Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50397.t1 | KEH26852.1 | 81.5 | 81 | 15 | 0 | 171 | 251 | 64 | 144 | 2.70E-30 | 142.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50397.t1 | A0A072UB72 | 81.5 | 81 | 15 | 0 | 171 | 251 | 64 | 144 | 2.0e-30 | 142.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene50397.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50397.t1 | MTR_6g477950 | 77.273 | 88 | 19 | 1 | 171 | 257 | 64 | 151 | 1.66e-41 | 144 |
| MS.gene50397.t1 | MTR_5g071410 | 33.977 | 259 | 156 | 4 | 1 | 253 | 22 | 271 | 8.73e-33 | 120 |
| MS.gene50397.t1 | MTR_7g117585 | 44.762 | 105 | 57 | 1 | 150 | 253 | 44 | 148 | 5.53e-22 | 89.4 |
| MS.gene50397.t1 | MTR_8g069780 | 48.750 | 80 | 41 | 0 | 172 | 251 | 76 | 155 | 2.44e-18 | 79.7 |
| MS.gene50397.t1 | MTR_3g117130 | 48.750 | 80 | 41 | 0 | 172 | 251 | 199 | 278 | 1.06e-16 | 78.2 |
| MS.gene50397.t1 | MTR_0131s0030 | 34.615 | 130 | 77 | 3 | 113 | 242 | 28 | 149 | 5.86e-15 | 70.9 |
| MS.gene50397.t1 | MTR_2g437520 | 46.988 | 83 | 41 | 1 | 172 | 251 | 121 | 203 | 1.35e-14 | 70.9 |
| MS.gene50397.t1 | MTR_2g012700 | 28.448 | 116 | 79 | 2 | 139 | 252 | 7 | 120 | 1.95e-13 | 65.9 |
| MS.gene50397.t1 | MTR_2g062330 | 33.333 | 102 | 65 | 2 | 150 | 251 | 40 | 138 | 3.31e-13 | 65.9 |
| MS.gene50397.t1 | MTR_6g018740 | 48.276 | 58 | 30 | 0 | 172 | 229 | 52 | 109 | 3.75e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 58 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGATAAGTTTGAATTAA+AGG | 0.118029 | 4.4:+79134997 | MS.gene50397:CDS |
| ACCAACGTCATCCACTTTCT+TGG | 0.252631 | 4.4:-79135681 | None:intergenic |
| TGTTTGTTCATGTGGTTCAT+AGG | 0.275003 | 4.4:+79135865 | MS.gene50397:CDS |
| CAAACTCATCTCTACCTAAC+TGG | 0.330629 | 4.4:-79134946 | None:intergenic |
| TAAGATTGACATACCTCGTC+TGG | 0.345367 | 4.4:-79134626 | None:intergenic |
| GTTTGTTCATGTGGTTCATA+GGG | 0.378998 | 4.4:+79135866 | MS.gene50397:CDS |
| CACTTTGTGTTCAAAGTGAT+AGG | 0.388587 | 4.4:-79135275 | None:intergenic |
| TCCGTTCAGCGGTGTTGAGC+TGG | 0.392349 | 4.4:-79135734 | None:intergenic |
| AGTAGAAAACAATGTGGAAT+TGG | 0.392437 | 4.4:+79135099 | MS.gene50397:CDS |
| AGAGGTTGTTGACAACAAAA+AGG | 0.410832 | 4.4:+79135156 | MS.gene50397:CDS |
| AGAGGGATAGTTATCCAGTT+AGG | 0.432165 | 4.4:+79134932 | MS.gene50397:CDS |
| AGGATGGTCAAAATTTGTTA+AGG | 0.437420 | 4.4:+79135782 | MS.gene50397:CDS |
| AGATGTTATTGATATAAGTT+CGG | 0.453836 | 4.4:+79135186 | MS.gene50397:CDS |
| GCTATGTCTAAGCGTGTTCT+CGG | 0.457464 | 4.4:+79135304 | MS.gene50397:CDS |
| CAGTTAGGTAGAGATGAGTT+TGG | 0.459071 | 4.4:+79134947 | MS.gene50397:CDS |
| GATTTCTTCATAAGAAATCA+AGG | 0.490357 | 4.4:+79134863 | MS.gene50397:CDS |
| GGTTGACATGGATACTGATA+AGG | 0.495581 | 4.4:+79135701 | MS.gene50397:CDS |
| AAATCAAGATGTCGAAGAAG+AGG | 0.514225 | 4.4:+79135246 | MS.gene50397:CDS |
| ACCTCTCTAGACACACAGTT+GGG | 0.515669 | 4.4:-79135648 | None:intergenic |
| TCTTCATAAGAAATCAAGGC+AGG | 0.519683 | 4.4:+79134867 | MS.gene50397:CDS |
| TTCATCTTTGTTCCGTTCAG+CGG | 0.520880 | 4.4:-79135745 | None:intergenic |
| TTCAAACTTATCAGCAATTG+CGG | 0.521252 | 4.4:-79134990 | None:intergenic |
| TTAACAAGCCTGGATATGCT+AGG | 0.521703 | 4.4:+79134897 | MS.gene50397:CDS |
| ATAGGGGTAACATTGCTTGA+GGG | 0.527322 | 4.4:+79135883 | MS.gene50397:CDS |
| CTCGCGAAATTTGAATATCT+CGG | 0.529020 | 4.4:+79135028 | MS.gene50397:CDS |
| CTCTTGTACGACATGTGCAT+TGG | 0.540397 | 4.4:-79135137 | None:intergenic |
| TCACCATCCCTAGCATATCC+AGG | 0.541689 | 4.4:-79134905 | None:intergenic |
| TGATATAAGTTCGGATGAAG+AGG | 0.542008 | 4.4:+79135195 | MS.gene50397:CDS |
| CAATGTGGAATTGGTCCCAC+AGG | 0.543202 | 4.4:+79135108 | MS.gene50397:CDS |
| AGGCTTCAAATTAACAAGCC+TGG | 0.546240 | 4.4:+79134887 | MS.gene50397:CDS |
| GTGGATGACGTTGGTTGACA+TGG | 0.551372 | 4.4:+79135689 | MS.gene50397:CDS |
| TAAGGATCGCCGCTTAAAAG+AGG | 0.551825 | 4.4:+79135800 | MS.gene50397:CDS |
| TCTATTCTGATCAGCCAAGA+AGG | 0.552897 | 4.4:-79135074 | None:intergenic |
| TAGGAGAGGATACAAGTGGA+TGG | 0.555529 | 4.4:+79134839 | MS.gene50397:intron |
| ACATGAACAAACAAAACTCT+AGG | 0.556379 | 4.4:-79135855 | None:intergenic |
| ACTTTGTGTTCAAAGTGATA+GGG | 0.559481 | 4.4:-79135274 | None:intergenic |
| GCGTGTTCTCGGACAACCAA+TGG | 0.563243 | 4.4:+79135315 | MS.gene50397:CDS |
| CATAGGGGTAACATTGCTTG+AGG | 0.567582 | 4.4:+79135882 | MS.gene50397:CDS |
| TCCCAACTGTGTGTCTAGAG+AGG | 0.572226 | 4.4:+79135647 | MS.gene50397:CDS |
| CTAGGGATGGTGATTGCAGA+GGG | 0.580162 | 4.4:+79134915 | MS.gene50397:CDS |
| TAACAAGCCTGGATATGCTA+GGG | 0.582056 | 4.4:+79134898 | MS.gene50397:CDS |
| AAGATTGACATACCTCGTCT+GGG | 0.584454 | 4.4:-79134625 | None:intergenic |
| AACCTCTCTAGACACACAGT+TGG | 0.586186 | 4.4:-79135649 | None:intergenic |
| TATTCAAATTTCGCGAGAGT+AGG | 0.600261 | 4.4:-79135022 | None:intergenic |
| CAATGCACATGTCGTACAAG+AGG | 0.602899 | 4.4:+79135138 | MS.gene50397:CDS |
| GCCAGCTCAACACCGCTGAA+CGG | 0.609154 | 4.4:+79135733 | MS.gene50397:CDS |
| TTTGTTCATGTGGTTCATAG+GGG | 0.613718 | 4.4:+79135867 | MS.gene50397:CDS |
| TGTGCATTGGCAGCAACCTG+TGG | 0.615952 | 4.4:-79135124 | None:intergenic |
| AAGGATCGCCGCTTAAAAGA+GGG | 0.619565 | 4.4:+79135801 | MS.gene50397:CDS |
| TATAAGTTCGGATGAAGAGG+TGG | 0.631039 | 4.4:+79135198 | MS.gene50397:CDS |
| AAGCCTGGATATGCTAGGGA+TGG | 0.631545 | 4.4:+79134902 | MS.gene50397:CDS |
| TGAACAAACAAAACTCTAGG+AGG | 0.641689 | 4.4:-79135852 | None:intergenic |
| GCTAGGGATGGTGATTGCAG+AGG | 0.652278 | 4.4:+79134914 | MS.gene50397:CDS |
| TCCAAGAAAGTGGATGACGT+TGG | 0.665396 | 4.4:+79135680 | MS.gene50397:CDS |
| AACCATGGTGAACCCAGACG+AGG | 0.693320 | 4.4:+79134613 | None:intergenic |
| GTGCATTGGCAGCAACCTGT+GGG | 0.698395 | 4.4:-79135123 | None:intergenic |
| TAGACAAGTAGAAAACAATG+TGG | 0.704557 | 4.4:+79135093 | MS.gene50397:CDS |
| TACCTCGTCTGGGTTCACCA+TGG | 0.713572 | 4.4:-79134615 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATGTTAATGATAAA+GGG | - | chr4.4:79135364-79135383 | None:intergenic | 10.0% |
| !! | CATATGAAATTAATTAAAAT+AGG | + | chr4.4:79135423-79135442 | MS.gene50397:intron | 10.0% |
| !!! | GTATATTTTTCAAAATAAAT+CGG | - | chr4.4:79135463-79135482 | None:intergenic | 10.0% |
| !! | CATATAAATGTTAATGATAA+AGG | - | chr4.4:79135365-79135384 | None:intergenic | 15.0% |
| !! | CTTTATCATTAACATTTATA+TGG | + | chr4.4:79135363-79135382 | MS.gene50397:intron | 15.0% |
| !! | TTATTTAAATAACTAACCAT+TGG | - | chr4.4:79135334-79135353 | None:intergenic | 15.0% |
| !!! | TTATTTTGAAAAATATACTC+TGG | + | chr4.4:79135465-79135484 | MS.gene50397:intron | 15.0% |
| !! | ACACTAAAATTATAATACTC+AGG | - | chr4.4:79134806-79134825 | None:intergenic | 20.0% |
| !! | AGATGTTATTGATATAAGTT+CGG | + | chr4.4:79135186-79135205 | MS.gene50397:CDS | 20.0% |
| !! | CATTACTCTTTATATTTGTA+TGG | + | chr4.4:79135397-79135416 | MS.gene50397:intron | 20.0% |
| !!! | TAGTGTTTTTGTTCATTTTT+AGG | + | chr4.4:79134820-79134839 | MS.gene50397:intron | 20.0% |
| !!! | TTTTGTATGGTTATTTGTTT+GGG | + | chr4.4:79134737-79134756 | MS.gene50397:intron | 20.0% |
| ! | AAAGCAACAAACAACTAAAA+AGG | - | chr4.4:79135543-79135562 | None:intergenic | 25.0% |
| ! | AACAAAGATGAAAAAGCTTT+GGG | + | chr4.4:79135756-79135775 | MS.gene50397:CDS | 25.0% |
| ! | GATTTCTTCATAAGAAATCA+AGG | + | chr4.4:79134863-79134882 | MS.gene50397:CDS | 25.0% |
| ! | GTAACTAAAAACATGTTCAA+TGG | - | chr4.4:79135055-79135074 | None:intergenic | 25.0% |
| ! | TGCTGATAAGTTTGAATTAA+AGG | + | chr4.4:79134997-79135016 | MS.gene50397:CDS | 25.0% |
| ! | TTTCAAAATAAATCGGATGT+GGG | - | chr4.4:79135456-79135475 | None:intergenic | 25.0% |
| ! | TTTGAAAAATATACTCTGGA+AGG | + | chr4.4:79135469-79135488 | MS.gene50397:intron | 25.0% |
| !! | GTAACTATATTTTCGTCTAT+AGG | - | chr4.4:79135518-79135537 | None:intergenic | 25.0% |
| !! | GTTTTGTATGGTTATTTGTT+TGG | + | chr4.4:79134736-79134755 | MS.gene50397:intron | 25.0% |
| !! | TTGATTTTGCTCTTCATTAT+CGG | - | chr4.4:79135233-79135252 | None:intergenic | 25.0% |
| !! | TTTTCAAAATAAATCGGATG+TGG | - | chr4.4:79135457-79135476 | None:intergenic | 25.0% |
| !!! | TGACAAGCTAATTTTTGATT+TGG | + | chr4.4:79135824-79135843 | MS.gene50397:CDS | 25.0% |
| !!! | TTTGGTTTTTTCATGAAGAA+CGG | + | chr4.4:79134965-79134984 | MS.gene50397:CDS | 25.0% |
| !!! | TTTTAAAACTTCCAAGAAAG+TGG | + | chr4.4:79135670-79135689 | MS.gene50397:CDS | 25.0% |
| !!! | TTTTTGTTCATTTTTAGGAG+AGG | + | chr4.4:79134825-79134844 | MS.gene50397:intron | 25.0% |
| ACATGAACAAACAAAACTCT+AGG | - | chr4.4:79135858-79135877 | None:intergenic | 30.0% | |
| ACTTTGTGTTCAAAGTGATA+GGG | - | chr4.4:79135277-79135296 | None:intergenic | 30.0% | |
| AGTAGAAAACAATGTGGAAT+TGG | + | chr4.4:79135099-79135118 | MS.gene50397:CDS | 30.0% | |
| GAACAAAGATGAAAAAGCTT+TGG | + | chr4.4:79135755-79135774 | MS.gene50397:CDS | 30.0% | |
| TAGACAAGTAGAAAACAATG+TGG | + | chr4.4:79135093-79135112 | MS.gene50397:CDS | 30.0% | |
| TTCAAAATAAATCGGATGTG+GGG | - | chr4.4:79135455-79135474 | None:intergenic | 30.0% | |
| TTCAAACTTATCAGCAATTG+CGG | - | chr4.4:79134993-79135012 | None:intergenic | 30.0% | |
| TTTCTTATACATCGTGTCTA+TGG | + | chr4.4:79135560-79135579 | MS.gene50397:intron | 30.0% | |
| ! | AACCATACAAAACTTGTTTG+CGG | - | chr4.4:79134729-79134748 | None:intergenic | 30.0% |
| ! | CGTCTATAGGTACTTAATTT+TGG | - | chr4.4:79135505-79135524 | None:intergenic | 30.0% |
| !! | AGGATGGTCAAAATTTGTTA+AGG | + | chr4.4:79135782-79135801 | MS.gene50397:CDS | 30.0% |
| !!! | CATGTTTTTAGTTACCTTCT+TGG | + | chr4.4:79135060-79135079 | MS.gene50397:CDS | 30.0% |
| !!! | TAGAGTTTTGTTTGTTCATG+TGG | + | chr4.4:79135857-79135876 | MS.gene50397:CDS | 30.0% |
| AAACAAACCACAGTAACCTT+CGG | - | chr4.4:79134668-79134687 | None:intergenic | 35.0% | |
| AAATCAAGATGTCGAAGAAG+AGG | + | chr4.4:79135246-79135265 | MS.gene50397:CDS | 35.0% | |
| AGAGGTTGTTGACAACAAAA+AGG | + | chr4.4:79135156-79135175 | MS.gene50397:CDS | 35.0% | |
| ATTGAATGAAACTCTTCCGA+AGG | + | chr4.4:79134649-79134668 | MS.gene50397:intron | 35.0% | |
| CACTTTGTGTTCAAAGTGAT+AGG | - | chr4.4:79135278-79135297 | None:intergenic | 35.0% | |
| CTCGCGAAATTTGAATATCT+CGG | + | chr4.4:79135028-79135047 | MS.gene50397:CDS | 35.0% | |
| GGTATATGTGTTTCGTGTTT+AGG | + | chr4.4:79134758-79134777 | MS.gene50397:intron | 35.0% | |
| GTTTGTTCATGTGGTTCATA+GGG | + | chr4.4:79135866-79135885 | MS.gene50397:CDS | 35.0% | |
| TATTCAAATTTCGCGAGAGT+AGG | - | chr4.4:79135025-79135044 | None:intergenic | 35.0% | |
| TCTTCATAAGAAATCAAGGC+AGG | + | chr4.4:79134867-79134886 | MS.gene50397:CDS | 35.0% | |
| TGAACAAACAAAACTCTAGG+AGG | - | chr4.4:79135855-79135874 | None:intergenic | 35.0% | |
| TGATATAAGTTCGGATGAAG+AGG | + | chr4.4:79135195-79135214 | MS.gene50397:CDS | 35.0% | |
| TGTTTGTTCATGTGGTTCAT+AGG | + | chr4.4:79135865-79135884 | MS.gene50397:CDS | 35.0% | |
| TTTGTTCATGTGGTTCATAG+GGG | + | chr4.4:79135867-79135886 | MS.gene50397:CDS | 35.0% | |
| !! | TACCGCAAACAAGTTTTGTA+TGG | + | chr4.4:79134724-79134743 | MS.gene50397:intron | 35.0% |
| !! | TTTTTAGGAGAGGATACAAG+TGG | + | chr4.4:79134835-79134854 | MS.gene50397:intron | 35.0% |
| AAGATTGACATACCTCGTCT+GGG | - | chr4.4:79134628-79134647 | None:intergenic | 40.0% | |
| AGAGGGATAGTTATCCAGTT+AGG | + | chr4.4:79134932-79134951 | MS.gene50397:CDS | 40.0% | |
| AGGCTTCAAATTAACAAGCC+TGG | + | chr4.4:79134887-79134906 | MS.gene50397:CDS | 40.0% | |
| CAAACTCATCTCTACCTAAC+TGG | - | chr4.4:79134949-79134968 | None:intergenic | 40.0% | |
| CAGTTAGGTAGAGATGAGTT+TGG | + | chr4.4:79134947-79134966 | MS.gene50397:CDS | 40.0% | |
| GGTTGACATGGATACTGATA+AGG | + | chr4.4:79135701-79135720 | MS.gene50397:CDS | 40.0% | |
| GGTTGTTGACAACAAAAAGG+TGG | + | chr4.4:79135159-79135178 | MS.gene50397:CDS | 40.0% | |
| TAACAAGCCTGGATATGCTA+GGG | + | chr4.4:79134898-79134917 | MS.gene50397:CDS | 40.0% | |
| TAAGATTGACATACCTCGTC+TGG | - | chr4.4:79134629-79134648 | None:intergenic | 40.0% | |
| TATAAGTTCGGATGAAGAGG+TGG | + | chr4.4:79135198-79135217 | MS.gene50397:CDS | 40.0% | |
| TCTATTCTGATCAGCCAAGA+AGG | - | chr4.4:79135077-79135096 | None:intergenic | 40.0% | |
| TTAACAAGCCTGGATATGCT+AGG | + | chr4.4:79134897-79134916 | MS.gene50397:CDS | 40.0% | |
| TTCATCTTTGTTCCGTTCAG+CGG | - | chr4.4:79135748-79135767 | None:intergenic | 40.0% | |
| !! | AAAAAGCTTTGGGAAGAGGA+TGG | + | chr4.4:79135766-79135785 | MS.gene50397:CDS | 40.0% |
| !! | GATGAAAAAGCTTTGGGAAG+AGG | + | chr4.4:79135762-79135781 | MS.gene50397:CDS | 40.0% |
| AACCTCTCTAGACACACAGT+TGG | - | chr4.4:79135652-79135671 | None:intergenic | 45.0% | |
| AACTCTTCCGAAGGTTACTG+TGG | + | chr4.4:79134658-79134677 | MS.gene50397:intron | 45.0% | |
| AAGGATCGCCGCTTAAAAGA+GGG | + | chr4.4:79135801-79135820 | MS.gene50397:CDS | 45.0% | |
| ACCAACGTCATCCACTTTCT+TGG | - | chr4.4:79135684-79135703 | None:intergenic | 45.0% | |
| ACCTCTCTAGACACACAGTT+GGG | - | chr4.4:79135651-79135670 | None:intergenic | 45.0% | |
| CAATGCACATGTCGTACAAG+AGG | + | chr4.4:79135138-79135157 | MS.gene50397:CDS | 45.0% | |
| CTCTTGTACGACATGTGCAT+TGG | - | chr4.4:79135140-79135159 | None:intergenic | 45.0% | |
| GCTATGTCTAAGCGTGTTCT+CGG | + | chr4.4:79135304-79135323 | MS.gene50397:CDS | 45.0% | |
| TAAGGATCGCCGCTTAAAAG+AGG | + | chr4.4:79135800-79135819 | MS.gene50397:CDS | 45.0% | |
| TAGGAGAGGATACAAGTGGA+TGG | + | chr4.4:79134839-79134858 | MS.gene50397:intron | 45.0% | |
| TCCAAGAAAGTGGATGACGT+TGG | + | chr4.4:79135680-79135699 | MS.gene50397:CDS | 45.0% | |
| ! | GCTTGTCACCCTCTTTTAAG+CGG | - | chr4.4:79135812-79135831 | None:intergenic | 45.0% |
| AAGCCTGGATATGCTAGGGA+TGG | + | chr4.4:79134902-79134921 | MS.gene50397:CDS | 50.0% | |
| CAATGTGGAATTGGTCCCAC+AGG | + | chr4.4:79135108-79135127 | MS.gene50397:CDS | 50.0% | |
| CTAGGGATGGTGATTGCAGA+GGG | + | chr4.4:79134915-79134934 | MS.gene50397:CDS | 50.0% | |
| TCACCATCCCTAGCATATCC+AGG | - | chr4.4:79134908-79134927 | None:intergenic | 50.0% | |
| TCCCAACTGTGTGTCTAGAG+AGG | + | chr4.4:79135647-79135666 | MS.gene50397:CDS | 50.0% | |
| ! | GTGGATGACGTTGGTTGACA+TGG | + | chr4.4:79135689-79135708 | MS.gene50397:CDS | 50.0% |
| GCGTGTTCTCGGACAACCAA+TGG | + | chr4.4:79135315-79135334 | MS.gene50397:CDS | 55.0% | |
| GCTAGGGATGGTGATTGCAG+AGG | + | chr4.4:79134914-79134933 | MS.gene50397:CDS | 55.0% | |
| ! | GTGCATTGGCAGCAACCTGT+GGG | - | chr4.4:79135126-79135145 | None:intergenic | 55.0% |
| ! | TGTGCATTGGCAGCAACCTG+TGG | - | chr4.4:79135127-79135146 | None:intergenic | 55.0% |
| GCCAGCTCAACACCGCTGAA+CGG | + | chr4.4:79135733-79135752 | MS.gene50397:CDS | 60.0% | |
| ! | TCCGTTCAGCGGTGTTGAGC+TGG | - | chr4.4:79135737-79135756 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 79134617 | 79135902 | 79134617 | ID=MS.gene50397 |
| chr4.4 | mRNA | 79134617 | 79135902 | 79134617 | ID=MS.gene50397.t1;Parent=MS.gene50397 |
| chr4.4 | exon | 79134617 | 79134634 | 79134617 | ID=MS.gene50397.t1.exon1;Parent=MS.gene50397.t1 |
| chr4.4 | CDS | 79134617 | 79134634 | 79134617 | ID=cds.MS.gene50397.t1;Parent=MS.gene50397.t1 |
| chr4.4 | exon | 79134842 | 79135336 | 79134842 | ID=MS.gene50397.t1.exon2;Parent=MS.gene50397.t1 |
| chr4.4 | CDS | 79134842 | 79135336 | 79134842 | ID=cds.MS.gene50397.t1;Parent=MS.gene50397.t1 |
| chr4.4 | exon | 79135642 | 79135902 | 79135642 | ID=MS.gene50397.t1.exon3;Parent=MS.gene50397.t1 |
| chr4.4 | CDS | 79135642 | 79135902 | 79135642 | ID=cds.MS.gene50397.t1;Parent=MS.gene50397.t1 |
| Gene Sequence |
| Protein sequence |
