Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49933.t1 | XP_013453051.1 | 97.8 | 358 | 8 | 0 | 1 | 358 | 1 | 358 | 1.20E-201 | 712.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49933.t1 | P70122 | 51.5 | 239 | 115 | 1 | 4 | 242 | 2 | 239 | 6.5e-63 | 242.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49933.t1 | A0A072UBA1 | 97.8 | 358 | 8 | 0 | 1 | 358 | 1 | 358 | 8.6e-202 | 712.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene49933.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49933.t1 | MTR_6g085170 | 97.765 | 358 | 8 | 0 | 1 | 358 | 1 | 358 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49933.t1 | AT1G43860 | 62.534 | 371 | 125 | 6 | 1 | 358 | 1 | 370 | 6.42e-167 | 470 |
| MS.gene49933.t1 | AT1G43860 | 57.391 | 345 | 124 | 7 | 27 | 358 | 1 | 335 | 1.02e-135 | 390 |
Find 79 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACGGATTCAGAAGTTCTT+TGG | 0.262575 | 6.4:-59238206 | None:intergenic |
| CACGGATTCAGAAGTTCTTT+GGG | 0.284543 | 6.4:-59238205 | None:intergenic |
| ACAGGCTCTGGAGTTGATTC+AGG | 0.285367 | 6.4:+59236747 | MS.gene49933:intron |
| TCATTCCAGTATTTGCTTAG+AGG | 0.304623 | 6.4:+59234169 | MS.gene49933:CDS |
| ATTGGAGCCTGGTCTGTATA+AGG | 0.329038 | 6.4:+59238059 | MS.gene49933:CDS |
| TGCTTCTTGGAGGTGCTGTT+TGG | 0.331667 | 6.4:-59236635 | None:intergenic |
| CAATGCTGTCTAGTCAGTTC+AGG | 0.331986 | 6.4:+59236504 | MS.gene49933:CDS |
| AGGTGTTCTTGCTAAGTCTA+AGG | 0.333707 | 6.4:+59234118 | MS.gene49933:CDS |
| ACCCTAACACCGTTCTTTCA+TGG | 0.342417 | 6.4:+59233944 | MS.gene49933:CDS |
| TTCACTCTCTTTATGTGGAT+GGG | 0.347184 | 6.4:+59238133 | MS.gene49933:CDS |
| CGCCATGAAAGAACGGTGTT+AGG | 0.353355 | 6.4:-59233946 | None:intergenic |
| GGAGGAAGTACCTATCCTTT+TGG | 0.369437 | 6.4:+59236831 | MS.gene49933:CDS |
| TTTAAAGAAAGGGGAACTTC+AGG | 0.373529 | 6.4:+59236460 | MS.gene49933:CDS |
| AGAAGAGTGCACAGCAGATA+TGG | 0.383434 | 6.4:+59238428 | MS.gene49933:CDS |
| GTTCACTCTCTTTATGTGGA+TGG | 0.384632 | 6.4:+59238132 | MS.gene49933:CDS |
| ACAAACCTCTAAGCAAATAC+TGG | 0.388442 | 6.4:-59234174 | None:intergenic |
| TACCACAATGTCTCGTTCAT+TGG | 0.388509 | 6.4:+59233837 | None:intergenic |
| TGAATCAAAATCTGATTTGA+AGG | 0.396855 | 6.4:+59238458 | MS.gene49933:CDS |
| AAAGGGGAACTTCAGGTTGC+TGG | 0.407398 | 6.4:+59236467 | MS.gene49933:CDS |
| ACCGTTCTTTCATGGCGTTC+CGG | 0.423741 | 6.4:+59233952 | MS.gene49933:CDS |
| AGGATAGGTACTTCCTCCTC+AGG | 0.427749 | 6.4:-59236826 | None:intergenic |
| TGTTGTCCCTCAGTAGGCTT+AGG | 0.430168 | 6.4:-59238273 | None:intergenic |
| TTGAAGATGCTAAGTTGTAC+AGG | 0.433138 | 6.4:+59238334 | MS.gene49933:CDS |
| TGTCCCTTCTTTAGAAATAA+CGG | 0.436135 | 6.4:-59236878 | None:intergenic |
| TCTTGTTCACTCTCTTTATG+TGG | 0.440257 | 6.4:+59238128 | MS.gene49933:CDS |
| TCAATCATGCTGATAGTGTA+AGG | 0.442974 | 6.4:-59236578 | None:intergenic |
| AAGGATTTGAATGCGGCGTT+TGG | 0.443098 | 6.4:+59234137 | MS.gene49933:CDS |
| CAAAAGCAAACAATTTCGTC+TGG | 0.443371 | 6.4:+59238249 | MS.gene49933:CDS |
| GTTCTTTGGGGCAATGGTGC+AGG | 0.443834 | 6.4:-59238192 | None:intergenic |
| TCAGAAGTTCTTTGGGGCAA+TGG | 0.449572 | 6.4:-59238198 | None:intergenic |
| AGGACAAGATACCTGCTTCT+TGG | 0.450486 | 6.4:-59236648 | None:intergenic |
| GCAACCGTTATTTCTAAAGA+AGG | 0.452079 | 6.4:+59236874 | MS.gene49933:CDS |
| TCACTCTCTTTATGTGGATG+GGG | 0.465028 | 6.4:+59238134 | MS.gene49933:CDS |
| GCAGCAGCGCGTACCCTCAA+TGG | 0.474471 | 6.4:-59236802 | None:intergenic |
| GTGCACTCTTCTTCAGATAG+TGG | 0.490526 | 6.4:-59238417 | None:intergenic |
| TTTGGTTGTTGTCCCTCAGT+AGG | 0.497330 | 6.4:-59238279 | None:intergenic |
| AGTGTAAGGGCGCTTAGTCT+CGG | 0.500797 | 6.4:-59236564 | None:intergenic |
| GCCATGAAAGAACGGTGTTA+GGG | 0.509375 | 6.4:-59233945 | None:intergenic |
| ACGCGCTGCTGCCCCTGAGG+AGG | 0.512519 | 6.4:+59236813 | MS.gene49933:CDS |
| ACAAGATACCTGCTTCTTGG+AGG | 0.519410 | 6.4:-59236645 | None:intergenic |
| GTGTAAGGGCGCTTAGTCTC+GGG | 0.522577 | 6.4:-59236563 | None:intergenic |
| CTATAAAACGGTGTCCATTG+AGG | 0.535043 | 6.4:+59236788 | MS.gene49933:CDS |
| AAACAGCACCTCCAAGAAGC+AGG | 0.539561 | 6.4:+59236637 | MS.gene49933:CDS |
| TGTTTGGATCAACAGCGAAA+TGG | 0.541879 | 6.4:-59236619 | None:intergenic |
| TATAAAACGGTGTCCATTGA+GGG | 0.542061 | 6.4:+59236789 | MS.gene49933:CDS |
| TGAAGTGTTGCAGTCACATA+CGG | 0.542659 | 6.4:+59234076 | MS.gene49933:CDS |
| AGAAGCACTACCCTATAAAA+CGG | 0.553845 | 6.4:+59236776 | MS.gene49933:CDS |
| AAAAGTCTTGTGCATTACAA+TGG | 0.555238 | 6.4:-59236537 | None:intergenic |
| AATGCTGTCTAGTCAGTTCA+GGG | 0.557997 | 6.4:+59236505 | MS.gene49933:CDS |
| GCTTGTGCCACTCACTCTTG+TGG | 0.558268 | 6.4:-59238362 | None:intergenic |
| CGTTCATTGGTTCAACCAGT+AGG | 0.559659 | 6.4:+59233850 | MS.gene49933:CDS |
| CAACCGTTATTTCTAAAGAA+GGG | 0.568663 | 6.4:+59236875 | MS.gene49933:CDS |
| GCATGATTGAACGCCTCATG+AGG | 0.570502 | 6.4:+59236591 | MS.gene49933:CDS |
| GGAAAAGCTGAGCGAGTGGA+AGG | 0.571341 | 6.4:+59236852 | MS.gene49933:CDS |
| TTTATCATTCAGCTCAAGCA+CGG | 0.574553 | 6.4:-59238223 | None:intergenic |
| TTTGTTATGAATAAGATGCA+TGG | 0.575041 | 6.4:+59238093 | MS.gene49933:CDS |
| CACTCTTCTTCAGATAGTGG+AGG | 0.576466 | 6.4:-59238414 | None:intergenic |
| GGATAGGTACTTCCTCCTCA+GGG | 0.584943 | 6.4:-59236825 | None:intergenic |
| GCCGGAACGCCATGAAAGAA+CGG | 0.596078 | 6.4:-59233953 | None:intergenic |
| GTTTATACGAATGTTTCGAA+AGG | 0.596420 | 6.4:+59234098 | MS.gene49933:CDS |
| TTCAGGTTGCTGGTAAAGAG+AGG | 0.599142 | 6.4:+59236477 | MS.gene49933:CDS |
| CAATCATGCTGATAGTGTAA+GGG | 0.615053 | 6.4:-59236577 | None:intergenic |
| TGAAGATGCTAAGTTGTACA+GGG | 0.615157 | 6.4:+59238335 | MS.gene49933:CDS |
| AGTCTTGTGCATTACAATGG+TGG | 0.616545 | 6.4:-59236534 | None:intergenic |
| GGTACGCGCTGCTGCCCCTG+AGG | 0.619533 | 6.4:+59236810 | MS.gene49933:CDS |
| CGAAATGGATATCCCTCATG+AGG | 0.633330 | 6.4:-59236604 | None:intergenic |
| TCAGGTTGCTGGTAAAGAGA+GGG | 0.634218 | 6.4:+59236478 | MS.gene49933:CDS |
| ACGGATTCAGAAGTTCTTTG+GGG | 0.636915 | 6.4:-59238204 | None:intergenic |
| TGACAATCCTTATACAGACC+AGG | 0.646899 | 6.4:-59238066 | None:intergenic |
| GGGAACACCACAAGAGTGAG+TGG | 0.646994 | 6.4:+59238355 | MS.gene49933:CDS |
| ACAATATGAAGCGTAAAACA+AGG | 0.648014 | 6.4:+59238385 | MS.gene49933:CDS |
| TGTGGATGGGGATACTCATG+TGG | 0.649096 | 6.4:+59238146 | MS.gene49933:CDS |
| ACTCTTCTTCAGATAGTGGA+GGG | 0.651530 | 6.4:-59238413 | None:intergenic |
| CATGATTGAACGCCTCATGA+GGG | 0.655277 | 6.4:+59236592 | MS.gene49933:CDS |
| GTCTGGACCTAAGCCTACTG+AGG | 0.658281 | 6.4:+59238266 | MS.gene49933:CDS |
| TCTGGACCTAAGCCTACTGA+GGG | 0.681737 | 6.4:+59238267 | MS.gene49933:CDS |
| TAAGTCTAAGGATTTGAATG+CGG | 0.687944 | 6.4:+59234130 | MS.gene49933:CDS |
| GTTGTTCGTCTCAAGAAACA+CGG | 0.697669 | 6.4:+59233898 | MS.gene49933:CDS |
| GATAGGTACTTCCTCCTCAG+GGG | 0.704780 | 6.4:-59236824 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAATTATAATTAATAAC+AGG | - | chr6.4:59237924-59237943 | None:intergenic | 10.0% |
| !! | AAGAATTATAATTAATAACA+GGG | - | chr6.4:59237923-59237942 | None:intergenic | 10.0% |
| !! | AAAAAAAAGAAAAAAGCTTA+TGG | - | chr6.4:59235891-59235910 | None:intergenic | 15.0% |
| !! | AAAATAAAACTAGAAATACA+AGG | + | chr6.4:59237330-59237349 | MS.gene49933:intron | 15.0% |
| !! | AAATAATGTTTATTCAAAGT+TGG | + | chr6.4:59235722-59235741 | MS.gene49933:intron | 15.0% |
| !! | AGAATATTTACAACTTATTT+GGG | + | chr6.4:59236099-59236118 | MS.gene49933:intron | 15.0% |
| !! | AGAATTATAATTAATAACAG+GGG | - | chr6.4:59237922-59237941 | None:intergenic | 15.0% |
| !! | ATGATAATCACAAAAAATTA+GGG | - | chr6.4:59233997-59234016 | None:intergenic | 15.0% |
| !! | ATTTCAAATATTATTACTGT+TGG | + | chr6.4:59237896-59237915 | MS.gene49933:intron | 15.0% |
| !!! | AAGATATAAGTTGATTATAA+GGG | - | chr6.4:59236277-59236296 | None:intergenic | 15.0% |
| !!! | ATAAGCTTTTTTCTTTTTTT+TGG | + | chr6.4:59235890-59235909 | MS.gene49933:intron | 15.0% |
| !!! | TTCTTTTTTGATGAATAAAA+GGG | - | chr6.4:59235663-59235682 | None:intergenic | 15.0% |
| !!! | TTTCTTTTTTGATGAATAAA+AGG | - | chr6.4:59235664-59235683 | None:intergenic | 15.0% |
| !!! | TTTTTTGGAATAAGTTATTT+AGG | + | chr6.4:59235905-59235924 | MS.gene49933:intron | 15.0% |
| !! | AATTGATCTGATTTCTAATT+GGG | + | chr6.4:59238022-59238041 | MS.gene49933:intron | 20.0% |
| !! | ACTAATTATTATGCATAAAC+TGG | - | chr6.4:59236379-59236398 | None:intergenic | 20.0% |
| !! | AGAATTAATTTATAACCACT+TGG | - | chr6.4:59237675-59237694 | None:intergenic | 20.0% |
| !! | CATGATAATCACAAAAAATT+AGG | - | chr6.4:59233998-59234017 | None:intergenic | 20.0% |
| !! | CTAATTATTATGCATAAACT+GGG | - | chr6.4:59236378-59236397 | None:intergenic | 20.0% |
| !! | GAGAATATTTACAACTTATT+TGG | + | chr6.4:59236098-59236117 | MS.gene49933:intron | 20.0% |
| !! | TAATTGATCTGATTTCTAAT+TGG | + | chr6.4:59238021-59238040 | MS.gene49933:intron | 20.0% |
| !! | TATATGAGACAATCATTATA+TGG | - | chr6.4:59236690-59236709 | None:intergenic | 20.0% |
| !! | TGATTAATTGAGTTAATTGA+TGG | + | chr6.4:59234018-59234037 | MS.gene49933:intron | 20.0% |
| !! | TTTACATAATTTATGCTTAG+AGG | + | chr6.4:59234785-59234804 | MS.gene49933:intron | 20.0% |
| !!! | AGGTTTTTAGTTTCTATTTT+GGG | + | chr6.4:59235629-59235648 | MS.gene49933:intron | 20.0% |
| !!! | ATTGACTTTTTAATAAGCTT+TGG | + | chr6.4:59234564-59234583 | MS.gene49933:intron | 20.0% |
| !!! | CAAGATATAAGTTGATTATA+AGG | - | chr6.4:59236278-59236297 | None:intergenic | 20.0% |
| !!! | TATTTGAAATGAAAGAATCA+TGG | - | chr6.4:59237886-59237905 | None:intergenic | 20.0% |
| !!! | TCTTTTTTGATGAATAAAAG+GGG | - | chr6.4:59235662-59235681 | None:intergenic | 20.0% |
| ! | ACCAGATAAAATGTGATAAA+AGG | - | chr6.4:59237275-59237294 | None:intergenic | 25.0% |
| ! | ACTATCACAATAAACTAGAA+AGG | - | chr6.4:59235595-59235614 | None:intergenic | 25.0% |
| ! | ATAATCAACTTATATCTTGC+AGG | + | chr6.4:59236279-59236298 | MS.gene49933:intron | 25.0% |
| ! | CATAATTTATGCTTAGAGTT+TGG | + | chr6.4:59234789-59234808 | MS.gene49933:intron | 25.0% |
| ! | CTTTGATTCTGCTAAAATTT+CGG | + | chr6.4:59237995-59238014 | MS.gene49933:intron | 25.0% |
| ! | GTATTTGTATTTATCTGCTA+AGG | + | chr6.4:59235169-59235188 | MS.gene49933:intron | 25.0% |
| ! | TACAGAAATCATACCAAAAA+TGG | + | chr6.4:59235278-59235297 | MS.gene49933:intron | 25.0% |
| ! | TACAGGAATATGTTAATAGT+CGG | + | chr6.4:59237163-59237182 | MS.gene49933:intron | 25.0% |
| ! | TCATAAACCCTCAAATAATA+AGG | - | chr6.4:59235542-59235561 | None:intergenic | 25.0% |
| ! | TGTCATAAATGTTCAAAAGA+TGG | - | chr6.4:59237231-59237250 | None:intergenic | 25.0% |
| ! | TTTATCCAACCCATAAAAAA+GGG | + | chr6.4:59237205-59237224 | MS.gene49933:intron | 25.0% |
| !! | ATTGTTTTCATGTCCTTTTT+AGG | + | chr6.4:59237376-59237395 | MS.gene49933:intron | 25.0% |
| !! | CATTTTATCCAACACAAAAA+CGG | + | chr6.4:59237114-59237133 | MS.gene49933:intron | 25.0% |
| !! | TCCTTTTATCACATTTTATC+TGG | + | chr6.4:59237271-59237290 | MS.gene49933:intron | 25.0% |
| !! | TCTTTTGAACATTTATGACA+AGG | + | chr6.4:59237231-59237250 | MS.gene49933:intron | 25.0% |
| !! | TGAATCAAAATCTGATTTGA+AGG | + | chr6.4:59238458-59238477 | MS.gene49933:CDS | 25.0% |
| !! | TTTGTTATGAATAAGATGCA+TGG | + | chr6.4:59238093-59238112 | MS.gene49933:CDS | 25.0% |
| !! | TTTTATCCAACCCATAAAAA+AGG | + | chr6.4:59237204-59237223 | MS.gene49933:intron | 25.0% |
| !!! | ACTTGTTTGTTTTGAAAACT+CGG | + | chr6.4:59237478-59237497 | MS.gene49933:intron | 25.0% |
| !!! | GAGGTTTTTAGTTTCTATTT+TGG | + | chr6.4:59235628-59235647 | MS.gene49933:intron | 25.0% |
| !!! | GAGTTAATTGATGGATTAAT+TGG | + | chr6.4:59234027-59234046 | MS.gene49933:intron | 25.0% |
| !!! | TGCTTGTTTTTGTTTTTTGT+TGG | + | chr6.4:59237568-59237587 | MS.gene49933:intron | 25.0% |
| !!! | TGTTGCAGATTTTAAAGAAA+GGG | + | chr6.4:59236450-59236469 | MS.gene49933:intron | 25.0% |
| !!! | TTTTAATAAGCTTTGGTGTT+AGG | + | chr6.4:59234571-59234590 | MS.gene49933:intron | 25.0% |
| AATTGTATATGTCTGTGTTG+TGG | + | chr6.4:59234311-59234330 | MS.gene49933:intron | 30.0% | |
| ACAATATGAAGCGTAAAACA+AGG | + | chr6.4:59238385-59238404 | MS.gene49933:CDS | 30.0% | |
| ACTTTCATATAAGTTGTGAG+CGG | - | chr6.4:59235945-59235964 | None:intergenic | 30.0% | |
| AGCTCAACCTTATTATTTGA+GGG | + | chr6.4:59235532-59235551 | MS.gene49933:intron | 30.0% | |
| AGTGATTTAACTGTTAGTTG+AGG | + | chr6.4:59236396-59236415 | MS.gene49933:intron | 30.0% | |
| ATGGAACATTTATAGAGACA+TGG | - | chr6.4:59237867-59237886 | None:intergenic | 30.0% | |
| CATAATTTATGCTTAGAGGT+TGG | + | chr6.4:59234831-59234850 | MS.gene49933:intron | 30.0% | |
| GATTATGAAAGTCGTATTAC+AGG | + | chr6.4:59236729-59236748 | MS.gene49933:intron | 30.0% | |
| GCTTTATCCAATAGTTGAAA+AGG | - | chr6.4:59235360-59235379 | None:intergenic | 30.0% | |
| GTTGGATAAAATGTGGTAAA+AGG | - | chr6.4:59237195-59237214 | None:intergenic | 30.0% | |
| GTTTATACGAATGTTTCGAA+AGG | + | chr6.4:59234098-59234117 | MS.gene49933:CDS | 30.0% | |
| TAAAAACCTCTTAGAAAGAG+AGG | - | chr6.4:59235618-59235637 | None:intergenic | 30.0% | |
| TAACTCATTTCCTAAGCTTA+TGG | - | chr6.4:59235256-59235275 | None:intergenic | 30.0% | |
| TAAGCACTCATGCTTAATTT+GGG | + | chr6.4:59235130-59235149 | MS.gene49933:intron | 30.0% | |
| TAAGTCTAAGGATTTGAATG+CGG | + | chr6.4:59234130-59234149 | MS.gene49933:CDS | 30.0% | |
| TAGCTACAAAACAACTAACA+TGG | - | chr6.4:59234222-59234241 | None:intergenic | 30.0% | |
| TAGCTCAACCTTATTATTTG+AGG | + | chr6.4:59235531-59235550 | MS.gene49933:intron | 30.0% | |
| TATATCTGCATTTGCGTATA+TGG | + | chr6.4:59237961-59237980 | MS.gene49933:intron | 30.0% | |
| TGACATTGAATTGATCAAGT+AGG | - | chr6.4:59234862-59234881 | None:intergenic | 30.0% | |
| TGATATCATAAACCTACCTA+TGG | - | chr6.4:59235445-59235464 | None:intergenic | 30.0% | |
| TTAAGCACTCATGCTTAATT+TGG | + | chr6.4:59235129-59235148 | MS.gene49933:intron | 30.0% | |
| TTTATGCTTAGAGTTTGGTT+AGG | + | chr6.4:59234794-59234813 | MS.gene49933:intron | 30.0% | |
| TTTGATAAGCAGATTGAATG+TGG | - | chr6.4:59237804-59237823 | None:intergenic | 30.0% | |
| ! | AAAAGTCTTGTGCATTACAA+TGG | - | chr6.4:59236540-59236559 | None:intergenic | 30.0% |
| ! | ATAAGCACTGTCATAATGTT+TGG | + | chr6.4:59235834-59235853 | MS.gene49933:intron | 30.0% |
| ! | ATTTTATTCTCTGTAACCCT+GGG | + | chr6.4:59236956-59236975 | MS.gene49933:intron | 30.0% |
| ! | TAAGCACTGTCATAATGTTT+GGG | + | chr6.4:59235835-59235854 | MS.gene49933:intron | 30.0% |
| ! | TGTCCCTTCTTTAGAAATAA+CGG | - | chr6.4:59236881-59236900 | None:intergenic | 30.0% |
| ! | TTGATTATAAGGGTATGCTT+GGG | - | chr6.4:59236267-59236286 | None:intergenic | 30.0% |
| !! | ATGGAATTCTTTAGAATGAC+AGG | - | chr6.4:59236671-59236690 | None:intergenic | 30.0% |
| !! | CAACCGTTATTTCTAAAGAA+GGG | + | chr6.4:59236875-59236894 | MS.gene49933:CDS | 30.0% |
| !! | CTGTTGCAGATTTTAAAGAA+AGG | + | chr6.4:59236449-59236468 | MS.gene49933:intron | 30.0% |
| !! | GTTGCAGATTTTAAAGAAAG+GGG | + | chr6.4:59236451-59236470 | MS.gene49933:intron | 30.0% |
| !! | TATCTACAGTTGTTTTCAGT+AGG | + | chr6.4:59236124-59236143 | MS.gene49933:intron | 30.0% |
| !! | TTGGTGTTTTTGTAGTGAAA+AGG | + | chr6.4:59234046-59234065 | MS.gene49933:intron | 30.0% |
| !! | TTTATGGGTTGGATAAAATG+TGG | - | chr6.4:59237202-59237221 | None:intergenic | 30.0% |
| !!! | AAAAGATGGCCCTTTTTTAT+GGG | - | chr6.4:59237217-59237236 | None:intergenic | 30.0% |
| !!! | GTTTTTGTTTTTTGTTGGCA+TGG | + | chr6.4:59237573-59237592 | MS.gene49933:intron | 30.0% |
| !!! | TGTTTTGAAAACTCGGTATT+CGG | + | chr6.4:59237485-59237504 | MS.gene49933:intron | 30.0% |
| !!! | TTTTGATAAGCTTTGGTGTT+CGG | + | chr6.4:59234989-59235008 | MS.gene49933:intron | 30.0% |
| AAGTTTGAGAAGTTGTTCGT+TGG | + | chr6.4:59237305-59237324 | MS.gene49933:intron | 35.0% | |
| AATAACCAACTTCTGATCGA+AGG | - | chr6.4:59234767-59234786 | None:intergenic | 35.0% | |
| AATGGCTGAGTTATCAGTTA+TGG | + | chr6.4:59235296-59235315 | MS.gene49933:intron | 35.0% | |
| AATTGTAAAGTTCTCCCATG+CGG | + | chr6.4:59235487-59235506 | MS.gene49933:intron | 35.0% | |
| ACAAACCTCTAAGCAAATAC+TGG | - | chr6.4:59234177-59234196 | None:intergenic | 35.0% | |
| ATAAACTAGAAAGGCTAGGT+AGG | - | chr6.4:59235586-59235605 | None:intergenic | 35.0% | |
| ATGGCTGAGTTATCAGTTAT+GGG | + | chr6.4:59235297-59235316 | MS.gene49933:intron | 35.0% | |
| ATTCAGTTAGCAATATCACG+TGG | + | chr6.4:59235334-59235353 | MS.gene49933:intron | 35.0% | |
| CAAAAGCAAACAATTTCGTC+TGG | + | chr6.4:59238249-59238268 | MS.gene49933:CDS | 35.0% | |
| CACAATAAACTAGAAAGGCT+AGG | - | chr6.4:59235590-59235609 | None:intergenic | 35.0% | |
| CAGGGTTACAGAGAATAAAA+TGG | - | chr6.4:59236957-59236976 | None:intergenic | 35.0% | |
| CATGGGAGAACTTTACAATT+GGG | - | chr6.4:59235487-59235506 | None:intergenic | 35.0% | |
| CTTCTATAATCAAGACAACG+TGG | - | chr6.4:59236203-59236222 | None:intergenic | 35.0% | |
| GAACACCAAAGCTTATCAAA+AGG | - | chr6.4:59234990-59235009 | None:intergenic | 35.0% | |
| GATATACCAGACACAACTTA+TGG | - | chr6.4:59237947-59237966 | None:intergenic | 35.0% | |
| GCTAAGGTATGCATTTATCA+AGG | + | chr6.4:59235185-59235204 | MS.gene49933:intron | 35.0% | |
| TAAACTAGAAAGGCTAGGTA+GGG | - | chr6.4:59235585-59235604 | None:intergenic | 35.0% | |
| TATAAAACGGTGTCCATTGA+GGG | + | chr6.4:59236789-59236808 | MS.gene49933:CDS | 35.0% | |
| TATCACATGTCCATAAGCTT+AGG | + | chr6.4:59235243-59235262 | MS.gene49933:intron | 35.0% | |
| TCATTCCAGTATTTGCTTAG+AGG | + | chr6.4:59234169-59234188 | MS.gene49933:CDS | 35.0% | |
| TCTTGTTCACTCTCTTTATG+TGG | + | chr6.4:59238128-59238147 | MS.gene49933:CDS | 35.0% | |
| TGAACATCTGTGATAGTTAC+AGG | + | chr6.4:59237146-59237165 | MS.gene49933:intron | 35.0% | |
| TGAAGATGCTAAGTTGTACA+GGG | + | chr6.4:59238335-59238354 | MS.gene49933:CDS | 35.0% | |
| TTCACTCTCTTTATGTGGAT+GGG | + | chr6.4:59238133-59238152 | MS.gene49933:CDS | 35.0% | |
| TTCTTTCCATAAGTTGTGTC+TGG | + | chr6.4:59237938-59237957 | MS.gene49933:intron | 35.0% | |
| TTGAAGATGCTAAGTTGTAC+AGG | + | chr6.4:59238334-59238353 | MS.gene49933:CDS | 35.0% | |
| TTTAAAGAAAGGGGAACTTC+AGG | + | chr6.4:59236460-59236479 | MS.gene49933:CDS | 35.0% | |
| TTTATCATTCAGCTCAAGCA+CGG | - | chr6.4:59238226-59238245 | None:intergenic | 35.0% | |
| TTTGGGTAGAATTTGGTCAT+GGG | + | chr6.4:59237405-59237424 | MS.gene49933:intron | 35.0% | |
| ! | AATACAAGGCGCATTTTATC+TGG | + | chr6.4:59237344-59237363 | MS.gene49933:intron | 35.0% |
| ! | ACAGACCTTTTGATAAGCTT+TGG | + | chr6.4:59234982-59235001 | MS.gene49933:intron | 35.0% |
| ! | CAATCATGCTGATAGTGTAA+GGG | - | chr6.4:59236580-59236599 | None:intergenic | 35.0% |
| ! | CATGCATTTTCTGTAAGTTG+TGG | + | chr6.4:59237778-59237797 | MS.gene49933:intron | 35.0% |
| ! | CATTTTATTCTCTGTAACCC+TGG | + | chr6.4:59236955-59236974 | MS.gene49933:intron | 35.0% |
| ! | GCATTAAGAGTTCTGATTGA+AGG | - | chr6.4:59234952-59234971 | None:intergenic | 35.0% |
| ! | GTTGATTATAAGGGTATGCT+TGG | - | chr6.4:59236268-59236287 | None:intergenic | 35.0% |
| ! | TCAATCATGCTGATAGTGTA+AGG | - | chr6.4:59236581-59236600 | None:intergenic | 35.0% |
| ! | TCAATGGACACCGTTTTATA+GGG | - | chr6.4:59236789-59236808 | None:intergenic | 35.0% |
| ! | TGGGTTGCAGATTTTTGAAT+TGG | + | chr6.4:59238041-59238060 | MS.gene49933:intron | 35.0% |
| ! | TGTGTTGCTCAGTTATTTCA+TGG | + | chr6.4:59236929-59236948 | MS.gene49933:intron | 35.0% |
| !! | AACATGATCCGTTTTTGTGT+TGG | - | chr6.4:59237125-59237144 | None:intergenic | 35.0% |
| !! | ACTGATAACTCAGCCATTTT+TGG | - | chr6.4:59235294-59235313 | None:intergenic | 35.0% |
| !! | AGAAGCACTACCCTATAAAA+CGG | + | chr6.4:59236776-59236795 | MS.gene49933:CDS | 35.0% |
| !! | GCAACCGTTATTTCTAAAGA+AGG | + | chr6.4:59236874-59236893 | MS.gene49933:CDS | 35.0% |
| !! | TCCTTTTTAGGCAAGCTTTT+GGG | + | chr6.4:59237388-59237407 | MS.gene49933:intron | 35.0% |
| !! | TTTTGGGTAGAATTTGGTCA+TGG | + | chr6.4:59237404-59237423 | MS.gene49933:intron | 35.0% |
| !!! | CAAAAGATGGCCCTTTTTTA+TGG | - | chr6.4:59237218-59237237 | None:intergenic | 35.0% |
| !!! | CTGGTTTGCTTGTTTTAGTT+GGG | + | chr6.4:59237621-59237640 | MS.gene49933:intron | 35.0% |
| !!! | TCTGGTTTGCTTGTTTTAGT+TGG | + | chr6.4:59237620-59237639 | MS.gene49933:intron | 35.0% |
| !!! | TTGTTTTTTGTTGGCATGGT+TGG | + | chr6.4:59237577-59237596 | MS.gene49933:intron | 35.0% |
| AACATATCAATGCCCCGTTT+AGG | - | chr6.4:59234454-59234473 | None:intergenic | 40.0% | |
| AATGCTGTCTAGTCAGTTCA+GGG | + | chr6.4:59236505-59236524 | MS.gene49933:CDS | 40.0% | |
| ACACTCACTTAGGGTACATA+TGG | - | chr6.4:59236070-59236089 | None:intergenic | 40.0% | |
| ACCACTTGGTTCCAAATACA+AGG | - | chr6.4:59237661-59237680 | None:intergenic | 40.0% | |
| ACCCAAAAGCTTGCCTAAAA+AGG | - | chr6.4:59237392-59237411 | None:intergenic | 40.0% | |
| ACGGATTCAGAAGTTCTTTG+GGG | - | chr6.4:59238207-59238226 | None:intergenic | 40.0% | |
| AGGTGTTCTTGCTAAGTCTA+AGG | + | chr6.4:59234118-59234137 | MS.gene49933:CDS | 40.0% | |
| ATAGCTATGAAACACTGTCG+TGG | + | chr6.4:59234897-59234916 | MS.gene49933:intron | 40.0% | |
| ATTTGCAGCTTGAGTGCTTA+AGG | - | chr6.4:59235788-59235807 | None:intergenic | 40.0% | |
| CACGGATTCAGAAGTTCTTT+GGG | - | chr6.4:59238208-59238227 | None:intergenic | 40.0% | |
| CTATAAAACGGTGTCCATTG+AGG | + | chr6.4:59236788-59236807 | MS.gene49933:CDS | 40.0% | |
| CTTCCAAACACACTCACTTA+GGG | - | chr6.4:59236079-59236098 | None:intergenic | 40.0% | |
| GATAGTCCTCTCTTTCTAAG+AGG | + | chr6.4:59235609-59235628 | MS.gene49933:intron | 40.0% | |
| GCATGGGAGAACTTTACAAT+TGG | - | chr6.4:59235488-59235507 | None:intergenic | 40.0% | |
| GCTAGGTTACACCTTGTATT+TGG | + | chr6.4:59237647-59237666 | MS.gene49933:intron | 40.0% | |
| GTAGCTATGACACACTGATA+TGG | + | chr6.4:59234235-59234254 | MS.gene49933:intron | 40.0% | |
| GTTCACTCTCTTTATGTGGA+TGG | + | chr6.4:59238132-59238151 | MS.gene49933:CDS | 40.0% | |
| GTTGTTCGTCTCAAGAAACA+CGG | + | chr6.4:59233898-59233917 | MS.gene49933:CDS | 40.0% | |
| TAAGCACTCAAGCTGCAAAT+GGG | + | chr6.4:59235788-59235807 | MS.gene49933:intron | 40.0% | |
| TACAATTGGGACTTAAGTCG+CGG | - | chr6.4:59235474-59235493 | None:intergenic | 40.0% | |
| TACACATCAGTTCCATAGGT+AGG | + | chr6.4:59235430-59235449 | MS.gene49933:intron | 40.0% | |
| TATGGAACTGATGTGTAGCA+GGG | - | chr6.4:59235427-59235446 | None:intergenic | 40.0% | |
| TCACTCTCTTTATGTGGATG+GGG | + | chr6.4:59238134-59238153 | MS.gene49933:CDS | 40.0% | |
| TCTTCCAAACACACTCACTT+AGG | - | chr6.4:59236080-59236099 | None:intergenic | 40.0% | |
| TGACAATCCTTATACAGACC+AGG | - | chr6.4:59238069-59238088 | None:intergenic | 40.0% | |
| TGTTTGGATCAACAGCGAAA+TGG | - | chr6.4:59236622-59236641 | None:intergenic | 40.0% | |
| TTAAGCACTCAAGCTGCAAA+TGG | + | chr6.4:59235787-59235806 | MS.gene49933:intron | 40.0% | |
| TTGTTAGCTGGAAAACACTC+TGG | + | chr6.4:59237602-59237621 | MS.gene49933:intron | 40.0% | |
| TTTCGAAATTACGTACACGC+CGG | - | chr6.4:59233974-59233993 | None:intergenic | 40.0% | |
| ! | ACCTTGTATTTGGAACCAAG+TGG | + | chr6.4:59237657-59237676 | MS.gene49933:intron | 40.0% |
| ! | AGTCTTGTGCATTACAATGG+TGG | - | chr6.4:59236537-59236556 | None:intergenic | 40.0% |
| ! | CACTCATGCTTAATTTGGGT+TGG | + | chr6.4:59235134-59235153 | MS.gene49933:intron | 40.0% |
| ! | CAGATTTTTGAATTGGAGCC+TGG | + | chr6.4:59238048-59238067 | MS.gene49933:intron | 40.0% |
| ! | CAGGGGTTAATCTTTTGTTC+GGG | + | chr6.4:59237428-59237447 | MS.gene49933:intron | 40.0% |
| ! | CAGTGTCCTAAAAGTGTAGT+TGG | - | chr6.4:59234923-59234942 | None:intergenic | 40.0% |
| ! | CAGTTATGGGCTATACATCA+AGG | + | chr6.4:59235310-59235329 | MS.gene49933:intron | 40.0% |
| ! | CTCAATGGACACCGTTTTAT+AGG | - | chr6.4:59236790-59236809 | None:intergenic | 40.0% |
| ! | CTCAGCTTTTCCAAAAGGAT+AGG | - | chr6.4:59236844-59236863 | None:intergenic | 40.0% |
| ! | GCAGGGGTTAATCTTTTGTT+CGG | + | chr6.4:59237427-59237446 | MS.gene49933:intron | 40.0% |
| !! | ACTCTTCTTCAGATAGTGGA+GGG | - | chr6.4:59238416-59238435 | None:intergenic | 40.0% |
| !! | AGAGTGTTTTCCAGCTAACA+AGG | - | chr6.4:59237603-59237622 | None:intergenic | 40.0% |
| !! | CGCATTTTATCTGGTTTCTC+AGG | + | chr6.4:59237353-59237372 | MS.gene49933:intron | 40.0% |
| !! | CTTCTAGAACAGAAAACCCA+GGG | - | chr6.4:59236975-59236994 | None:intergenic | 40.0% |
| !! | GCAAGCTTTTGGGTAGAATT+TGG | + | chr6.4:59237398-59237417 | MS.gene49933:intron | 40.0% |
| !! | GGGCATTGATATGTTGATAC+TGG | + | chr6.4:59234459-59234478 | MS.gene49933:intron | 40.0% |
| !! | GTCCTTTTTAGGCAAGCTTT+TGG | + | chr6.4:59237387-59237406 | MS.gene49933:intron | 40.0% |
| !! | GTTAATCGCTTTTGACCTAC+TGG | - | chr6.4:59233868-59233887 | None:intergenic | 40.0% |
| !! | TAGGTAGGGTAATGGAATCA+GGG | - | chr6.4:59235571-59235590 | None:intergenic | 40.0% |
| !! | TGAAGTGTTGCAGTCACATA+CGG | + | chr6.4:59234076-59234095 | MS.gene49933:CDS | 40.0% |
| !!! | CAACTACACTTTTAGGACAC+TGG | + | chr6.4:59234921-59234940 | MS.gene49933:intron | 40.0% |
| !!! | GTGTTGCACTTGTTTTGCTT+TGG | - | chr6.4:59238300-59238319 | None:intergenic | 40.0% |
| !!! | TTGTTTTAGTTGGGTCTGCT+AGG | + | chr6.4:59237630-59237649 | MS.gene49933:intron | 40.0% |
| AAAACTCGGTATTCGGTCCA+AGG | + | chr6.4:59237492-59237511 | MS.gene49933:intron | 45.0% | |
| AAGGATTTGAATGCGGCGTT+TGG | + | chr6.4:59234137-59234156 | MS.gene49933:CDS | 45.0% | |
| ACAAGATACCTGCTTCTTGG+AGG | - | chr6.4:59236648-59236667 | None:intergenic | 45.0% | |
| ACACACCTTCGATCAGAAGT+TGG | + | chr6.4:59234759-59234778 | MS.gene49933:intron | 45.0% | |
| ACAGACACGGAAACCTAAAC+GGG | + | chr6.4:59234438-59234457 | MS.gene49933:intron | 45.0% | |
| ACAGCGCGCAAATGAGTATT+TGG | - | chr6.4:59237734-59237753 | None:intergenic | 45.0% | |
| ACCCTAACACCGTTCTTTCA+TGG | + | chr6.4:59233944-59233963 | MS.gene49933:CDS | 45.0% | |
| AGAAAGGCTAGGTAGGGTAA+TGG | - | chr6.4:59235579-59235598 | None:intergenic | 45.0% | |
| AGGACAAGATACCTGCTTCT+TGG | - | chr6.4:59236651-59236670 | None:intergenic | 45.0% | |
| ATGCCTTCAATCAGACGAGT+CGG | + | chr6.4:59234514-59234533 | MS.gene49933:intron | 45.0% | |
| ATTGGAGCCTGGTCTGTATA+AGG | + | chr6.4:59238059-59238078 | MS.gene49933:CDS | 45.0% | |
| CAATGCTGTCTAGTCAGTTC+AGG | + | chr6.4:59236504-59236523 | MS.gene49933:CDS | 45.0% | |
| CACAGACACGGAAACCTAAA+CGG | + | chr6.4:59234437-59234456 | MS.gene49933:intron | 45.0% | |
| CATGATTGAACGCCTCATGA+GGG | + | chr6.4:59236592-59236611 | MS.gene49933:CDS | 45.0% | |
| CGAAATGGATATCCCTCATG+AGG | - | chr6.4:59236607-59236626 | None:intergenic | 45.0% | |
| CTATGGAACTGATGTGTAGC+AGG | - | chr6.4:59235428-59235447 | None:intergenic | 45.0% | |
| CTGCTACACATCAGTTCCAT+AGG | + | chr6.4:59235426-59235445 | MS.gene49933:intron | 45.0% | |
| GAAAGTCGTATTACAGGCTC+TGG | + | chr6.4:59236735-59236754 | MS.gene49933:intron | 45.0% | |
| GCACGGATTCAGAAGTTCTT+TGG | - | chr6.4:59238209-59238228 | None:intergenic | 45.0% | |
| GCGATCAACCTTATCCAACA+AGG | + | chr6.4:59235398-59235417 | MS.gene49933:intron | 45.0% | |
| GTACCCTAAGTGAGTGTGTT+TGG | + | chr6.4:59236073-59236092 | MS.gene49933:intron | 45.0% | |
| GTAGAATTTGGTCATGGGCA+GGG | + | chr6.4:59237410-59237429 | MS.gene49933:intron | 45.0% | |
| GTGCACTCTTCTTCAGATAG+TGG | - | chr6.4:59238420-59238439 | None:intergenic | 45.0% | |
| TAGAATTTGGTCATGGGCAG+GGG | + | chr6.4:59237411-59237430 | MS.gene49933:intron | 45.0% | |
| TATGTTGGACACTGACGTGT+AGG | + | chr6.4:59234729-59234748 | MS.gene49933:intron | 45.0% | |
| TGTCAGTGTCGTGTCTATGT+TGG | + | chr6.4:59234714-59234733 | MS.gene49933:intron | 45.0% | |
| TGTCGCACACTAACATGTGT+AGG | + | chr6.4:59234482-59234501 | MS.gene49933:intron | 45.0% | |
| TTTGGTTGTTGTCCCTCAGT+AGG | - | chr6.4:59238282-59238301 | None:intergenic | 45.0% | |
| ! | AAGCCTTATGCCACTAAGTG+GGG | + | chr6.4:59237031-59237050 | MS.gene49933:intron | 45.0% |
| ! | ACGCTTTCGATCAGAAGTGT+CGG | + | chr6.4:59234361-59234380 | MS.gene49933:intron | 45.0% |
| ! | ACTCGCTCAGCTTTTCCAAA+AGG | - | chr6.4:59236849-59236868 | None:intergenic | 45.0% |
| ! | AGAAGAGTGCACAGCAGATA+TGG | + | chr6.4:59238428-59238447 | MS.gene49933:CDS | 45.0% |
| ! | ATAAGGGTATGCTTGGGACA+TGG | - | chr6.4:59236261-59236280 | None:intergenic | 45.0% |
| ! | CAAGCCTTATGCCACTAAGT+GGG | + | chr6.4:59237030-59237049 | MS.gene49933:intron | 45.0% |
| ! | CACGTGGCCTTTTCAACTAT+TGG | + | chr6.4:59235350-59235369 | MS.gene49933:intron | 45.0% |
| ! | CACTCTTCTTCAGATAGTGG+AGG | - | chr6.4:59238417-59238436 | None:intergenic | 45.0% |
| ! | CGGGTGCAGTAGTTTTTCTT+AGG | + | chr6.4:59237447-59237466 | MS.gene49933:intron | 45.0% |
| ! | GCCATGAAAGAACGGTGTTA+GGG | - | chr6.4:59233948-59233967 | None:intergenic | 45.0% |
| ! | TAAGGGTATGCTTGGGACAT+GGG | - | chr6.4:59236260-59236279 | None:intergenic | 45.0% |
| ! | TCAGGTTGCTGGTAAAGAGA+GGG | + | chr6.4:59236478-59236497 | MS.gene49933:CDS | 45.0% |
| ! | TCGTGGCCAACTACACTTTT+AGG | + | chr6.4:59234914-59234933 | MS.gene49933:intron | 45.0% |
| ! | TGTTGGATAAGGTTGATCGC+AGG | - | chr6.4:59235398-59235417 | None:intergenic | 45.0% |
| !! | AGGTAGGGTAATGGAATCAG+GGG | - | chr6.4:59235570-59235589 | None:intergenic | 45.0% |
| !! | ATGAAGCACTGACACAGACA+CGG | + | chr6.4:59234425-59234444 | MS.gene49933:intron | 45.0% |
| !! | ATTGGACCCCTTGGATTAGT+CGG | - | chr6.4:59237519-59237538 | None:intergenic | 45.0% |
| !! | CGTTCATTGGTTCAACCAGT+AGG | + | chr6.4:59233850-59233869 | MS.gene49933:CDS | 45.0% |
| !! | CTAGGTAGGGTAATGGAATC+AGG | - | chr6.4:59235572-59235591 | None:intergenic | 45.0% |
| !! | GCTTCTAGAACAGAAAACCC+AGG | - | chr6.4:59236976-59236995 | None:intergenic | 45.0% |
| !! | TCAGAAGTTCTTTGGGGCAA+TGG | - | chr6.4:59238201-59238220 | None:intergenic | 45.0% |
| !! | TTCAGGTTGCTGGTAAAGAG+AGG | + | chr6.4:59236477-59236496 | MS.gene49933:CDS | 45.0% |
| !! | TTTTGGAAAAGCTGAGCGAG+TGG | + | chr6.4:59236848-59236867 | MS.gene49933:CDS | 45.0% |
| !!! | GATGGCCCTTTTTTATGGGT+TGG | - | chr6.4:59237213-59237232 | None:intergenic | 45.0% |
| !!! | GGAGGAAGTACCTATCCTTT+TGG | + | chr6.4:59236831-59236850 | MS.gene49933:CDS | 45.0% |
| AAACAGCACCTCCAAGAAGC+AGG | + | chr6.4:59236637-59236656 | MS.gene49933:CDS | 50.0% | |
| AAGTGGGGTTGCCACTAAGT+GGG | + | chr6.4:59237046-59237065 | MS.gene49933:intron | 50.0% | |
| ACCGTTCTTTCATGGCGTTC+CGG | + | chr6.4:59233952-59233971 | MS.gene49933:CDS | 50.0% | |
| AGGATAGGTACTTCCTCCTC+AGG | - | chr6.4:59236829-59236848 | None:intergenic | 50.0% | |
| ATGTAGCCAACCCCACTTAG+TGG | - | chr6.4:59237060-59237079 | None:intergenic | 50.0% | |
| CAACCCCACTTAGTGGCATA+AGG | - | chr6.4:59237037-59237056 | None:intergenic | 50.0% | |
| CAAGGACCGACTAATCCAAG+GGG | + | chr6.4:59237510-59237529 | MS.gene49933:intron | 50.0% | |
| CACTCAAGCTGCAAATGGGT+TGG | + | chr6.4:59235792-59235811 | MS.gene49933:intron | 50.0% | |
| CAGACACGGAAACCTAAACG+GGG | + | chr6.4:59234439-59234458 | MS.gene49933:intron | 50.0% | |
| CCAAGGACCGACTAATCCAA+GGG | + | chr6.4:59237509-59237528 | MS.gene49933:intron | 50.0% | |
| CCACTTAGTGGCATAAGGCT+TGG | - | chr6.4:59237032-59237051 | None:intergenic | 50.0% | |
| CGCCATGAAAGAACGGTGTT+AGG | - | chr6.4:59233949-59233968 | None:intergenic | 50.0% | |
| GACACTTCTGATCGAAAGCG+TGG | - | chr6.4:59234362-59234381 | None:intergenic | 50.0% | |
| GATAGGTACTTCCTCCTCAG+GGG | - | chr6.4:59236827-59236846 | None:intergenic | 50.0% | |
| GCATGATTGAACGCCTCATG+AGG | + | chr6.4:59236591-59236610 | MS.gene49933:CDS | 50.0% | |
| GGATAGGTACTTCCTCCTCA+GGG | - | chr6.4:59236828-59236847 | None:intergenic | 50.0% | |
| GGTAGAATTTGGTCATGGGC+AGG | + | chr6.4:59237409-59237428 | MS.gene49933:intron | 50.0% | |
| TAAGTGGGGTTGCCACTAAG+TGG | + | chr6.4:59237045-59237064 | MS.gene49933:intron | 50.0% | |
| TCCAAGGACCGACTAATCCA+AGG | + | chr6.4:59237508-59237527 | MS.gene49933:intron | 50.0% | |
| TCGCAGGCAGCTAATGAACT+AGG | - | chr6.4:59235382-59235401 | None:intergenic | 50.0% | |
| TCTGGACCTAAGCCTACTGA+GGG | + | chr6.4:59238267-59238286 | MS.gene49933:CDS | 50.0% | |
| TGTGGATGGGGATACTCATG+TGG | + | chr6.4:59238146-59238165 | MS.gene49933:CDS | 50.0% | |
| TGTTGTCCCTCAGTAGGCTT+AGG | - | chr6.4:59238276-59238295 | None:intergenic | 50.0% | |
| TTAGTGGCAACCCCACTTAG+TGG | - | chr6.4:59237044-59237063 | None:intergenic | 50.0% | |
| ! | CAGGGCATCCTTGTTGGATA+AGG | - | chr6.4:59235409-59235428 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATGCCACTAAG+TGG | + | chr6.4:59237029-59237048 | MS.gene49933:intron | 50.0% |
| ! | CGTCTGATTGAAGGCATGTC+TGG | - | chr6.4:59234511-59234530 | None:intergenic | 50.0% |
| ! | CTTCTGATCGAAGGTGTGTC+CGG | - | chr6.4:59234758-59234777 | None:intergenic | 50.0% |
| ! | TTCTGATCGAAAGCGTGGTC+AGG | - | chr6.4:59234357-59234376 | None:intergenic | 50.0% |
| !! | AAAGGGGAACTTCAGGTTGC+TGG | + | chr6.4:59236467-59236486 | MS.gene49933:CDS | 50.0% |
| !! | ACAGGCTCTGGAGTTGATTC+AGG | + | chr6.4:59236747-59236766 | MS.gene49933:intron | 50.0% |
| !! | AGTGTAAGGGCGCTTAGTCT+CGG | - | chr6.4:59236567-59236586 | None:intergenic | 50.0% |
| !! | TGCTTCTTGGAGGTGCTGTT+TGG | - | chr6.4:59236638-59236657 | None:intergenic | 50.0% |
| AGTGGGGTTGCCACTAAGTG+GGG | + | chr6.4:59237047-59237066 | MS.gene49933:intron | 55.0% | |
| CTTCGCCAATGCATCCGCAT+GGG | - | chr6.4:59235504-59235523 | None:intergenic | 55.0% | |
| GACACTGACGTGTAGGACAC+CGG | + | chr6.4:59234736-59234755 | MS.gene49933:intron | 55.0% | |
| GCCGGAACGCCATGAAAGAA+CGG | - | chr6.4:59233956-59233975 | None:intergenic | 55.0% | |
| GGAAAAGCTGAGCGAGTGGA+AGG | + | chr6.4:59236852-59236871 | MS.gene49933:CDS | 55.0% | |
| GGGAACACCACAAGAGTGAG+TGG | + | chr6.4:59238355-59238374 | MS.gene49933:CDS | 55.0% | |
| GTCTGGACCTAAGCCTACTG+AGG | + | chr6.4:59238266-59238285 | MS.gene49933:CDS | 55.0% | |
| GTTCTCCCATGCGGATGCAT+TGG | + | chr6.4:59235496-59235515 | MS.gene49933:intron | 55.0% | |
| TCTTCGCCAATGCATCCGCA+TGG | - | chr6.4:59235505-59235524 | None:intergenic | 55.0% | |
| ! | GCGGATGCATTGGCGAAGAT+TGG | + | chr6.4:59235506-59235525 | MS.gene49933:intron | 55.0% |
| ! | GCTTGTGCCACTCACTCTTG+TGG | - | chr6.4:59238365-59238384 | None:intergenic | 55.0% |
| ! | GTGTAGCAGGGCATCCTTGT+TGG | - | chr6.4:59235415-59235434 | None:intergenic | 55.0% |
| !! | CCCTTGGATTAGTCGGTCCT+TGG | - | chr6.4:59237512-59237531 | None:intergenic | 55.0% |
| !! | GCACCGACTCGTCTGATTGA+AGG | - | chr6.4:59234520-59234539 | None:intergenic | 55.0% |
| !! | GCATGGTTGGCCTTGTTAGC+TGG | + | chr6.4:59237590-59237609 | MS.gene49933:intron | 55.0% |
| !! | GTGTAAGGGCGCTTAGTCTC+GGG | - | chr6.4:59236566-59236585 | None:intergenic | 55.0% |
| !! | GTTCTTTGGGGCAATGGTGC+AGG | - | chr6.4:59238195-59238214 | None:intergenic | 55.0% |
| !! | TCAGACGAGTCGGTGCTGTA+AGG | + | chr6.4:59234524-59234543 | MS.gene49933:intron | 55.0% |
| AATCCCACCACCCACATGCG+GGG | + | chr6.4:59237536-59237555 | MS.gene49933:intron | 60.0% | |
| CAATCCCACCACCCACATGC+GGG | + | chr6.4:59237535-59237554 | MS.gene49933:intron | 60.0% | |
| CCAATCCCACCACCCACATG+CGG | + | chr6.4:59237534-59237553 | MS.gene49933:intron | 60.0% | |
| GGGTTGCCACTAAGTGGGGT+TGG | + | chr6.4:59237051-59237070 | MS.gene49933:intron | 60.0% | |
| ATCCCACCACCCACATGCGG+GGG | + | chr6.4:59237537-59237556 | MS.gene49933:intron | 65.0% | |
| GCAGCAGCGCGTACCCTCAA+TGG | - | chr6.4:59236805-59236824 | None:intergenic | 65.0% | |
| !! | CCGCATGTGGGTGGTGGGAT+TGG | - | chr6.4:59237537-59237556 | None:intergenic | 65.0% |
| !! | GGTGGTGGGATTGGACCCCT+TGG | - | chr6.4:59237528-59237547 | None:intergenic | 65.0% |
| AACCCCCACCCCCCGCATGT+GGG | - | chr6.4:59237549-59237568 | None:intergenic | 70.0% | |
| ACCACCCACATGCGGGGGGT+GGG | + | chr6.4:59237542-59237561 | MS.gene49933:intron | 70.0% | |
| ACCCCCCGCATGTGGGTGGT+GGG | - | chr6.4:59237542-59237561 | None:intergenic | 70.0% | |
| TCCCACCACCCACATGCGGG+GGG | + | chr6.4:59237538-59237557 | MS.gene49933:intron | 70.0% | |
| ACGCGCTGCTGCCCCTGAGG+AGG | + | chr6.4:59236813-59236832 | MS.gene49933:CDS | 75.0% | |
| CAACCCCCACCCCCCGCATG+TGG | - | chr6.4:59237550-59237569 | None:intergenic | 75.0% | |
| CACCACCCACATGCGGGGGG+TGG | + | chr6.4:59237541-59237560 | MS.gene49933:intron | 75.0% | |
| CACCCACATGCGGGGGGTGG+GGG | + | chr6.4:59237544-59237563 | MS.gene49933:intron | 75.0% | |
| CACCCCCCGCATGTGGGTGG+TGG | - | chr6.4:59237543-59237562 | None:intergenic | 75.0% | |
| CCACCCACATGCGGGGGGTG+GGG | + | chr6.4:59237543-59237562 | MS.gene49933:intron | 75.0% | |
| GGTACGCGCTGCTGCCCCTG+AGG | + | chr6.4:59236810-59236829 | MS.gene49933:CDS | 75.0% | |
| ! | CCCCACCCCCCGCATGTGGG+TGG | - | chr6.4:59237546-59237565 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 59233844 | 59238494 | 59233844 | ID=MS.gene49933 |
| chr6.4 | mRNA | 59233844 | 59238494 | 59233844 | ID=MS.gene49933.t1;Parent=MS.gene49933 |
| chr6.4 | exon | 59233844 | 59233977 | 59233844 | ID=MS.gene49933.t1.exon1;Parent=MS.gene49933.t1 |
| chr6.4 | CDS | 59233844 | 59233977 | 59233844 | ID=cds.MS.gene49933.t1;Parent=MS.gene49933.t1 |
| chr6.4 | exon | 59234061 | 59234190 | 59234061 | ID=MS.gene49933.t1.exon2;Parent=MS.gene49933.t1 |
| chr6.4 | CDS | 59234061 | 59234190 | 59234061 | ID=cds.MS.gene49933.t1;Parent=MS.gene49933.t1 |
| chr6.4 | exon | 59236458 | 59236658 | 59236458 | ID=MS.gene49933.t1.exon3;Parent=MS.gene49933.t1 |
| chr6.4 | CDS | 59236458 | 59236658 | 59236458 | ID=cds.MS.gene49933.t1;Parent=MS.gene49933.t1 |
| chr6.4 | exon | 59236751 | 59236918 | 59236751 | ID=MS.gene49933.t1.exon4;Parent=MS.gene49933.t1 |
| chr6.4 | CDS | 59236751 | 59236918 | 59236751 | ID=cds.MS.gene49933.t1;Parent=MS.gene49933.t1 |
| chr6.4 | exon | 59238051 | 59238494 | 59238051 | ID=MS.gene49933.t1.exon5;Parent=MS.gene49933.t1 |
| chr6.4 | CDS | 59238051 | 59238494 | 59238051 | ID=cds.MS.gene49933.t1;Parent=MS.gene49933.t1 |
| Gene Sequence |
| Protein sequence |
