AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50193

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50193.t1 MTR_0405s0060 62.687 134 35 3 10 143 37 155 1.19e-40 137
MS.gene50193.t1 MTR_5g024180 68.354 79 12 3 19 95 11 78 2.99e-25 93.6
MS.gene50193.t1 MTR_5g024180 68.354 79 12 3 19 95 48 115 3.05e-25 94.7
MS.gene50193.t1 MTR_4g072090 62.500 72 17 1 74 145 332 393 1.29e-21 90.5
MS.gene50193.t1 MTR_4g072090 78.571 56 12 0 90 145 338 393 3.05e-19 84.0
MS.gene50193.t1 MTR_1g023690 69.091 55 17 0 90 144 365 419 2.71e-15 72.8
MS.gene50193.t1 MTR_5g071680 57.609 92 15 3 28 119 75 142 4.00e-14 65.9
MS.gene50193.t1 MTR_2g099050 55.000 60 27 0 86 145 195 254 2.58e-13 67.0
MS.gene50193.t1 MTR_6g034945 49.333 75 26 1 96 158 135 209 3.42e-13 66.2
MS.gene50193.t1 MTR_3g115580 57.143 56 22 1 20 73 58 113 6.55e-13 63.2
MS.gene50193.t1 MTR_7g082820 57.143 56 23 1 19 73 25 80 6.54e-12 60.1
MS.gene50193.t1 MTR_3g467120 60.784 51 20 0 95 145 160 210 1.43e-11 61.6
MS.gene50193.t1 MTR_5g075390 63.265 49 18 0 97 145 144 192 1.98e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50193.t1 AT2G21230 47.423 97 35 3 67 157 334 420 7.86e-18 79.7
MS.gene50193.t1 AT2G21230 47.423 97 35 3 67 157 334 420 1.15e-17 79.3
MS.gene50193.t1 AT2G21230 47.423 97 35 3 67 157 334 420 1.15e-17 79.3
MS.gene50193.t1 AT2G21230 47.423 97 35 3 67 157 334 420 1.21e-17 79.3
MS.gene50193.t1 AT4G38900 69.643 56 17 0 90 145 372 427 1.23e-16 76.6
MS.gene50193.t1 AT4G38900 69.643 56 17 0 90 145 372 427 1.23e-16 76.6
MS.gene50193.t1 AT4G38900 62.903 62 17 1 90 145 372 433 1.94e-14 70.1
MS.gene50193.t1 AT1G20693 60.714 56 20 1 20 73 51 106 2.22e-14 66.6
MS.gene50193.t1 AT1G20693 60.714 56 20 1 20 73 51 106 3.43e-14 66.2
MS.gene50193.t1 AT1G20693 60.714 56 20 1 20 73 51 106 3.50e-14 66.2
MS.gene50193.t1 AT1G20696 57.143 56 22 1 20 73 6 61 1.93e-13 63.2
MS.gene50193.t1 AT1G20696 57.143 56 22 1 20 73 6 61 2.50e-13 62.8
MS.gene50193.t1 AT1G20696 57.143 56 22 1 20 73 48 103 5.05e-13 63.2
MS.gene50193.t1 AT1G20696 57.143 56 22 1 20 73 48 103 7.47e-13 62.8
MS.gene50193.t1 AT1G20696 57.143 56 22 1 20 73 48 103 7.70e-13 62.4
MS.gene50193.t1 AT1G06850 64.706 51 18 0 95 145 131 181 1.76e-12 63.5
MS.gene50193.t1 AT2G40620 47.945 73 34 1 77 145 109 181 3.70e-12 63.5
MS.gene50193.t1 AT1G06070 63.265 49 18 0 97 145 195 243 3.98e-12 63.5
MS.gene50193.t1 AT1G06850 64.706 51 18 0 95 145 131 181 5.40e-12 62.8
MS.gene50193.t1 AT1G43700 50.820 61 28 1 100 160 182 240 3.02e-11 60.8
MS.gene50193.t1 AT2G31370 38.889 90 51 2 56 145 149 234 6.07e-11 60.1
MS.gene50193.t1 AT2G31370 38.889 90 51 2 56 145 149 234 6.07e-11 60.1
MS.gene50193.t1 AT2G31370 38.889 90 51 2 56 145 149 234 6.07e-11 60.1
MS.gene50193.t1 AT2G31370 38.889 90 51 2 56 145 149 234 6.07e-11 60.1
MS.gene50193.t1 AT2G31370 38.889 90 51 2 56 145 149 234 6.07e-11 60.1
MS.gene50193.t1 AT2G31370 38.889 90 51 2 56 145 149 234 6.07e-11 60.1
MS.gene50193.t1 AT2G31370 55.357 56 25 0 90 145 179 234 8.52e-11 59.7

Find 27 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGGTTATTTCAGGATTT+TGG 0.136650 5.2:+60490204 MS.gene50193:intron
AAGCAATTGTTGACATTAAA+AGG 0.197721 5.2:+60491460 MS.gene50193:CDS
ATGCGTGCTTACATACAATA+TGG 0.283058 5.2:+60489846 MS.gene50193:CDS
TTCAGAGTTGAAGAAAATTA+TGG 0.315927 5.2:+60490057 MS.gene50193:CDS
TTGAATTAGGTTGGGAAAGC+TGG 0.357164 5.2:+60489622 MS.gene50193:intron
ACTCTTCCCTCAGTTCTTGA+TGG 0.361138 5.2:-60489174 None:intergenic
ACAACAACGGATTTGTTGCT+TGG 0.371043 5.2:-60489504 None:intergenic
AAGAAATGGAATGGATATAA+AGG 0.377146 5.2:+60489649 MS.gene50193:CDS
GCACAAGATGCGATACATTT+CGG 0.415915 5.2:+60490258 MS.gene50193:CDS
GTATCGCATCTTGTGCTCAT+TGG 0.416046 5.2:-60490251 None:intergenic
GAAAGTTTCTGAGATTGTTA+TGG 0.455865 5.2:+60490087 MS.gene50193:CDS
TTCTCAGCCTTAGCAATGAA+TGG 0.462645 5.2:-60489798 None:intergenic
GGAAAGCTGGTAGAAAGAAA+TGG 0.470505 5.2:+60489635 MS.gene50193:CDS
TGCTAAGGCTGAGAAGTTGA+AGG 0.526965 5.2:+60489806 MS.gene50193:CDS
GCTGGTAGAAAGAAATGGAA+TGG 0.530885 5.2:+60489640 MS.gene50193:CDS
TGCGTGCTTACATACAATAT+GGG 0.536904 5.2:+60489847 MS.gene50193:CDS
TAAGGCTCCATTCATTGCTA+AGG 0.564958 5.2:+60489791 MS.gene50193:CDS
CACTAGCCATCAAGAACTGA+GGG 0.584941 5.2:+60489168 MS.gene50193:CDS
CATTTCGGAGCTAGAACACA+AGG 0.586933 5.2:+60490273 MS.gene50193:CDS
TGTTATGGCTGATCTGAAGC+GGG 0.592226 5.2:+60490102 MS.gene50193:CDS
TTGTTATGGCTGATCTGAAG+CGG 0.602725 5.2:+60490101 MS.gene50193:CDS
CTGATCTGAAGCGGGCCAAG+AGG 0.613233 5.2:+60490110 MS.gene50193:CDS
AAGCAACAAATCCGTTGTTG+TGG 0.613939 5.2:+60489506 MS.gene50193:CDS
CACAAAACTCACCACAACAA+CGG 0.616516 5.2:-60489517 None:intergenic
TTAGGTCTGAATTCAGAGAG+AGG 0.643958 5.2:+60489466 MS.gene50193:intron
GCACTAGCCATCAAGAACTG+AGG 0.647902 5.2:+60489167 MS.gene50193:CDS
TAAGGCTGAGAAGTTGAAGG+AGG 0.663922 5.2:+60489809 MS.gene50193:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATTTATGATAGATTAA+TGG + chr5.2:60491316-60491335 MS.gene50193:intron 10.0%
!! AAAAATTCATTCTTCTTATT+AGG - chr5.2:60491599-60491618 None:intergenic 15.0%
!! ATTGTATATGAAAATAACAA+TGG - chr5.2:60491909-60491928 None:intergenic 15.0%
!! TAAATATCAATATTAAGAGA+CGG - chr5.2:60491535-60491554 None:intergenic 15.0%
!! TTGAATTTATTGTTAAAGAA+TGG - chr5.2:60490898-60490917 None:intergenic 15.0%
!!! ATTTTTGTTTTGTGATTTTT+AGG + chr5.2:60489448-60489467 MS.gene50193:intron 15.0%
!!! CTTATTGATTTAAAAAGAAA+AGG + chr5.2:60490945-60490964 MS.gene50193:intron 15.0%
!!! CTTTTCTTTTTAAATCAATA+AGG - chr5.2:60490947-60490966 None:intergenic 15.0%
!!! GGAAATTTATTACTTTTTTT+AGG + chr5.2:60490966-60490985 MS.gene50193:intron 15.0%
!!! TTTATGTGTATTTTAAGATA+AGG + chr5.2:60489773-60489792 MS.gene50193:intron 15.0%
!! AAATATCAATATTAAGAGAC+GGG - chr5.2:60491534-60491553 None:intergenic 20.0%
!! AAATCATAATAGAGTTTGTA+TGG - chr5.2:60491080-60491099 None:intergenic 20.0%
!! AATCATAATAGAGTTTGTAT+GGG - chr5.2:60491079-60491098 None:intergenic 20.0%
!! AGATTAAGAACTAAAATACT+TGG - chr5.2:60491678-60491697 None:intergenic 20.0%
!! ATGTTGCTATACAATATATT+TGG + chr5.2:60490757-60490776 MS.gene50193:intron 20.0%
!! CAATTAATAATATTGGACTA+AGG - chr5.2:60491508-60491527 None:intergenic 20.0%
!! TAAAATGTTCCTACTTAAAA+TGG + chr5.2:60491832-60491851 MS.gene50193:intron 20.0%
!! TGTTATCTAAATACAAAAGT+AGG - chr5.2:60490598-60490617 None:intergenic 20.0%
!! TTATGACACTAATTTCTTTA+TGG + chr5.2:60490796-60490815 MS.gene50193:intron 20.0%
!! TTATTAACTTTCTGATAGAA+TGG + chr5.2:60491200-60491219 MS.gene50193:intron 20.0%
!! TTCCTAAAAATCAAATTCAA+CGG - chr5.2:60489559-60489578 None:intergenic 20.0%
!! TTTAGTTAGTAATGTCAATA+TGG + chr5.2:60490157-60490176 MS.gene50193:intron 20.0%
!!! AATTTGACTTGGATATTTTT+TGG + chr5.2:60490186-60490205 MS.gene50193:intron 20.0%
!!! AATTTTTAACAAGAGTCATA+TGG + chr5.2:60491566-60491585 MS.gene50193:intron 20.0%
!!! ATTTGACTTGGATATTTTTT+GGG + chr5.2:60490187-60490206 MS.gene50193:intron 20.0%
!!! GCATTTAAAATTTTTTGTTC+AGG + chr5.2:60491985-60492004 MS.gene50193:intron 20.0%
!!! TAACTTCAACTTACTATTTT+GGG - chr5.2:60490526-60490545 None:intergenic 20.0%
!!! TTAACTTCAACTTACTATTT+TGG - chr5.2:60490527-60490546 None:intergenic 20.0%
!!! TTGAAGATGAACAATTTTTA+TGG - chr5.2:60489202-60489221 None:intergenic 20.0%
! AAGAAATGGAATGGATATAA+AGG + chr5.2:60489649-60489668 MS.gene50193:CDS 25.0%
! AAGCAATTGTTGACATTAAA+AGG + chr5.2:60491460-60491479 MS.gene50193:CDS 25.0%
! ATAATCAAATCGAACTTCAA+CGG - chr5.2:60489424-60489443 None:intergenic 25.0%
! ATGGATATAAAGGTTGAATT+AGG + chr5.2:60489659-60489678 MS.gene50193:intron 25.0%
! ATTTACGGTGAATTTGAATT+AGG + chr5.2:60489609-60489628 MS.gene50193:intron 25.0%
! CAAAAGTAGGTTAAAATGAA+AGG - chr5.2:60490585-60490604 None:intergenic 25.0%
! CAAATTACCAAACTAAAACA+CGG - chr5.2:60490367-60490386 None:intergenic 25.0%
! CGGGTTACAATTAATAATAT+TGG - chr5.2:60491515-60491534 None:intergenic 25.0%
! GATGAGATTCTTCAAATTAT+TGG - chr5.2:60490832-60490851 None:intergenic 25.0%
! TATAAAGGTTGAATTAGGTT+AGG + chr5.2:60489664-60489683 MS.gene50193:intron 25.0%
! TATTTAGATAACATGAGCAA+TGG + chr5.2:60490605-60490624 MS.gene50193:intron 25.0%
! TTAATGGAGATAAGTTAAGT+AGG + chr5.2:60491332-60491351 MS.gene50193:intron 25.0%
! TTCAAAATTGAATGAACTGA+AGG + chr5.2:60489217-60489236 MS.gene50193:intron 25.0%
! TTCAGAGTTGAAGAAAATTA+TGG + chr5.2:60490057-60490076 MS.gene50193:CDS 25.0%
!! AATTTTATTCAGTGAAACAG+AGG - chr5.2:60489707-60489726 None:intergenic 25.0%
!! ATTTTAAATGCAAAAGCAAG+AGG - chr5.2:60491976-60491995 None:intergenic 25.0%
!! TTTAAGTTTATGTGTTGTTC+TGG + chr5.2:60490711-60490730 MS.gene50193:intron 25.0%
!!! GATATTTTTTGGGTTATTTC+AGG + chr5.2:60490197-60490216 MS.gene50193:intron 25.0%
!!! GTAGGTTTTAACTACAAAAT+TGG + chr5.2:60491350-60491369 MS.gene50193:intron 25.0%
!!! TAAAGAGCATTAAGGAAAAA+AGG - chr5.2:60491879-60491898 None:intergenic 25.0%
!!! TACCGTTGAATTTGATTTTT+AGG + chr5.2:60489554-60489573 MS.gene50193:intron 25.0%
!!! TCTTTACGTTTTTTTAGCTT+CGG + chr5.2:60489355-60489374 MS.gene50193:intron 25.0%
!!! TGAAGAGCATTAAAGAAAAA+AGG - chr5.2:60491769-60491788 None:intergenic 25.0%
!!! TTCCACAATGATAATGTTTT+CGG + chr5.2:60490496-60490515 MS.gene50193:intron 25.0%
!!! TTTACTGCTCTTATTTTACT+TGG + chr5.2:60489910-60489929 MS.gene50193:intron 25.0%
AATGAAATTACCACACAAAC+TGG - chr5.2:60490693-60490712 None:intergenic 30.0%
ACTTTAGTGATAAGAATGTG+AGG + chr5.2:60491270-60491289 MS.gene50193:intron 30.0%
GTGCTAAAAATTGTTCGAAT+CGG + chr5.2:60489268-60489287 MS.gene50193:intron 30.0%
GTTAGTAATGTCAATATGGA+TGG + chr5.2:60490161-60490180 MS.gene50193:intron 30.0%
TAAGCCTTCAATTGATATTG+TGG + chr5.2:60490407-60490426 MS.gene50193:intron 30.0%
TACTATTGATCTAGGAAAGA+AGG - chr5.2:60491123-60491142 None:intergenic 30.0%
TATGACACTACTATTGATCT+AGG - chr5.2:60491131-60491150 None:intergenic 30.0%
TTGGACTAAGGTAACAAATA+AGG - chr5.2:60491496-60491515 None:intergenic 30.0%
TTTGAAGAATCTCATCTCAT+TGG + chr5.2:60490836-60490855 MS.gene50193:intron 30.0%
! CTTCGTTTTCATGTAAGATT+CGG + chr5.2:60489246-60489265 MS.gene50193:intron 30.0%
! GAGTTTTCTAACGTGATTTA+CGG + chr5.2:60489594-60489613 MS.gene50193:intron 30.0%
! TAACTGTTCACGAATTTGTT+CGG + chr5.2:60489294-60489313 MS.gene50193:intron 30.0%
! TATGGATGGTTAATTTGACT+TGG + chr5.2:60490175-60490194 MS.gene50193:intron 30.0%
! TGGTGTGTTTTGTAAAATTG+TGG + chr5.2:60490427-60490446 MS.gene50193:intron 30.0%
! TGTGTTTTGTAAAATTGTGG+TGG + chr5.2:60490430-60490449 MS.gene50193:intron 30.0%
!! AGTGATTGACCATTTTAAGT+AGG - chr5.2:60491844-60491863 None:intergenic 30.0%
!! GAAAGTTTCTGAGATTGTTA+TGG + chr5.2:60490087-60490106 MS.gene50193:CDS 30.0%
!! TTTGGGTTATTTCAGGATTT+TGG + chr5.2:60490204-60490223 MS.gene50193:intron 30.0%
AATTCAATTACAGCACCTCT+TGG - chr5.2:60490128-60490147 None:intergenic 35.0%
ACAATTTACTTTGTTGCAGG+TGG + chr5.2:60490317-60490336 MS.gene50193:intron 35.0%
ACGGTGAATTTGAATTAGGT+TGG + chr5.2:60489613-60489632 MS.gene50193:intron 35.0%
ACGTGAAAGCTACTTATTGT+AGG + chr5.2:60490465-60490484 MS.gene50193:intron 35.0%
ATAGACTGAGAAGAATGCTT+CGG + chr5.2:60489975-60489994 MS.gene50193:intron 35.0%
ATATCAGACATGACATGATG+CGG - chr5.2:60491722-60491741 None:intergenic 35.0%
ATGCGTGCTTACATACAATA+TGG + chr5.2:60489846-60489865 MS.gene50193:CDS 35.0%
CAATTTACTTTGTTGCAGGT+GGG + chr5.2:60490318-60490337 MS.gene50193:intron 35.0%
CACACCACAATATCAATTGA+AGG - chr5.2:60490414-60490433 None:intergenic 35.0%
CATAATAGAGTTTGTATGGG+TGG - chr5.2:60491076-60491095 None:intergenic 35.0%
CGGTGAATTTGAATTAGGTT+GGG + chr5.2:60489614-60489633 MS.gene50193:intron 35.0%
CTGTTTGTTTGCTTAGTTCA+GGG + chr5.2:60491037-60491056 MS.gene50193:intron 35.0%
GCAATGGAGTAAACTCAATA+TGG + chr5.2:60490621-60490640 MS.gene50193:intron 35.0%
GTATGTACATTCTGCAGATA+AGG + chr5.2:60491403-60491422 MS.gene50193:intron 35.0%
GTCCGAAAACATTATCATTG+TGG - chr5.2:60490501-60490520 None:intergenic 35.0%
TCTGTTTGTTTGCTTAGTTC+AGG + chr5.2:60491036-60491055 MS.gene50193:intron 35.0%
TGCACAATTTACTTTGTTGC+AGG + chr5.2:60490314-60490333 MS.gene50193:intron 35.0%
TGCGTGCTTACATACAATAT+GGG + chr5.2:60489847-60489866 MS.gene50193:CDS 35.0%
TTAAATGCAAAAGCAAGAGG+AGG - chr5.2:60491973-60491992 None:intergenic 35.0%
! AAATTGTGCAGAAAGTGTAG+TGG - chr5.2:60490304-60490323 None:intergenic 35.0%
! GTTTATGTGTTGTTCTGGTA+TGG + chr5.2:60490716-60490735 MS.gene50193:intron 35.0%
! GTTTGAGTGTGTTGATACTA+AGG - chr5.2:60491252-60491271 None:intergenic 35.0%
! TCTCACTTCATCGAAGATTT+TGG + chr5.2:60491623-60491642 MS.gene50193:intron 35.0%
!! GCTAGACATAAAGAGCATTA+AGG - chr5.2:60491887-60491906 None:intergenic 35.0%
!!! TGTGAAACCGTGTTTTAGTT+TGG + chr5.2:60490357-60490376 MS.gene50193:intron 35.0%
AAGCAACAAATCCGTTGTTG+TGG + chr5.2:60489506-60489525 MS.gene50193:CDS 40.0%
AAGGCATGTGAAGTAGGATA+TGG - chr5.2:60491104-60491123 None:intergenic 40.0%
AATAGAGTTTGTATGGGTGG+AGG - chr5.2:60491073-60491092 None:intergenic 40.0%
CACAAAACTCACCACAACAA+CGG - chr5.2:60489520-60489539 None:intergenic 40.0%
GCACAAGATGCGATACATTT+CGG + chr5.2:60490258-60490277 MS.gene50193:CDS 40.0%
GCTGGTAGAAAGAAATGGAA+TGG + chr5.2:60489640-60489659 MS.gene50193:CDS 40.0%
GGAAAGCTGGTAGAAAGAAA+TGG + chr5.2:60489635-60489654 MS.gene50193:CDS 40.0%
GTTGAAGTTAACACAGATGC+AGG + chr5.2:60490536-60490555 MS.gene50193:intron 40.0%
TAAGGCTCCATTCATTGCTA+AGG + chr5.2:60489791-60489810 MS.gene50193:CDS 40.0%
TGGAGTGCAGAATTGATACT+TGG + chr5.2:60490641-60490660 MS.gene50193:intron 40.0%
TTAGGTCTGAATTCAGAGAG+AGG + chr5.2:60489466-60489485 MS.gene50193:intron 40.0%
TTCTCAGCCTTAGCAATGAA+TGG - chr5.2:60489801-60489820 None:intergenic 40.0%
TTGTTATGGCTGATCTGAAG+CGG + chr5.2:60490101-60490120 MS.gene50193:CDS 40.0%
! TTTTGTGAGTCCAGTTTGTG+TGG + chr5.2:60490680-60490699 MS.gene50193:intron 40.0%
!! ACAACAACGGATTTGTTGCT+TGG - chr5.2:60489507-60489526 None:intergenic 40.0%
!! TTGAATTAGGTTGGGAAAGC+TGG + chr5.2:60489622-60489641 MS.gene50193:intron 40.0%
AAGAATGCTTCGGAGGAAGA+AGG + chr5.2:60489985-60490004 MS.gene50193:intron 45.0%
ACTCTTCCCTCAGTTCTTGA+TGG - chr5.2:60489177-60489196 None:intergenic 45.0%
AGCTTCGGTAAAGTTCGAGT+CGG + chr5.2:60489370-60489389 MS.gene50193:intron 45.0%
CACTAGCCATCAAGAACTGA+GGG + chr5.2:60489168-60489187 MS.gene50193:CDS 45.0%
CATTTCGGAGCTAGAACACA+AGG + chr5.2:60490273-60490292 MS.gene50193:CDS 45.0%
GTATCGCATCTTGTGCTCAT+TGG - chr5.2:60490254-60490273 None:intergenic 45.0%
TAAGGCTGAGAAGTTGAAGG+AGG + chr5.2:60489809-60489828 MS.gene50193:CDS 45.0%
TGCTAAGGCTGAGAAGTTGA+AGG + chr5.2:60489806-60489825 MS.gene50193:CDS 45.0%
! GGAAAGAAGGCATGTGAAGT+AGG - chr5.2:60491110-60491129 None:intergenic 45.0%
! GTTCTGGTATGGTACTGAGT+TGG + chr5.2:60490727-60490746 MS.gene50193:intron 45.0%
! TGTTATGGCTGATCTGAAGC+GGG + chr5.2:60490102-60490121 MS.gene50193:CDS 45.0%
AAGTAGCTTTCACGTCAGCG+TGG - chr5.2:60490460-60490479 None:intergenic 50.0%
GACTGAGAAGAATGCTTCGG+AGG + chr5.2:60489978-60489997 MS.gene50193:intron 50.0%
GCACTAGCCATCAAGAACTG+AGG + chr5.2:60489167-60489186 MS.gene50193:CDS 50.0%
! CTGATCTGAAGCGGGCCAAG+AGG + chr5.2:60490110-60490129 MS.gene50193:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 60489142 60492010 60489142 ID=MS.gene50193
chr5.2 mRNA 60489142 60492010 60489142 ID=MS.gene50193.t1;Parent=MS.gene50193
chr5.2 exon 60489142 60489194 60489142 ID=MS.gene50193.t1.exon1;Parent=MS.gene50193.t1
chr5.2 CDS 60489142 60489194 60489142 ID=cds.MS.gene50193.t1;Parent=MS.gene50193.t1
chr5.2 exon 60489470 60489527 60489470 ID=MS.gene50193.t1.exon2;Parent=MS.gene50193.t1
chr5.2 CDS 60489470 60489527 60489470 ID=cds.MS.gene50193.t1;Parent=MS.gene50193.t1
chr5.2 exon 60489631 60489670 60489631 ID=MS.gene50193.t1.exon3;Parent=MS.gene50193.t1
chr5.2 CDS 60489631 60489670 60489631 ID=cds.MS.gene50193.t1;Parent=MS.gene50193.t1
chr5.2 exon 60489790 60489902 60489790 ID=MS.gene50193.t1.exon4;Parent=MS.gene50193.t1
chr5.2 CDS 60489790 60489902 60489790 ID=cds.MS.gene50193.t1;Parent=MS.gene50193.t1
chr5.2 exon 60490043 60490131 60490043 ID=MS.gene50193.t1.exon5;Parent=MS.gene50193.t1
chr5.2 CDS 60490043 60490131 60490043 ID=cds.MS.gene50193.t1;Parent=MS.gene50193.t1
chr5.2 exon 60490219 60490294 60490219 ID=MS.gene50193.t1.exon6;Parent=MS.gene50193.t1
chr5.2 CDS 60490219 60490294 60490219 ID=cds.MS.gene50193.t1;Parent=MS.gene50193.t1
chr5.2 exon 60491420 60491481 60491420 ID=MS.gene50193.t1.exon7;Parent=MS.gene50193.t1
chr5.2 CDS 60491420 60491481 60491420 ID=cds.MS.gene50193.t1;Parent=MS.gene50193.t1
chr5.2 exon 60492007 60492010 60492007 ID=MS.gene50193.t1.exon8;Parent=MS.gene50193.t1
chr5.2 CDS 60492007 60492010 60492007 ID=cds.MS.gene50193.t1;Parent=MS.gene50193.t1
Gene Sequence

>MS.gene50193

ATGGGTGAGAGAACAACTTGCAGCAGCACTAGCCATCAAGAACTGAGGGAAGAGTGACCATAAAAATTGTTCATCTTCAAAATTGAATGAACTGAAGGTGCTTTCTTCGTTTTCATGTAAGATTCGGTGCTAAAAATTGTTCGAATCGGTGCTAACTGTTCACGAATTTGTTCGGTTGAAGATTGATTTAATTCTGACGAGTTTCATTTTTTTTCTTTACGTTTTTTTAGCTTCGGTAAAGTTCGAGTCGGTGATAAATGTTTACGTTATGAATTTGTTCCGTTGAAGTTCGATTTGATTATGATGATTTTTGTTTTGTGATTTTTAGGTCTGAATTCAGAGAGAGGTTTAAGATAGAGAATCCAAGCAACAAATCCGTTGTTGTGGTGAGTTTTGTGAAGCGATATAGTTTTACCGTTGAATTTGATTTTTAGGAAATTTTGAATGTTATTGAGTTTTCTAACGTGATTTACGGTGAATTTGAATTAGGTTGGGAAAGCTGGTAGAAAGAAATGGAATGGATATAAAGGTTGAATTAGGTTAGGATGTTGTGATAATTTCACCTCTGTTTCACTGAATAAAATTAATATAAATCTTAATTCGTGTTTTGATTTTAAATTCATTTTTGTGATTTATGTGTATTTTAAGATAAGGCTCCATTCATTGCTAAGGCTGAGAAGTTGAAGGAGGAGTATGAGAAGACAATGCGTGCTTACATACAATATGGGAATTGTAATTACTTCTATAACTTTTCTGTTACTGTGAATTTTTACTGCTCTTATTTTACTTGGATTTATATTAACTTTTTACTGATTTGATCTAATTTTGATGTCATAGACTGAGAAGAATGCTTCGGAGGAAGAAGGATCTAATAAGTTTAAGTCTGAATTTGATGTCTTAGACTGAGAAGAATGCTTCAGAGTTGAAGAAAATTATGGCTAATGAGAAAGTTTCTGAGATTGTTATGGCTGATCTGAAGCGGGCCAAGAGGTGCTGTAATTGAATTATTCAACGTTTTAGTTAGTAATGTCAATATGGATGGTTAATTTGACTTGGATATTTTTTGGGTTATTTCAGGATTTTGGCTAACAGACAATCTGCTGCGCGTTCCAATGAGCACAAGATGCGATACATTTCGGAGCTAGAACACAAGGTTCAGCCACTACACTTTCTGCACAATTTACTTTGTTGCAGGTGGGAACATTTATTTATGTTTGTGAAACCGTGTTTTAGTTTGGTAATTTGAGCTTAGTTTCTTTTTTTACTAAGCCTTCAATTGATATTGTGGTGTGTTTTGTAAAATTGTGGTGGAAATCCACGCTGACGTGAAAGCTACTTATTGTAGGTTCTTTGTTTCCACAATGATAATGTTTTCGGACTACCCAAAATAGTAAGTTGAAGTTAACACAGATGCAGGATCAAACATGCGCTAATTTTATTCCTTTCATTTTAACCTACTTTTGTATTTAGATAACATGAGCAATGGAGTAAACTCAATATGGAGTGCAGAATTGATACTTGGTTTAACTTCAAGTAGTTTTTGTGAGTCCAGTTTGTGTGGTAATTTCATTTAAGTTTATGTGTTGTTCTGGTATGGTACTGAGTTGGTGAAATCATGTTGCTATACAATATATTTGGTTTTTTACACAAAAGATTATGACACTAATTTCTTTATGGTGTTTATGATCCAATAATTTGAAGAATCTCATCTCATTGGAATTGATATATATGTCGCTGAAGCTAATGAGTTCTACCATTCTTTAACAATAAATTCAATATACAATAGATTTTATGAAATTGATCCTTATTGATTTAAAAAGAAAAGGAAATTTATTACTTTTTTTAGGTTTAACAAAGATGCTTATGAAATTTCTTCAATTTGTTTGTTCATTGATCTGTTTGTTTGCTTAGTTCAGGGTATGTTCACTCCTCCACCCATACAAACTCTATTATGATTTTCCATATCCTACTTCACATGCCTTCTTTCCTAGATCAATAGTAGTGTCATACAGTTCTATTCTATAGTTTGACATGAGCATCTTATATTATATATAATTGTTATTAACTTTCTGATAGAATGGTGTTTTGTGTTTAGAGTTGATGTTGTCCTTAGTATCAACACACTCAAACTTTAGTGATAAGAATGTGAGGAATGAGTAAAATGTAGCTACTGCTTAAATTTATGATAGATTAATGGAGATAAGTTAAGTAGGTTTTAACTACAAAATTGGTGCTAATCTTGCTTTTAGTGTACAAGATAAGTATGTACATTCTGCAGATAAGGATGAATCGAATAATGAGAAAGACTACTCATCTACAAGCAATTGTTGACATTAAAAGGTAAAACTGAACCTTATTTGTTACCTTAGTCCAATATTATTAATTGTAACCCGTCTCTTAATATTGATATTTATTCGTTTATAGAATTTTTAACAAGAGTCATATGGCTTCATACCTAATAAGAAGAATGAATTTTTAAATTCTCACTTCATCGAAGATTTTGGTCATAAAAGACAAACACACTGCAATGAAGCCAAGTATTTTAGTTCTTAATCTTAGTGTATACAGACTTCATCACCGCATCATGTCATGTCTGATATGCATATATATTTTGATTACATGATCCTTTTTTCTTTAATGCTCTTCATGTCTAGCATGCATGAACTTTTATTCTTAAAATGTTCAATCACTAAAATGTTCCTACTTAAAATGGTCAATCACTAAAATGCATGAACCTTTTTTCCTTAATGCTCTTTATGTCTAGCCATTGTTATTTTCATATACAATTGCTCATGTTTGTAAGAAAGATACAAGTTATTTACTTACTGCCTCCTCTTGCTTTTGCATTTAAAATTTTTTGTTCAGGTGA
Protein sequence

>MS.gene50193.t1

MGERTTCSSTSHQELREESEFRERFKIENPSNKSVVVVGKAGRKKWNGYKDKAPFIAKAEKLKEEYEKTMRAYIQYGNCNYFYNFSVTTEKNASELKKIMANEKVSEIVMADLKRAKRILANRQSAARSNEHKMRYISELEHKIRMNRIMRKTTHLQAIVDIKR