Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50432.t1 | RHN59122.1 | 84.1 | 314 | 47 | 2 | 1 | 313 | 1 | 312 | 7.80E-143 | 516.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50432.t1 | Q5N6V8 | 34.9 | 307 | 170 | 6 | 6 | 283 | 2 | 307 | 4.3e-41 | 170.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50432.t1 | A0A396I0H3 | 84.1 | 314 | 47 | 2 | 1 | 313 | 1 | 312 | 5.6e-143 | 516.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene50432.t1 | TF | GARP-ARR-B |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50432.t1 | MTR_4g021760 | 83.439 | 314 | 49 | 2 | 1 | 313 | 1 | 312 | 0.0 | 540 |
MS.gene50432.t1 | MTR_4g021855 | 66.447 | 304 | 90 | 5 | 1 | 295 | 1 | 301 | 8.27e-137 | 392 |
MS.gene50432.t1 | MTR_4g021845 | 84.932 | 219 | 31 | 1 | 1 | 219 | 1 | 217 | 7.70e-135 | 384 |
MS.gene50432.t1 | MTR_4g021790 | 75.207 | 242 | 58 | 1 | 1 | 242 | 1 | 240 | 5.47e-127 | 366 |
MS.gene50432.t1 | MTR_5g055260 | 60.173 | 231 | 63 | 5 | 1 | 231 | 1 | 202 | 4.64e-85 | 259 |
MS.gene50432.t1 | MTR_4g023980 | 78.571 | 140 | 28 | 1 | 55 | 194 | 35 | 172 | 4.07e-73 | 225 |
MS.gene50432.t1 | MTR_6g045327 | 45.098 | 306 | 145 | 9 | 1 | 296 | 1 | 293 | 2.07e-68 | 221 |
MS.gene50432.t1 | MTR_1g032570 | 37.808 | 365 | 160 | 9 | 10 | 309 | 11 | 373 | 2.12e-66 | 221 |
MS.gene50432.t1 | MTR_3g086100 | 39.526 | 253 | 120 | 5 | 10 | 231 | 13 | 263 | 1.53e-54 | 189 |
MS.gene50432.t1 | MTR_8g079940 | 39.313 | 262 | 126 | 6 | 9 | 239 | 24 | 283 | 1.77e-53 | 185 |
MS.gene50432.t1 | MTR_8g105600 | 40.800 | 250 | 126 | 3 | 4 | 233 | 3 | 250 | 2.34e-53 | 186 |
MS.gene50432.t1 | MTR_2g034960 | 38.868 | 265 | 134 | 4 | 10 | 248 | 29 | 291 | 5.92e-53 | 185 |
MS.gene50432.t1 | MTR_4g121020 | 38.491 | 265 | 134 | 4 | 10 | 248 | 31 | 292 | 7.16e-53 | 186 |
MS.gene50432.t1 | MTR_4g121020 | 38.491 | 265 | 134 | 4 | 10 | 248 | 31 | 292 | 7.78e-53 | 186 |
MS.gene50432.t1 | MTR_1g013170 | 38.168 | 262 | 126 | 5 | 7 | 236 | 2 | 259 | 2.09e-48 | 171 |
MS.gene50432.t1 | MTR_8g093040 | 43.220 | 236 | 111 | 6 | 1 | 231 | 1 | 218 | 2.75e-47 | 162 |
MS.gene50432.t1 | MTR_7g117705 | 35.714 | 266 | 143 | 4 | 7 | 244 | 2 | 267 | 3.91e-47 | 167 |
MS.gene50432.t1 | MTR_4g131600 | 35.772 | 246 | 137 | 4 | 10 | 234 | 20 | 265 | 2.33e-46 | 167 |
MS.gene50432.t1 | MTR_3g106220 | 37.247 | 247 | 125 | 3 | 10 | 226 | 8 | 254 | 1.85e-44 | 162 |
MS.gene50432.t1 | MTR_1g013180 | 36.364 | 253 | 135 | 4 | 7 | 233 | 153 | 405 | 1.28e-42 | 158 |
MS.gene50432.t1 | MTR_1g032570 | 33.987 | 306 | 136 | 8 | 68 | 309 | 1 | 304 | 1.03e-41 | 154 |
MS.gene50432.t1 | MTR_4g131570 | 32.661 | 248 | 141 | 4 | 10 | 231 | 17 | 264 | 2.25e-40 | 150 |
MS.gene50432.t1 | MTR_6g016850 | 43.750 | 160 | 86 | 2 | 4 | 161 | 3 | 160 | 3.70e-40 | 140 |
MS.gene50432.t1 | MTR_4g131580 | 32.389 | 247 | 144 | 4 | 10 | 233 | 17 | 263 | 7.38e-40 | 149 |
MS.gene50432.t1 | MTR_2g450070 | 33.725 | 255 | 134 | 4 | 10 | 229 | 18 | 272 | 1.84e-39 | 149 |
MS.gene50432.t1 | MTR_2g450070 | 33.725 | 255 | 134 | 4 | 10 | 229 | 18 | 272 | 2.49e-39 | 149 |
MS.gene50432.t1 | MTR_3g102590 | 37.674 | 215 | 105 | 4 | 10 | 222 | 8 | 195 | 6.64e-39 | 139 |
MS.gene50432.t1 | MTR_3g102600 | 36.607 | 224 | 102 | 4 | 4 | 226 | 4 | 188 | 2.01e-37 | 135 |
MS.gene50432.t1 | MTR_3g102590 | 36.792 | 212 | 105 | 4 | 10 | 219 | 8 | 192 | 1.72e-36 | 131 |
MS.gene50432.t1 | MTR_3g086100 | 38.660 | 194 | 87 | 4 | 68 | 231 | 1 | 192 | 2.88e-36 | 138 |
MS.gene50432.t1 | MTR_3g102600 | 35.160 | 219 | 102 | 4 | 4 | 221 | 4 | 183 | 8.82e-35 | 127 |
MS.gene50432.t1 | MTR_0450s0040 | 29.310 | 232 | 145 | 3 | 12 | 231 | 6 | 230 | 3.16e-30 | 119 |
MS.gene50432.t1 | MTR_3g102600 | 35.838 | 173 | 74 | 2 | 54 | 226 | 4 | 139 | 5.23e-30 | 114 |
MS.gene50432.t1 | MTR_7g026400 | 32.227 | 211 | 122 | 4 | 52 | 248 | 30 | 233 | 4.15e-29 | 119 |
MS.gene50432.t1 | MTR_3g102600 | 33.929 | 168 | 74 | 2 | 54 | 221 | 4 | 134 | 2.23e-27 | 105 |
MS.gene50432.t1 | MTR_4g121020 | 36.022 | 186 | 91 | 3 | 88 | 248 | 6 | 188 | 7.78e-27 | 112 |
MS.gene50432.t1 | MTR_8g032710 | 23.810 | 357 | 212 | 10 | 12 | 309 | 19 | 374 | 1.65e-21 | 96.3 |
MS.gene50432.t1 | MTR_1g013160 | 34.211 | 152 | 67 | 3 | 71 | 193 | 1 | 148 | 1.83e-18 | 82.0 |
MS.gene50432.t1 | MTR_2g090675 | 38.298 | 94 | 55 | 2 | 135 | 226 | 125 | 217 | 4.15e-13 | 70.5 |
MS.gene50432.t1 | MTR_5g041350 | 55.556 | 54 | 23 | 1 | 170 | 222 | 15 | 68 | 4.30e-13 | 70.1 |
MS.gene50432.t1 | MTR_6g032990 | 57.407 | 54 | 22 | 1 | 170 | 222 | 42 | 95 | 8.95e-13 | 69.3 |
MS.gene50432.t1 | MTR_2g086450 | 55.556 | 54 | 23 | 1 | 170 | 222 | 45 | 98 | 3.88e-12 | 67.4 |
MS.gene50432.t1 | MTR_7g089010 | 50.000 | 58 | 29 | 0 | 169 | 226 | 90 | 147 | 5.28e-12 | 66.2 |
MS.gene50432.t1 | MTR_4g081710 | 51.852 | 54 | 25 | 1 | 170 | 222 | 17 | 70 | 6.16e-12 | 66.6 |
MS.gene50432.t1 | MTR_5g014040 | 36.145 | 83 | 53 | 0 | 169 | 251 | 310 | 392 | 6.68e-12 | 67.4 |
MS.gene50432.t1 | MTR_4g078810 | 48.276 | 58 | 30 | 0 | 169 | 226 | 157 | 214 | 1.09e-11 | 66.2 |
MS.gene50432.t1 | MTR_4g064730 | 48.276 | 58 | 30 | 0 | 169 | 226 | 130 | 187 | 1.23e-11 | 65.5 |
MS.gene50432.t1 | MTR_7g088070 | 40.449 | 89 | 50 | 2 | 170 | 257 | 50 | 136 | 3.64e-11 | 63.5 |
MS.gene50432.t1 | MTR_7g115530 | 40.659 | 91 | 51 | 3 | 170 | 258 | 218 | 307 | 4.69e-11 | 63.9 |
MS.gene50432.t1 | MTR_1g080330 | 44.048 | 84 | 44 | 3 | 161 | 242 | 165 | 247 | 6.39e-11 | 63.2 |
MS.gene50432.t1 | MTR_4g098870 | 36.145 | 83 | 53 | 0 | 169 | 251 | 309 | 391 | 6.97e-11 | 63.9 |
MS.gene50432.t1 | MTR_4g098870 | 36.145 | 83 | 53 | 0 | 169 | 251 | 329 | 411 | 8.14e-11 | 63.9 |
MS.gene50432.t1 | MTR_7g115530 | 50.000 | 64 | 30 | 2 | 170 | 231 | 218 | 281 | 8.24e-11 | 63.2 |
MS.gene50432.t1 | MTR_4g098870 | 36.145 | 83 | 53 | 0 | 169 | 251 | 348 | 430 | 8.55e-11 | 63.9 |
MS.gene50432.t1 | MTR_7g115530 | 46.479 | 71 | 34 | 2 | 170 | 236 | 218 | 288 | 8.77e-11 | 63.5 |
MS.gene50432.t1 | MTR_4g098870 | 36.145 | 83 | 53 | 0 | 169 | 251 | 309 | 391 | 8.97e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50432.t1 | AT2G01760 | 38.403 | 263 | 121 | 5 | 7 | 232 | 4 | 262 | 1.27e-53 | 182 |
MS.gene50432.t1 | AT1G67710 | 39.700 | 267 | 125 | 8 | 11 | 243 | 8 | 272 | 1.24e-50 | 177 |
MS.gene50432.t1 | AT3G16857 | 36.364 | 308 | 138 | 11 | 10 | 259 | 33 | 340 | 3.47e-48 | 173 |
MS.gene50432.t1 | AT3G16857 | 35.714 | 308 | 140 | 9 | 10 | 259 | 33 | 340 | 3.96e-48 | 173 |
MS.gene50432.t1 | AT2G01760 | 35.052 | 291 | 120 | 7 | 7 | 232 | 4 | 290 | 9.53e-48 | 167 |
MS.gene50432.t1 | AT4G31920 | 35.622 | 233 | 140 | 2 | 10 | 232 | 13 | 245 | 1.07e-43 | 159 |
MS.gene50432.t1 | AT2G25180 | 38.333 | 240 | 124 | 6 | 10 | 226 | 13 | 251 | 6.25e-42 | 155 |
MS.gene50432.t1 | AT5G58080 | 36.614 | 254 | 127 | 7 | 10 | 236 | 14 | 260 | 3.87e-37 | 142 |
MS.gene50432.t1 | AT3G16857 | 35.316 | 269 | 116 | 11 | 49 | 259 | 2 | 270 | 6.04e-37 | 141 |
MS.gene50432.t1 | AT1G67710 | 39.713 | 209 | 91 | 7 | 68 | 243 | 1 | 207 | 2.23e-33 | 129 |
MS.gene50432.t1 | AT2G01760 | 35.821 | 201 | 89 | 4 | 68 | 232 | 1 | 197 | 2.94e-33 | 126 |
MS.gene50432.t1 | AT3G62670 | 32.599 | 227 | 132 | 6 | 28 | 233 | 53 | 279 | 2.20e-31 | 123 |
MS.gene50432.t1 | AT5G49240 | 30.085 | 236 | 140 | 5 | 9 | 219 | 37 | 272 | 7.81e-31 | 119 |
MS.gene50432.t1 | AT1G49190 | 27.734 | 256 | 154 | 6 | 10 | 234 | 30 | 285 | 1.08e-27 | 113 |
MS.gene50432.t1 | AT1G67710 | 38.095 | 189 | 82 | 7 | 88 | 243 | 12 | 198 | 1.29e-24 | 105 |
MS.gene50432.t1 | AT5G07210 | 27.407 | 270 | 142 | 7 | 14 | 231 | 16 | 283 | 1.71e-23 | 102 |
MS.gene50432.t1 | AT5G07210 | 26.619 | 278 | 142 | 8 | 14 | 231 | 16 | 291 | 4.45e-21 | 95.5 |
MS.gene50432.t1 | AT2G27070 | 25.000 | 264 | 141 | 8 | 14 | 222 | 16 | 277 | 1.36e-17 | 84.7 |
MS.gene50432.t1 | AT1G49190 | 32.258 | 124 | 83 | 1 | 10 | 132 | 30 | 153 | 4.19e-17 | 83.6 |
MS.gene50432.t1 | AT5G29000 | 39.450 | 109 | 57 | 4 | 132 | 238 | 200 | 301 | 3.12e-14 | 73.2 |
MS.gene50432.t1 | AT5G29000 | 37.931 | 116 | 63 | 4 | 132 | 245 | 200 | 308 | 3.43e-14 | 73.9 |
MS.gene50432.t1 | AT5G29000 | 37.931 | 116 | 63 | 4 | 132 | 245 | 157 | 265 | 4.04e-14 | 73.6 |
MS.gene50432.t1 | AT5G29000 | 37.931 | 116 | 63 | 4 | 132 | 245 | 157 | 265 | 4.04e-14 | 73.6 |
MS.gene50432.t1 | AT3G04030 | 57.407 | 54 | 22 | 1 | 170 | 222 | 45 | 98 | 6.05e-13 | 70.1 |
MS.gene50432.t1 | AT3G04030 | 57.407 | 54 | 22 | 1 | 170 | 222 | 45 | 98 | 7.05e-13 | 69.7 |
MS.gene50432.t1 | AT5G59570 | 43.421 | 76 | 40 | 1 | 151 | 226 | 125 | 197 | 7.79e-13 | 68.9 |
MS.gene50432.t1 | AT5G59570 | 43.421 | 76 | 40 | 1 | 151 | 226 | 125 | 197 | 7.79e-13 | 68.9 |
MS.gene50432.t1 | AT3G04030 | 54.717 | 53 | 24 | 0 | 170 | 222 | 45 | 97 | 1.31e-12 | 68.9 |
MS.gene50432.t1 | AT5G18240 | 57.407 | 54 | 22 | 1 | 170 | 222 | 45 | 98 | 1.34e-12 | 68.9 |
MS.gene50432.t1 | AT5G18240 | 57.407 | 54 | 22 | 1 | 170 | 222 | 45 | 98 | 1.34e-12 | 68.9 |
MS.gene50432.t1 | AT5G18240 | 57.407 | 54 | 22 | 1 | 170 | 222 | 45 | 98 | 1.45e-12 | 68.9 |
MS.gene50432.t1 | AT5G18240 | 57.407 | 54 | 22 | 1 | 170 | 222 | 45 | 98 | 1.52e-12 | 68.9 |
MS.gene50432.t1 | AT5G18240 | 57.407 | 54 | 22 | 1 | 170 | 222 | 45 | 98 | 1.52e-12 | 68.9 |
MS.gene50432.t1 | AT3G46640 | 44.444 | 81 | 42 | 2 | 146 | 226 | 123 | 200 | 1.77e-12 | 68.2 |
MS.gene50432.t1 | AT5G44190 | 44.118 | 68 | 38 | 0 | 159 | 226 | 136 | 203 | 1.81e-12 | 68.2 |
MS.gene50432.t1 | AT5G44190 | 48.333 | 60 | 31 | 0 | 167 | 226 | 144 | 203 | 1.87e-12 | 68.6 |
MS.gene50432.t1 | AT3G46640 | 44.444 | 81 | 42 | 2 | 146 | 226 | 123 | 200 | 1.95e-12 | 68.2 |
MS.gene50432.t1 | AT3G46640 | 44.444 | 81 | 42 | 2 | 146 | 226 | 123 | 200 | 1.95e-12 | 68.2 |
MS.gene50432.t1 | AT5G05090 | 43.820 | 89 | 38 | 3 | 138 | 226 | 61 | 137 | 2.34e-12 | 67.0 |
MS.gene50432.t1 | AT2G40970 | 48.276 | 58 | 30 | 0 | 169 | 226 | 104 | 161 | 4.02e-12 | 66.2 |
MS.gene50432.t1 | AT3G10760 | 50.000 | 58 | 29 | 0 | 169 | 226 | 104 | 161 | 4.83e-12 | 67.0 |
MS.gene50432.t1 | AT4G28610 | 45.349 | 86 | 43 | 3 | 170 | 252 | 225 | 309 | 1.29e-11 | 65.9 |
MS.gene50432.t1 | AT3G04450 | 29.870 | 154 | 93 | 6 | 84 | 222 | 138 | 291 | 1.44e-11 | 65.1 |
MS.gene50432.t1 | AT3G24120 | 49.231 | 65 | 32 | 1 | 170 | 233 | 41 | 105 | 3.13e-11 | 63.9 |
MS.gene50432.t1 | AT3G24120 | 49.231 | 65 | 32 | 1 | 170 | 233 | 41 | 105 | 3.39e-11 | 63.9 |
MS.gene50432.t1 | AT1G69580 | 51.852 | 54 | 25 | 1 | 170 | 222 | 34 | 87 | 4.36e-11 | 63.9 |
MS.gene50432.t1 | AT1G69580 | 51.852 | 54 | 25 | 1 | 170 | 222 | 34 | 87 | 4.68e-11 | 63.9 |
MS.gene50432.t1 | AT3G04450 | 46.552 | 58 | 30 | 1 | 166 | 222 | 234 | 291 | 6.49e-11 | 63.9 |
MS.gene50432.t1 | AT2G01060 | 47.692 | 65 | 33 | 1 | 159 | 222 | 4 | 68 | 6.63e-11 | 63.2 |
MS.gene50432.t1 | AT3G04450 | 46.552 | 58 | 30 | 1 | 166 | 222 | 194 | 251 | 7.38e-11 | 63.5 |
MS.gene50432.t1 | AT3G04450 | 46.552 | 58 | 30 | 1 | 166 | 222 | 194 | 251 | 7.38e-11 | 63.5 |
MS.gene50432.t1 | AT2G20570 | 39.506 | 81 | 43 | 1 | 152 | 226 | 129 | 209 | 9.22e-11 | 63.5 |
Find 78 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACATTGTGTCGCAGAATTC+AGG | 0.268438 | 4.4:-79723304 | None:intergenic |
GTTTCTGCTTTGAAGTTTGC+AGG | 0.281524 | 4.4:-79724927 | None:intergenic |
ACATATTGCCAGCCATTTAC+AGG | 0.282271 | 4.4:+79722806 | MS.gene50432:CDS |
TTCAGTTACCAAATGTAGTA+TGG | 0.293347 | 4.4:+79722081 | MS.gene50432:intron |
CAACGACATTGGGTGGAAAT+TGG | 0.345706 | 4.4:+79723344 | MS.gene50432:CDS |
TTCATTCCTTGATTAGTTGC+AGG | 0.351552 | 4.4:-79724969 | None:intergenic |
AGGGATTAGTATGGTTGGTT+TGG | 0.359952 | 4.4:+79725013 | MS.gene50432:CDS |
TGAGTTGTAGGGTAACATTT+TGG | 0.376494 | 4.4:-79722198 | None:intergenic |
TCAAGTTGGAGGGATTAGTA+TGG | 0.378419 | 4.4:+79725004 | MS.gene50432:CDS |
GATAAATCATCATCAACATA+TGG | 0.380393 | 4.4:-79723416 | None:intergenic |
AATGTGGGGCTTGCGAATAT+TGG | 0.385194 | 4.4:+79722394 | MS.gene50432:CDS |
GTCAATCAACTAGGCCTTGA+TGG | 0.391531 | 4.4:+79722639 | MS.gene50432:CDS |
TGACAGGAATGTTGAGTTGT+AGG | 0.408636 | 4.4:-79722210 | None:intergenic |
ATCAGAAGCCATACTACATT+TGG | 0.409595 | 4.4:-79722089 | None:intergenic |
AATAAAGAATATGAAATTGT+TGG | 0.416766 | 4.4:+79722492 | MS.gene50432:CDS |
CTTTCTTTCCAACATGTTGA+AGG | 0.419409 | 4.4:-79722113 | None:intergenic |
CAAAGAAGGCCCGTTTGTCT+TGG | 0.435563 | 4.4:+79722583 | MS.gene50432:CDS |
AAAAGAAACACTTGCAAAGA+AGG | 0.435703 | 4.4:+79722569 | MS.gene50432:CDS |
AATACTAATCTTGTTCAAGT+TGG | 0.438881 | 4.4:+79724990 | MS.gene50432:CDS |
GCAAACTTCAAAGCAGAAAC+AGG | 0.439125 | 4.4:+79724930 | MS.gene50432:CDS |
GGTTCAAGAAAATAGAAAAC+GGG | 0.441425 | 4.4:+79722524 | MS.gene50432:CDS |
TTGCGATGCACAACGACATT+GGG | 0.452490 | 4.4:+79723334 | MS.gene50432:CDS |
TTGAGACCGGCTGGGAATGA+TGG | 0.453544 | 4.4:-79721885 | None:intergenic |
CTTCAACATGTTGGAAAGAA+AGG | 0.459586 | 4.4:+79722114 | MS.gene50432:CDS |
AATAAATTCTTACTAATGAC+AGG | 0.461511 | 4.4:-79722226 | None:intergenic |
ACATCTCCTCAATAGAGTTA+AGG | 0.467190 | 4.4:-79721938 | None:intergenic |
TTCTCGTGACCAAGACAAAC+GGG | 0.467708 | 4.4:-79722592 | None:intergenic |
TCAACATATGGGAACAAGTT+GGG | 0.468173 | 4.4:-79723404 | None:intergenic |
TACTCACTCAATGCCGGAGC+AGG | 0.473606 | 4.4:+79723268 | MS.gene50432:CDS |
GCAATAACCTTGAGACCGGC+TGG | 0.475576 | 4.4:-79721894 | None:intergenic |
AGTATGGTTGGTTTGGCACC+CGG | 0.478569 | 4.4:+79725020 | MS.gene50432:CDS |
ACTAATCTTGTTCAAGTTGG+AGG | 0.483097 | 4.4:+79724993 | MS.gene50432:CDS |
ATAGTCCCTGCAACTAATCA+AGG | 0.487427 | 4.4:+79724963 | MS.gene50432:CDS |
AAAAGTGTTGCTCATAATGT+TGG | 0.490442 | 4.4:-79723372 | None:intergenic |
AAGTCATAAACATCCATGTC+TGG | 0.491105 | 4.4:-79722172 | None:intergenic |
TGGTTCAAGAAAATAGAAAA+CGG | 0.501089 | 4.4:+79722523 | MS.gene50432:CDS |
GTATGGTTGGTTTGGCACCC+GGG | 0.509480 | 4.4:+79725021 | MS.gene50432:CDS |
CTAATCTTGTTCAAGTTGGA+GGG | 0.510172 | 4.4:+79724994 | MS.gene50432:CDS |
ATCACACTTCAATACATGAA+TGG | 0.514722 | 4.4:+79724889 | MS.gene50432:CDS |
TCATTCCTTGATTAGTTGCA+GGG | 0.514860 | 4.4:-79724968 | None:intergenic |
ATATGAAATTGTTGGAAGCT+CGG | 0.515274 | 4.4:+79722500 | MS.gene50432:CDS |
ATTGCGATGCACAACGACAT+TGG | 0.516098 | 4.4:+79723333 | MS.gene50432:CDS |
TGTAATCGATATCATTATCA+AGG | 0.517908 | 4.4:+79721960 | MS.gene50432:CDS |
ATCATGAAATCTATTGAATG+TGG | 0.519581 | 4.4:+79722378 | MS.gene50432:CDS |
GACAGGAATGTTGAGTTGTA+GGG | 0.519779 | 4.4:-79722209 | None:intergenic |
GTTGGAGGGATTAGTATGGT+TGG | 0.520344 | 4.4:+79725008 | MS.gene50432:CDS |
TCATGAAATCTATTGAATGT+GGG | 0.521948 | 4.4:+79722379 | MS.gene50432:CDS |
ATTCTCGTGACCAAGACAAA+CGG | 0.526657 | 4.4:-79722593 | None:intergenic |
AAAATGAACCTGTAAATGGC+TGG | 0.527802 | 4.4:-79722814 | None:intergenic |
TTCTGATGCCTTCAACATGT+TGG | 0.527887 | 4.4:+79722105 | MS.gene50432:CDS |
CATGTTGCAAGAATTAGAAA+CGG | 0.528421 | 4.4:+79722459 | MS.gene50432:CDS |
ACTTCAATACATGAATGGAT+TGG | 0.530450 | 4.4:+79724894 | MS.gene50432:CDS |
AATGCATATTTGAACATCCC+CGG | 0.537794 | 4.4:-79725039 | None:intergenic |
CACTCTCCTTAACTCTATTG+AGG | 0.546467 | 4.4:+79721932 | MS.gene50432:CDS |
CTACGTGCAGTCAATCAACT+AGG | 0.547867 | 4.4:+79722630 | MS.gene50432:CDS |
ATAAATCATCATCAACATAT+GGG | 0.548211 | 4.4:-79723415 | None:intergenic |
AGAAAACTCTGGTCCTGCTC+CGG | 0.548712 | 4.4:-79723281 | None:intergenic |
GGGGATGTTCAAATATGCAT+TGG | 0.551018 | 4.4:+79725041 | MS.gene50432:CDS |
ATCATTCCCAGCCGGTCTCA+AGG | 0.552068 | 4.4:+79721887 | MS.gene50432:CDS |
ATCAACATATGGGAACAAGT+TGG | 0.563419 | 4.4:-79723405 | None:intergenic |
ATGCATATTTGAACATCCCC+GGG | 0.564224 | 4.4:-79725038 | None:intergenic |
TATGGTTGGTTTGGCACCCG+GGG | 0.576901 | 4.4:+79725022 | MS.gene50432:CDS |
CATGAAATCTATTGAATGTG+GGG | 0.577494 | 4.4:+79722380 | MS.gene50432:CDS |
TGAGACCGGCTGGGAATGAT+GGG | 0.577892 | 4.4:-79721884 | None:intergenic |
AGGAAAGAATCATACCATCA+AGG | 0.580027 | 4.4:-79722653 | None:intergenic |
CGATGCACAACGACATTGGG+TGG | 0.580466 | 4.4:+79723337 | MS.gene50432:CDS |
AATTGCAATAACCTTGAGAC+CGG | 0.581075 | 4.4:-79721898 | None:intergenic |
AGAAGCTACTCACTCAATGC+CGG | 0.591913 | 4.4:+79723262 | MS.gene50432:CDS |
CAGAATTCAGGAGAAAACTC+TGG | 0.602905 | 4.4:-79723292 | None:intergenic |
TTTCAGGACAAAATACATAC+GGG | 0.611632 | 4.4:+79724866 | MS.gene50432:intron |
CAATAACCTTGAGACCGGCT+GGG | 0.613963 | 4.4:-79721893 | None:intergenic |
GACAACCCATCATTCCCAGC+CGG | 0.620153 | 4.4:+79721879 | MS.gene50432:CDS |
TGATGCTCATATGCCAGACA+TGG | 0.629107 | 4.4:+79722159 | MS.gene50432:CDS |
CAACAGAAGAGACAGAAGGT+AGG | 0.641230 | 4.4:+79723195 | MS.gene50432:CDS |
AGCTCAACAGAAGAGACAGA+AGG | 0.643732 | 4.4:+79723191 | MS.gene50432:CDS |
TGAAATTGTTGGAAGCTCGG+TGG | 0.670504 | 4.4:+79722503 | MS.gene50432:CDS |
ATGATTTATCATCACTTGTG+TGG | 0.696325 | 4.4:+79723429 | MS.gene50432:CDS |
GTTCAAGAAAATAGAAAACG+GGG | 0.742093 | 4.4:+79722525 | MS.gene50432:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAGAATATGAAATTGT+TGG | + | chr4.4:79722492-79722511 | MS.gene50432:CDS | 15.0% |
!! | CAAATTAATGACAAATTAAA+AGG | - | chr4.4:79723913-79723932 | None:intergenic | 15.0% |
!!! | AATATGTTCTTTTTTCATAT+CGG | - | chr4.4:79722793-79722812 | None:intergenic | 15.0% |
!!! | TCTTTTTATAGTTAATTCTA+AGG | + | chr4.4:79723804-79723823 | MS.gene50432:intron | 15.0% |
!!! | TGATTTTAAACTGAAATTTA+TGG | + | chr4.4:79723106-79723125 | MS.gene50432:intron | 15.0% |
!! | AAAAGATGAAAACTTGAATA+AGG | - | chr4.4:79722003-79722022 | None:intergenic | 20.0% |
!! | AAACATTCAGGAATTTATTT+AGG | + | chr4.4:79724371-79724390 | MS.gene50432:intron | 20.0% |
!! | AATAAATTCTTACTAATGAC+AGG | - | chr4.4:79722229-79722248 | None:intergenic | 20.0% |
!! | AGCATAGTAAAAAAGTAATT+AGG | - | chr4.4:79722676-79722695 | None:intergenic | 20.0% |
!! | ATAAATCATCATCAACATAT+GGG | - | chr4.4:79723418-79723437 | None:intergenic | 20.0% |
!! | CAATATAAGAATAAACAAAC+AGG | - | chr4.4:79722056-79722075 | None:intergenic | 20.0% |
!! | TAAATGTAAAGAATCATCTT+GGG | - | chr4.4:79723523-79723542 | None:intergenic | 20.0% |
!! | TTTCTAAGTAATTGTGATTT+AGG | + | chr4.4:79724559-79724578 | MS.gene50432:intron | 20.0% |
!!! | ATATGTTCTTTTTTCATATC+GGG | - | chr4.4:79722792-79722811 | None:intergenic | 20.0% |
!!! | ATATTTCTTTTTTGTAGTGA+TGG | + | chr4.4:79722332-79722351 | MS.gene50432:intron | 20.0% |
!!! | ATGTTTTTCTCTTAATTTTC+AGG | + | chr4.4:79722729-79722748 | MS.gene50432:intron | 20.0% |
!!! | ATTCAAGTTTTCATCTTTTT+TGG | + | chr4.4:79722004-79722023 | MS.gene50432:intron | 20.0% |
!!! | TGTTTTTCTCTTAATTTTCA+GGG | + | chr4.4:79722730-79722749 | MS.gene50432:intron | 20.0% |
!!! | TTCTCATGAAATTTTTCAAT+TGG | - | chr4.4:79723966-79723985 | None:intergenic | 20.0% |
!!! | TTTTGCAGAAATATAGAAAT+CGG | + | chr4.4:79723162-79723181 | MS.gene50432:intron | 20.0% |
! | AAGTAATTGTGATTTAGGAA+TGG | + | chr4.4:79724564-79724583 | MS.gene50432:intron | 25.0% |
! | AATACTAATCTTGTTCAAGT+TGG | + | chr4.4:79724990-79725009 | MS.gene50432:CDS | 25.0% |
! | AGAATCTCACGAAATATTAA+TGG | + | chr4.4:79724397-79724416 | MS.gene50432:intron | 25.0% |
! | AGAATTTACTTTCTTATGCT+TGG | + | chr4.4:79724139-79724158 | MS.gene50432:intron | 25.0% |
! | ATCATGAAATCTATTGAATG+TGG | + | chr4.4:79722378-79722397 | MS.gene50432:CDS | 25.0% |
! | CTTTCAAAACATAAACATTC+AGG | + | chr4.4:79724359-79724378 | MS.gene50432:intron | 25.0% |
! | GATAAATCATCATCAACATA+TGG | - | chr4.4:79723419-79723438 | None:intergenic | 25.0% |
! | GTAAATGTAAAGAATCATCT+TGG | - | chr4.4:79723524-79723543 | None:intergenic | 25.0% |
! | TACAAAAATGAACCTGTAAA+TGG | - | chr4.4:79722821-79722840 | None:intergenic | 25.0% |
! | TATCAGAAGATAGTTTATTC+CGG | - | chr4.4:79724200-79724219 | None:intergenic | 25.0% |
! | TCATGAAATCTATTGAATGT+GGG | + | chr4.4:79722379-79722398 | MS.gene50432:CDS | 25.0% |
! | TGGTTCAAGAAAATAGAAAA+CGG | + | chr4.4:79722523-79722542 | MS.gene50432:CDS | 25.0% |
! | TGTAATCGATATCATTATCA+AGG | + | chr4.4:79721960-79721979 | MS.gene50432:CDS | 25.0% |
!! | AAAAACGATTCTGAAAATCA+TGG | + | chr4.4:79722761-79722780 | MS.gene50432:CDS | 25.0% |
!! | ATGATTTTCAGAATCGTTTT+TGG | - | chr4.4:79722762-79722781 | None:intergenic | 25.0% |
!! | GTTTTTCTCTTAATTTTCAG+GGG | + | chr4.4:79722731-79722750 | MS.gene50432:intron | 25.0% |
!! | TAATAAATCTTGCTGATTGA+AGG | + | chr4.4:79723651-79723670 | MS.gene50432:intron | 25.0% |
!! | TAGTCATTTATAGTGTTGTT+TGG | + | chr4.4:79724100-79724119 | MS.gene50432:intron | 25.0% |
!! | TGTTTTATGCAGTTACATTA+AGG | - | chr4.4:79723604-79723623 | None:intergenic | 25.0% |
!! | TTGATATTTCTTTTTCTCTG+TGG | + | chr4.4:79724487-79724506 | MS.gene50432:intron | 25.0% |
!! | TTTCATGATAGAACTTTTTG+TGG | - | chr4.4:79722367-79722386 | None:intergenic | 25.0% |
!! | TTTTATCCTGAAACTTTTTG+AGG | + | chr4.4:79724460-79724479 | MS.gene50432:intron | 25.0% |
!!! | AAGTCAAATTTTGTTTCAAG+AGG | - | chr4.4:79723242-79723261 | None:intergenic | 25.0% |
!!! | TTTTCAGGACAAAATACATA+CGG | + | chr4.4:79724865-79724884 | MS.gene50432:intron | 25.0% |
AAAAGAAACACTTGCAAAGA+AGG | + | chr4.4:79722569-79722588 | MS.gene50432:CDS | 30.0% | |
AAAGAAACACACAAAAGATG+AGG | - | chr4.4:79724343-79724362 | None:intergenic | 30.0% | |
AAAGTTCCTCAAAAAGTTTC+AGG | - | chr4.4:79724469-79724488 | None:intergenic | 30.0% | |
AACTGAGAAACTATAGACTT+AGG | - | chr4.4:79722882-79722901 | None:intergenic | 30.0% | |
ACAAAATAATGTGCTGTGAA+TGG | - | chr4.4:79724716-79724735 | None:intergenic | 30.0% | |
ACTTCAATACATGAATGGAT+TGG | + | chr4.4:79724894-79724913 | MS.gene50432:CDS | 30.0% | |
AGATGTTCTTAAAGTGAACT+CGG | + | chr4.4:79723999-79724018 | MS.gene50432:intron | 30.0% | |
AGTAGCATATTATCAACAAG+AGG | - | chr4.4:79723075-79723094 | None:intergenic | 30.0% | |
ATATGAAATTGTTGGAAGCT+CGG | + | chr4.4:79722500-79722519 | MS.gene50432:CDS | 30.0% | |
ATCACACTTCAATACATGAA+TGG | + | chr4.4:79724889-79724908 | MS.gene50432:CDS | 30.0% | |
ATGATTTATCATCACTTGTG+TGG | + | chr4.4:79723429-79723448 | MS.gene50432:CDS | 30.0% | |
CAAAATAATGTGCTGTGAAT+GGG | - | chr4.4:79724715-79724734 | None:intergenic | 30.0% | |
CATGAAATCTATTGAATGTG+GGG | + | chr4.4:79722380-79722399 | MS.gene50432:CDS | 30.0% | |
CATGTTGCAAGAATTAGAAA+CGG | + | chr4.4:79722459-79722478 | MS.gene50432:CDS | 30.0% | |
CCAAAACTTTCTTTCATCTT+AGG | - | chr4.4:79724810-79724829 | None:intergenic | 30.0% | |
GGTTCAAGAAAATAGAAAAC+GGG | + | chr4.4:79722524-79722543 | MS.gene50432:CDS | 30.0% | |
GTTCAAGAAAATAGAAAACG+GGG | + | chr4.4:79722525-79722544 | MS.gene50432:CDS | 30.0% | |
TAAGCCTTTGATTGAAAAAG+AGG | + | chr4.4:79722419-79722438 | MS.gene50432:CDS | 30.0% | |
TGATTTACAACAACAGACTT+AGG | - | chr4.4:79722913-79722932 | None:intergenic | 30.0% | |
TTCAGATCAATGCAATCTTT+CGG | + | chr4.4:79724650-79724669 | MS.gene50432:intron | 30.0% | |
TTCAGTTACCAAATGTAGTA+TGG | + | chr4.4:79722081-79722100 | MS.gene50432:intron | 30.0% | |
TTGAATAACATGCAAGACTA+AGG | - | chr4.4:79722951-79722970 | None:intergenic | 30.0% | |
TTTCAGGACAAAATACATAC+GGG | + | chr4.4:79724866-79724885 | MS.gene50432:intron | 30.0% | |
TTTGTCCTGAAAACATTCAA+AGG | - | chr4.4:79724858-79724877 | None:intergenic | 30.0% | |
! | ACATAAACTAAACCGATTCT+GGG | - | chr4.4:79724061-79724080 | None:intergenic | 30.0% |
! | CCTAAGATGAAAGAAAGTTT+TGG | + | chr4.4:79724807-79724826 | MS.gene50432:intron | 30.0% |
!! | AAAAGTGTTGCTCATAATGT+TGG | - | chr4.4:79723375-79723394 | None:intergenic | 30.0% |
!! | CGTTTATTGATTATTTCTGC+TGG | + | chr4.4:79723461-79723480 | MS.gene50432:intron | 30.0% |
!!! | TTGACCTCTTTTTCAATCAA+AGG | - | chr4.4:79722426-79722445 | None:intergenic | 30.0% |
AAAAAGAGGTCAAGATCATG+TGG | + | chr4.4:79722433-79722452 | MS.gene50432:CDS | 35.0% | |
AAAATGAACCTGTAAATGGC+TGG | - | chr4.4:79722817-79722836 | None:intergenic | 35.0% | |
AAGTCATAAACATCCATGTC+TGG | - | chr4.4:79722175-79722194 | None:intergenic | 35.0% | |
AAGTGAACTCGGTAAAATCT+AGG | + | chr4.4:79724010-79724029 | MS.gene50432:intron | 35.0% | |
AATAATTGTTGCAAGGCAGT+AGG | - | chr4.4:79724786-79724805 | None:intergenic | 35.0% | |
AATATTAATGGCGATGCACT+AGG | + | chr4.4:79724409-79724428 | MS.gene50432:intron | 35.0% | |
AATGCATATTTGAACATCCC+CGG | - | chr4.4:79725042-79725061 | None:intergenic | 35.0% | |
AATTGCAATAACCTTGAGAC+CGG | - | chr4.4:79721901-79721920 | None:intergenic | 35.0% | |
ACATCTCCTCAATAGAGTTA+AGG | - | chr4.4:79721941-79721960 | None:intergenic | 35.0% | |
ACATTAAGGAATCGTGTAAG+CGG | - | chr4.4:79723590-79723609 | None:intergenic | 35.0% | |
AGAGGATGTATAGAAGCTAA+TGG | - | chr4.4:79723057-79723076 | None:intergenic | 35.0% | |
AGGAAAGAATCATACCATCA+AGG | - | chr4.4:79722656-79722675 | None:intergenic | 35.0% | |
AGTAGTGAATTATGCAGTCA+TGG | + | chr4.4:79722987-79723006 | MS.gene50432:intron | 35.0% | |
AGTGAACTCGGTAAAATCTA+GGG | + | chr4.4:79724011-79724030 | MS.gene50432:intron | 35.0% | |
ATCAACATATGGGAACAAGT+TGG | - | chr4.4:79723408-79723427 | None:intergenic | 35.0% | |
ATCAGAAGCCATACTACATT+TGG | - | chr4.4:79722092-79722111 | None:intergenic | 35.0% | |
ATTGCATTGCATTGTAGTCA+CGG | + | chr4.4:79724595-79724614 | MS.gene50432:intron | 35.0% | |
CTTAGGCAATAATTGTTGCA+AGG | - | chr4.4:79724793-79724812 | None:intergenic | 35.0% | |
CTTCAACATGTTGGAAAGAA+AGG | + | chr4.4:79722114-79722133 | MS.gene50432:CDS | 35.0% | |
CTTTCTTTCCAACATGTTGA+AGG | - | chr4.4:79722116-79722135 | None:intergenic | 35.0% | |
TCAACATATGGGAACAAGTT+GGG | - | chr4.4:79723407-79723426 | None:intergenic | 35.0% | |
! | AATCGGTTTAGTTTATGTCG+AGG | + | chr4.4:79724063-79724082 | MS.gene50432:intron | 35.0% |
! | CTTTGCAAGTGTTTCTTTTG+AGG | - | chr4.4:79722568-79722587 | None:intergenic | 35.0% |
! | GACATAAACTAAACCGATTC+TGG | - | chr4.4:79724062-79724081 | None:intergenic | 35.0% |
! | TATCAGTGAAACTTTCTAGC+CGG | + | chr4.4:79724178-79724197 | MS.gene50432:intron | 35.0% |
! | TCATTCCTTGATTAGTTGCA+GGG | - | chr4.4:79724971-79724990 | None:intergenic | 35.0% |
! | TGAGTTGTAGGGTAACATTT+TGG | - | chr4.4:79722201-79722220 | None:intergenic | 35.0% |
! | TGTTTTGTCAGATGTTGTGA+CGG | - | chr4.4:79723888-79723907 | None:intergenic | 35.0% |
! | TTCATTCCTTGATTAGTTGC+AGG | - | chr4.4:79724972-79724991 | None:intergenic | 35.0% |
! | TTCCACCTTTGAATGTTTTC+AGG | + | chr4.4:79724850-79724869 | MS.gene50432:intron | 35.0% |
!! | ACTAATCTTGTTCAAGTTGG+AGG | + | chr4.4:79724993-79725012 | MS.gene50432:CDS | 35.0% |
!! | CTAATCTTGTTCAAGTTGGA+GGG | + | chr4.4:79724994-79725013 | MS.gene50432:CDS | 35.0% |
!!! | ATGTTTGCTTTTGAAGCTGT+TGG | + | chr4.4:79724289-79724308 | MS.gene50432:intron | 35.0% |
AAAAGCAAACATGCTGATGC+TGG | - | chr4.4:79724281-79724300 | None:intergenic | 40.0% | |
AAAGCAAACATGCTGATGCT+GGG | - | chr4.4:79724280-79724299 | None:intergenic | 40.0% | |
AAATGCACATTTCTCAGGTC+AGG | + | chr4.4:79724314-79724333 | MS.gene50432:intron | 40.0% | |
ACATATTGCCAGCCATTTAC+AGG | + | chr4.4:79722806-79722825 | MS.gene50432:CDS | 40.0% | |
ATAGTCCCTGCAACTAATCA+AGG | + | chr4.4:79724963-79724982 | MS.gene50432:CDS | 40.0% | |
ATGCATATTTGAACATCCCC+GGG | - | chr4.4:79725041-79725060 | None:intergenic | 40.0% | |
ATTCTCGTGACCAAGACAAA+CGG | - | chr4.4:79722596-79722615 | None:intergenic | 40.0% | |
CACTCTCCTTAACTCTATTG+AGG | + | chr4.4:79721932-79721951 | MS.gene50432:CDS | 40.0% | |
CAGAATTCAGGAGAAAACTC+TGG | - | chr4.4:79723295-79723314 | None:intergenic | 40.0% | |
CTGTATAGCACGAGTTAATG+CGG | - | chr4.4:79723729-79723748 | None:intergenic | 40.0% | |
GAAGTGTGCAACATCAAGAA+TGG | + | chr4.4:79723855-79723874 | MS.gene50432:intron | 40.0% | |
GCAAACTTCAAAGCAGAAAC+AGG | + | chr4.4:79724930-79724949 | MS.gene50432:CDS | 40.0% | |
GGGGATGTTCAAATATGCAT+TGG | + | chr4.4:79725041-79725060 | MS.gene50432:CDS | 40.0% | |
GTCCTGAAAACATTCAAAGG+TGG | - | chr4.4:79724855-79724874 | None:intergenic | 40.0% | |
TGGACAAATGCACATTTCTC+AGG | + | chr4.4:79724309-79724328 | MS.gene50432:intron | 40.0% | |
TGTATAGCACGAGTTAATGC+GGG | - | chr4.4:79723728-79723747 | None:intergenic | 40.0% | |
TTCTGATGCCTTCAACATGT+TGG | + | chr4.4:79722105-79722124 | MS.gene50432:CDS | 40.0% | |
! | AGGGATTAGTATGGTTGGTT+TGG | + | chr4.4:79725013-79725032 | MS.gene50432:CDS | 40.0% |
! | GACAGGAATGTTGAGTTGTA+GGG | - | chr4.4:79722212-79722231 | None:intergenic | 40.0% |
! | TGACAGGAATGTTGAGTTGT+AGG | - | chr4.4:79722213-79722232 | None:intergenic | 40.0% |
!! | GTTTCTGCTTTGAAGTTTGC+AGG | - | chr4.4:79724930-79724949 | None:intergenic | 40.0% |
!! | TCAAGTTGGAGGGATTAGTA+TGG | + | chr4.4:79725004-79725023 | MS.gene50432:CDS | 40.0% |
AAGCAAACATGCTGATGCTG+GGG | - | chr4.4:79724279-79724298 | None:intergenic | 45.0% | |
AATGTGGGGCTTGCGAATAT+TGG | + | chr4.4:79722394-79722413 | MS.gene50432:CDS | 45.0% | |
AGAAGCTACTCACTCAATGC+CGG | + | chr4.4:79723262-79723281 | MS.gene50432:CDS | 45.0% | |
AGCTCAACAGAAGAGACAGA+AGG | + | chr4.4:79723191-79723210 | MS.gene50432:CDS | 45.0% | |
ATTGCGATGCACAACGACAT+TGG | + | chr4.4:79723333-79723352 | MS.gene50432:CDS | 45.0% | |
CAACAGAAGAGACAGAAGGT+AGG | + | chr4.4:79723195-79723214 | MS.gene50432:CDS | 45.0% | |
CAACGACATTGGGTGGAAAT+TGG | + | chr4.4:79723344-79723363 | MS.gene50432:CDS | 45.0% | |
CGCATTAACTCGTGCTATAC+AGG | + | chr4.4:79723727-79723746 | MS.gene50432:intron | 45.0% | |
CTACGTGCAGTCAATCAACT+AGG | + | chr4.4:79722630-79722649 | MS.gene50432:CDS | 45.0% | |
CTGCTGGAAGAAGATGATGA+AGG | + | chr4.4:79723477-79723496 | MS.gene50432:intron | 45.0% | |
GAACTCGGTAAAATCTAGGG+AGG | + | chr4.4:79724014-79724033 | MS.gene50432:intron | 45.0% | |
GAAGATGATGAAGGCAGAGA+AGG | + | chr4.4:79723486-79723505 | MS.gene50432:intron | 45.0% | |
GACATTGTGTCGCAGAATTC+AGG | - | chr4.4:79723307-79723326 | None:intergenic | 45.0% | |
GTCAATCAACTAGGCCTTGA+TGG | + | chr4.4:79722639-79722658 | MS.gene50432:CDS | 45.0% | |
TGAAATTGTTGGAAGCTCGG+TGG | + | chr4.4:79722503-79722522 | MS.gene50432:CDS | 45.0% | |
TGATGCTCATATGCCAGACA+TGG | + | chr4.4:79722159-79722178 | MS.gene50432:CDS | 45.0% | |
TGTGAATGGGAACTTCTGAG+AGG | - | chr4.4:79724702-79724721 | None:intergenic | 45.0% | |
TTCTCGTGACCAAGACAAAC+GGG | - | chr4.4:79722595-79722614 | None:intergenic | 45.0% | |
TTGCGATGCACAACGACATT+GGG | + | chr4.4:79723334-79723353 | MS.gene50432:CDS | 45.0% | |
! | GTGAATGGGAACTTCTGAGA+GGG | - | chr4.4:79724701-79724720 | None:intergenic | 45.0% |
! | GTTGGAGGGATTAGTATGGT+TGG | + | chr4.4:79725008-79725027 | MS.gene50432:CDS | 45.0% |
!!! | TAGGGAGGAAAGTGTTTTGC+AGG | + | chr4.4:79724029-79724048 | MS.gene50432:intron | 45.0% |
AGAAAACTCTGGTCCTGCTC+CGG | - | chr4.4:79723284-79723303 | None:intergenic | 50.0% | |
CAAAGAAGGCCCGTTTGTCT+TGG | + | chr4.4:79722583-79722602 | MS.gene50432:CDS | 50.0% | |
CAATAACCTTGAGACCGGCT+GGG | - | chr4.4:79721896-79721915 | None:intergenic | 50.0% | |
TAATGGCGATGCACTAGGCA+AGG | + | chr4.4:79724414-79724433 | MS.gene50432:intron | 50.0% | |
TCGTGTAAGCGGAGCAATAG+TGG | - | chr4.4:79723579-79723598 | None:intergenic | 50.0% | |
TGCAGGTTACTGCCCAGAAT+CGG | + | chr4.4:79724046-79724065 | MS.gene50432:intron | 50.0% | |
!! | AGTATGGTTGGTTTGGCACC+CGG | + | chr4.4:79725020-79725039 | MS.gene50432:CDS | 50.0% |
ATCATTCCCAGCCGGTCTCA+AGG | + | chr4.4:79721887-79721906 | MS.gene50432:CDS | 55.0% | |
CGATGCACAACGACATTGGG+TGG | + | chr4.4:79723337-79723356 | MS.gene50432:CDS | 55.0% | |
GACAACCCATCATTCCCAGC+CGG | + | chr4.4:79721879-79721898 | MS.gene50432:CDS | 55.0% | |
GCAATAACCTTGAGACCGGC+TGG | - | chr4.4:79721897-79721916 | None:intergenic | 55.0% | |
GCTTGTTTGCAAGGAGGTCG+AGG | - | chr4.4:79724257-79724276 | None:intergenic | 55.0% | |
TACTCACTCAATGCCGGAGC+AGG | + | chr4.4:79723268-79723287 | MS.gene50432:CDS | 55.0% | |
TGAGACCGGCTGGGAATGAT+GGG | - | chr4.4:79721887-79721906 | None:intergenic | 55.0% | |
TGTTTGCAAGGAGGTCGAGG+AGG | - | chr4.4:79724254-79724273 | None:intergenic | 55.0% | |
TTGAGACCGGCTGGGAATGA+TGG | - | chr4.4:79721888-79721907 | None:intergenic | 55.0% | |
! | GATGCTGGGGCTTGTTTGCA+AGG | - | chr4.4:79724266-79724285 | None:intergenic | 55.0% |
!! | GTATGGTTGGTTTGGCACCC+GGG | + | chr4.4:79725021-79725040 | MS.gene50432:CDS | 55.0% |
!! | TATGGTTGGTTTGGCACCCG+GGG | + | chr4.4:79725022-79725041 | MS.gene50432:CDS | 55.0% |
! | GCTGGGGCTTGTTTGCAAGG+AGG | - | chr4.4:79724263-79724282 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 79721864 | 79725067 | 79721864 | ID=MS.gene50432 |
chr4.4 | mRNA | 79721864 | 79725067 | 79721864 | ID=MS.gene50432.t1;Parent=MS.gene50432 |
chr4.4 | exon | 79721864 | 79721981 | 79721864 | ID=MS.gene50432.t1.exon1;Parent=MS.gene50432.t1 |
chr4.4 | CDS | 79721864 | 79721981 | 79721864 | ID=cds.MS.gene50432.t1;Parent=MS.gene50432.t1 |
chr4.4 | exon | 79722086 | 79722235 | 79722086 | ID=MS.gene50432.t1.exon2;Parent=MS.gene50432.t1 |
chr4.4 | CDS | 79722086 | 79722235 | 79722086 | ID=cds.MS.gene50432.t1;Parent=MS.gene50432.t1 |
chr4.4 | exon | 79722349 | 79722660 | 79722349 | ID=MS.gene50432.t1.exon3;Parent=MS.gene50432.t1 |
chr4.4 | CDS | 79722349 | 79722660 | 79722349 | ID=cds.MS.gene50432.t1;Parent=MS.gene50432.t1 |
chr4.4 | exon | 79722751 | 79722827 | 79722751 | ID=MS.gene50432.t1.exon4;Parent=MS.gene50432.t1 |
chr4.4 | CDS | 79722751 | 79722827 | 79722751 | ID=cds.MS.gene50432.t1;Parent=MS.gene50432.t1 |
chr4.4 | exon | 79723170 | 79723450 | 79723170 | ID=MS.gene50432.t1.exon5;Parent=MS.gene50432.t1 |
chr4.4 | CDS | 79723170 | 79723450 | 79723170 | ID=cds.MS.gene50432.t1;Parent=MS.gene50432.t1 |
chr4.4 | exon | 79724872 | 79725067 | 79724872 | ID=MS.gene50432.t1.exon6;Parent=MS.gene50432.t1 |
chr4.4 | CDS | 79724872 | 79725067 | 79724872 | ID=cds.MS.gene50432.t1;Parent=MS.gene50432.t1 |
Gene Sequence |
Protein sequence |