+TGG 0.461723 8.1:+33979239 MS.gene49497:CDS
ATCCGCAATTGCTTTGGCCA+TGG 0.470670 8.1:-33982404 None:intergenic
ATGCAATTGGAAACATTAGA+AGG 0.477669 8.1:-33983732 None:intergenic
AGTATGGAAAATTACAAAGT+TGG 0.484176 8.1:+33979511 MS.gene49497:CDS
AAGAAGAATTTGAAAACACT+TGG 0.490715 8.1:+33982560 MS.gene49497:CDS
ATTCAAATGCAACGACCAAT+GGG 0.491277 8.1:+33983424 MS.gene49497:CDS
GATTCAAATGCAACGACCAA+TGG 0.492773 8.1:+33983423 MS.gene49497:CDS
TGAGTTAAAACTCCAATTTG+AGG 0.504719 8.1:-33983896 None:intergenic
CTCAACAGATTATGTGGAAG+TGG 0.505410 8.1:+33983349 MS.gene49497:CDS
GCTACGATATACTTCTTATG+AGG 0.511814 8.1:-33983027 None:intergenic
AAGAAGCTCAACAGATTATG+TGG 0.515069 8.1:+33983343 MS.gene49497:CDS
TTGCGAATTTACAACATCAA+AGG 0.519182 8.1:+33983126 MS.gene49497:CDS
CCTTGTAGCATACTAGTGAA+TGG 0.519313 8.1:-33983928 None:intergenic
TCTTGAAGAATGTTACTTGG+AGG 0.523121 8.1:-33984084 None:intergenic
TTCATATGGTCATTTAAGCC+AGG 0.526410 8.1:+33983957 MS.gene49497:CDS
ATGTGGAAGTGGCTTGATGT+TGG 0.533265 8.1:+33983360 MS.gene49497:CDS
CAATGATCCGGAAAGGGAAG+TGG 0.539057 8.1:+33979421 MS.gene49497:CDS
TAAGAACAATGATCCGGAAA+GGG 0.539665 8.1:+33979415 MS.gene49497:CDS
AGGGTTTAAGAACAATGATC+CGG 0.540376 8.1:+33979409 MS.gene49497:CDS
ACACACTTGAATCTCTATAG+AGG 0.541107 8.1:-33982965 None:intergenic
CAAATATTTGGAGCTATTTG+GGG 0.544736 8.1:+33979657 MS.gene49497:CDS
TTTAGATCACCTAAATGAGA+AGG 0.552448 8.1:-33982481 None:intergenic
GGTCTGGTGGTGCAAAGTCA+TGG 0.553579 8.1:-33979547 None:intergenic
CATGTTGACCATCCAAAACA+AGG 0.554889 8.1:-33983317 None:intergenic
CCATTCACTAGTATGCTACA+AGG 0.564851 8.1:+33983928 MS.gene49497:CDS
AATGAATATCTTGAGGGTGC+TGG 0.569300 8.1:+33982934 MS.gene49497:CDS
GAAAATTGTTGATGAAAAGG+AGG 0.573659 8.1:+33983446 MS.gene49497:CDS
AAAGTGTTTCTGGAGAGTAT+GGG 0.580420 8.1:+33982340 MS.gene49497:intron
GAATATCTTGAGGGTGCTGG+TGG 0.580714 8.1:+33982937 MS.gene49497:CDS
GTTATAAAATGACTTCATGA+TGG 0.580882 8.1:-33983295 None:intergenic
TACAGATCAAGATGCAGCCA+TGG 0.582488 8.1:+33982387 MS.gene49497:CDS
AAGAACAGACTGCAAGGCGA+TGG 0.582821 8.1:+33979463 MS.gene49497:CDS
AGGGATCTAGCAACTACCAT+TGG 0.582917 8.1:+33984058 MS.gene49497:intron
AGCAAATGTCTTTGGTCTGG+TGG 0.583572 8.1:-33979560 None:intergenic
AGCCATGGCCAAAGCAATTG+CGG 0.584912 8.1:+33982402 MS.gene49497:CDS
TTGAGAAAATGGTAAAGAAG+TGG 0.587634 8.1:+33982785 MS.gene49497:CDS
AGAAGAATTTGAAAACACTT+GGG 0.589432 8.1:+33982561 MS.gene49497:CDS
TTAAGAACAATGATCCGGAA+AGG 0.594668 8.1:+33979414 MS.gene49497:CDS
GTTTCCAATTGCATGGACAA+AGG 0.602350 8.1:+33983741 MS.gene49497:CDS
ACAAGCTTCAGGATCATAAG+TGG 0.603659 8.1:+33982602 MS.gene49497:CDS
ATTTATGAGCATACTTGTGA+AGG 0.621628 8.1:+33983210 MS.gene49497:CDS
TTGCTGGTGTTTATAACGCG+CGG 0.625953 8.1:-33982856 None:intergenic
GTGCTACTAATTCTTCAATG+GGG 0.626637 8.1:+33983706 MS.gene49497:CDS
GCGGCAATTGGAGAGTGAGA+AGG 0.636149 8.1:+33982807 MS.gene49497:CDS
TGATTCAAGAACAGACTGCA+AGG 0.636893 8.1:+33979457 MS.gene49497:CDS
GTACAACAACGCATCTACCT+CGG 0.639434 8.1:+33982749 MS.gene49497:CDS
AGAAAAGTCACTTTGAGACA+AGG 0.642504 8.1:+33983535 MS.gene49497:CDS
AGAAAATGGTAAAGAAGTGG+CGG 0.645176 8.1:+33982788 MS.gene49497:CDS
TGTTACTTGGAGGTAACCAA+TGG 0.649777 8.1:-33984074 None:intergenic
AGAAATGTATCACAAGCCAA+AGG 0.650055 8.1:+33979593 MS.gene49497:CDS
AATGTATCACAAGCCAAAGG+TGG 0.657940 8.1:+33979596 MS.gene49497:CDS
AAATATTTGGAGCTATTTGG+GGG 0.663067 8.1:+33979658 MS.gene49497:CDS
TGAAATGTCTAATAGTGATG+AGG 0.668790 8.1:+33983251 MS.gene49497:CDS
CTGGTGTTTATAACGCGCGG+AGG 0.712128 8.1:-33982853 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATTAGAATAAAAATG+GGG + chr8.1:33982015-33982034 MS.gene49497:intron 10.0%
!! CTAAAATATTAGAATAAAAA+TGG + chr8.1:33982013-33982032 MS.gene49497:intron 10.0%
!! CTATTTATTATATGAATATT+GGG - chr8.1:33981892-33981911 None:intergenic 10.0%
!! GAATTATATATTATCATTAT+TGG - chr8.1:33980203-33980222 None:intergenic 10.0%
!! TATATATAACTTATTAAGAA+TGG - chr8.1:33983825-33983844 None:intergenic 10.0%
!! TATTTATTATATGAATATTG+GGG - chr8.1:33981891-33981910 None:intergenic 10.0%
!!! ATAGAAATAGTATTTATTTT+TGG - chr8.1:33981804-33981823 None:intergenic 10.0%
!! GCTATTTATTATATGAATAT+TGG - chr8.1:33981893-33981912 None:intergenic 15.0%
!! TCAAATCATATTTATTTGTT+CGG - chr8.1:33982219-33982238 None:intergenic 15.0%
!! TGGAAATTAATAGAAATTAA+GGG - chr8.1:33981766-33981785 None:intergenic 15.0%
!! TTGTAAGATAATTTAAATGT+CGG - chr8.1:33979903-33979922 None:intergenic 15.0%
!! TTTATTAGAATTTGAGAAAA+TGG + chr8.1:33982774-33982793 MS.gene49497:CDS 15.0%
!!! ATAGTATTTATTTTTGGTTA+AGG - chr8.1:33981798-33981817 None:intergenic 15.0%
!!! TAAATGAATGTTGTTATTAT+TGG - chr8.1:33981856-33981875 None:intergenic 15.0%
!!! TAGTATTTATTTTTGGTTAA+GGG - chr8.1:33981797-33981816 None:intergenic 15.0%
!!! TTATTCTAATATTTTAGTAG+AGG - chr8.1:33982010-33982029 None:intergenic 15.0%
!! AAAACAATCATAATCAACTT+TGG - chr8.1:33982167-33982186 None:intergenic 20.0%
!! AAGCTAATTCAAAATAGAAA+CGG + chr8.1:33981167-33981186 MS.gene49497:intron 20.0%
!! AATAAAGTTGAATTATGTTG+TGG - chr8.1:33979997-33980016 None:intergenic 20.0%
!! ATTGAAGAAAATATGATGAA+TGG - chr8.1:33981468-33981487 None:intergenic 20.0%
!! GTATAAAGGTTACAAATATT+TGG + chr8.1:33979645-33979664 MS.gene49497:CDS 20.0%
!! GTGGAAATTAATAGAAATTA+AGG - chr8.1:33981767-33981786 None:intergenic 20.0%
!! TAAAAACATTAGAAGAAAAC+TGG - chr8.1:33981671-33981690 None:intergenic 20.0%
!! TATATACCATGATTATTGAA+AGG + chr8.1:33981544-33981563 MS.gene49497:intron 20.0%
!! TGAAGTAAAAGAAAGAAAAA+GGG - chr8.1:33981711-33981730 None:intergenic 20.0%
!! TTGAAGTAAAAGAAAGAAAA+AGG - chr8.1:33981712-33981731 None:intergenic 20.0%
!!! AAAGTTGATTATGATTGTTT+TGG + chr8.1:33982166-33982185 MS.gene49497:intron 20.0%
!!! AACATTGTTCTAATTCATTT+TGG - chr8.1:33981386-33981405 None:intergenic 20.0%
!!! ACATTGTTCTAATTCATTTT+GGG - chr8.1:33981385-33981404 None:intergenic 20.0%
!!! ACTTTTATTGATGTTGAATT+TGG - chr8.1:33979962-33979981 None:intergenic 20.0%
!!! AGTATTTATTTTTGGTTAAG+GGG - chr8.1:33981796-33981815 None:intergenic 20.0%
!!! ATCAAAACTTAATTGCTTTT+GGG - chr8.1:33980899-33980918 None:intergenic 20.0%
!!! ATTTTTATTGTTCCAAACAA+GGG + chr8.1:33979390-33979409 MS.gene49497:CDS 20.0%
!!! CTTTTATGTATCACATATTT+TGG - chr8.1:33980037-33980056 None:intergenic 20.0%
!!! TATTTTTATTGTTCCAAACA+AGG + chr8.1:33979389-33979408 MS.gene49497:CDS 20.0%
!!! TTCTATTTTGAATTAGCTTT+AGG - chr8.1:33981166-33981185 None:intergenic 20.0%
! AACTTCAAACTTAAGTGTTA+GGG - chr8.1:33980965-33980984 None:intergenic 25.0%
! AAGAAGAATTTGAAAACACT+TGG + chr8.1:33982560-33982579 MS.gene49497:CDS 25.0%
! AAGTCAAAATTAATTGAAGC+AGG + chr8.1:33979749-33979768 MS.gene49497:intron 25.0%
! AGAAGAATTTGAAAACACTT+GGG + chr8.1:33982561-33982580 MS.gene49497:CDS 25.0%
! AGCTAATTCAAAATAGAAAC+GGG + chr8.1:33981168-33981187 MS.gene49497:intron 25.0%
! AGTATGGAAAATTACAAAGT+TGG + chr8.1:33979511-33979530 MS.gene49497:CDS 25.0%
! AGTCAAAATTAATTGAAGCA+GGG + chr8.1:33979750-33979769 MS.gene49497:intron 25.0%
! ATAAAATCTATGGTGAATTC+TGG + chr8.1:33979623-33979642 MS.gene49497:CDS 25.0%
! ATATTGATCATTTGTATACC+TGG - chr8.1:33983978-33983997 None:intergenic 25.0%
! ATATTTATTTGTTCGGTAAG+TGG - chr8.1:33982212-33982231 None:intergenic 25.0%
! ATTCTGTTAATTCCTCAAAT+TGG + chr8.1:33983884-33983903 MS.gene49497:CDS 25.0%
! CACTTTAAACAACCAATTAA+AGG - chr8.1:33982326-33982345 None:intergenic 25.0%
! GTTATAAAATGACTTCATGA+TGG - chr8.1:33983298-33983317 None:intergenic 25.0%
! TAAGTTATTCACCAAAGATT+TGG - chr8.1:33982050-33982069 None:intergenic 25.0%
! TAATAGAAATTAAGGGAGTT+GGG - chr8.1:33981759-33981778 None:intergenic 25.0%
! TCAAATTCTAATAAAAACCG+AGG - chr8.1:33982769-33982788 None:intergenic 25.0%
! TGAATTAGAACAATGTTTAC+AGG + chr8.1:33981389-33981408 MS.gene49497:intron 25.0%
! TGTCATAAGTTTGATTCTTT+AGG + chr8.1:33983084-33983103 MS.gene49497:CDS 25.0%
! TTAATAGAAATTAAGGGAGT+TGG - chr8.1:33981760-33981779 None:intergenic 25.0%
! TTCAACATCAATAAAAGTCT+TGG + chr8.1:33979964-33979983 MS.gene49497:intron 25.0%
! TTGACCAACAAATATATCTT+TGG - chr8.1:33979246-33979265 None:intergenic 25.0%
!! AAATCACTTCTTTTTATTGC+AGG + chr8.1:33984038-33984057 MS.gene49497:intron 25.0%
!! AACAACGACATAATCATTTT+CGG + chr8.1:33980291-33980310 MS.gene49497:intron 25.0%
!! AATCACTTCTTTTTATTGCA+GGG + chr8.1:33984039-33984058 MS.gene49497:intron 25.0%
!! ACAAATATTTGGAGCTATTT+GGG + chr8.1:33979656-33979675 MS.gene49497:CDS 25.0%
!! ATTTGATGAATTGTTGTTCT+TGG - chr8.1:33981516-33981535 None:intergenic 25.0%
!! GATCAAAACTTAATTGCTTT+TGG - chr8.1:33980900-33980919 None:intergenic 25.0%
!! TAACACTTAAGTTTGAAGTT+GGG + chr8.1:33980965-33980984 MS.gene49497:intron 25.0%
!! TACAAATATTTGGAGCTATT+TGG + chr8.1:33979655-33979674 MS.gene49497:CDS 25.0%
!! TGATCTGTAAAGATTGTTTT+TGG - chr8.1:33982376-33982395 None:intergenic 25.0%
!! TTTTCGAATGAATATCTTGA+GGG + chr8.1:33982928-33982947 MS.gene49497:CDS 25.0%
!!! AATTGTTGTTCTTGGTTTTA+GGG - chr8.1:33981508-33981527 None:intergenic 25.0%
!!! ATATTAATTTGTTGGGAGAA+CGG - chr8.1:33979792-33979811 None:intergenic 25.0%
!!! ATCAATACTTTTTGAAACGA+TGG + chr8.1:33983166-33983185 MS.gene49497:CDS 25.0%
!!! CATAATCGATGATTTGTTTT+TGG - chr8.1:33982436-33982455 None:intergenic 25.0%
!!! GTCATTTTATAACCTTGTTT+TGG + chr8.1:33983305-33983324 MS.gene49497:CDS 25.0%
!!! GTTGTTTTATATCCTTTGAT+AGG + chr8.1:33983855-33983874 MS.gene49497:intron 25.0%
!!! TAATTCATTTTGGGTGATTA+GGG - chr8.1:33981376-33981395 None:intergenic 25.0%
!!! TAATTGAGTTAGCTTTCTAA+TGG - chr8.1:33981122-33981141 None:intergenic 25.0%
!!! TCAAAACTTAATTGCTTTTG+GGG - chr8.1:33980898-33980917 None:intergenic 25.0%
!!! TCAACAAACTTTGAAACTTA+CGG - chr8.1:33982513-33982532 None:intergenic 25.0%
!!! TTTTATAACCTTGTTTTGGA+TGG + chr8.1:33983309-33983328 MS.gene49497:CDS 25.0%
AAAAATGCTCCTTCTCATTT+AGG + chr8.1:33982472-33982491 MS.gene49497:CDS 30.0%
AAATCAGAGTAATCACACAA+CGG + chr8.1:33979821-33979840 MS.gene49497:intron 30.0%
AACAATTGTGAGTATGCAAA+TGG + chr8.1:33980690-33980709 MS.gene49497:intron 30.0%
AATCCTCAACTTCCTTTAAT+TGG + chr8.1:33982311-33982330 MS.gene49497:intron 30.0%
AATGTTTATCATTCACCTGT+TGG - chr8.1:33980614-33980633 None:intergenic 30.0%
AATTATCTTACAAACTGCAG+CGG + chr8.1:33979910-33979929 MS.gene49497:intron 30.0%
AGTCAAGCAAAATAAATGTG+AGG + chr8.1:33983575-33983594 MS.gene49497:intron 30.0%
ATGATGAAAATAGTCCAAGT+GGG - chr8.1:33981060-33981079 None:intergenic 30.0%
ATGCAATTGGAAACATTAGA+AGG - chr8.1:33983735-33983754 None:intergenic 30.0%
ATGTTTATCATTCACCTGTT+GGG - chr8.1:33980613-33980632 None:intergenic 30.0%
ATTGTTCTTAAACCCTTGTT+TGG - chr8.1:33979405-33979424 None:intergenic 30.0%
ATTTATGAGCATACTTGTGA+AGG + chr8.1:33983210-33983229 MS.gene49497:CDS 30.0%
ATTTGCATACTCACAATTGT+TGG - chr8.1:33980691-33980710 None:intergenic 30.0%
CAACTTCAAACTTAAGTGTT+AGG - chr8.1:33980966-33980985 None:intergenic 30.0%
CAATTCAATGTAAGCAAAGA+TGG + chr8.1:33979488-33979507 MS.gene49497:CDS 30.0%
CAGAATGATATTCCTATCAA+AGG - chr8.1:33983870-33983889 None:intergenic 30.0%
CTAGTTAGTCCAAAAACTTA+TGG - chr8.1:33980998-33981017 None:intergenic 30.0%
CTATCTTGAAGAATGTTACT+TGG - chr8.1:33984090-33984109 None:intergenic 30.0%
CTTTAACCATCCAAATTGTT+GGG - chr8.1:33980572-33980591 None:intergenic 30.0%
GAGTCCAAAGATATATTTGT+TGG + chr8.1:33979239-33979258 MS.gene49497:CDS 30.0%
GTCAAAATTAATTGAAGCAG+GGG + chr8.1:33979751-33979770 MS.gene49497:intron 30.0%
TATGATGAAAATAGTCCAAG+TGG - chr8.1:33981061-33981080 None:intergenic 30.0%
TATGGTGAATTCTGGTATAA+AGG + chr8.1:33979631-33979650 MS.gene49497:CDS 30.0%
TCAATAAAAGTCTTGGCATA+AGG + chr8.1:33979971-33979990 MS.gene49497:intron 30.0%
TGAAATGTCTAATAGTGATG+AGG + chr8.1:33983251-33983270 MS.gene49497:CDS 30.0%
TGAGTTAAAACTCCAATTTG+AGG - chr8.1:33983899-33983918 None:intergenic 30.0%
TGTACAAAATTCGTCACAAA+TGG + chr8.1:33982635-33982654 MS.gene49497:CDS 30.0%
TTAGCATCAGTGAAACAAAA+AGG + chr8.1:33983672-33983691 MS.gene49497:intron 30.0%
TTAGTCCAAAAACTTATGGT+TGG - chr8.1:33980994-33981013 None:intergenic 30.0%
TTCTAATGTTTCCAATTGCA+TGG + chr8.1:33983734-33983753 MS.gene49497:CDS 30.0%
TTGAGAAAATGGTAAAGAAG+TGG + chr8.1:33982785-33982804 MS.gene49497:CDS 30.0%
TTGCGAATTTACAACATCAA+AGG + chr8.1:33983126-33983145 MS.gene49497:CDS 30.0%
TTTAACCATCCAAATTGTTG+GGG - chr8.1:33980571-33980590 None:intergenic 30.0%
TTTAGATCACCTAAATGAGA+AGG - chr8.1:33982484-33982503 None:intergenic 30.0%
TTTGCATACTCACAATTGTT+GGG - chr8.1:33980690-33980709 None:intergenic 30.0%
! AAATATTTGGAGCTATTTGG+GGG + chr8.1:33979658-33979677 MS.gene49497:CDS 30.0%
! AGATTTTATAAGACCACCTT+TGG - chr8.1:33979612-33979631 None:intergenic 30.0%
! CAAATATTTGGAGCTATTTG+GGG + chr8.1:33979657-33979676 MS.gene49497:CDS 30.0%
! CAAATCATCGATTATGTTTG+TGG + chr8.1:33982440-33982459 MS.gene49497:CDS 30.0%
! CTAACACTTAAGTTTGAAGT+TGG + chr8.1:33980964-33980983 MS.gene49497:intron 30.0%
! CTTTTCGAATGAATATCTTG+AGG + chr8.1:33982927-33982946 MS.gene49497:CDS 30.0%
! GAAAATTGTTGATGAAAAGG+AGG + chr8.1:33983446-33983465 MS.gene49497:CDS 30.0%
! GAGAGTACAAATAGTGTATT+AGG + chr8.1:33982715-33982734 MS.gene49497:CDS 30.0%
! GAGTGTGTCATAATTGTTTT+AGG - chr8.1:33980775-33980794 None:intergenic 30.0%
! TGGGAAAATTGTTGATGAAA+AGG + chr8.1:33983443-33983462 MS.gene49497:CDS 30.0%
! TGTGCTACTAATTCTTCAAT+GGG + chr8.1:33983705-33983724 MS.gene49497:CDS 30.0%
! TTCATCAACAATTTTCCCAT+TGG - chr8.1:33983442-33983461 None:intergenic 30.0%
! TTGGTTGTTTAAAGTGTTTC+TGG + chr8.1:33982330-33982349 MS.gene49497:intron 30.0%
! TTGTGCTACTAATTCTTCAA+TGG + chr8.1:33983704-33983723 MS.gene49497:CDS 30.0%
!! AATTCATTTTGGGTGATTAG+GGG - chr8.1:33981375-33981394 None:intergenic 30.0%
!! AGGTGGTCTTATAAAATCTA+TGG + chr8.1:33979613-33979632 MS.gene49497:CDS 30.0%
!! CAAAACTTAATTGCTTTTGG+GGG - chr8.1:33980897-33980916 None:intergenic 30.0%
!! CATTAGAAGAAAACTGGTTT+TGG - chr8.1:33981665-33981684 None:intergenic 30.0%
!! CGTTTCAAAAAGTATTGATC+AGG - chr8.1:33983165-33983184 None:intergenic 30.0%
!! CTAATTCATTTTGGGTGATT+AGG - chr8.1:33981377-33981396 None:intergenic 30.0%
!! GAATTGTTGTTCTTGGTTTT+AGG - chr8.1:33981509-33981528 None:intergenic 30.0%
!! TATTAATTTGTTGGGAGAAC+GGG - chr8.1:33979791-33979810 None:intergenic 30.0%
AAGAAGCTCAACAGATTATG+TGG + chr8.1:33983343-33983362 MS.gene49497:CDS 35.0%
ACACACTTGAATCTCTATAG+AGG - chr8.1:33982968-33982987 None:intergenic 35.0%
AGAAAATGGTAAAGAAGTGG+CGG + chr8.1:33982788-33982807 MS.gene49497:CDS 35.0%
AGAAATGTATCACAAGCCAA+AGG + chr8.1:33979593-33979612 MS.gene49497:CDS 35.0%
AGGGTTTAAGAACAATGATC+CGG + chr8.1:33979409-33979428 MS.gene49497:CDS 35.0%
AGGTGAATGATAAACATTCC+AGG + chr8.1:33980616-33980635 MS.gene49497:intron 35.0%
AGTTGGGTGAGAAAAGAAAA+GGG - chr8.1:33981743-33981762 None:intergenic 35.0%
ATGATGATTCACACCAACAA+AGG - chr8.1:33982251-33982270 None:intergenic 35.0%
ATGTAAGCAAAGATGGAGTA+TGG + chr8.1:33979495-33979514 MS.gene49497:CDS 35.0%
ATTCAAATGCAACGACCAAT+GGG + chr8.1:33983424-33983443 MS.gene49497:CDS 35.0%
CAACAACATGCCTTCAAAAT+GGG + chr8.1:33979302-33979321 MS.gene49497:CDS 35.0%
CAACCAATTAAAGGAAGTTG+AGG - chr8.1:33982317-33982336 None:intergenic 35.0%
CATTGGCAAAATGTCATGTT+TGG + chr8.1:33982268-33982287 MS.gene49497:intron 35.0%
CCAAAAATAGAAACCTGAGA+TGG - chr8.1:33983798-33983817 None:intergenic 35.0%
CTACAAGGAATGAGTTCATA+TGG + chr8.1:33983943-33983962 MS.gene49497:CDS 35.0%
CTCTGATACATATTAGGATG+GGG - chr8.1:33980084-33980103 None:intergenic 35.0%
GATAAATGAGTACAAGCTTC+AGG + chr8.1:33982591-33982610 MS.gene49497:CDS 35.0%
GCTACGATATACTTCTTATG+AGG - chr8.1:33983030-33983049 None:intergenic 35.0%
GCTCTGATACATATTAGGAT+GGG - chr8.1:33980085-33980104 None:intergenic 35.0%
GCTTTAACCATCCAAATTGT+TGG - chr8.1:33980573-33980592 None:intergenic 35.0%
GGGATTCCTTTCAATAATCA+TGG - chr8.1:33981553-33981572 None:intergenic 35.0%
GGTGAATGATAAACATTCCA+GGG + chr8.1:33980617-33980636 MS.gene49497:intron 35.0%
GTTGAATGATGAACATTCCA+GGG + chr8.1:33980656-33980675 MS.gene49497:intron 35.0%
TAAGAACAATGATCCGGAAA+GGG + chr8.1:33979415-33979434 MS.gene49497:CDS 35.0%
TATAAACACCAGCAAGACTT+TGG + chr8.1:33982864-33982883 MS.gene49497:CDS 35.0%
TATCATCTGATGTCGAAGTT+GGG - chr8.1:33980798-33980817 None:intergenic 35.0%
TCAACAACATGCCTTCAAAA+TGG + chr8.1:33979301-33979320 MS.gene49497:CDS 35.0%
TGATACAACGACATCAACAA+CGG + chr8.1:33980813-33980832 MS.gene49497:intron 35.0%
TGATGATTCACACCAACAAA+GGG - chr8.1:33982250-33982269 None:intergenic 35.0%
TGATTAGGGGATCAGAAAAT+GGG - chr8.1:33981362-33981381 None:intergenic 35.0%
TGTTTATCATTCACCTGTTG+GGG - chr8.1:33980612-33980631 None:intergenic 35.0%
TTAACCATCCAAATTGTTGG+GGG - chr8.1:33980570-33980589 None:intergenic 35.0%
TTAAGAACAATGATCCGGAA+AGG + chr8.1:33979414-33979433 MS.gene49497:CDS 35.0%
TTACGCTAATAGCGAATTTC+TGG + chr8.1:33981286-33981305 MS.gene49497:intron 35.0%
TTCATATGGTCATTTAAGCC+AGG + chr8.1:33983957-33983976 MS.gene49497:CDS 35.0%
TTGCACACTATAGTAGAACA+TGG - chr8.1:33982095-33982114 None:intergenic 35.0%
TTGCATACTCACAATTGTTG+GGG - chr8.1:33980689-33980708 None:intergenic 35.0%
TTGTCGAATTGTCGAGTTAT+CGG - chr8.1:33980371-33980390 None:intergenic 35.0%
TTGTTGAATCAATGCATGTC+AGG + chr8.1:33982526-33982545 MS.gene49497:intron 35.0%
TTGTTGGTGTGAATCATCAT+TGG + chr8.1:33982251-33982270 MS.gene49497:intron 35.0%
TTTGGTTAAGGGGAATTAAG+TGG - chr8.1:33981786-33981805 None:intergenic 35.0%
! CACACTAAAACCCATTTTGA+AGG - chr8.1:33979315-33979334 None:intergenic 35.0%
! CATAATCATTTTCGGCAACA+AGG + chr8.1:33980299-33980318 MS.gene49497:intron 35.0%
! CCATCTCAGGTTTCTATTTT+TGG + chr8.1:33983795-33983814 MS.gene49497:intron 35.0%
! GGAAACCAACCATAAGTTTT+TGG + chr8.1:33980986-33981005 MS.gene49497:intron 35.0%
! GTAGGTGGATTTGATAATCT+TGG + chr8.1:33979686-33979705 MS.gene49497:CDS 35.0%
! GTGCTACTAATTCTTCAATG+GGG + chr8.1:33983706-33983725 MS.gene49497:CDS 35.0%
! GTGTTGCTGAATTAAGGTAA+GGG - chr8.1:33981577-33981596 None:intergenic 35.0%
! TCTTGAAGAATGTTACTTGG+AGG - chr8.1:33984087-33984106 None:intergenic 35.0%
! TTTTAGTGTGAGAAAAGGGA+AGG + chr8.1:33979325-33979344 MS.gene49497:CDS 35.0%
!! AAAGTGTTTCTGGAGAGTAT+GGG + chr8.1:33982340-33982359 MS.gene49497:intron 35.0%
!! AAATTTTCTGAAGACCCACT+TGG + chr8.1:33981043-33981062 MS.gene49497:intron 35.0%
!! AGAAAAGTCACTTTGAGACA+AGG + chr8.1:33983535-33983554 MS.gene49497:CDS 35.0%
!! AGTTAGCTTTCTAATGGCTT+TGG - chr8.1:33981116-33981135 None:intergenic 35.0%
!! ATGGGTTTTAGTGTGAGAAA+AGG + chr8.1:33979320-33979339 MS.gene49497:CDS 35.0%
!! ATTAATTTGTTGGGAGAACG+GGG - chr8.1:33979790-33979809 None:intergenic 35.0%
!! GATCAGAAAATGGGTTTTTG+GGG - chr8.1:33981353-33981372 None:intergenic 35.0%
!! GGATCAGAAAATGGGTTTTT+GGG - chr8.1:33981354-33981373 None:intergenic 35.0%
!! GTGACTTTTCTTTCTAGTAC+TGG - chr8.1:33983526-33983545 None:intergenic 35.0%
!! TAAAGTGTTTCTGGAGAGTA+TGG + chr8.1:33982339-33982358 MS.gene49497:intron 35.0%
!! TGGGTTTTAGTGTGAGAAAA+GGG + chr8.1:33979321-33979340 MS.gene49497:CDS 35.0%
!!! TGATTGTTTTGGAGATGTTG+TGG + chr8.1:33982177-33982196 MS.gene49497:intron 35.0%
AAGTGTTAGGGATTTAGCTG+AGG - chr8.1:33980953-33980972 None:intergenic 40.0%
AATGTATCACAAGCCAAAGG+TGG + chr8.1:33979596-33979615 MS.gene49497:CDS 40.0%
ACAAGCTTCAGGATCATAAG+TGG + chr8.1:33982602-33982621 MS.gene49497:CDS 40.0%
ATCATCTGATGTCGAAGTTG+GGG - chr8.1:33980797-33980816 None:intergenic 40.0%
ATGTTCATCATTCAACCCGT+TGG - chr8.1:33980652-33980671 None:intergenic 40.0%
CAACTAATGCATCATGCAAG+TGG + chr8.1:33980500-33980519 MS.gene49497:intron 40.0%
CATGTTGACCATCCAAAACA+AGG - chr8.1:33983320-33983339 None:intergenic 40.0%
CATTACATCCGCAATTGCTT+TGG - chr8.1:33982413-33982432 None:intergenic 40.0%
CCATTCACTAGTATGCTACA+AGG + chr8.1:33983928-33983947 MS.gene49497:CDS 40.0%
CCTCGTCAAGCAAAAACAAA+AGG + chr8.1:33983495-33983514 MS.gene49497:CDS 40.0%
CCTTGTAGCATACTAGTGAA+TGG - chr8.1:33983931-33983950 None:intergenic 40.0%
CTCAACAGATTATGTGGAAG+TGG + chr8.1:33983349-33983368 MS.gene49497:CDS 40.0%
GAAACAGAAAATGCTGTCAC+TGG + chr8.1:33981211-33981230 MS.gene49497:intron 40.0%
GAGTTGGGTGAGAAAAGAAA+AGG - chr8.1:33981744-33981763 None:intergenic 40.0%
GATTCAAATGCAACGACCAA+TGG + chr8.1:33983423-33983442 MS.gene49497:CDS 40.0%
GGTTGAATGATGAACATTCC+AGG + chr8.1:33980655-33980674 MS.gene49497:intron 40.0%
GTATCATCTGATGTCGAAGT+TGG - chr8.1:33980799-33980818 None:intergenic 40.0%
GTGATTAGGGGATCAGAAAA+TGG - chr8.1:33981363-33981382 None:intergenic 40.0%
GTTGAATGCTAAGCATTCCA+GGG + chr8.1:33980538-33980557 MS.gene49497:intron 40.0%
GTTTATCATTCACCTGTTGG+GGG - chr8.1:33980611-33980630 None:intergenic 40.0%
GTTTCCAATTGCATGGACAA+AGG + chr8.1:33983741-33983760 MS.gene49497:CDS 40.0%
TAGATCGCAGCAAATGTCTT+TGG - chr8.1:33979571-33979590 None:intergenic 40.0%
TGATTCAAGAACAGACTGCA+AGG + chr8.1:33979457-33979476 MS.gene49497:CDS 40.0%
TGCATACTCACAATTGTTGG+GGG - chr8.1:33980688-33980707 None:intergenic 40.0%
TGCTGAATTAAGGTAAGGGT+GGG - chr8.1:33981573-33981592 None:intergenic 40.0%
TGTTCATCATTCAACCCGTT+GGG - chr8.1:33980651-33980670 None:intergenic 40.0%
TTGCTGAATTAAGGTAAGGG+TGG - chr8.1:33981574-33981593 None:intergenic 40.0%
TTGGAGAGAAAACCTAGAAG+AGG - chr8.1:33981646-33981665 None:intergenic 40.0%
! AATGAATATCTTGAGGGTGC+TGG + chr8.1:33982934-33982953 MS.gene49497:CDS 40.0%
! CTAGGGCTCTGATACATATT+AGG - chr8.1:33980090-33980109 None:intergenic 40.0%
! GGATTTAGCTGAGGTGTTTA+TGG - chr8.1:33980944-33980963 None:intergenic 40.0%
! GGCTCTGATACATATTAGGA+TGG - chr8.1:33980086-33980105 None:intergenic 40.0%
! GTCTTTTATAGCACCATCTC+AGG + chr8.1:33983782-33983801 MS.gene49497:CDS 40.0%
! TGTTACTTGGAGGTAACCAA+TGG - chr8.1:33984077-33984096 None:intergenic 40.0%
! TTGATTGGCTCAAGTGTCTA+GGG - chr8.1:33980107-33980126 None:intergenic 40.0%
!! ATGATGGCTTGTAGGTTGAT+TGG - chr8.1:33980122-33980141 None:intergenic 40.0%
!! CGTTTGGTGTTGCTGAATTA+AGG - chr8.1:33981583-33981602 None:intergenic 40.0%
!! GGGATCAGAAAATGGGTTTT+TGG - chr8.1:33981355-33981374 None:intergenic 40.0%
!! GGTGTTGCTGAATTAAGGTA+AGG - chr8.1:33981578-33981597 None:intergenic 40.0%
!! TTGATTTGTGCTCCCTTTGT+TGG + chr8.1:33982235-33982254 MS.gene49497:intron 40.0%
!!! ACGAATGTGTTTTGGAGAGA+TGG + chr8.1:33982136-33982155 MS.gene49497:intron 40.0%
!!! ATGGGTTTTTGGGGTGAAAA+TGG - chr8.1:33981344-33981363 None:intergenic 40.0%
!!! CCTTTTGTTTTTGCTTGACG+AGG - chr8.1:33983498-33983517 None:intergenic 40.0%
AATAGCGTACCTGTTCCAGA+GGG + chr8.1:33981263-33981282 MS.gene49497:intron 45.0%
AGAGCCTTTGTCCATGCAAT+TGG - chr8.1:33983748-33983767 None:intergenic 45.0%
AGCAAATGTCTTTGGTCTGG+TGG - chr8.1:33979563-33979582 None:intergenic 45.0%
AGCTAGGAAGGAATCGATTG+CGG - chr8.1:33981614-33981633 None:intergenic 45.0%
AGGCAACATATACGCAGAAG+GGG + chr8.1:33980165-33980184 MS.gene49497:intron 45.0%
AGGGATCTAGCAACTACCAT+TGG + chr8.1:33984058-33984077 MS.gene49497:intron 45.0%
ATGTGGAAGTGGCTTGATGT+TGG + chr8.1:33983360-33983379 MS.gene49497:CDS 45.0%
CATTACCTGCACATTACCCA+CGG + chr8.1:33980139-33980158 MS.gene49497:intron 45.0%
CGTTGAATGCTAAGCATTCC+AGG + chr8.1:33980537-33980556 MS.gene49497:intron 45.0%
GAGGCAACATATACGCAGAA+GGG + chr8.1:33980164-33980183 MS.gene49497:intron 45.0%
GGCGTTACATGCCAAATCTT+TGG + chr8.1:33982036-33982055 MS.gene49497:intron 45.0%
GGGTAATGTGCAGGTAATGA+TGG - chr8.1:33980138-33980157 None:intergenic 45.0%
GTACAACAACGCATCTACCT+CGG + chr8.1:33982749-33982768 MS.gene49497:CDS 45.0%
GTTCATCATTCAACCCGTTG+GGG - chr8.1:33980650-33980669 None:intergenic 45.0%
TAAGCCCCCAACAATTTGGA+TGG + chr8.1:33980563-33980582 MS.gene49497:intron 45.0%
TAATAGCGTACCTGTTCCAG+AGG + chr8.1:33981262-33981281 MS.gene49497:intron 45.0%
TACAGATCAAGATGCAGCCA+TGG + chr8.1:33982387-33982406 MS.gene49497:CDS 45.0%
TTCATCATTCAACCCGTTGG+GGG - chr8.1:33980649-33980668 None:intergenic 45.0%
TTGCTGGTGTTTATAACGCG+CGG - chr8.1:33982859-33982878 None:intergenic 45.0%
! AGCTTGTTCCAAAGTCTTGC+TGG - chr8.1:33982875-33982894 None:intergenic 45.0%
! ATTCCTTCCTAGCTCTCTCT+TGG + chr8.1:33981620-33981639 MS.gene49497:intron 45.0%
! CATTCGTCAAACGCGACTTT+TGG - chr8.1:33982123-33982142 None:intergenic 45.0%
! CGCGTTTGACGAATGTGTTT+TGG + chr8.1:33982128-33982147 MS.gene49497:intron 45.0%
! GTTGATTGGCTCAAGTGTCT+AGG - chr8.1:33980108-33980127 None:intergenic 45.0%
! TGCAGGTAATGATGGCTTGT+AGG - chr8.1:33980130-33980149 None:intergenic 45.0%
! TGGATGGTTAAAGCATCCCA+GGG + chr8.1:33980579-33980598 MS.gene49497:intron 45.0%
! TTGGATGGTTAAAGCATCCC+AGG + chr8.1:33980578-33980597 MS.gene49497:intron 45.0%
!! TAAAATATTAGAATAAAAAT+GGG + chr8.1:33982014-33982033 MS.gene49497:intron 5.0%
!!! ATTTATTAATATTAATTTGT+TGG - chr8.1:33979800-33979819 None:intergenic 5.0%
!!! TTTATTAATATTAATTTGTT+GGG - chr8.1:33979799-33979818 None:intergenic 5.0%
AAGAACAGACTGCAAGGCGA+TGG + chr8.1:33979463-33979482 MS.gene49497:CDS 50.0%
AGCATTCAACGCGCGTAGAT+TGG - chr8.1:33980528-33980547 None:intergenic 50.0%
AGCCATGGCCAAAGCAATTG+CGG + chr8.1:33982402-33982421 MS.gene49497:CDS 50.0%
AGCTATTTGGGGGAAGAGGT+AGG + chr8.1:33979668-33979687 MS.gene49497:CDS 50.0%
ATCCGCAATTGCTTTGGCCA+TGG - chr8.1:33982407-33982426 None:intergenic 50.0%
CAATGATCCGGAAAGGGAAG+TGG + chr8.1:33979421-33979440 MS.gene49497:CDS 50.0%
CGAGGCAACATATACGCAGA+AGG + chr8.1:33980163-33980182 MS.gene49497:intron 50.0%
CGCAGCAAATGTCTTTGGTC+TGG - chr8.1:33979566-33979585 None:intergenic 50.0%
GATTGCGGTAGCTTGACGTT+TGG - chr8.1:33981599-33981618 None:intergenic 50.0%
GGCATAAGCCCCCAACAATT+TGG + chr8.1:33980559-33980578 MS.gene49497:intron 50.0%
GGTAAAGAAGTGGCGGCAAT+TGG + chr8.1:33982795-33982814 MS.gene49497:CDS 50.0%
GTATATGTTGCCTCGACCGT+GGG - chr8.1:33980158-33980177 None:intergenic 50.0%
TATTTGGGGGAAGAGGTAGG+TGG + chr8.1:33979671-33979690 MS.gene49497:CDS 50.0%
TCGCTATTAGCGTAACCCTC+TGG - chr8.1:33981281-33981300 None:intergenic 50.0%
TTGGAGCTATTTGGGGGAAG+AGG + chr8.1:33979664-33979683 MS.gene49497:CDS 50.0%
!! GAATATCTTGAGGGTGCTGG+TGG + chr8.1:33982937-33982956 MS.gene49497:CDS 50.0%
!! TCGAGTTATCGGTGTCGTTG+TGG - chr8.1:33980360-33980379 None:intergenic 50.0%
!! TTAGCGTAACCCTCTGGAAC+AGG - chr8.1:33981275-33981294 None:intergenic 50.0%
AGGCCAAGAGAGAGCTAGGA+AGG - chr8.1:33981626-33981645 None:intergenic 55.0%
ATTGTTGGGGGCTTATGCCC+TGG - chr8.1:33980558-33980577 None:intergenic 55.0%
CGTATATGTTGCCTCGACCG+TGG - chr8.1:33980159-33980178 None:intergenic 55.0%
CTGGTGTTTATAACGCGCGG+AGG - chr8.1:33982856-33982875 None:intergenic 55.0%
GAAGAGGCCAAGAGAGAGCT+AGG - chr8.1:33981630-33981649 None:intergenic 55.0%
GCGGCAATTGGAGAGTGAGA+AGG + chr8.1:33982807-33982826 MS.gene49497:CDS 55.0%
GCTCTCTCTTGGCCTCTTCT+AGG + chr8.1:33981631-33981650 MS.gene49497:intron 55.0%
TCGTACGCCACTTCCCTTTC+CGG - chr8.1:33979431-33979450 None:intergenic 55.0%
! GGTCTGGTGGTGCAAAGTCA+TGG - chr8.1:33979550-33979569 None:intergenic 55.0%
! TGGGAGAACGGGGTGTTACA+GGG - chr8.1:33979780-33979799 None:intergenic 55.0%
! TTGGGAGAACGGGGTGTTAC+AGG - chr8.1:33979781-33979800 None:intergenic 55.0%
CTCGACCGTGGGTAATGTGC+AGG - chr8.1:33980147-33980166 None:intergenic 60.0%
CTGCACATTACCCACGGTCG+AGG + chr8.1:33980145-33980164 MS.gene49497:intron 60.0%
CTGTTGGGGGCTTATGCCCT+GGG - chr8.1:33980598-33980617 None:intergenic 60.0%
TCCAGGGCATAAGCCCCCAA+CGG + chr8.1:33980554-33980573 MS.gene49497:intron 60.0%
CCAGGGCATAAGCCCCCAAC+AGG + chr8.1:33980555-33980574 MS.gene49497:intron 65.0%
CCAGGGCATAAGCCCCCAAC+GGG + chr8.1:33980555-33980574 MS.gene49497:intron 65.0%
CCTGTTGGGGGCTTATGCCC+TGG - chr8.1:33980599-33980618 None:intergenic 65.0%
CCCGTTGGGGGCTTATGCCC+TGG - chr8.1:33980637-33980656 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 33979203 33984131 33979203 ID=MS.gene49497
chr8.1 mRNA 33979203 33984131 33979203 ID=MS.gene49497.t1;Parent=MS.gene49497
chr8.1 exon 33979203 33979707 33979203 ID=MS.gene49497.t1.exon1;Parent=MS.gene49497.t1
chr8.1 CDS 33979203 33979707 33979203 ID=cds.MS.gene49497.t1;Parent=MS.gene49497.t1
chr8.1 exon 33982344 33982511 33982344 ID=MS.gene49497.t1.exon2;Parent=MS.gene49497.t1
chr8.1 CDS 33982344 33982511 33982344 ID=cds.MS.gene49497.t1;Parent=MS.gene49497.t1
chr8.1 exon 33982548 33983591 33982548 ID=MS.gene49497.t1.exon3;Parent=MS.gene49497.t1
chr8.1 CDS 33982548 33983591 33982548 ID=cds.MS.gene49497.t1;Parent=MS.gene49497.t1
chr8.1 exon 33983682 33983803 33983682 ID=MS.gene49497.t1.exon4;Parent=MS.gene49497.t1
chr8.1 CDS 33983682 33983803 33983682 ID=cds.MS.gene49497.t1;Parent=MS.gene49497.t1
chr8.1 exon 33983877 33983978 33983877 ID=MS.gene49497.t1.exon5;Parent=MS.gene49497.t1
chr8.1 CDS 33983877 33983978 33983877 ID=cds.MS.gene49497.t1;Parent=MS.gene49497.t1
chr8.1 exon 33984060 33984131 33984060 ID=MS.gene49497.t1.exon6;Parent=MS.gene49497.t1
chr8.1 CDS 33984060 33984131 33984060 ID=cds.MS.gene49497.t1;Parent=MS.gene49497.t1
Gene Sequence

>MS.gene49497

ATGGAGGAAAATGAATGTCAGTATGTTGAAATTAAAGAGTCCAAAGATATATTTGTTGGTCAAGTTGTGTCTAGTAAAGATGAAGCATATAGCTTATATCAACAACATGCCTTCAAAATGGGTTTTAGTGTGAGAAAAGGGAAGGAATGTTATTATGATAATGAGAAAAAGAACACACGTTTGAAGTATTTTTATTGTTCCAAACAAGGGTTTAAGAACAATGATCCGGAAAGGGAAGTGGCGTACGAAAGATCTGATTCAAGAACAGACTGCAAGGCGATGGTGCAATTCAATGTAAGCAAAGATGGAGTATGGAAAATTACAAAGTTGGTAAAAGAACATAACCATGACTTTGCACCACCAGACCAAAGACATTTGCTGCGATCTATGAGAAATGTATCACAAGCCAAAGGTGGTCTTATAAAATCTATGGTGAATTCTGGTATAAAGGTTACAAATATTTGGAGCTATTTGGGGGAAGAGGTAGGTGGATTTGATAATCTTGGTATGACGATGAAAGATGTGCACAATTTTGTCTACACTGAAAAGTCAAAATTAATTGAAGCAGGGGATGCCCTGTAACACCCCGTTCTCCCAACAAATTAATATTAATAAATAAAATCAGAGTAATCACACAACGGAGTGTCACACTACTTTTCAAAATTTCATAATAGAAAATTGTCTATTTATTTAAAAACCGACATTTAAATTATCTTACAAACTGCAGCGGAATAATTCTTTAAAATATAAATTCAACCAAATTCAACATCAATAAAAGTCTTGGCATAAGGCCACAACATAATTCAACTTTATTCTAATAGCAAGTCTTTTCCAAAATATGTGATACATAAAAGAAATGAGAAGACACTCGCGACGATCCCCATCCTAATATGTATCAGAGCCCTAGACACTTGAGCCAATCAACCTACAAGCCATCATTACCTGCACATTACCCACGGTCGAGGCAACATATACGCAGAAGGGGTGAGAAACTTATCCAATAATGATAATATATAATTCATCAAATTAATGAAAATAACAGTATATCACAACATGCATCATTAATAATGTATATAAAGAATACATATAACAACGACATAATCATTTTCGGCAACAAGGTACAACAACAACAACAACAACAACAACAACATTATCCACAACGACACCGATAACTCGACAATTCGACAACGACAACAACTCGACAATACTACAACGACAACAACAACTCAACAATGCTACGACAACAACAACTCAACAATGCTACGACAACAACAACTCAACAATGCTACGACAACAACAACTAATGCATCATGCAAGTGGTACCAATCTACGCGCGTTGAATGCTAAGCATTCCAGGGCATAAGCCCCCAACAATTTGGATGGTTAAAGCATCCCAGGGCATAAGCCCCCAACAGGTGAATGATAAACATTCCAGGGCATAAGCCCCCAACGGGTTGAATGATGAACATTCCAGGGCATAAGCCCCCAACAATTGTGAGTATGCAAATGGACTCAACTTGTGTATATCAACATACAACTTCAACAGCGACTGCAACAACAACATATGTGCCTAAAACAATTATGACACACTCCCCAACTTCGACATCAGATGATACAACGACATCAACAACGGAAATCAACAACATAACATATATATAAATCAATTACATTCATCTCAAAGTCTAAAACATCCCCCAAAAGCAATTAAGTTTTGATCAATAGAACATAAGTCAAATATCCATAAACACCTCAGCTAAATCCCTAACACTTAAGTTTGAAGTTGGGAAACCAACCATAAGTTTTTGGACTAACTAGAGATTAATTATGCTAAGTTTTCTTAAAATTTTCTGAAGACCCACTTGGACTATTTTCATCATAACTCTAAATCTACAAATAATTTTCTAGTCACTCCAAAGCCATTAGAAAGCTAACTCAATTATCTACAACTTTTATGTTTACACCTAAAGCTAATTCAAAATAGAAACGGGTGAAAAAGACACAAGAACGCGAAACAGAAAATGCTGTCACTGGACAATTTCGCTAATAGCGAAAATTGAGCTAATAGCGTACCTGTTCCAGAGGGTTACGCTAATAGCGAATTTCTGGCGAGTTTTTCATCTACTGTTACGATTTTAACACCATTTTCACCCCAAAAACCCATTTTCTGATCCCCTAATCACCCAAAATGAATTAGAACAATGTTTACAGGTTCTATATACAACATAGTAACTAAAACAACATAGAAACATGCATCAAACAACACCATTCATCATATTTTCTTCAATTAACATAAAACTTCTAACCCTAAAACCAAGAACAACAATTCATCAAATTTCAGAATTATATACCATGATTATTGAAAGGAATCCCACCCTTACCTTAATTCAGCAACACCAAACGTCAAGCTACCGCAATCGATTCCTTCCTAGCTCTCTCTTGGCCTCTTCTAGGTTTTCTCTCCAAAACCAGTTTTCTTCTAATGTTTTTACGTGAAAATGTTTCTCTCCCTTTTTCTTTCTTTTACTTCAAAAATATCTCCCTTTTCTTTTCTCACCCAACTCCCTTAATTTCTATTAATTTCCACTTAATTCCCCTTAACCAAAAATAAATACTATTTCTATAATATTTCTATTTCTCATATTATTTCTATCCAATAATAACAACATTCATTTAAATAATACACAACCCCAATATTCATATAATAAATAGCATCATAACATATTTCATATAAAAATCATATAAAACATATATTTCACATAAAATCATATATATATAGCAATTAAAGTCATATAAAAATATTTACACCTCTACTAAAATATTAGAATAAAAATGGGGCGTTACATGCCAAATCTTTGGTGAATAACTTACGAAATAGACAAGCACATGATGCCATGTTCTACTATAGTGTGCAATTAGACCAAAAGTCGCGTTTGACGAATGTGTTTTGGAGAGATGGCAAGTCCAAAGTTGATTATGATTGTTTTGGAGATGTTGTGGTTTTTGATACCACTTACCGAACAAATAAATATGATTTGATTTGTGCTCCCTTTGTTGGTGTGAATCATCATTGGCAAAATGTCATGTTTGGTTGTGCATTGTTATTAGATGAATCCTCAACTTCCTTTAATTGGTTGTTTAAAGTGTTTCTGGAGAGTATGGGAGACAAACAACCAAAAACAATCTTTACAGATCAAGATGCAGCCATGGCCAAAGCAATTGCGGATGTAATGCCAAAAACAAATCATCGATTATGTTTGTGGCATATTTCTAAAAATGCTCCTTCTCATTTAGGTGATCTAAAATCTGACCGTAAGTTTCAAAGTTTGTTGAATCAATGCATGTCAGGCTGTGACTCAGAAGAAGAATTTGAAAACACTTGGGCTGAGATGATAAATGAGTACAAGCTTCAGGATCATAAGTGGTTGAAAAGTATGTACAAAATTCGTCACAAATGGAGCACTGCATATAGCAAGAGTGTATTCTCTGCAGACATCAAGTCATCTCAGAGAAGTGAGAGTACAAATAGTGTATTAGGTGAAATTGCAAGTACAACAACGCATCTACCTCGGTTTTTATTAGAATTTGAGAAAATGGTAAAGAAGTGGCGGCAATTGGAGAGTGAGAAGGAATTCAAAAATAGTCAAAGCAAGCCTCCGCGCGTTATAAACACCAGCAAGACTTTGGAACAAGCTTCTATGATATATACTCACGAACTTTTCAAACGCTTTTCGAATGAATATCTTGAGGGTGCTGGTGGAAGCACCTCTATAGAGATTCAAGTGTGTGATAATGTGTCATATCACGAAGTCATTTCGAATCGTACGCCTCATAAGAAGTATATCGTAGCACTTGACTCATCTAATGCAACAATCAATTGTAGCTGTCATAAGTTTGATTCTTTAGGAATTCTTTGTAGTCATGCTTTGCGAATTTACAACATCAAAGGTATTTTAAGAATACCTGATCAATACTTTTTGAAACGATGGTCAAAAAAAGCAAGATCTGTGATTTATGAGCATACTTGTGAAGGTTCAAAAGAAACTGAAAATGAAATGTCTAATAGTGATGAGGCTGCTATTCTTTATCGCAGTGCCATCATGAAGTCATTTTATAACCTTGTTTTGGATGGTCAACATGATAAAGAAGCTCAACAGATTATGTGGAAGTGGCTTGATGTTGGAGTTGAGCGTGTTCAACAACATTTCAGTAATCTCAATGTAGATTCAAATGCAACGACCAATGGGAAAATTGTTGATGAAAAGGAGGATAATGAGACTGTTGAAATTTTGAATCCTCGTCAAGCAAAAACAAAAGGAATGTCCAGTACTAGAAAGAAAAGTCACTTTGAGACAAGGAAAAGATTAGCTACAAAAGTCAAGCAAAATAAATGTGAGGAATTGTATTGATTTTTTAATTAGATTATCATTATTTTTTGATCTGTTAGTACATGATTTTGTTAATTTTTTGATTTAGCATCAGTGAAACAAAAAGGCATTCAACTTTGTGCTACTAATTCTTCAATGGGGTGTCCTTCTAATGTTTCCAATTGCATGGACAAAGGCTCTAATGTTCTAGATATGTCTTTTATAGCACCATCTCAGGTTTCTATTTTTGGCAATCCATTCTTAATAAGTTATATATAACATTATAATGTTGTTTTATATCCTTTGATAGGAATATCATTCTGTTAATTCCTCAAATTGGAGTTTTAACTCATCATCAATTCCATTCACTAGTATGCTACAAGGAATGAGTTCATATGGTCATTTAAGCCAGGTATACAAATGATCAATATATAATTGTGATTACATGTTTCATATAGTTAGAGATATGCTAAATCACTTCTTTTTATTGCAGGGATCTAGCAACTACCATTGGTTACCTCCAAGTAACATTCTTCAAGATAGACAAGAAGCCAAAAGAATTTAG
Protein sequence

>MS.gene49497.t1

MEENECQYVEIKESKDIFVGQVVSSKDEAYSLYQQHAFKMGFSVRKGKECYYDNEKKNTRLKYFYCSKQGFKNNDPEREVAYERSDSRTDCKAMVQFNVSKDGVWKITKLVKEHNHDFAPPDQRHLLRSMRNVSQAKGGLIKSMVNSGIKVTNIWSYLGEEVGGFDNLVFLESMGDKQPKTIFTDQDAAMAKAIADVMPKTNHRLCLWHISKNAPSHLGDLKSDRCDSEEEFENTWAEMINEYKLQDHKWLKSMYKIRHKWSTAYSKSVFSADIKSSQRSESTNSVLGEIASTTTHLPRFLLEFEKMVKKWRQLESEKEFKNSQSKPPRVINTSKTLEQASMIYTHELFKRFSNEYLEGAGGSTSIEIQVCDNVSYHEVISNRTPHKKYIVALDSSNATINCSCHKFDSLGILCSHALRIYNIKGILRIPDQYFLKRWSKKARSVIYEHTCEGSKETENEMSNSDEAAILYRSAIMKSFYNLVLDGQHDKEAQQIMWKWLDVGVERVQQHFSNLNVDSNATTNGKIVDEKEDNETVEILNPRQAKTKGMSSTRKKSHFETRKRLATKVKQNKLKQKGIQLCATNSSMGCPSNVSNCMDKGSNVLDMSFIAPSQEYHSVNSSNWSFNSSSIPFTSMLQGMSSYGHLSQGSSNYHWLPPSNILQDRQEAKRI