Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50107.t1 | RHN57038.1 | 98.4 | 504 | 8 | 0 | 1 | 504 | 113 | 616 | 1.40E-304 | 1054.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50107.t1 | Q0WSN2 | 66.8 | 512 | 151 | 7 | 8 | 504 | 21 | 528 | 4.2e-201 | 702.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50107.t1 | G7K212 | 98.4 | 504 | 8 | 0 | 1 | 504 | 1 | 504 | 1.0e-304 | 1054.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene50107.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50107.t1 | MTR_5g081160 | 98.413 | 504 | 8 | 0 | 1 | 504 | 1 | 504 | 0.0 | 1041 |
| MS.gene50107.t1 | MTR_3g069410 | 72.921 | 517 | 123 | 5 | 1 | 504 | 1 | 513 | 0.0 | 768 |
| MS.gene50107.t1 | MTR_5g018900 | 51.711 | 526 | 198 | 8 | 32 | 503 | 1 | 524 | 0.0 | 523 |
| MS.gene50107.t1 | MTR_1g021835 | 53.027 | 479 | 207 | 7 | 32 | 503 | 1 | 468 | 2.25e-177 | 507 |
| MS.gene50107.t1 | MTR_8g078410 | 51.866 | 536 | 189 | 9 | 32 | 503 | 1 | 531 | 7.81e-176 | 505 |
| MS.gene50107.t1 | MTR_1g021835 | 52.394 | 376 | 161 | 7 | 32 | 400 | 1 | 365 | 1.12e-135 | 399 |
| MS.gene50107.t1 | MTR_1g021835 | 49.524 | 315 | 146 | 4 | 32 | 340 | 1 | 308 | 6.64e-107 | 322 |
| MS.gene50107.t1 | MTR_5g018910 | 40.171 | 117 | 70 | 0 | 141 | 257 | 496 | 612 | 5.88e-23 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50107.t1 | AT2G39830 | 66.797 | 512 | 151 | 8 | 8 | 504 | 21 | 528 | 0.0 | 669 |
| MS.gene50107.t1 | AT2G39830 | 66.408 | 515 | 151 | 9 | 8 | 504 | 21 | 531 | 0.0 | 664 |
| MS.gene50107.t1 | AT2G39830 | 66.405 | 509 | 149 | 8 | 8 | 504 | 21 | 519 | 0.0 | 660 |
| MS.gene50107.t1 | AT2G39830 | 65.238 | 420 | 131 | 7 | 8 | 416 | 21 | 436 | 0.0 | 539 |
| MS.gene50107.t1 | AT4G36860 | 61.758 | 421 | 146 | 4 | 92 | 503 | 139 | 553 | 4.74e-180 | 517 |
| MS.gene50107.t1 | AT4G36860 | 61.758 | 421 | 146 | 4 | 92 | 503 | 163 | 577 | 1.43e-179 | 516 |
| MS.gene50107.t1 | AT1G19270 | 48.315 | 534 | 213 | 7 | 32 | 504 | 1 | 532 | 6.59e-172 | 495 |
| MS.gene50107.t1 | AT1G19270 | 48.315 | 534 | 213 | 7 | 32 | 504 | 1 | 532 | 6.59e-172 | 495 |
| MS.gene50107.t1 | AT4G36860 | 61.491 | 322 | 111 | 3 | 92 | 406 | 139 | 454 | 2.19e-138 | 407 |
| MS.gene50107.t1 | AT5G66610 | 50.696 | 359 | 167 | 5 | 142 | 497 | 73 | 424 | 9.39e-116 | 348 |
| MS.gene50107.t1 | AT5G66610 | 50.696 | 359 | 167 | 5 | 142 | 497 | 200 | 551 | 4.51e-115 | 351 |
| MS.gene50107.t1 | AT5G66620 | 49.180 | 366 | 165 | 5 | 142 | 496 | 285 | 640 | 1.73e-114 | 352 |
| MS.gene50107.t1 | AT5G66620 | 42.299 | 461 | 236 | 7 | 56 | 496 | 181 | 631 | 2.89e-114 | 351 |
| MS.gene50107.t1 | AT5G66620 | 42.299 | 461 | 236 | 7 | 56 | 496 | 181 | 631 | 2.89e-114 | 351 |
| MS.gene50107.t1 | AT5G66610 | 47.150 | 386 | 167 | 6 | 142 | 497 | 200 | 578 | 3.73e-109 | 337 |
| MS.gene50107.t1 | AT5G66630 | 46.175 | 366 | 173 | 7 | 142 | 496 | 346 | 698 | 2.05e-102 | 322 |
| MS.gene50107.t1 | AT5G66640 | 47.293 | 351 | 168 | 5 | 161 | 496 | 90 | 438 | 5.38e-101 | 311 |
| MS.gene50107.t1 | AT5G66640 | 47.293 | 351 | 168 | 5 | 161 | 496 | 90 | 438 | 5.38e-101 | 311 |
| MS.gene50107.t1 | AT5G66640 | 47.293 | 351 | 168 | 5 | 161 | 496 | 122 | 470 | 1.98e-100 | 310 |
| MS.gene50107.t1 | AT5G66640 | 47.293 | 351 | 168 | 5 | 161 | 496 | 121 | 469 | 2.14e-100 | 310 |
| MS.gene50107.t1 | AT5G17890 | 49.041 | 365 | 172 | 7 | 143 | 496 | 1240 | 1601 | 1.24e-97 | 323 |
| MS.gene50107.t1 | AT5G66640 | 48.308 | 325 | 153 | 4 | 187 | 496 | 7 | 331 | 3.95e-97 | 297 |
| MS.gene50107.t1 | AT5G66640 | 42.735 | 351 | 180 | 6 | 161 | 496 | 121 | 465 | 6.01e-84 | 268 |
| MS.gene50107.t1 | AT5G66640 | 42.735 | 351 | 180 | 6 | 161 | 496 | 122 | 466 | 6.31e-84 | 268 |
| MS.gene50107.t1 | AT5G66620 | 44.541 | 229 | 113 | 4 | 142 | 366 | 276 | 494 | 1.59e-62 | 213 |
Find 113 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAGCAAACTTCACATTT+TGG | 0.126071 | 5.4:+63760780 | None:intergenic |
| AGGCATAAACCTCTTGTTTC+TGG | 0.186251 | 5.4:+63759672 | None:intergenic |
| AATATGTGTATATACCTTTA+AGG | 0.205624 | 5.4:+63759173 | None:intergenic |
| GTCTCATGTTGAAAACAAAT+TGG | 0.214527 | 5.4:-63758927 | MS.gene50107:CDS |
| TTAAAACAAGATTTGTGATA+TGG | 0.216060 | 5.4:+63760816 | None:intergenic |
| CTGTATTCATTGGGATAAAA+TGG | 0.256062 | 5.4:+63761162 | None:intergenic |
| AATGAAGCTGTTAATAAATA+TGG | 0.258522 | 5.4:-63758836 | MS.gene50107:CDS |
| ACAGCAATTCTTGTTCTATA+TGG | 0.261118 | 5.4:-63759424 | MS.gene50107:CDS |
| CATGAGATGGACAATACTTT+TGG | 0.265205 | 5.4:+63760161 | None:intergenic |
| CATGCATGGTTACGCCTTAA+AGG | 0.286050 | 5.4:-63759187 | MS.gene50107:intron |
| AGTATAGATGCCACCCCTTT+TGG | 0.293022 | 5.4:-63760186 | MS.gene50107:CDS |
| GGAGAAAATGATGAAGATTA+TGG | 0.298017 | 5.4:-63761240 | MS.gene50107:CDS |
| AATGATTCTTCTCCAGCTTA+TGG | 0.306927 | 5.4:-63758878 | MS.gene50107:CDS |
| CTTTCTCATCCATGTATATA+TGG | 0.313577 | 5.4:-63762767 | MS.gene50107:intron |
| ATTGGAGGCCATAGACTTAT+AGG | 0.316467 | 5.4:-63759490 | MS.gene50107:CDS |
| AAGATTTCACCTGTATTCAT+TGG | 0.335163 | 5.4:+63761152 | None:intergenic |
| AACTACCTCGCGCTCGGTAA+TGG | 0.338884 | 5.4:+63760946 | None:intergenic |
| ATCAAACCAGCAGCATTTAT+AGG | 0.343784 | 5.4:+63760211 | None:intergenic |
| GAAAGTCTGGTTTCATGAAA+TGG | 0.348540 | 5.4:-63762236 | MS.gene50107:CDS |
| AACAAGAGGTTTATGCCTTT+CGG | 0.351720 | 5.4:-63759667 | MS.gene50107:CDS |
| ACGACCACTCCTTCCTCTAT+TGG | 0.353168 | 5.4:+63762188 | None:intergenic |
| GTGCATGGAATCTGCTATAA+TGG | 0.356084 | 5.4:-63759928 | MS.gene50107:CDS |
| ACTACCTCGCGCTCGGTAAT+GGG | 0.362527 | 5.4:+63760947 | None:intergenic |
| ATAATCTATGGAAATTGTTT+AGG | 0.366827 | 5.4:-63761025 | MS.gene50107:CDS |
| AGTCTATGGCCTCCAATTCT+TGG | 0.369796 | 5.4:+63759496 | None:intergenic |
| CAGAAGGAGAAAGAGGATTT+AGG | 0.374040 | 5.4:-63761429 | MS.gene50107:CDS |
| GCACTTAATGATGCTATTGT+TGG | 0.375277 | 5.4:-63759801 | MS.gene50107:CDS |
| ATGAAACCAGACTTTCTCTC+TGG | 0.376624 | 5.4:+63762243 | None:intergenic |
| CCATGCAATGTCACTTTCTT+CGG | 0.377621 | 5.4:-63761406 | MS.gene50107:CDS |
| TTCTCATGCCTATAAGTCTA+TGG | 0.380772 | 5.4:+63759482 | None:intergenic |
| AACCTCTTGTTTCTGGCAAA+TGG | 0.381781 | 5.4:+63759679 | None:intergenic |
| CATTAGCCCATCAAGGATAT+AGG | 0.386946 | 5.4:-63761269 | MS.gene50107:intron |
| ATGGCATGCAGGTTACTAAC+AGG | 0.396063 | 5.4:-63759235 | MS.gene50107:intron |
| CTCGAACATATTCGTTTGAC+TGG | 0.400738 | 5.4:-63758800 | MS.gene50107:CDS |
| CATAATAATCTCTGATTGAA+TGG | 0.404836 | 5.4:+63759880 | None:intergenic |
| CTGTAGTTGTGAAAGATTAG+AGG | 0.408619 | 5.4:-63760116 | MS.gene50107:intron |
| TGCAATCAGGAGATAATCTA+TGG | 0.410658 | 5.4:-63761037 | MS.gene50107:CDS |
| TGTTGTTTCAGATTCATAGA+AGG | 0.415721 | 5.4:-63759519 | MS.gene50107:intron |
| TTGTTTACCAAAGCTCTAGA+TGG | 0.420805 | 5.4:+63762123 | None:intergenic |
| GAATCTGCTATAATGGATAC+TGG | 0.421279 | 5.4:-63759921 | MS.gene50107:CDS |
| ATTCATAGAAGGCCAAGAAT+TGG | 0.426756 | 5.4:-63759508 | MS.gene50107:CDS |
| AGATTTCACCTGTATTCATT+GGG | 0.428419 | 5.4:+63761153 | None:intergenic |
| CATATGCCTTCCTCTACTTC+AGG | 0.435073 | 5.4:+63759061 | None:intergenic |
| TTCAAAGGTGGGTCCAATAG+AGG | 0.438064 | 5.4:-63762201 | MS.gene50107:CDS |
| TCAATCAGAGATTATTATGA+AGG | 0.445893 | 5.4:-63759876 | MS.gene50107:CDS |
| CAAGACATGCCTTCCTCTGC+AGG | 0.450171 | 5.4:+63762153 | None:intergenic |
| TCTTCTCCAGCTTATGGTGG+TGG | 0.452845 | 5.4:-63758872 | MS.gene50107:CDS |
| TCTCATGTTGAAAACAAATT+GGG | 0.452858 | 5.4:-63758926 | MS.gene50107:CDS |
| GCGTGCTCCATCTAGAGCTT+TGG | 0.454192 | 5.4:-63762130 | MS.gene50107:intron |
| TAAAATGGTGCAGGAGCATA+AGG | 0.458370 | 5.4:+63761177 | None:intergenic |
| TCACACCCAGAGAGAAAGTC+TGG | 0.460029 | 5.4:-63762249 | MS.gene50107:CDS |
| CAGATTCCTATAAATGCTGC+TGG | 0.468618 | 5.4:-63760217 | MS.gene50107:CDS |
| AGACTTTGCACCTTTCTTTG+AGG | 0.470152 | 5.4:+63758946 | None:intergenic |
| GAGTGGCATCGAAAGCAGTC+TGG | 0.476246 | 5.4:+63760980 | None:intergenic |
| ATGCAATGAGAGTTTGTTGC+TGG | 0.480588 | 5.4:+63758998 | None:intergenic |
| TGGAAATTGTTTAGGCTGCA+TGG | 0.497463 | 5.4:-63761017 | MS.gene50107:CDS |
| GAAGATATGAAGAGACCAAA+TGG | 0.499622 | 5.4:-63761381 | MS.gene50107:intron |
| TTCTCTTTCAACAAGAAGCA+TGG | 0.501914 | 5.4:+63759824 | None:intergenic |
| CTAAAACCACCACCATAAGC+TGG | 0.509878 | 5.4:+63758866 | None:intergenic |
| CTGCAGAGGAAGGCATGTCT+TGG | 0.516391 | 5.4:-63762152 | MS.gene50107:CDS |
| TAGAGCTCAGAAGGAGAAAG+AGG | 0.516816 | 5.4:-63761436 | MS.gene50107:CDS |
| ACCATGCATGCATCAACTCA+TGG | 0.520688 | 5.4:+63759200 | None:intergenic |
| TGATCGTGCTAGAGCTCAGA+AGG | 0.527771 | 5.4:-63761445 | MS.gene50107:CDS |
| TTATTTGCATTAGCCCATCA+AGG | 0.527904 | 5.4:-63761276 | MS.gene50107:intron |
| TCTCTGATTGAATGGTATAG+AGG | 0.533543 | 5.4:+63759888 | None:intergenic |
| GGATCAAACTACCTCGCGCT+CGG | 0.536169 | 5.4:+63760940 | None:intergenic |
| GCTGCTTCTTCCTCAAAGAA+AGG | 0.536522 | 5.4:-63758956 | MS.gene50107:CDS |
| CATAGAAGGCCAAGAATTGG+AGG | 0.541624 | 5.4:-63759505 | MS.gene50107:CDS |
| GTCAGGTTCTGTCATATATG+TGG | 0.544593 | 5.4:-63759039 | MS.gene50107:CDS |
| TCTCTTTCAACAAGAAGCAT+GGG | 0.545613 | 5.4:+63759825 | None:intergenic |
| AAGCTTGTGCTTAGAGTGCA+TGG | 0.547235 | 5.4:-63759943 | MS.gene50107:CDS |
| CCCATCAAGGATATAGGTGG+GGG | 0.548766 | 5.4:-63761263 | MS.gene50107:CDS |
| CACCATTTGCCAGAAACAAG+AGG | 0.548780 | 5.4:-63759681 | MS.gene50107:CDS |
| TCATTGGGATAAAATGGTGC+AGG | 0.553987 | 5.4:+63761168 | None:intergenic |
| TGAAACCAGACTTTCTCTCT+GGG | 0.553994 | 5.4:+63762244 | None:intergenic |
| CATTATGATCCTGCAGAGGA+AGG | 0.555932 | 5.4:-63762162 | MS.gene50107:CDS |
| CCGAAGAAAGTGACATTGCA+TGG | 0.560644 | 5.4:+63761406 | None:intergenic |
| AACATGTGTTCTTATTACAC+AGG | 0.561919 | 5.4:+63758770 | None:intergenic |
| GATTCTTCTCCAGCTTATGG+TGG | 0.562395 | 5.4:-63758875 | MS.gene50107:CDS |
| AGTAGAGGAAGGCATATGTC+AGG | 0.562990 | 5.4:-63759056 | MS.gene50107:CDS |
| CTATAGTATTTCGTATTCCG+AGG | 0.568127 | 5.4:+63759981 | None:intergenic |
| CCATGCATGCATCAACTCAT+GGG | 0.575521 | 5.4:+63759201 | None:intergenic |
| AGCCCATCAAGGATATAGGT+GGG | 0.576893 | 5.4:-63761265 | MS.gene50107:CDS |
| CCCATGAGTTGATGCATGCA+TGG | 0.580940 | 5.4:-63759201 | MS.gene50107:CDS |
| AGCAACAAACTCTCATTGCA+TGG | 0.581985 | 5.4:-63758996 | MS.gene50107:CDS |
| TCACAGTTTGCTCTTCCGAA+AGG | 0.583186 | 5.4:+63759652 | None:intergenic |
| AAATGATGAAGATTATGGAA+AGG | 0.584158 | 5.4:-63761235 | MS.gene50107:CDS |
| GTATTGTCATATTCATGAGA+TGG | 0.585321 | 5.4:+63760148 | None:intergenic |
| GCCCATCAAGGATATAGGTG+GGG | 0.591148 | 5.4:-63761264 | MS.gene50107:CDS |
| CAATCTCAGTCCTGAAGTAG+AGG | 0.592599 | 5.4:-63759071 | MS.gene50107:CDS |
| TGAGGAAGAAGCAGCAGCTG+TGG | 0.594186 | 5.4:+63758964 | None:intergenic |
| TAGCCCATCAAGGATATAGG+TGG | 0.597899 | 5.4:-63761266 | MS.gene50107:CDS |
| TGATTGATATGATCAGAAGA+AGG | 0.604305 | 5.4:+63762791 | None:intergenic |
| CATCAAGGATATAGGTGGGG+GGG | 0.609524 | 5.4:-63761261 | MS.gene50107:CDS |
| CATTGAACAGAAGACTATGT+GGG | 0.609543 | 5.4:-63761063 | MS.gene50107:intron |
| AATACTATAGACTCGAGGAC+GGG | 0.611229 | 5.4:-63759968 | MS.gene50107:CDS |
| CTCAGTCCTGAAGTAGAGGA+AGG | 0.619865 | 5.4:-63759067 | MS.gene50107:CDS |
| AATGGTGCAGGAGCATAAGG+AGG | 0.625823 | 5.4:+63761180 | None:intergenic |
| AGTAAAGTACCATATATACA+TGG | 0.626223 | 5.4:+63762758 | None:intergenic |
| TTCTCCCATTACCGAGCGCG+AGG | 0.628667 | 5.4:-63760951 | MS.gene50107:intron |
| AAGGTGGGTCCAATAGAGGA+AGG | 0.645391 | 5.4:-63762197 | MS.gene50107:CDS |
| ATTGAACAGAAGACTATGTG+GGG | 0.648467 | 5.4:-63761062 | MS.gene50107:intron |
| AAATACTATAGACTCGAGGA+CGG | 0.654015 | 5.4:-63759969 | MS.gene50107:CDS |
| GCATTGAACAGAAGACTATG+TGG | 0.658253 | 5.4:-63761064 | MS.gene50107:intron |
| TTGTTCTATATGGTCTACCA+AGG | 0.659611 | 5.4:-63759414 | MS.gene50107:intron |
| ACATGTGTTCTTATTACACA+GGG | 0.664721 | 5.4:+63758771 | None:intergenic |
| GGGTCCAATAGAGGAAGGAG+TGG | 0.672837 | 5.4:-63762192 | MS.gene50107:CDS |
| ATGGTGCAGGAGCATAAGGA+GGG | 0.678829 | 5.4:+63761181 | None:intergenic |
| CCATCAAGGATATAGGTGGG+GGG | 0.680331 | 5.4:-63761262 | MS.gene50107:CDS |
| TAATGGGAGAATGACAAGAG+TGG | 0.685159 | 5.4:+63760963 | None:intergenic |
| TACGAAATACTATAGACTCG+AGG | 0.695310 | 5.4:-63759973 | MS.gene50107:CDS |
| TCATCATTATGATCCTGCAG+AGG | 0.695986 | 5.4:-63762166 | MS.gene50107:CDS |
| TTGAACAGAAGACTATGTGG+GGG | 0.724066 | 5.4:-63761061 | MS.gene50107:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAATAATTGAATATAATA+TGG | + | chr5.4:63760044-63760063 | None:intergenic | 10.0% |
| !! | TATAGATTAAAGTTATTCAT+TGG | + | chr5.4:63761544-63761563 | None:intergenic | 15.0% |
| !!! | ATACTTTTTTGACTTATTTT+TGG | - | chr5.4:63759901-63759920 | MS.gene50107:CDS | 15.0% |
| !!! | ATTTTGCTATCATTTATAAT+TGG | - | chr5.4:63760480-63760499 | MS.gene50107:intron | 15.0% |
| !!! | TAAAATTGAAATGTTTTTAC+CGG | - | chr5.4:63762315-63762334 | MS.gene50107:intron | 15.0% |
| !!! | TTCATTTGATTTCATTAAAA+GGG | - | chr5.4:63759018-63759037 | MS.gene50107:CDS | 15.0% |
| !!! | TTTCATTTGATTTCATTAAA+AGG | - | chr5.4:63759017-63759036 | MS.gene50107:CDS | 15.0% |
| !!! | TTTTGTAATTTTTCTTAAGT+GGG | + | chr5.4:63758956-63758975 | None:intergenic | 15.0% |
| !!! | TTTTTGTAATTTTTCTTAAG+TGG | + | chr5.4:63758957-63758976 | None:intergenic | 15.0% |
| !! | AACAATATAGAGTAATTAAG+AGG | + | chr5.4:63761866-63761885 | None:intergenic | 20.0% |
| !! | AAGTTCAAATAATAGTTTCA+TGG | + | chr5.4:63758991-63759010 | None:intergenic | 20.0% |
| !! | AATATGTGTATATACCTTTA+AGG | + | chr5.4:63762411-63762430 | None:intergenic | 20.0% |
| !! | AATGAAGCTGTTAATAAATA+TGG | - | chr5.4:63762745-63762764 | MS.gene50107:intron | 20.0% |
| !! | AATTATGAAACAATTTAGAG+TGG | + | chr5.4:63761505-63761524 | None:intergenic | 20.0% |
| !! | ACAATACTATTGATGTAATT+AGG | - | chr5.4:63760112-63760131 | MS.gene50107:intron | 20.0% |
| !! | AGTATACTTAATAAAGTTTG+AGG | + | chr5.4:63759886-63759905 | None:intergenic | 20.0% |
| !! | AGTTCAAATAATAGTTTCAT+GGG | + | chr5.4:63758990-63759009 | None:intergenic | 20.0% |
| !! | ATAATCTATGGAAATTGTTT+AGG | - | chr5.4:63760556-63760575 | MS.gene50107:intron | 20.0% |
| !! | CTTATTGAATCATGAAAATT+TGG | - | chr5.4:63759285-63759304 | MS.gene50107:intron | 20.0% |
| !! | TTAAAACAAGATTTGTGATA+TGG | + | chr5.4:63760768-63760787 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTTTTTTGACTCA+AGG | - | chr5.4:63760075-63760094 | MS.gene50107:intron | 20.0% |
| !!! | TAAATTGATGATTCACTAAA+TGG | + | chr5.4:63762271-63762290 | None:intergenic | 20.0% |
| !!! | TGATCTACAATTTTTTCATA+AGG | + | chr5.4:63762239-63762258 | None:intergenic | 20.0% |
| !!! | TGATTCTTATTTGTTATGAA+TGG | - | chr5.4:63759522-63759541 | MS.gene50107:intron | 20.0% |
| !!! | TTTTCATATGAATCCAAAAA+AGG | - | chr5.4:63759087-63759106 | MS.gene50107:intron | 20.0% |
| ! | AAAATTAAGTACCAACCATT+TGG | + | chr5.4:63760218-63760237 | None:intergenic | 25.0% |
| ! | AAATGATGAAGATTATGGAA+AGG | - | chr5.4:63760346-63760365 | MS.gene50107:intron | 25.0% |
| ! | ATGAATGTAATAACATGTGT+CGG | - | chr5.4:63759219-63759238 | MS.gene50107:CDS | 25.0% |
| ! | ATTGAATCATGAAAATTTGG+TGG | - | chr5.4:63759288-63759307 | MS.gene50107:intron | 25.0% |
| ! | CAACAAACAAAAAAATAGTC+AGG | + | chr5.4:63760717-63760736 | None:intergenic | 25.0% |
| ! | CATAATAATCTCTGATTGAA+TGG | + | chr5.4:63761704-63761723 | None:intergenic | 25.0% |
| ! | CTAATGTCATAGTTCTTATA+AGG | + | chr5.4:63760904-63760923 | None:intergenic | 25.0% |
| ! | CTTATTATGTACTAAATCCA+CGG | - | chr5.4:63759727-63759746 | MS.gene50107:intron | 25.0% |
| ! | GAAGTAAATTATCAATGAGA+GGG | + | chr5.4:63761004-63761023 | None:intergenic | 25.0% |
| ! | GCATTATTTGGACTAATAAT+TGG | - | chr5.4:63759969-63759988 | MS.gene50107:CDS | 25.0% |
| ! | GCGTTAACATAGTAATTATT+TGG | + | chr5.4:63759771-63759790 | None:intergenic | 25.0% |
| ! | GGAAGATTAATCTTACAAAT+TGG | + | chr5.4:63760824-63760843 | None:intergenic | 25.0% |
| ! | TCAATCAGAGATTATTATGA+AGG | - | chr5.4:63761705-63761724 | MS.gene50107:intron | 25.0% |
| ! | TCTCATGTTGAAAACAAATT+GGG | - | chr5.4:63762655-63762674 | MS.gene50107:intron | 25.0% |
| ! | TGAAGAAAAATGAAATTGAG+TGG | + | chr5.4:63759486-63759505 | None:intergenic | 25.0% |
| ! | TGAAGTAAATTATCAATGAG+AGG | + | chr5.4:63761005-63761024 | None:intergenic | 25.0% |
| ! | TGTGTTAAAATATCATACAC+TGG | + | chr5.4:63761955-63761974 | None:intergenic | 25.0% |
| ! | TTGGAGTAAAATTGTGTAAA+GGG | + | chr5.4:63758933-63758952 | None:intergenic | 25.0% |
| ! | TTGTTCATCTTGAAATATGT+AGG | - | chr5.4:63762481-63762500 | MS.gene50107:intron | 25.0% |
| ! | TTTCATAAGGTAATTTCTGA+GGG | + | chr5.4:63762226-63762245 | None:intergenic | 25.0% |
| ! | TTTGAATATCAAAGTGCATA+AGG | + | chr5.4:63758904-63758923 | None:intergenic | 25.0% |
| !! | AGTAAAGTACCATATATACA+TGG | + | chr5.4:63758826-63758845 | None:intergenic | 25.0% |
| !! | CATATTTTTCATCCTTATGT+TGG | - | chr5.4:63762425-63762444 | MS.gene50107:intron | 25.0% |
| !! | TGTTTTCTTTGATTAGAATG+TGG | - | chr5.4:63761983-63762002 | MS.gene50107:intron | 25.0% |
| !! | TTTTCATAAGGTAATTTCTG+AGG | + | chr5.4:63762227-63762246 | None:intergenic | 25.0% |
| !!! | AAGTTATTCATTGGTTGTTT+TGG | + | chr5.4:63761535-63761554 | None:intergenic | 25.0% |
| !!! | CATTTTCTTATTAGCTTTTG+AGG | + | chr5.4:63762130-63762149 | None:intergenic | 25.0% |
| !!! | GTTTTTACCGGATATTTTTA+TGG | - | chr5.4:63762327-63762346 | MS.gene50107:intron | 25.0% |
| !!! | TGTGTGATTTTTTAGAAACA+TGG | - | chr5.4:63759657-63759676 | MS.gene50107:CDS | 25.0% |
| !!! | TTCTTATTTGTTATGAATGG+AGG | - | chr5.4:63759525-63759544 | MS.gene50107:intron | 25.0% |
| AAGATTTCACCTGTATTCAT+TGG | + | chr5.4:63760432-63760451 | None:intergenic | 30.0% | |
| AAGTGAGACTTAGCATTATT+TGG | - | chr5.4:63759957-63759976 | MS.gene50107:CDS | 30.0% | |
| AATTATCAATGAGAGGGAAA+TGG | + | chr5.4:63760998-63761017 | None:intergenic | 30.0% | |
| ACAAACACAAACATCAAACA+TGG | - | chr5.4:63759150-63759169 | MS.gene50107:intron | 30.0% | |
| ACAGCAATTCTTGTTCTATA+TGG | - | chr5.4:63762157-63762176 | MS.gene50107:CDS | 30.0% | |
| AGAAAAAGAGAAAAGAGAGA+AGG | + | chr5.4:63758851-63758870 | None:intergenic | 30.0% | |
| AGATTTCACCTGTATTCATT+GGG | + | chr5.4:63760431-63760450 | None:intergenic | 30.0% | |
| AGTCATGTATACTTAGAAGT+TGG | + | chr5.4:63762455-63762474 | None:intergenic | 30.0% | |
| ATATGTGTCTATGCTATAAG+TGG | + | chr5.4:63761125-63761144 | None:intergenic | 30.0% | |
| CTAAAAAATCACACACATGT+TGG | + | chr5.4:63759652-63759671 | None:intergenic | 30.0% | |
| CTGTATTCATTGGGATAAAA+TGG | + | chr5.4:63760422-63760441 | None:intergenic | 30.0% | |
| CTTTCTCATCCATGTATATA+TGG | - | chr5.4:63758814-63758833 | MS.gene50107:CDS | 30.0% | |
| GAAACATATGTGTAACTAAG+GGG | + | chr5.4:63759613-63759632 | None:intergenic | 30.0% | |
| GATCTCAAAATCTCATAAAG+AGG | + | chr5.4:63760665-63760684 | None:intergenic | 30.0% | |
| GGAAACATATGTGTAACTAA+GGG | + | chr5.4:63759614-63759633 | None:intergenic | 30.0% | |
| GGAGAAAATGATGAAGATTA+TGG | - | chr5.4:63760341-63760360 | MS.gene50107:intron | 30.0% | |
| GGTGTTTCATGTAAATAACA+TGG | + | chr5.4:63759127-63759146 | None:intergenic | 30.0% | |
| GTATTGTCATATTCATGAGA+TGG | + | chr5.4:63761436-63761455 | None:intergenic | 30.0% | |
| GTCTCATGTTGAAAACAAAT+TGG | - | chr5.4:63762654-63762673 | MS.gene50107:intron | 30.0% | |
| GTTAAATTAGAACCTCTTGA+AGG | + | chr5.4:63759266-63759285 | None:intergenic | 30.0% | |
| GTTGGAGTAAAATTGTGTAA+AGG | + | chr5.4:63758934-63758953 | None:intergenic | 30.0% | |
| TCAAAAAAGCTAGTCAAAAC+AGG | - | chr5.4:63761306-63761325 | MS.gene50107:intron | 30.0% | |
| TGATTGATATGATCAGAAGA+AGG | + | chr5.4:63758793-63758812 | None:intergenic | 30.0% | |
| TGGAAACATATGTGTAACTA+AGG | + | chr5.4:63759615-63759634 | None:intergenic | 30.0% | |
| TGTTGGAACTTATTGAATGT+TGG | + | chr5.4:63759635-63759654 | None:intergenic | 30.0% | |
| TTCATAAGGTAATTTCTGAG+GGG | + | chr5.4:63762225-63762244 | None:intergenic | 30.0% | |
| TTCATCTTGATGAGATCAAT+AGG | + | chr5.4:63759939-63759958 | None:intergenic | 30.0% | |
| TTGTATAAACTCTACCAAAC+AGG | - | chr5.4:63761258-63761277 | MS.gene50107:CDS | 30.0% | |
| TTTAGTGCTTGAAATAGAAC+AGG | - | chr5.4:63762287-63762306 | MS.gene50107:intron | 30.0% | |
| TTTGATGTTTGTGTTTGTGT+CGG | + | chr5.4:63759148-63759167 | None:intergenic | 30.0% | |
| ! | ATGAGATGGACAATACTTTT+GGG | + | chr5.4:63761422-63761441 | None:intergenic | 30.0% |
| ! | CATTTTATCCCAATGAATAC+AGG | - | chr5.4:63760420-63760439 | MS.gene50107:intron | 30.0% |
| ! | GTAATTTTTCTTAAGTGGGT+TGG | + | chr5.4:63758952-63758971 | None:intergenic | 30.0% |
| ! | TTAGTAAGCTTTTCAAAGGT+GGG | - | chr5.4:63759369-63759388 | MS.gene50107:intron | 30.0% |
| !! | ACTCTATATTGTTTCTGTCA+GGG | - | chr5.4:63761873-63761892 | MS.gene50107:intron | 30.0% |
| !! | ATAATTGGTAATGTGTGTTG+TGG | - | chr5.4:63760495-63760514 | MS.gene50107:intron | 30.0% |
| !! | TACTCTATATTGTTTCTGTC+AGG | - | chr5.4:63761872-63761891 | MS.gene50107:intron | 30.0% |
| !! | TGTTGTTTCAGATTCATAGA+AGG | - | chr5.4:63762062-63762081 | MS.gene50107:intron | 30.0% |
| !! | TTCAAAAGTCCAGCTTTATT+CGG | + | chr5.4:63760961-63760980 | None:intergenic | 30.0% |
| !!! | CTAGACAATCATACCTTTTT+TGG | + | chr5.4:63759103-63759122 | None:intergenic | 30.0% |
| !!! | GTGATTTTTTAGAAACATGG+TGG | - | chr5.4:63759660-63759679 | MS.gene50107:CDS | 30.0% |
| !!! | TAAGTTGTTTTTCGCAAACA+GGG | + | chr5.4:63761097-63761116 | None:intergenic | 30.0% |
| !!! | TTAAGTTGTTTTTCGCAAAC+AGG | + | chr5.4:63761098-63761117 | None:intergenic | 30.0% |
| AAATACTATAGACTCGAGGA+CGG | - | chr5.4:63761612-63761631 | MS.gene50107:intron | 35.0% | |
| AACAAGAGGTTTATGCCTTT+CGG | - | chr5.4:63761914-63761933 | MS.gene50107:intron | 35.0% | |
| AATGATTCTTCTCCAGCTTA+TGG | - | chr5.4:63762703-63762722 | MS.gene50107:intron | 35.0% | |
| AGAACAACTTGAGTAAGCAA+AGG | + | chr5.4:63760845-63760864 | None:intergenic | 35.0% | |
| ATAGACACATATTGCACAAG+TGG | - | chr5.4:63761133-63761152 | MS.gene50107:intron | 35.0% | |
| ATATGAAGAGACCAAATGGT+TGG | - | chr5.4:63760204-63760223 | MS.gene50107:CDS | 35.0% | |
| ATCAAACCAGCAGCATTTAT+AGG | + | chr5.4:63761373-63761392 | None:intergenic | 35.0% | |
| ATTCATAGAAGGCCAAGAAT+TGG | - | chr5.4:63762073-63762092 | MS.gene50107:intron | 35.0% | |
| ATTGAACAGAAGACTATGTG+GGG | - | chr5.4:63760519-63760538 | MS.gene50107:intron | 35.0% | |
| CATTGAACAGAAGACTATGT+GGG | - | chr5.4:63760518-63760537 | MS.gene50107:intron | 35.0% | |
| CTATAGTATTTCGTATTCCG+AGG | + | chr5.4:63761603-63761622 | None:intergenic | 35.0% | |
| CTGCATGCCATAAAAATATC+CGG | + | chr5.4:63762337-63762356 | None:intergenic | 35.0% | |
| CTGTAGTTGTGAAAGATTAG+AGG | - | chr5.4:63761465-63761484 | MS.gene50107:intron | 35.0% | |
| GAAGATATGAAGAGACCAAA+TGG | - | chr5.4:63760200-63760219 | MS.gene50107:CDS | 35.0% | |
| GAAGTTGGAATACCAACATA+AGG | + | chr5.4:63762440-63762459 | None:intergenic | 35.0% | |
| GCACTTAATGATGCTATTGT+TGG | - | chr5.4:63761780-63761799 | MS.gene50107:intron | 35.0% | |
| GTCAACTCCTATCTATCAAT+TGG | - | chr5.4:63761050-63761069 | MS.gene50107:CDS | 35.0% | |
| TACGAAATACTATAGACTCG+AGG | - | chr5.4:63761608-63761627 | MS.gene50107:intron | 35.0% | |
| TATGTTAACGCATTCTCTAG+TGG | - | chr5.4:63759780-63759799 | MS.gene50107:intron | 35.0% | |
| TCTCTGATTGAATGGTATAG+AGG | + | chr5.4:63761696-63761715 | None:intergenic | 35.0% | |
| TGCAATCAGGAGATAATCTA+TGG | - | chr5.4:63760544-63760563 | MS.gene50107:intron | 35.0% | |
| TGTTAGGCCAATTGATAGAT+AGG | + | chr5.4:63761060-63761079 | None:intergenic | 35.0% | |
| TTATTTGCATTAGCCCATCA+AGG | - | chr5.4:63760305-63760324 | MS.gene50107:intron | 35.0% | |
| TTCTCATGCCTATAAGTCTA+TGG | + | chr5.4:63762102-63762121 | None:intergenic | 35.0% | |
| TTCTCTTTCAACAAGAAGCA+TGG | + | chr5.4:63761760-63761779 | None:intergenic | 35.0% | |
| TTGTTCTATATGGTCTACCA+AGG | - | chr5.4:63762167-63762186 | MS.gene50107:CDS | 35.0% | |
| ! | CATGAGATGGACAATACTTT+TGG | + | chr5.4:63761423-63761442 | None:intergenic | 35.0% |
| ! | CTTAGTAAGCTTTTCAAAGG+TGG | - | chr5.4:63759368-63759387 | MS.gene50107:intron | 35.0% |
| ! | GAAAGTCTGGTTTCATGAAA+TGG | - | chr5.4:63759345-63759364 | MS.gene50107:intron | 35.0% |
| ! | GATCCAAGTTTTCTTTGTCA+GGG | - | chr5.4:63760736-63760755 | MS.gene50107:intron | 35.0% |
| ! | GGAAGCAAACTTCACATTTT+GGG | + | chr5.4:63760803-63760822 | None:intergenic | 35.0% |
| ! | TCTCTTTCAACAAGAAGCAT+GGG | + | chr5.4:63761759-63761778 | None:intergenic | 35.0% |
| ! | TGATCCAAGTTTTCTTTGTC+AGG | - | chr5.4:63760735-63760754 | MS.gene50107:intron | 35.0% |
| ! | TGGAAGCAAACTTCACATTT+TGG | + | chr5.4:63760804-63760823 | None:intergenic | 35.0% |
| ! | TGGCTTAGTAAGCTTTTCAA+AGG | - | chr5.4:63759365-63759384 | MS.gene50107:intron | 35.0% |
| !! | ATGAAAATTTGGTGGTGATC+AGG | - | chr5.4:63759296-63759315 | MS.gene50107:intron | 35.0% |
| !! | GAATCTGCTATAATGGATAC+TGG | - | chr5.4:63761660-63761679 | MS.gene50107:intron | 35.0% |
| !! | TGAAAATTTGGTGGTGATCA+GGG | - | chr5.4:63759297-63759316 | MS.gene50107:intron | 35.0% |
| !! | TTGTTTACCAAAGCTCTAGA+TGG | + | chr5.4:63759461-63759480 | None:intergenic | 35.0% |
| !!! | AAAAGTGCTTTTTGCTCACT+TGG | - | chr5.4:63760243-63760262 | MS.gene50107:intron | 35.0% |
| !!! | AATACTTTTGGGACCAAAAG+GGG | + | chr5.4:63761411-63761430 | None:intergenic | 35.0% |
| !!! | ACAATACTTTTGGGACCAAA+AGG | + | chr5.4:63761413-63761432 | None:intergenic | 35.0% |
| !!! | CAATACTTTTGGGACCAAAA+GGG | + | chr5.4:63761412-63761431 | None:intergenic | 35.0% |
| AACTATGGACAGTGGAAACT+TGG | - | chr5.4:63762191-63762210 | MS.gene50107:CDS | 40.0% | |
| AATACTATAGACTCGAGGAC+GGG | - | chr5.4:63761613-63761632 | MS.gene50107:intron | 40.0% | |
| ACATATGTGTAACTAAGGGG+AGG | + | chr5.4:63759610-63759629 | None:intergenic | 40.0% | |
| AGACTTTGCACCTTTCTTTG+AGG | + | chr5.4:63762638-63762657 | None:intergenic | 40.0% | |
| AGCAACAAACTCTCATTGCA+TGG | - | chr5.4:63762585-63762604 | MS.gene50107:intron | 40.0% | |
| ATGAAACCAGACTTTCTCTC+TGG | + | chr5.4:63759341-63759360 | None:intergenic | 40.0% | |
| ATGGTCTACCAAGGTAACTA+TGG | - | chr5.4:63762176-63762195 | MS.gene50107:CDS | 40.0% | |
| ATTGGAGGCCATAGACTTAT+AGG | - | chr5.4:63762091-63762110 | MS.gene50107:intron | 40.0% | |
| CAGAAGGAGAAAGAGGATTT+AGG | - | chr5.4:63760152-63760171 | MS.gene50107:CDS | 40.0% | |
| CAGATTCCTATAAATGCTGC+TGG | - | chr5.4:63761364-63761383 | MS.gene50107:intron | 40.0% | |
| CATTAGCCCATCAAGGATAT+AGG | - | chr5.4:63760312-63760331 | MS.gene50107:intron | 40.0% | |
| CTTCCCTGACAAAGAAAACT+TGG | + | chr5.4:63760742-63760761 | None:intergenic | 40.0% | |
| GATTTGTAAGAGAATCACCG+TGG | + | chr5.4:63759747-63759766 | None:intergenic | 40.0% | |
| GCATTGAACAGAAGACTATG+TGG | - | chr5.4:63760517-63760536 | MS.gene50107:intron | 40.0% | |
| GGCCTAAATGTGAAGATGTT+AGG | + | chr5.4:63761076-63761095 | None:intergenic | 40.0% | |
| GGCCTAACATCTTCACATTT+AGG | - | chr5.4:63761071-63761090 | MS.gene50107:intron | 40.0% | |
| GTCAGGTTCTGTCATATATG+TGG | - | chr5.4:63762542-63762561 | MS.gene50107:intron | 40.0% | |
| GTGCATGGAATCTGCTATAA+TGG | - | chr5.4:63761653-63761672 | MS.gene50107:intron | 40.0% | |
| TAATGGGAGAATGACAAGAG+TGG | + | chr5.4:63760621-63760640 | None:intergenic | 40.0% | |
| TCATCATTATGATCCTGCAG+AGG | - | chr5.4:63759415-63759434 | MS.gene50107:CDS | 40.0% | |
| TCATTGGGATAAAATGGTGC+AGG | + | chr5.4:63760416-63760435 | None:intergenic | 40.0% | |
| TCCTCTTCCATCTTAGTCAA+GGG | + | chr5.4:63760019-63760038 | None:intergenic | 40.0% | |
| TCGGAGACTAGAATGCTAAT+TGG | + | chr5.4:63760942-63760961 | None:intergenic | 40.0% | |
| TGAAACCAGACTTTCTCTCT+GGG | + | chr5.4:63759340-63759359 | None:intergenic | 40.0% | |
| TGGAAATTGTTTAGGCTGCA+TGG | - | chr5.4:63760564-63760583 | MS.gene50107:intron | 40.0% | |
| TTATCTTCCTCTTGAAGCCT+CGG | - | chr5.4:63761583-63761602 | MS.gene50107:intron | 40.0% | |
| TTCCATCTTAGTCAAGGGAA+TGG | + | chr5.4:63760014-63760033 | None:intergenic | 40.0% | |
| TTCCATTCCCTTGACTAAGA+TGG | - | chr5.4:63760009-63760028 | MS.gene50107:intron | 40.0% | |
| TTCCTCTTCCATCTTAGTCA+AGG | + | chr5.4:63760020-63760039 | None:intergenic | 40.0% | |
| TTCTAGTCTCCGAATAAAGC+TGG | - | chr5.4:63760949-63760968 | MS.gene50107:intron | 40.0% | |
| TTGAACAGAAGACTATGTGG+GGG | - | chr5.4:63760520-63760539 | MS.gene50107:intron | 40.0% | |
| ! | AGGCATAAACCTCTTGTTTC+TGG | + | chr5.4:63761912-63761931 | None:intergenic | 40.0% |
| ! | TAAAATGGTGCAGGAGCATA+AGG | + | chr5.4:63760407-63760426 | None:intergenic | 40.0% |
| ! | TAAGCACTTTTGAGCCTGTT+TGG | + | chr5.4:63761275-63761294 | None:intergenic | 40.0% |
| !! | AACCTCTTGTTTCTGGCAAA+TGG | + | chr5.4:63761905-63761924 | None:intergenic | 40.0% |
| !! | ATGCAATGAGAGTTTGTTGC+TGG | + | chr5.4:63762586-63762605 | None:intergenic | 40.0% |
| !! | CCATGCAATGTCACTTTCTT+CGG | - | chr5.4:63760175-63760194 | MS.gene50107:CDS | 40.0% |
| !! | CGGATATTTTTATGGCATGC+AGG | - | chr5.4:63762335-63762354 | MS.gene50107:intron | 40.0% |
| !! | GAAAATTTGGTGGTGATCAG+GGG | - | chr5.4:63759298-63759317 | MS.gene50107:intron | 40.0% |
| AAGCTTGTGCTTAGAGTGCA+TGG | - | chr5.4:63761638-63761657 | MS.gene50107:intron | 45.0% | |
| ACCAAGGTAACTATGGACAG+TGG | - | chr5.4:63762183-63762202 | MS.gene50107:CDS | 45.0% | |
| ACCATGCATGCATCAACTCA+TGG | + | chr5.4:63762384-63762403 | None:intergenic | 45.0% | |
| AGCCCATCAAGGATATAGGT+GGG | - | chr5.4:63760316-63760335 | MS.gene50107:intron | 45.0% | |
| AGTCTATGGCCTCCAATTCT+TGG | + | chr5.4:63762088-63762107 | None:intergenic | 45.0% | |
| ATGGCATGCAGGTTACTAAC+AGG | - | chr5.4:63762346-63762365 | MS.gene50107:intron | 45.0% | |
| CAATCTCAGTCCTGAAGTAG+AGG | - | chr5.4:63762510-63762529 | MS.gene50107:intron | 45.0% | |
| CACCATTTGCCAGAAACAAG+AGG | - | chr5.4:63761900-63761919 | MS.gene50107:intron | 45.0% | |
| CATAGAAGGCCAAGAATTGG+AGG | - | chr5.4:63762076-63762095 | MS.gene50107:intron | 45.0% | |
| CATATGCCTTCCTCTACTTC+AGG | + | chr5.4:63762523-63762542 | None:intergenic | 45.0% | |
| CATGCATGGTTACGCCTTAA+AGG | - | chr5.4:63762394-63762413 | MS.gene50107:intron | 45.0% | |
| CATTATGATCCTGCAGAGGA+AGG | - | chr5.4:63759419-63759438 | MS.gene50107:CDS | 45.0% | |
| CCATGCATGCATCAACTCAT+GGG | + | chr5.4:63762383-63762402 | None:intergenic | 45.0% | |
| CCGAAGAAAGTGACATTGCA+TGG | + | chr5.4:63760178-63760197 | None:intergenic | 45.0% | |
| CTAAAACCACCACCATAAGC+TGG | + | chr5.4:63762718-63762737 | None:intergenic | 45.0% | |
| GATTCTTCTCCAGCTTATGG+TGG | - | chr5.4:63762706-63762725 | MS.gene50107:intron | 45.0% | |
| GCTGCTTCTTCCTCAAAGAA+AGG | - | chr5.4:63762625-63762644 | MS.gene50107:intron | 45.0% | |
| TAGAGCTCAGAAGGAGAAAG+AGG | - | chr5.4:63760145-63760164 | MS.gene50107:CDS | 45.0% | |
| TAGCCCATCAAGGATATAGG+TGG | - | chr5.4:63760315-63760334 | MS.gene50107:intron | 45.0% | |
| TCCACTGTCCATAGTTACCT+TGG | + | chr5.4:63762187-63762206 | None:intergenic | 45.0% | |
| TCCCTTGACTAAGATGGAAG+AGG | - | chr5.4:63760015-63760034 | MS.gene50107:intron | 45.0% | |
| TTCAAAGGTGGGTCCAATAG+AGG | - | chr5.4:63759380-63759399 | MS.gene50107:intron | 45.0% | |
| ! | AGTAGAGGAAGGCATATGTC+AGG | - | chr5.4:63762525-63762544 | MS.gene50107:intron | 45.0% |
| ! | AGTATAGATGCCACCCCTTT+TGG | - | chr5.4:63761395-63761414 | MS.gene50107:CDS | 45.0% |
| ! | GAACCTCTTGAAGGCATGTT+CGG | + | chr5.4:63759257-63759276 | None:intergenic | 45.0% |
| ! | TCACAGTTTGCTCTTCCGAA+AGG | + | chr5.4:63761932-63761951 | None:intergenic | 45.0% |
| AAGGTGGGTCCAATAGAGGA+AGG | - | chr5.4:63759384-63759403 | MS.gene50107:intron | 50.0% | |
| ACACCGAACATGCCTTCAAG+AGG | - | chr5.4:63759251-63759270 | MS.gene50107:intron | 50.0% | |
| ACGACCACTCCTTCCTCTAT+TGG | + | chr5.4:63759396-63759415 | None:intergenic | 50.0% | |
| CATCAAGGATATAGGTGGGG+GGG | - | chr5.4:63760320-63760339 | MS.gene50107:intron | 50.0% | |
| CCATCAAGGATATAGGTGGG+GGG | - | chr5.4:63760319-63760338 | MS.gene50107:intron | 50.0% | |
| CCCATCAAGGATATAGGTGG+GGG | - | chr5.4:63760318-63760337 | MS.gene50107:intron | 50.0% | |
| CCCCCACCTATATCCTTGAT+GGG | + | chr5.4:63760321-63760340 | None:intergenic | 50.0% | |
| CTCAGTCCTGAAGTAGAGGA+AGG | - | chr5.4:63762514-63762533 | MS.gene50107:intron | 50.0% | |
| GCCCATCAAGGATATAGGTG+GGG | - | chr5.4:63760317-63760336 | MS.gene50107:intron | 50.0% | |
| TCACACCCAGAGAGAAAGTC+TGG | - | chr5.4:63759332-63759351 | MS.gene50107:intron | 50.0% | |
| TCGTATTCCGAGGCTTCAAG+AGG | + | chr5.4:63761593-63761612 | None:intergenic | 50.0% | |
| TCTTCTCCAGCTTATGGTGG+TGG | - | chr5.4:63762709-63762728 | MS.gene50107:intron | 50.0% | |
| TGATCGTGCTAGAGCTCAGA+AGG | - | chr5.4:63760136-63760155 | MS.gene50107:CDS | 50.0% | |
| TGTCGTGAACATTAGCGCAG+TGG | + | chr5.4:63759849-63759868 | None:intergenic | 50.0% | |
| ! | AATGGTGCAGGAGCATAAGG+AGG | + | chr5.4:63760404-63760423 | None:intergenic | 50.0% |
| ! | ATGGTGCAGGAGCATAAGGA+GGG | + | chr5.4:63760403-63760422 | None:intergenic | 50.0% |
| !! | CCCATGAGTTGATGCATGCA+TGG | - | chr5.4:63762380-63762399 | MS.gene50107:intron | 50.0% |
| !!! | ACTTTTGGGACCAAAAGGGG+TGG | + | chr5.4:63761408-63761427 | None:intergenic | 50.0% |
| AACTACCTCGCGCTCGGTAA+TGG | + | chr5.4:63760638-63760657 | None:intergenic | 55.0% | |
| ACTACCTCGCGCTCGGTAAT+GGG | + | chr5.4:63760637-63760656 | None:intergenic | 55.0% | |
| ACTATGTGGGGGCTGCAATC+AGG | - | chr5.4:63760531-63760550 | MS.gene50107:intron | 55.0% | |
| CAAGACATGCCTTCCTCTGC+AGG | + | chr5.4:63759431-63759450 | None:intergenic | 55.0% | |
| CCCCCCACCTATATCCTTGA+TGG | + | chr5.4:63760322-63760341 | None:intergenic | 55.0% | |
| GGATCAAACTACCTCGCGCT+CGG | + | chr5.4:63760644-63760663 | None:intergenic | 55.0% | |
| GGGTCCAATAGAGGAAGGAG+TGG | - | chr5.4:63759389-63759408 | MS.gene50107:intron | 55.0% | |
| TGAGGAAGAAGCAGCAGCTG+TGG | + | chr5.4:63762620-63762639 | None:intergenic | 55.0% | |
| ! | CTGCAGAGGAAGGCATGTCT+TGG | - | chr5.4:63759429-63759448 | MS.gene50107:CDS | 55.0% |
| ! | GAGTGGCATCGAAAGCAGTC+TGG | + | chr5.4:63760604-63760623 | None:intergenic | 55.0% |
| ! | GCGTGCTCCATCTAGAGCTT+TGG | - | chr5.4:63759451-63759470 | MS.gene50107:CDS | 55.0% |
| TTCTCCCATTACCGAGCGCG+AGG | - | chr5.4:63760630-63760649 | MS.gene50107:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 63758784 | 63762819 | 63758784 | ID=MS.gene50107 |
| chr5.4 | mRNA | 63758784 | 63762819 | 63758784 | ID=MS.gene50107.t1;Parent=MS.gene50107 |
| chr5.4 | exon | 63762768 | 63762819 | 63762768 | ID=MS.gene50107.t1.exon1;Parent=MS.gene50107.t1 |
| chr5.4 | CDS | 63762768 | 63762819 | 63762768 | ID=cds.MS.gene50107.t1;Parent=MS.gene50107.t1 |
| chr5.4 | exon | 63762131 | 63762285 | 63762131 | ID=MS.gene50107.t1.exon2;Parent=MS.gene50107.t1 |
| chr5.4 | CDS | 63762131 | 63762285 | 63762131 | ID=cds.MS.gene50107.t1;Parent=MS.gene50107.t1 |
| chr5.4 | exon | 63761382 | 63761469 | 63761382 | ID=MS.gene50107.t1.exon3;Parent=MS.gene50107.t1 |
| chr5.4 | CDS | 63761382 | 63761469 | 63761382 | ID=cds.MS.gene50107.t1;Parent=MS.gene50107.t1 |
| chr5.4 | exon | 63761162 | 63761285 | 63761162 | ID=MS.gene50107.t1.exon4;Parent=MS.gene50107.t1 |
| chr5.4 | CDS | 63761162 | 63761285 | 63761162 | ID=cds.MS.gene50107.t1;Parent=MS.gene50107.t1 |
| chr5.4 | exon | 63760952 | 63761075 | 63760952 | ID=MS.gene50107.t1.exon5;Parent=MS.gene50107.t1 |
| chr5.4 | CDS | 63760952 | 63761075 | 63760952 | ID=cds.MS.gene50107.t1;Parent=MS.gene50107.t1 |
| chr5.4 | exon | 63760776 | 63760859 | 63760776 | ID=MS.gene50107.t1.exon6;Parent=MS.gene50107.t1 |
| chr5.4 | CDS | 63760776 | 63760859 | 63760776 | ID=cds.MS.gene50107.t1;Parent=MS.gene50107.t1 |
| chr5.4 | exon | 63760117 | 63760236 | 63760117 | ID=MS.gene50107.t1.exon7;Parent=MS.gene50107.t1 |
| chr5.4 | CDS | 63760117 | 63760236 | 63760117 | ID=cds.MS.gene50107.t1;Parent=MS.gene50107.t1 |
| chr5.4 | exon | 63759791 | 63760003 | 63759791 | ID=MS.gene50107.t1.exon8;Parent=MS.gene50107.t1 |
| chr5.4 | CDS | 63759791 | 63760003 | 63759791 | ID=cds.MS.gene50107.t1;Parent=MS.gene50107.t1 |
| chr5.4 | exon | 63759647 | 63759709 | 63759647 | ID=MS.gene50107.t1.exon9;Parent=MS.gene50107.t1 |
| chr5.4 | CDS | 63759647 | 63759709 | 63759647 | ID=cds.MS.gene50107.t1;Parent=MS.gene50107.t1 |
| chr5.4 | exon | 63759415 | 63759530 | 63759415 | ID=MS.gene50107.t1.exon10;Parent=MS.gene50107.t1 |
| chr5.4 | CDS | 63759415 | 63759530 | 63759415 | ID=cds.MS.gene50107.t1;Parent=MS.gene50107.t1 |
| chr5.4 | exon | 63759188 | 63759246 | 63759188 | ID=MS.gene50107.t1.exon11;Parent=MS.gene50107.t1 |
| chr5.4 | CDS | 63759188 | 63759246 | 63759188 | ID=cds.MS.gene50107.t1;Parent=MS.gene50107.t1 |
| chr5.4 | exon | 63758784 | 63759100 | 63758784 | ID=MS.gene50107.t1.exon12;Parent=MS.gene50107.t1 |
| chr5.4 | CDS | 63758784 | 63759100 | 63758784 | ID=cds.MS.gene50107.t1;Parent=MS.gene50107.t1 |
| Gene Sequence |
| Protein sequence |
