AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49710.t1 MTR_8g094580 92.150 293 9 5 1 287 1 285 0.0 540
MS.gene49710.t1 MTR_8g094580 90.377 239 9 5 55 287 1 231 3.10e-152 425
MS.gene49710.t1 MTR_3g096920 69.024 297 69 7 1 284 1 287 3.06e-134 382
MS.gene49710.t1 MTR_3g096920 61.261 333 71 7 1 284 1 324 3.93e-128 367
MS.gene49710.t1 MTR_3g088110 63.087 298 87 7 1 287 1 286 4.90e-120 345
MS.gene49710.t1 MTR_2157s0010 66.258 163 46 3 7 160 8 170 1.79e-75 231
MS.gene49710.t1 MTR_2g079990 67.702 161 47 2 5 164 14 170 3.28e-75 234
MS.gene49710.t1 MTR_2g080010 67.683 164 39 3 7 158 15 176 4.21e-75 233
MS.gene49710.t1 MTR_7g085220 55.072 207 77 3 7 198 8 213 3.48e-74 231
MS.gene49710.t1 MTR_8g059170 68.944 161 47 2 5 164 12 170 5.80e-73 227
MS.gene49710.t1 MTR_5g041940 64.103 156 55 1 5 159 1 156 2.15e-72 223
MS.gene49710.t1 MTR_4g081870 62.658 158 58 1 3 159 5 162 1.53e-71 221
MS.gene49710.t1 MTR_4g089135 64.000 175 41 3 6 158 14 188 1.82e-71 224
MS.gene49710.t1 MTR_2g093810 54.545 187 72 2 7 190 14 190 4.79e-70 219
MS.gene49710.t1 MTR_2g079990 58.378 185 52 2 5 164 14 198 7.08e-70 221
MS.gene49710.t1 MTR_7g100990 55.738 183 77 2 5 183 9 191 8.93e-70 219
MS.gene49710.t1 MTR_2g064090 38.486 317 154 9 5 284 4 316 4.25e-59 192
MS.gene49710.t1 MTR_5g040420 40.506 237 120 6 7 225 14 247 1.01e-56 187
MS.gene49710.t1 MTR_8g467490 53.165 158 66 3 9 158 16 173 1.28e-55 184
MS.gene49710.t1 MTR_6g011860 50.292 171 66 3 6 163 14 178 1.24e-54 182
MS.gene49710.t1 MTR_6g012670 54.777 157 68 2 5 160 18 172 4.97e-54 178
MS.gene49710.t1 MTR_3g070030 50.877 171 82 2 5 174 17 186 8.22e-54 179
MS.gene49710.t1 MTR_6g084430 52.795 161 65 3 7 164 5 157 1.11e-53 177
MS.gene49710.t1 MTR_6g477900 53.503 157 66 4 7 160 6 158 1.27e-53 174
MS.gene49710.t1 MTR_4g108760 53.659 164 67 3 5 164 15 173 1.47e-53 178
MS.gene49710.t1 MTR_3g109340 52.469 162 68 2 7 165 22 177 1.67e-52 175
MS.gene49710.t1 MTR_3g109340 52.469 162 69 3 7 165 22 178 2.86e-52 175
MS.gene49710.t1 MTR_8g076110 50.311 161 70 3 7 163 6 160 3.96e-52 173
MS.gene49710.t1 MTR_4g036030 46.703 182 85 4 1 176 1 176 4.98e-52 174
MS.gene49710.t1 MTR_5g090970 51.205 166 72 3 9 165 20 185 7.30e-52 172
MS.gene49710.t1 MTR_3g435150 54.194 155 68 2 5 158 14 166 9.46e-52 172
MS.gene49710.t1 MTR_5g076850 54.037 161 67 4 5 162 4 160 1.33e-51 179
MS.gene49710.t1 MTR_7g085260 51.205 166 74 2 4 164 14 177 1.45e-51 174
MS.gene49710.t1 MTR_3g064580 54.658 161 67 3 5 162 4 161 1.51e-51 179
MS.gene49710.t1 MTR_1g008740 51.534 163 70 4 7 165 27 184 2.60e-51 172
MS.gene49710.t1 MTR_4g134460 53.247 154 64 2 9 160 56 203 2.74e-51 174
MS.gene49710.t1 MTR_1g008740 51.534 163 70 4 7 165 13 170 2.77e-51 172
MS.gene49710.t1 MTR_5g012080 45.405 185 90 4 1 179 1 180 5.81e-51 171
MS.gene49710.t1 MTR_2g078700 54.140 157 63 3 7 158 23 175 6.46e-51 172
MS.gene49710.t1 MTR_5g014300 49.153 177 70 4 3 169 2 168 8.56e-51 170
MS.gene49710.t1 MTR_7g011120 49.133 173 78 4 5 169 6 176 1.05e-50 169
MS.gene49710.t1 MTR_4g101680 47.674 172 79 4 1 167 1 166 1.47e-50 171
MS.gene49710.t1 MTR_7g005280 55.280 161 58 5 3 159 11 161 2.41e-50 167
MS.gene49710.t1 MTR_2g062730 48.837 172 75 4 1 165 2 167 2.44e-50 169
MS.gene49710.t1 MTR_5g090970 51.205 166 71 4 9 165 20 184 3.87e-50 168
MS.gene49710.t1 MTR_7g011130 48.045 179 77 4 5 169 17 193 6.06e-50 169
MS.gene49710.t1 MTR_5g021710 51.592 157 66 3 7 159 8 158 6.26e-50 168
MS.gene49710.t1 MTR_2g068880 42.922 219 107 7 9 213 24 238 8.53e-50 167
MS.gene49710.t1 MTR_1g069805 46.739 184 84 4 7 185 10 184 8.98e-50 166
MS.gene49710.t1 MTR_4g035590 50.318 157 67 3 7 159 8 157 1.38e-48 165
MS.gene49710.t1 MTR_2g068920 42.081 221 108 6 9 214 23 238 1.87e-48 163
MS.gene49710.t1 MTR_6g032770 51.592 157 71 2 5 158 16 170 5.30e-48 164
MS.gene49710.t1 MTR_1g096430 42.857 189 92 4 7 185 7 189 1.15e-47 162
MS.gene49710.t1 MTR_7g097090 50.000 154 66 2 7 157 10 155 4.13e-47 159
MS.gene49710.t1 MTR_2g064470 42.925 212 102 6 6 212 10 207 6.15e-47 159
MS.gene49710.t1 MTR_4g098630 49.412 170 75 5 1 164 1 165 1.83e-46 159
MS.gene49710.t1 MTR_8g099750 45.977 174 88 3 2 171 9 180 3.50e-46 155
MS.gene49710.t1 MTR_8g024480 44.186 172 87 3 1 163 9 180 1.45e-45 159
MS.gene49710.t1 MTR_5g069030 51.572 159 66 4 6 159 24 176 7.49e-45 160
MS.gene49710.t1 MTR_3g116070 57.364 129 51 2 7 131 23 151 7.58e-45 155
MS.gene49710.t1 MTR_3g096140 45.860 157 78 3 7 160 7 159 3.96e-44 151
MS.gene49710.t1 MTR_3g098810 48.780 164 75 3 3 159 10 171 7.31e-44 149
MS.gene49710.t1 MTR_3g096140 45.860 157 78 3 7 160 7 159 2.38e-43 151
MS.gene49710.t1 MTR_3g093050 49.682 157 68 4 7 158 22 172 1.51e-42 154
MS.gene49710.t1 MTR_3g093050 49.682 157 68 4 7 158 22 172 2.09e-42 154
MS.gene49710.t1 MTR_1g097300 47.097 155 75 4 9 160 21 171 1.07e-41 151
MS.gene49710.t1 MTR_1g090723 44.186 172 88 5 9 176 10 177 2.65e-41 150
MS.gene49710.t1 MTR_0036s0150 44.624 186 93 6 4 185 2 181 5.28e-41 149
MS.gene49710.t1 MTR_3g093040 45.283 159 76 4 5 158 106 258 8.40e-41 144
MS.gene49710.t1 MTR_1g090723 44.186 172 87 5 9 176 10 176 1.06e-40 149
MS.gene49710.t1 MTR_8g063550 43.038 158 83 3 6 160 5 158 1.17e-40 144
MS.gene49710.t1 MTR_1g090723 44.186 172 87 5 9 176 10 176 1.47e-40 149
MS.gene49710.t1 MTR_8g063550 43.038 158 83 3 6 160 5 158 1.88e-40 145
MS.gene49710.t1 MTR_8g063550 43.038 158 83 3 6 160 5 158 3.00e-40 145
MS.gene49710.t1 MTR_3g070040 44.242 165 88 2 11 174 12 173 6.56e-40 142
MS.gene49710.t1 MTR_4g075980 44.654 159 75 4 9 163 17 166 1.10e-39 140
MS.gene49710.t1 MTR_1g090720 44.199 181 89 4 7 182 42 215 1.57e-39 144
MS.gene49710.t1 MTR_3g098810 48.387 155 73 2 3 152 10 162 1.87e-39 136
MS.gene49710.t1 MTR_2g086880 45.161 155 72 4 3 155 14 157 3.27e-39 144
MS.gene49710.t1 MTR_2g086880 45.161 155 72 4 3 155 14 157 4.27e-39 143
MS.gene49710.t1 MTR_8g023840 47.436 156 66 6 6 155 10 155 1.04e-37 137
MS.gene49710.t1 MTR_8g093580 41.139 158 86 3 6 160 5 158 2.11e-37 138
MS.gene49710.t1 MTR_4g052620 40.936 171 92 5 7 170 5 173 4.37e-36 130
MS.gene49710.t1 MTR_7g105170 32.035 231 136 7 7 225 4 225 8.87e-36 129
MS.gene49710.t1 MTR_2g086690 34.959 246 134 10 8 236 5 241 3.06e-34 125
MS.gene49710.t1 MTR_4g094302 41.401 157 79 3 7 158 11 159 3.48e-34 123
MS.gene49710.t1 MTR_3g096140 42.553 141 74 3 23 160 2 138 3.52e-34 127
MS.gene49710.t1 MTR_4g094302 46.094 128 58 2 7 131 11 130 6.60e-32 116
MS.gene49710.t1 MTR_8g023860 40.252 159 71 6 7 155 12 156 9.03e-32 122
MS.gene49710.t1 MTR_8g023930 40.000 165 75 6 7 161 24 174 1.74e-30 119
MS.gene49710.t1 MTR_8g093790 42.073 164 70 6 2 164 5 144 2.09e-30 113
MS.gene49710.t1 MTR_8g023900 40.881 159 70 6 10 158 196 340 3.50e-30 118
MS.gene49710.t1 MTR_8g023900 39.412 170 86 7 7 168 12 172 1.38e-29 117
MS.gene49710.t1 MTR_8g023880 35.955 178 80 8 1 158 1 164 1.16e-23 97.4
MS.gene49710.t1 MTR_3g096400 32.727 165 96 5 1 156 1 159 4.83e-23 94.4
MS.gene49710.t1 MTR_7g070140 54.667 75 31 1 60 131 17 91 3.86e-21 87.4
MS.gene49710.t1 MTR_7g083330 31.387 137 87 4 2 134 13 146 9.49e-18 79.7
MS.gene49710.t1 MTR_7g083360 31.343 134 85 4 5 134 8 138 1.44e-17 78.2
MS.gene49710.t1 MTR_7g083370 29.771 131 85 4 6 132 9 136 1.09e-15 72.8
MS.gene49710.t1 MTR_7g116460 31.977 172 98 8 13 174 11 173 7.62e-12 63.5
MS.gene49710.t1 MTR_7g070150 44.928 69 30 3 101 168 7 68 1.51e-11 60.1
MS.gene49710.t1 MTR_8g102240 32.468 154 75 7 5 132 45 195 6.74e-11 62.8
MS.gene49710.t1 MTR_8g102240 32.468 154 75 7 5 132 45 195 6.75e-11 62.8
MS.gene49710.t1 MTR_4g088245 29.861 144 83 5 7 133 68 210 8.04e-11 62.0
MS.gene49710.t1 MTR_4g078875 30.345 145 82 5 7 133 48 191 8.48e-11 61.6
MS.gene49710.t1 MTR_8g069160 29.861 144 83 5 7 133 68 210 9.54e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49710.t1 AT1G01720 62.759 290 102 5 1 287 1 287 9.58e-120 345
MS.gene49710.t1 AT5G08790 63.542 288 76 8 1 280 1 267 9.60e-117 337
MS.gene49710.t1 AT5G63790 60.473 296 70 9 1 286 44 302 1.44e-109 320
MS.gene49710.t1 AT5G63790 60.959 292 67 9 1 282 54 308 1.76e-109 320
MS.gene49710.t1 AT1G77450 60.153 261 59 7 5 262 8 226 3.10e-96 284
MS.gene49710.t1 AT1G69490 54.369 206 88 3 7 211 9 209 8.03e-76 232
MS.gene49710.t1 AT1G52890 67.702 161 47 2 5 164 12 168 2.05e-74 230
MS.gene49710.t1 AT3G15500 66.867 166 48 3 5 167 12 173 5.79e-74 229
MS.gene49710.t1 AT4G27410 64.162 173 57 2 5 176 12 180 1.31e-73 228
MS.gene49710.t1 AT1G61110 65.663 166 47 2 3 158 12 177 1.09e-71 224
MS.gene49710.t1 AT3G04070 64.596 161 48 2 7 158 10 170 7.96e-70 219
MS.gene49710.t1 AT3G04070 61.582 177 43 4 7 158 10 186 1.51e-69 219
MS.gene49710.t1 AT4G27410 58.421 190 57 3 5 176 12 197 4.12e-69 217
MS.gene49710.t1 AT3G15510 65.839 161 39 4 11 158 21 178 4.67e-67 213
MS.gene49710.t1 AT1G52880 65.409 159 42 3 11 158 21 177 1.40e-62 200
MS.gene49710.t1 AT5G61430 55.414 157 67 2 5 160 14 168 2.05e-56 185
MS.gene49710.t1 AT5G39610 53.846 169 70 3 5 172 18 179 3.47e-56 182
MS.gene49710.t1 AT5G07680 56.129 155 65 2 5 158 15 167 1.01e-55 183
MS.gene49710.t1 AT5G07680 56.129 155 65 2 5 158 1 153 1.27e-55 182
MS.gene49710.t1 AT3G18400 54.375 160 65 3 7 164 5 158 2.56e-55 181
MS.gene49710.t1 AT1G26870 51.807 166 60 3 7 158 16 175 2.78e-55 184
MS.gene49710.t1 AT5G39820 48.000 175 71 3 9 163 22 196 1.21e-54 180
MS.gene49710.t1 AT1G76420 54.777 157 63 4 7 160 22 173 2.18e-54 179
MS.gene49710.t1 AT3G29035 47.716 197 90 4 5 198 22 208 3.00e-54 179
MS.gene49710.t1 AT5G62380 47.027 185 88 3 1 181 1 179 7.78e-54 179
MS.gene49710.t1 AT5G62380 47.027 185 88 3 1 181 1 179 7.78e-54 179
MS.gene49710.t1 AT2G33480 54.717 159 62 3 2 159 10 159 9.00e-54 176
MS.gene49710.t1 AT3G04060 51.445 173 74 3 2 169 15 182 9.54e-54 178
MS.gene49710.t1 AT2G33480 55.346 159 63 4 2 159 10 161 1.70e-53 175
MS.gene49710.t1 AT3G17730 52.866 157 67 3 7 160 6 158 4.31e-53 173
MS.gene49710.t1 AT3G03200 54.140 157 66 3 5 158 4 157 4.69e-53 180
MS.gene49710.t1 AT2G24430 52.469 162 69 3 7 165 16 172 4.73e-53 176
MS.gene49710.t1 AT2G24430 52.469 162 69 3 7 165 16 172 4.73e-53 176
MS.gene49710.t1 AT5G17260 54.140 157 66 3 5 158 4 157 8.70e-52 176
MS.gene49710.t1 AT2G43000 51.656 151 69 2 9 158 20 167 1.88e-51 170
MS.gene49710.t1 AT5G53950 53.416 161 58 3 7 158 17 169 2.35e-51 173
MS.gene49710.t1 AT2G02450 52.597 154 65 2 9 160 53 200 3.52e-51 172
MS.gene49710.t1 AT2G02450 52.597 154 65 2 9 160 53 200 4.68e-51 173
MS.gene49710.t1 AT3G15170 50.299 167 66 3 7 164 20 178 4.76e-51 170
MS.gene49710.t1 AT5G13180 55.000 160 61 3 3 159 10 161 7.13e-51 168
MS.gene49710.t1 AT1G12260 49.693 163 72 3 1 159 1 157 8.81e-51 171
MS.gene49710.t1 AT1G62700 49.080 163 73 3 1 159 1 157 1.74e-50 171
MS.gene49710.t1 AT1G62700 49.080 163 73 3 1 159 1 157 1.74e-50 171
MS.gene49710.t1 AT5G18270 52.469 162 61 3 5 158 19 172 1.87e-50 169
MS.gene49710.t1 AT5G18270 52.469 162 61 3 5 158 19 172 2.11e-50 169
MS.gene49710.t1 AT1G12260 49.693 163 72 3 1 159 1 157 2.38e-50 171
MS.gene49710.t1 AT4G36160 51.250 160 68 3 4 159 11 164 3.03e-50 170
MS.gene49710.t1 AT4G36160 51.250 160 68 3 4 159 7 160 3.17e-50 170
MS.gene49710.t1 AT4G36160 51.250 160 68 3 4 159 7 160 3.17e-50 170
MS.gene49710.t1 AT5G46590 51.875 160 70 4 3 158 2 158 3.18e-50 167
MS.gene49710.t1 AT2G18060 49.689 161 71 3 4 160 6 160 4.53e-50 169
MS.gene49710.t1 AT2G18060 49.689 161 71 3 4 160 6 160 4.53e-50 169
MS.gene49710.t1 AT1G79580 47.619 168 76 3 3 165 13 173 5.68e-50 169
MS.gene49710.t1 AT1G79580 47.619 168 76 3 3 165 13 173 5.68e-50 169
MS.gene49710.t1 AT1G79580 47.619 168 76 3 3 165 13 173 5.68e-50 169
MS.gene49710.t1 AT1G79580 47.619 168 76 3 3 165 13 173 5.68e-50 169
MS.gene49710.t1 AT1G79580 47.619 168 76 3 3 165 13 173 5.68e-50 169
MS.gene49710.t1 AT1G56010 49.432 176 82 4 6 177 18 190 6.61e-50 167
MS.gene49710.t1 AT3G10490 46.703 182 84 4 4 182 24 195 9.41e-50 165
MS.gene49710.t1 AT4G17980 51.553 161 71 4 3 158 2 160 1.29e-49 165
MS.gene49710.t1 AT4G10350 48.256 172 81 3 7 174 9 176 1.49e-49 167
MS.gene49710.t1 AT4G17980 51.553 161 71 4 3 158 2 160 1.49e-49 166
MS.gene49710.t1 AT1G54330 51.534 163 69 3 5 164 4 159 2.97e-49 165
MS.gene49710.t1 AT1G71930 49.359 156 69 3 7 158 9 158 3.39e-49 166
MS.gene49710.t1 AT1G71930 49.359 156 69 3 7 158 9 158 3.39e-49 166
MS.gene49710.t1 AT3G10480 46.448 183 85 4 3 182 23 195 8.29e-49 168
MS.gene49710.t1 AT1G33280 48.193 166 75 3 7 168 8 166 1.41e-48 164
MS.gene49710.t1 AT1G65910 51.205 166 71 4 5 164 4 165 1.46e-48 171
MS.gene49710.t1 AT3G12977 50.327 153 72 2 7 158 18 167 1.58e-48 163
MS.gene49710.t1 AT5G66300 49.080 163 74 3 4 162 9 166 1.59e-48 163
MS.gene49710.t1 AT5G46590 53.472 144 63 2 3 142 2 145 1.90e-48 162
MS.gene49710.t1 AT3G10480 46.995 183 83 5 3 182 23 194 2.38e-48 167
MS.gene49710.t1 AT3G61910 39.500 200 108 3 1 187 5 204 4.00e-48 163
MS.gene49710.t1 AT1G32510 46.073 191 89 4 1 181 1 187 7.41e-48 161
MS.gene49710.t1 AT3G10490 46.703 182 84 4 4 182 24 195 7.73e-48 166
MS.gene49710.t1 AT2G46770 44.767 172 82 3 1 159 10 181 2.78e-47 162
MS.gene49710.t1 AT1G33060 43.415 205 101 5 7 208 24 216 3.06e-46 164
MS.gene49710.t1 AT1G33060 43.415 205 101 5 7 208 24 216 3.26e-46 164
MS.gene49710.t1 AT5G24590 49.682 157 71 3 7 159 13 165 4.11e-46 161
MS.gene49710.t1 AT4G35580 52.229 157 64 4 7 158 9 159 6.59e-46 162
MS.gene49710.t1 AT4G28530 46.821 173 63 4 6 158 9 172 6.63e-46 158
MS.gene49710.t1 AT4G35580 52.229 157 64 4 7 158 9 159 7.34e-46 162
MS.gene49710.t1 AT1G32770 44.118 170 85 3 1 160 10 179 7.85e-46 158
MS.gene49710.t1 AT4G35580 52.229 157 64 4 7 158 9 159 1.14e-45 161
MS.gene49710.t1 AT3G10480 40.741 216 82 5 3 182 23 228 6.60e-45 159
MS.gene49710.t1 AT3G49530 44.571 175 89 3 7 177 13 183 7.19e-45 157
MS.gene49710.t1 AT3G10500 49.045 157 73 3 7 160 9 161 1.02e-44 159
MS.gene49710.t1 AT3G49530 44.571 175 89 3 7 177 13 183 2.31e-44 157
MS.gene49710.t1 AT3G12910 48.315 178 76 7 2 165 17 192 7.33e-44 151
MS.gene49710.t1 AT5G04410 47.771 157 75 3 7 160 9 161 3.23e-43 155
MS.gene49710.t1 AT1G34180 43.860 171 89 3 9 176 18 184 3.56e-43 153
MS.gene49710.t1 AT2G17040 47.097 155 67 4 9 158 8 152 1.65e-42 147
MS.gene49710.t1 AT1G34180 43.860 171 89 3 9 176 18 184 2.42e-42 153
MS.gene49710.t1 AT1G34180 41.530 183 88 3 9 176 18 196 6.32e-41 147
MS.gene49710.t1 AT1G34190 43.275 171 90 3 9 176 18 184 6.36e-41 149
MS.gene49710.t1 AT5G09330 44.720 161 82 4 3 160 2 158 1.23e-40 147
MS.gene49710.t1 AT5G09330 44.720 161 82 4 3 160 2 158 1.23e-40 147
MS.gene49710.t1 AT5G09330 44.720 161 82 4 3 160 2 158 1.23e-40 147
MS.gene49710.t1 AT5G09330 44.720 161 82 4 3 160 2 158 1.23e-40 147
MS.gene49710.t1 AT5G09330 44.720 161 82 4 3 160 2 158 1.23e-40 147
MS.gene49710.t1 AT3G44290 33.898 236 125 7 9 239 16 225 2.39e-40 140
MS.gene49710.t1 AT1G34180 41.530 183 88 3 9 176 18 196 3.83e-40 147
MS.gene49710.t1 AT2G27300 45.033 151 70 3 7 155 14 153 3.04e-39 140
MS.gene49710.t1 AT5G64060 40.678 177 98 4 3 176 2 174 4.68e-39 140
MS.gene49710.t1 AT3G44290 34.061 229 120 7 9 232 16 218 5.72e-39 139
MS.gene49710.t1 AT5G22290 42.857 154 74 4 9 159 23 165 7.45e-38 137
MS.gene49710.t1 AT1G32870 50.314 159 68 5 7 160 10 162 3.09e-37 138
MS.gene49710.t1 AT1G32870 50.314 159 68 5 7 160 10 162 3.37e-37 138
MS.gene49710.t1 AT1G32870 50.314 159 68 5 7 160 46 198 4.06e-37 139
MS.gene49710.t1 AT5G61430 57.009 107 43 2 55 160 1 105 9.74e-35 127
MS.gene49710.t1 AT1G56010 49.606 127 58 3 55 178 1 124 2.04e-33 123
MS.gene49710.t1 AT5G22380 34.538 249 126 11 4 237 2 228 3.83e-33 121
MS.gene49710.t1 AT3G44350 38.983 177 87 8 6 170 4 171 8.46e-33 121
MS.gene49710.t1 AT5G64530 39.205 176 82 4 5 167 1 164 1.24e-32 119
MS.gene49710.t1 AT2G33480 56.436 101 39 3 60 159 8 104 4.69e-32 118
MS.gene49710.t1 AT5G04395 40.816 147 70 3 6 135 27 173 2.01e-31 115
MS.gene49710.t1 AT3G12977 50.926 108 49 2 52 158 10 114 3.04e-31 116
MS.gene49710.t1 AT3G44350 38.509 161 79 6 6 151 4 159 3.15e-31 114
MS.gene49710.t1 AT4G10350 50.000 116 53 2 60 174 18 129 1.12e-30 117
MS.gene49710.t1 AT5G64530 45.385 130 56 3 5 131 1 118 5.09e-30 111
MS.gene49710.t1 AT4G28530 37.059 170 47 3 6 158 9 135 7.24e-29 112
MS.gene49710.t1 AT4G01520 32.338 201 114 6 8 195 5 196 1.58e-26 105
MS.gene49710.t1 AT4G01550 40.769 130 70 3 10 132 7 136 1.85e-26 108
MS.gene49710.t1 AT4G01540 32.663 199 112 6 10 195 7 196 2.00e-25 104
MS.gene49710.t1 AT4G01540 32.663 199 112 6 10 195 7 196 2.33e-25 104
MS.gene49710.t1 AT4G01540 32.663 199 112 6 10 195 7 196 3.16e-25 104
MS.gene49710.t1 AT4G01540 32.663 199 112 6 10 195 7 196 3.92e-25 104
MS.gene49710.t1 AT3G04420 40.769 130 72 3 5 129 1 130 1.07e-23 98.2
MS.gene49710.t1 AT3G04420 40.769 130 72 3 5 129 1 130 2.76e-23 97.8
MS.gene49710.t1 AT1G02230 36.296 135 75 4 8 134 4 135 1.76e-22 95.9
MS.gene49710.t1 AT2G43000 47.253 91 44 2 69 158 2 89 3.52e-22 92.0
MS.gene49710.t1 AT5G14000 36.000 150 91 3 1 147 9 156 1.68e-21 89.0
MS.gene49710.t1 AT5G14000 33.742 163 96 4 1 160 9 162 3.16e-21 89.4
MS.gene49710.t1 AT3G10490 45.192 104 46 3 80 182 2 95 1.53e-20 90.5
MS.gene49710.t1 AT3G10490 45.192 104 46 3 80 182 2 95 1.53e-20 90.5
MS.gene49710.t1 AT1G02220 33.333 165 93 5 5 164 1 153 2.98e-20 90.1
MS.gene49710.t1 AT3G56530 34.395 157 87 6 7 156 52 199 3.00e-20 89.0
MS.gene49710.t1 AT1G02250 38.462 130 69 4 8 129 4 130 1.20e-19 88.2
MS.gene49710.t1 AT1G01010 34.532 139 74 5 5 129 1 136 3.72e-17 81.3
MS.gene49710.t1 AT3G55210 31.953 169 90 7 4 156 8 167 4.32e-16 77.0
MS.gene49710.t1 AT2G18060 46.753 77 34 2 85 160 2 72 1.97e-15 75.1
MS.gene49710.t1 AT5G50820 33.577 137 74 6 4 133 14 140 9.21e-14 68.9
MS.gene49710.t1 AT4G29230 33.117 154 73 8 7 133 48 198 2.57e-11 64.3
MS.gene49710.t1 AT4G29230 33.117 154 73 8 7 133 47 197 2.59e-11 64.3
MS.gene49710.t1 AT5G22290 42.105 76 31 3 86 159 2 66 2.69e-11 62.8
MS.gene49710.t1 AT4G29230 33.117 154 73 8 7 133 48 198 4.75e-11 63.2
MS.gene49710.t1 AT3G04430 32.836 134 71 6 13 130 6 136 6.51e-11 60.8

Find 79 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCAATTTCTTTGATAAT+AGG 0.219498 4.4:+7976736 None:intergenic
TGAAAATCAAAGGCTGAAAC+TGG 0.273975 4.4:+7975888 None:intergenic
GGGCTGCGGGAACCGGATAT+TGG 0.287906 4.4:-7976505 MS.gene49710:CDS
TTGATAATAGGAACAGCTAT+AGG 0.303758 4.4:+7976748 None:intergenic
TTCTTTATCCCAAGTGCCTT+CGG 0.348007 4.4:+7976449 None:intergenic
TTTACAGAAATGGCTCTTTA+CGG 0.351320 4.4:-7976593 MS.gene49710:intron
TTTGATCCATGGCATCTTCC+AGG 0.357407 4.4:-7976706 MS.gene49710:intron
AATAACAAATTAAATTTACT+TGG 0.360188 4.4:+7975764 None:intergenic
AACCCGAAAATTGATTCATT+TGG 0.363530 4.4:+7975811 None:intergenic
AAGTGGAATGAATTTGTATT+GGG 0.373773 4.4:-7975918 MS.gene49710:CDS
ATTAATTGCAGCTTGATGAT+TGG 0.376520 4.4:-7976193 MS.gene49710:intron
GAAAATATCCAAACGGTTCA+AGG 0.382217 4.4:-7976535 MS.gene49710:CDS
CCGAACCGGGCTGCGGGAAC+CGG 0.391909 4.4:-7976512 MS.gene49710:CDS
CCAAAGGAATTAAAACCAAT+TGG 0.402035 4.4:-7976397 MS.gene49710:CDS
CGGTTCGGCCTTGAACCGTT+TGG 0.403070 4.4:+7976527 None:intergenic
TTAATTGCAGCTTGATGATT+GGG 0.410149 4.4:-7976192 MS.gene49710:intron
CCGGTTCCCGCAGCCCGGTT+CGG 0.410215 4.4:+7976512 None:intergenic
TCAAAGGCTGAAACTGGGTC+TGG 0.410879 4.4:+7975894 None:intergenic
CAAGTGGAATGAATTTGTAT+TGG 0.415048 4.4:-7975919 MS.gene49710:CDS
TGTCGAATTTACAACAAGAA+AGG 0.430099 4.4:-7976164 MS.gene49710:CDS
TACTGATCCTGAGGGGCAAA+AGG 0.435530 4.4:+7975834 None:intergenic
CAAATTAAATTTACTTGGGC+AGG 0.439187 4.4:+7975769 None:intergenic
CAAACGGTTCAAGGCCGAAC+CGG 0.440323 4.4:-7976526 MS.gene49710:CDS
TTCAAGGCCGAACCGGGCTG+CGG 0.445265 4.4:-7976519 MS.gene49710:CDS
CAATACAAATTCATTCCACT+TGG 0.450741 4.4:+7975920 None:intergenic
TGATAATAGGAACAGCTATA+GGG 0.457703 4.4:+7976749 None:intergenic
TCCGGTCGCCTTCCAATATC+CGG 0.478603 4.4:+7976493 None:intergenic
TCAAGGCCGAACCGGGCTGC+GGG 0.480914 4.4:-7976518 MS.gene49710:CDS
TCCAATCGGCTTATCAGCTC+CGG 0.481369 4.4:+7976475 None:intergenic
CGTGGTTTCACCGTGCGATA+AGG 0.482787 4.4:-7975958 MS.gene49710:CDS
CAGTTGAATCTTATGGATGA+TGG 0.485236 4.4:-7975867 MS.gene49710:CDS
CAAAGGCTGAAACTGGGTCT+GGG 0.487541 4.4:+7975895 None:intergenic
ATTGGAAAGCCGAAGGCACT+TGG 0.488594 4.4:-7976458 MS.gene49710:CDS
GTCGAATTTACAACAAGAAA+GGG 0.491222 4.4:-7976163 MS.gene49710:CDS
ATACTCGTGCATGATCCAAT+TGG 0.497532 4.4:+7976382 None:intergenic
TTCATTTGGTACTGATCCTG+AGG 0.513979 4.4:+7975825 None:intergenic
CACTATTCCTAAAATCATCC+TGG 0.521129 4.4:+7976048 None:intergenic
AATATCCGGTTCCCGCAGCC+CGG 0.524402 4.4:+7976507 None:intergenic
AGTGCCTTCGGCTTTCCAAT+CGG 0.524558 4.4:+7976461 None:intergenic
ATTTGTATAAGTTTGATCCA+TGG 0.528456 4.4:-7976717 MS.gene49710:CDS
AAACGGTTCAAGGCCGAACC+GGG 0.528831 4.4:-7976525 MS.gene49710:CDS
TCAGATCAAGATGAACGGCC+AGG 0.532358 4.4:-7976066 MS.gene49710:CDS
GTCGGGTGAAATCTGAAGCC+AGG 0.534952 4.4:+7976820 None:intergenic
GTACACTGACACATCAGATT+CGG 0.536856 4.4:-7976018 MS.gene49710:CDS
TGGCCGTTCATCTTGATCTG+AGG 0.540560 4.4:+7976068 None:intergenic
ACCGGATATTGGAAGGCGAC+CGG 0.540712 4.4:-7976494 MS.gene49710:CDS
TGCGGGAACCGGATATTGGA+AGG 0.555135 4.4:-7976501 MS.gene49710:CDS
ATAACAAATTAAATTTACTT+GGG 0.555352 4.4:+7975765 None:intergenic
TGACAAGCTCATCATCAGTC+GGG 0.555923 4.4:+7976803 None:intergenic
ACCGGAGCTGATAAGCCGAT+TGG 0.556049 4.4:-7976476 MS.gene49710:CDS
ACTGATCCTGAGGGGCAAAA+GGG 0.560321 4.4:+7975835 None:intergenic
GCTTCCTCAGAAAACATTGG+TGG 0.561789 4.4:+7976113 None:intergenic
CTCTTTACGGTGAGAAAGAG+TGG 0.566657 4.4:-7976580 MS.gene49710:CDS
AAGATTCAACTGAAAATCAA+AGG 0.566776 4.4:+7975878 None:intergenic
ATGTACATACTCTTAAATTG+TGG 0.566838 4.4:+7976321 None:intergenic
CTCAAGCGGTTCTGAGCACG+TGG 0.568997 4.4:-7975976 MS.gene49710:CDS
TGAGCTTCCTCAGAAAACAT+TGG 0.577453 4.4:+7976110 None:intergenic
ATTGAATATACGCGAATGCA+AGG 0.577743 4.4:-7976859 None:intergenic
TAAGTACCTGGAAGATGCCA+TGG 0.577977 4.4:+7976700 None:intergenic
CTTTGAACTTCCTTATCGCA+CGG 0.587532 4.4:+7975948 None:intergenic
TTGACAAGCTCATCATCAGT+CGG 0.594991 4.4:+7976802 None:intergenic
AGGGATCGAAAATATCCAAA+CGG 0.596645 4.4:-7976542 MS.gene49710:CDS
GAAAATCAAAGGCTGAAACT+GGG 0.599958 4.4:+7975889 None:intergenic
AATACAAATTCATTCCACTT+GGG 0.602517 4.4:+7975921 None:intergenic
ACACATCAGATTCGGTGCCA+CGG 0.603238 4.4:-7976010 MS.gene49710:CDS
TCATTTGGTACTGATCCTGA+GGG 0.603683 4.4:+7975826 None:intergenic
AAGTTCAAAGTGAGCCCAAG+TGG 0.609329 4.4:-7975935 MS.gene49710:CDS
TTGGAAAGCCGAAGGCACTT+GGG 0.610579 4.4:-7976457 MS.gene49710:CDS
CGGTTTCACACCGACTCAAG+CGG 0.614416 4.4:-7975990 MS.gene49710:CDS
GTGCTCAGAACCGCTTGAGT+CGG 0.630980 4.4:+7975980 None:intergenic
CTTGAGTCGGTGTGAAACCG+TGG 0.640274 4.4:+7975993 None:intergenic
AATAGGAACAGCTATAGGGA+GGG 0.642151 4.4:+7976753 None:intergenic
GGAGCATTAGAATTACCACC+TGG 0.643311 4.4:-7976838 MS.gene49710:CDS
TAATAGGAACAGCTATAGGG+AGG 0.649675 4.4:+7976752 None:intergenic
TATGCTGGCAAAGCTCCCAA+AGG 0.653423 4.4:-7976413 MS.gene49710:CDS
AAACCTCAGATCAAGATGAA+CGG 0.656051 4.4:-7976071 MS.gene49710:CDS
TAAGCCGATTGGAAAGCCGA+AGG 0.696583 4.4:-7976465 MS.gene49710:CDS
GGGTGAAATCTGAAGCCAGG+TGG 0.722817 4.4:+7976823 None:intergenic
CATTTGGTACTGATCCTGAG+GGG 0.747553 4.4:+7975827 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAATAAAATAAAATAGATT+TGG + chr4.4:7976332-7976351 None:intergenic 10.0%
!!! AAATCAATTTCTTTGATAAT+AGG + chr4.4:7975890-7975909 None:intergenic 15.0%
!!! ATATTTTAATGCTAATTATG+TGG - chr4.4:7975994-7976013 MS.gene49710:CDS 15.0%
!!! TCTTAAATTGTGGTTATTTT+TGG + chr4.4:7976295-7976314 None:intergenic 20.0%
! AAGATTCAACTGAAAATCAA+AGG + chr4.4:7976748-7976767 None:intergenic 25.0%
! AAGTGGAATGAATTTGTATT+GGG - chr4.4:7976705-7976724 MS.gene49710:intron 25.0%
! AATACAAATTCATTCCACTT+GGG + chr4.4:7976705-7976724 None:intergenic 25.0%
! ATGTACATACTCTTAAATTG+TGG + chr4.4:7976305-7976324 None:intergenic 25.0%
! ATTTGTATAAGTTTGATCCA+TGG - chr4.4:7975906-7975925 MS.gene49710:CDS 25.0%
! GTTGTATGTATTTACAGAAA+TGG - chr4.4:7976020-7976039 MS.gene49710:CDS 25.0%
!! GTACCAAATGAATCAATTTT+CGG - chr4.4:7976809-7976828 MS.gene49710:CDS 25.0%
!! TACCAAATGAATCAATTTTC+GGG - chr4.4:7976810-7976829 MS.gene49710:CDS 25.0%
!! TGATTTTCAGTTGAATCTTA+TGG - chr4.4:7976749-7976768 MS.gene49710:CDS 25.0%
!!! CAATTGGTTTTAATTCCTTT+GGG + chr4.4:7976228-7976247 None:intergenic 25.0%
ATCATCAAGCTGCAATTAAT+CGG + chr4.4:7976430-7976449 None:intergenic 30.0%
CAAGTGGAATGAATTTGTAT+TGG - chr4.4:7976704-7976723 MS.gene49710:intron 30.0%
CAATACAAATTCATTCCACT+TGG + chr4.4:7976706-7976725 None:intergenic 30.0%
CCAAAGGAATTAAAACCAAT+TGG - chr4.4:7976226-7976245 MS.gene49710:intron 30.0%
GAAAATAAAGAGTAAGTACC+TGG + chr4.4:7975938-7975957 None:intergenic 30.0%
GTCGAATTTACAACAAGAAA+GGG - chr4.4:7976460-7976479 MS.gene49710:CDS 30.0%
TGATAATAGGAACAGCTATA+GGG + chr4.4:7975877-7975896 None:intergenic 30.0%
TGTCGAATTTACAACAAGAA+AGG - chr4.4:7976459-7976478 MS.gene49710:CDS 30.0%
TTTACAGAAATGGCTCTTTA+CGG - chr4.4:7976030-7976049 MS.gene49710:CDS 30.0%
! AACCCGAAAATTGATTCATT+TGG + chr4.4:7976815-7976834 None:intergenic 30.0%
! ATTAATTGCAGCTTGATGAT+TGG - chr4.4:7976430-7976449 MS.gene49710:CDS 30.0%
! TTAATTGCAGCTTGATGATT+GGG - chr4.4:7976431-7976450 MS.gene49710:CDS 30.0%
! TTGATAATAGGAACAGCTAT+AGG + chr4.4:7975878-7975897 None:intergenic 30.0%
!!! AAATGAATCAATTTTCGGGT+TGG - chr4.4:7976814-7976833 MS.gene49710:CDS 30.0%
!!! ATTGTGGTTATTTTTGGAAG+CGG + chr4.4:7976289-7976308 None:intergenic 30.0%
!!! CCAATTGGTTTTAATTCCTT+TGG + chr4.4:7976229-7976248 None:intergenic 30.0%
AAACCTCAGATCAAGATGAA+CGG - chr4.4:7976552-7976571 MS.gene49710:CDS 35.0%
AGGGATCGAAAATATCCAAA+CGG - chr4.4:7976081-7976100 MS.gene49710:CDS 35.0%
CACTATTCCTAAAATCATCC+TGG + chr4.4:7976578-7976597 None:intergenic 35.0%
CAGTTGAATCTTATGGATGA+TGG - chr4.4:7976756-7976775 MS.gene49710:CDS 35.0%
GAAAATATCCAAACGGTTCA+AGG - chr4.4:7976088-7976107 MS.gene49710:CDS 35.0%
GAAAATCAAAGGCTGAAACT+GGG + chr4.4:7976737-7976756 None:intergenic 35.0%
TGAAAATCAAAGGCTGAAAC+TGG + chr4.4:7976738-7976757 None:intergenic 35.0%
! TAAACCACCAATGTTTTCTG+AGG - chr4.4:7976506-7976525 MS.gene49710:CDS 35.0%
! TTTGGATATTTTCGATCCCT+TGG + chr4.4:7976081-7976100 None:intergenic 35.0%
!!! AGTGGTATTTTTTCTCTCCA+AGG - chr4.4:7976061-7976080 MS.gene49710:CDS 35.0%
!!! GTGGTATTTTTTCTCTCCAA+GGG - chr4.4:7976062-7976081 MS.gene49710:CDS 35.0%
AATAGGAACAGCTATAGGGA+GGG + chr4.4:7975873-7975892 None:intergenic 40.0%
ATACTCGTGCATGATCCAAT+TGG + chr4.4:7976244-7976263 None:intergenic 40.0%
CTTTGAACTTCCTTATCGCA+CGG + chr4.4:7976678-7976697 None:intergenic 40.0%
GTACACTGACACATCAGATT+CGG - chr4.4:7976605-7976624 MS.gene49710:intron 40.0%
TAATAGGAACAGCTATAGGG+AGG + chr4.4:7975874-7975893 None:intergenic 40.0%
TGAGCTTCCTCAGAAAACAT+TGG + chr4.4:7976516-7976535 None:intergenic 40.0%
TTCTTTATCCCAAGTGCCTT+CGG + chr4.4:7976177-7976196 None:intergenic 40.0%
TTGACAAGCTCATCATCAGT+CGG + chr4.4:7975824-7975843 None:intergenic 40.0%
!! AAAGCACTCGTTTTCTATGC+TGG - chr4.4:7976195-7976214 MS.gene49710:intron 40.0%
!! TCATTTGGTACTGATCCTGA+GGG + chr4.4:7976800-7976819 None:intergenic 40.0%
!! TTCATTTGGTACTGATCCTG+AGG + chr4.4:7976801-7976820 None:intergenic 40.0%
AAGTTCAAAGTGAGCCCAAG+TGG - chr4.4:7976688-7976707 MS.gene49710:intron 45.0%
CTCTTTACGGTGAGAAAGAG+TGG - chr4.4:7976043-7976062 MS.gene49710:CDS 45.0%
GCTTCCTCAGAAAACATTGG+TGG + chr4.4:7976513-7976532 None:intergenic 45.0%
TAAGTACCTGGAAGATGCCA+TGG + chr4.4:7975926-7975945 None:intergenic 45.0%
TGACAAGCTCATCATCAGTC+GGG + chr4.4:7975823-7975842 None:intergenic 45.0%
TTTGATCCATGGCATCTTCC+AGG - chr4.4:7975917-7975936 MS.gene49710:CDS 45.0%
! GGAGCATTAGAATTACCACC+TGG - chr4.4:7975785-7975804 MS.gene49710:CDS 45.0%
! TGAACGGCCAGGATGATTTT+AGG - chr4.4:7976568-7976587 MS.gene49710:CDS 45.0%
!! CATTTGGTACTGATCCTGAG+GGG + chr4.4:7976799-7976818 None:intergenic 45.0%
ACTGATCCTGAGGGGCAAAA+GGG + chr4.4:7976791-7976810 None:intergenic 50.0%
AGTGCCTTCGGCTTTCCAAT+CGG + chr4.4:7976165-7976184 None:intergenic 50.0%
CAAAGGCTGAAACTGGGTCT+GGG + chr4.4:7976731-7976750 None:intergenic 50.0%
TAAGCCGATTGGAAAGCCGA+AGG - chr4.4:7976158-7976177 MS.gene49710:CDS 50.0%
TACTGATCCTGAGGGGCAAA+AGG + chr4.4:7976792-7976811 None:intergenic 50.0%
TATGCTGGCAAAGCTCCCAA+AGG - chr4.4:7976210-7976229 MS.gene49710:intron 50.0%
TCAAAGGCTGAAACTGGGTC+TGG + chr4.4:7976732-7976751 None:intergenic 50.0%
TCAGATCAAGATGAACGGCC+AGG - chr4.4:7976557-7976576 MS.gene49710:CDS 50.0%
TGGCCGTTCATCTTGATCTG+AGG + chr4.4:7976558-7976577 None:intergenic 50.0%
! TCCAATCGGCTTATCAGCTC+CGG + chr4.4:7976151-7976170 None:intergenic 50.0%
!! ACACATCAGATTCGGTGCCA+CGG - chr4.4:7976613-7976632 MS.gene49710:intron 50.0%
!! ATTGGAAAGCCGAAGGCACT+TGG - chr4.4:7976165-7976184 MS.gene49710:CDS 50.0%
!! TTGGAAAGCCGAAGGCACTT+GGG - chr4.4:7976166-7976185 MS.gene49710:CDS 50.0%
AAACGGTTCAAGGCCGAACC+GGG - chr4.4:7976098-7976117 MS.gene49710:CDS 55.0%
ACCGGAGCTGATAAGCCGAT+TGG - chr4.4:7976147-7976166 MS.gene49710:CDS 55.0%
ACCGGATATTGGAAGGCGAC+CGG - chr4.4:7976129-7976148 MS.gene49710:CDS 55.0%
CAAACGGTTCAAGGCCGAAC+CGG - chr4.4:7976097-7976116 MS.gene49710:CDS 55.0%
CGTGGTTTCACCGTGCGATA+AGG - chr4.4:7976665-7976684 MS.gene49710:intron 55.0%
CTTGAGTCGGTGTGAAACCG+TGG + chr4.4:7976633-7976652 None:intergenic 55.0%
GTGCTCAGAACCGCTTGAGT+CGG + chr4.4:7976646-7976665 None:intergenic 55.0%
TCCGGTCGCCTTCCAATATC+CGG + chr4.4:7976133-7976152 None:intergenic 55.0%
TGCGGGAACCGGATATTGGA+AGG - chr4.4:7976122-7976141 MS.gene49710:CDS 55.0%
! AGATGACCCTTTTGCCCCTC+AGG - chr4.4:7976782-7976801 MS.gene49710:CDS 55.0%
! GGGTGAAATCTGAAGCCAGG+TGG + chr4.4:7975803-7975822 None:intergenic 55.0%
! GTCGGGTGAAATCTGAAGCC+AGG + chr4.4:7975806-7975825 None:intergenic 55.0%
!! CGGTTTCACACCGACTCAAG+CGG - chr4.4:7976633-7976652 MS.gene49710:intron 55.0%
AATATCCGGTTCCCGCAGCC+CGG + chr4.4:7976119-7976138 None:intergenic 60.0%
! CGGTTCGGCCTTGAACCGTT+TGG + chr4.4:7976099-7976118 None:intergenic 60.0%
!! CTCAAGCGGTTCTGAGCACG+TGG - chr4.4:7976647-7976666 MS.gene49710:intron 60.0%
GGGCTGCGGGAACCGGATAT+TGG - chr4.4:7976118-7976137 MS.gene49710:CDS 65.0%
TTCAAGGCCGAACCGGGCTG+CGG - chr4.4:7976104-7976123 MS.gene49710:CDS 65.0%
TCAAGGCCGAACCGGGCTGC+GGG - chr4.4:7976105-7976124 MS.gene49710:CDS 70.0%
CCGAACCGGGCTGCGGGAAC+CGG - chr4.4:7976111-7976130 MS.gene49710:CDS 75.0%
CCGGTTCCCGCAGCCCGGTT+CGG + chr4.4:7976114-7976133 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 7975779 7976866 7975779 ID=MS.gene49710
chr4.4 mRNA 7975779 7976866 7975779 ID=MS.gene49710.t1;Parent=MS.gene49710
chr4.4 exon 7976707 7976866 7976707 ID=MS.gene49710.t1.exon1;Parent=MS.gene49710.t1
chr4.4 CDS 7976707 7976866 7976707 ID=cds.MS.gene49710.t1;Parent=MS.gene49710.t1
chr4.4 exon 7976331 7976608 7976331 ID=MS.gene49710.t1.exon2;Parent=MS.gene49710.t1
chr4.4 CDS 7976331 7976608 7976331 ID=cds.MS.gene49710.t1;Parent=MS.gene49710.t1
chr4.4 exon 7975779 7976204 7975779 ID=MS.gene49710.t1.exon3;Parent=MS.gene49710.t1
chr4.4 CDS 7975779 7976204 7975779 ID=cds.MS.gene49710.t1;Parent=MS.gene49710.t1
Gene Sequence

>MS.gene49710

ATGCAAGGAGCATTAGAATTACCACCTGGCTTCAGATTTCACCCGACTGATGATGAGCTTGTCAATCACTACTTGTGTAGAAAGTGTGCTTCCCTCCCTATAGCTGTTCCTATTATCAAAGAAATTGATTTGTATAAGTTTGATCCATGGCATCTTCCAGGTACTTACTCTTTATTTTCTCATACAACATACACTTCTGATCGAAGACGTGTCTTATATTTTAATGCTAATTATGTGGTTTGTTGTATGTATTTACAGAAATGGCTCTTTACGGTGAGAAAGAGTGGTATTTTTTCTCTCCAAGGGATCGAAAATATCCAAACGGTTCAAGGCCGAACCGGGCTGCGGGAACCGGATATTGGAAGGCGACCGGAGCTGATAAGCCGATTGGAAAGCCGAAGGCACTTGGGATAAAGAAAGCACTCGTTTTCTATGCTGGCAAAGCTCCCAAAGGAATTAAAACCAATTGGATCATGCACGAGTATCGTCTTGCTAATGTTGATAGATCCGCTTCCAAAAATAACCACAATTTAAGAGTATGTACATTTCACCAAATCTATTTTATTTTATTTCTTGTGACATTGTAAACATCAATCATGTATGTGTATACTTTTTTTGTCAAAAATATTTTCAATGATCTAACAGTTACCGATTAATTGCAGCTTGATGATTGGGTCTTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAATACAATGACACTAAACCACCAATGTTTTCTGAGGAAGCTCAATTTGAGAATGAGACAAAACCTCAGATCAAGATGAACGGCCAGGATGATTTTAGGAATAGTGATCAATTGTACACTGACACATCAGATTCGGTGCCACGGTTTCACACCGACTCAAGCGGTTCTGAGCACGTGGTTTCACCGTGCGATAAGGAAGTTCAAAGTGAGCCCAAGTGGAATGAATTTGTATTGGGCCCAGACCCAGTTTCAGCCTTTGATTTTCAGTTGAATCTTATGGATGATGGTGAAGATGACCCTTTTGCCCCTCAGGATCAGTACCAAATGAATCAATTTTCGGGTTGGCAAGATGTGTTTATGTACCTGCCCAAGTAA
Protein sequence

>MS.gene49710.t1

MQGALELPPGFRFHPTDDELVNHYLCRKCASLPIAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASKNNHNLRLDDWVLCRIYNKKGKIEKYNDTKPPMFSEEAQFENETKPQIKMNGQDDFRNSDQLYTDTSDSVPRFHTDSSGSEHVVSPCDKEVQSEPKWNEFVLGPDPVSAFDFQLNLMDDGEDDPFAPQDQYQMNQFSGWQDVFMYLPK