Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50876.t1 | XP_013459055.1 | 90.8 | 393 | 27 | 2 | 1 | 384 | 1 | 393 | 1.50E-197 | 698.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50876.t1 | Q8AVN9 | 25.7 | 187 | 116 | 4 | 118 | 304 | 227 | 390 | 2.0e-09 | 65.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50876.t1 | A0A072UVJ5 | 90.8 | 393 | 27 | 2 | 1 | 384 | 1 | 393 | 1.1e-197 | 698.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene50876.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50876.t1 | MTR_3g023750 | 93.122 | 378 | 22 | 1 | 11 | 384 | 16 | 393 | 0.0 | 719 |
| MS.gene50876.t1 | MTR_5g097950 | 70.306 | 229 | 68 | 0 | 156 | 384 | 268 | 496 | 1.86e-104 | 317 |
| MS.gene50876.t1 | MTR_5g097950 | 70.345 | 145 | 34 | 1 | 46 | 190 | 17 | 152 | 1.67e-57 | 195 |
| MS.gene50876.t1 | MTR_5g097950 | 32.301 | 226 | 109 | 9 | 161 | 378 | 209 | 398 | 4.18e-15 | 77.0 |
| MS.gene50876.t1 | MTR_5g097950 | 29.457 | 129 | 69 | 3 | 113 | 220 | 361 | 488 | 4.82e-11 | 64.7 |
| MS.gene50876.t1 | MTR_5g097950 | 70.306 | 229 | 68 | 0 | 156 | 384 | 304 | 532 | 4.87e-104 | 317 |
| MS.gene50876.t1 | MTR_5g097950 | 70.345 | 145 | 34 | 1 | 46 | 190 | 53 | 188 | 3.99e-57 | 195 |
| MS.gene50876.t1 | MTR_5g097950 | 32.301 | 226 | 109 | 9 | 161 | 378 | 245 | 434 | 4.02e-15 | 77.0 |
| MS.gene50876.t1 | MTR_5g097950 | 29.457 | 129 | 69 | 3 | 113 | 220 | 397 | 524 | 4.26e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50876.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 7.25e-22 | 98.2 |
| MS.gene50876.t1 | AT5G61190 | 24.476 | 286 | 162 | 10 | 119 | 374 | 242 | 503 | 1.09e-12 | 70.1 |
| MS.gene50876.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 3.69e-12 | 68.6 |
| MS.gene50876.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 7.90e-22 | 98.2 |
| MS.gene50876.t1 | AT5G61190 | 25.614 | 285 | 152 | 11 | 119 | 374 | 242 | 495 | 1.15e-13 | 73.2 |
| MS.gene50876.t1 | AT5G61190 | 24.537 | 216 | 113 | 6 | 112 | 284 | 289 | 497 | 3.82e-13 | 71.6 |
| MS.gene50876.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 146 | 308 | 8.54e-22 | 98.2 |
| MS.gene50876.t1 | AT5G61190 | 24.476 | 286 | 162 | 10 | 119 | 374 | 148 | 409 | 1.37e-12 | 69.7 |
| MS.gene50876.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 195 | 411 | 4.57e-12 | 68.2 |
| MS.gene50876.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 146 | 308 | 8.54e-22 | 98.2 |
| MS.gene50876.t1 | AT5G61190 | 24.476 | 286 | 162 | 10 | 119 | 374 | 148 | 409 | 1.37e-12 | 69.7 |
| MS.gene50876.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 195 | 411 | 4.57e-12 | 68.2 |
| MS.gene50876.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 1.02e-21 | 97.8 |
| MS.gene50876.t1 | AT5G61190 | 24.296 | 284 | 165 | 9 | 119 | 374 | 242 | 503 | 1.40e-12 | 69.7 |
| MS.gene50876.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 4.64e-12 | 68.2 |
| MS.gene50876.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 1.06e-21 | 97.8 |
| MS.gene50876.t1 | AT5G61190 | 24.476 | 286 | 162 | 10 | 119 | 374 | 242 | 503 | 1.31e-12 | 70.1 |
| MS.gene50876.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 5.08e-12 | 68.2 |
| MS.gene50876.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 1.07e-21 | 97.8 |
| MS.gene50876.t1 | AT5G61190 | 24.296 | 284 | 165 | 9 | 119 | 374 | 242 | 503 | 1.34e-12 | 70.1 |
| MS.gene50876.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 4.74e-12 | 68.2 |
| MS.gene50876.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 1.09e-21 | 97.8 |
| MS.gene50876.t1 | AT5G61190 | 24.476 | 286 | 162 | 10 | 119 | 374 | 242 | 503 | 1.45e-12 | 69.7 |
| MS.gene50876.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 4.96e-12 | 68.2 |
| MS.gene50876.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 1.54e-21 | 97.1 |
| MS.gene50876.t1 | AT5G61190 | 24.296 | 284 | 165 | 9 | 119 | 374 | 242 | 503 | 1.06e-12 | 70.1 |
| MS.gene50876.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 4.70e-12 | 68.2 |
| MS.gene50876.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 1.61e-21 | 97.1 |
| MS.gene50876.t1 | AT5G61190 | 24.296 | 284 | 165 | 9 | 119 | 374 | 242 | 503 | 1.05e-12 | 70.1 |
| MS.gene50876.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 4.72e-12 | 68.2 |
| MS.gene50876.t1 | AT5G61190 | 30.412 | 194 | 104 | 4 | 189 | 382 | 240 | 402 | 1.61e-21 | 97.1 |
| MS.gene50876.t1 | AT5G61190 | 24.296 | 284 | 165 | 9 | 119 | 374 | 242 | 503 | 1.05e-12 | 70.1 |
| MS.gene50876.t1 | AT5G61190 | 23.661 | 224 | 113 | 6 | 112 | 284 | 289 | 505 | 4.72e-12 | 68.2 |
Find 84 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACCATAGCAGCATGTTTC+TGG | 0.170828 | 3.1:+14243705 | None:intergenic |
| AACCAACAGATTATCAAAAT+TGG | 0.227652 | 3.1:-14248196 | MS.gene50876:CDS |
| TCTGATGCCTTCTTTGGTTT+TGG | 0.255884 | 3.1:+14243854 | None:intergenic |
| ACATGGCCACCACAAGTTTA+TGG | 0.265762 | 3.1:-14246519 | MS.gene50876:CDS |
| ACCGCAACAAATACTTTAAT+CGG | 0.278525 | 3.1:-14243905 | MS.gene50876:CDS |
| TCAAGTTCTGATGCCTTCTT+TGG | 0.279559 | 3.1:+14243848 | None:intergenic |
| GCAGAATCAACCTGTTTCTT+AGG | 0.337690 | 3.1:+14246255 | None:intergenic |
| GTTGCCTTGATGTCTAATAA+TGG | 0.355656 | 3.1:-14244154 | MS.gene50876:CDS |
| GTTCTTCAAGTGTTTCTTAC+CGG | 0.356623 | 3.1:+14243985 | None:intergenic |
| CGCTTGAATTCGGCAATAGA+TGG | 0.359328 | 3.1:+14244124 | None:intergenic |
| AACACCGTTACGCTTGAATT+CGG | 0.361255 | 3.1:+14244114 | None:intergenic |
| CACGCAGAAGGCAAACTTGC+AGG | 0.366395 | 3.1:+14246549 | None:intergenic |
| AAGCTTTGGTGACTTTGGTT+TGG | 0.371601 | 3.1:+14246469 | None:intergenic |
| TTGCCTTGATGTCTAATAAT+GGG | 0.382762 | 3.1:-14244153 | MS.gene50876:CDS |
| GGAGGATGAAGTGAAGGATC+AGG | 0.403946 | 3.1:+14248281 | None:intergenic |
| TCTCAAAGCTTTGGTGACTT+TGG | 0.404347 | 3.1:+14246464 | None:intergenic |
| ATACAAGGACAAGCGTTAAT+TGG | 0.404953 | 3.1:-14246300 | MS.gene50876:CDS |
| GCAATCTGAGCCTAAGAAAC+AGG | 0.407648 | 3.1:-14246265 | MS.gene50876:CDS |
| TAAAGTATTTGTTGCGGTGG+CGG | 0.415658 | 3.1:+14243910 | None:intergenic |
| GCATATATCAAACATCTTGC+TGG | 0.416947 | 3.1:-14246189 | MS.gene50876:CDS |
| CACTTCACATCTCAAAGCTT+TGG | 0.420423 | 3.1:+14246455 | None:intergenic |
| GAAGGAGGAGCTGCAGTTGA+TGG | 0.421675 | 3.1:-14243797 | MS.gene50876:CDS |
| TTGTTGTTGCTGGAAATTGT+AGG | 0.427790 | 3.1:+14248328 | None:intergenic |
| GCAAGATTAATTGTAACAGC+AGG | 0.443520 | 3.1:-14244030 | MS.gene50876:CDS |
| TGGGAGAAAGCACGCTGCTC+AGG | 0.446737 | 3.1:-14246169 | MS.gene50876:intron |
| AAGAAACGTAAAGTTGTAGA+AGG | 0.448799 | 3.1:-14243815 | MS.gene50876:CDS |
| TGGGCGGTGTAAAGAGAAAC+AGG | 0.453372 | 3.1:+14248218 | None:intergenic |
| GAAACACAAGAAGAATTTGC+AGG | 0.456975 | 3.1:-14246379 | MS.gene50876:CDS |
| CTTACAAGATCATATCTGAT+AGG | 0.461948 | 3.1:+14248155 | None:intergenic |
| GGTGAAAATTGAAAACTGTC+TGG | 0.474169 | 3.1:+14243735 | None:intergenic |
| CTTCTAATATTGCAGGCTGT+TGG | 0.480500 | 3.1:-14246597 | MS.gene50876:intron |
| GGCTCAGATTGCTTGACTAC+AGG | 0.484030 | 3.1:+14246276 | None:intergenic |
| GAGCTTGGTATTGTTGTTGA+GGG | 0.489208 | 3.1:+14248354 | None:intergenic |
| AGTATTTGTTGCGGTGGCGG+TGG | 0.490137 | 3.1:+14243913 | None:intergenic |
| GCAGGGTCAGTCACTGGTTG+AGG | 0.494322 | 3.1:-14243677 | None:intergenic |
| TGTTGCGGTGGCGGTGGAAG+TGG | 0.494772 | 3.1:+14243919 | None:intergenic |
| TTTGCAAGTGGGTCAGTGCC+AGG | 0.495030 | 3.1:+14248260 | None:intergenic |
| TGAGCTTGGTATTGTTGTTG+AGG | 0.503622 | 3.1:+14248353 | None:intergenic |
| TTGGTGACTTTGGTTTGGTT+AGG | 0.506602 | 3.1:+14246474 | None:intergenic |
| CATATATCAAACATCTTGCT+GGG | 0.508931 | 3.1:-14246188 | MS.gene50876:CDS |
| TGTTGTTGCTGGAAATTGTA+GGG | 0.518373 | 3.1:+14248329 | None:intergenic |
| TCTTATGAAAGTCACATAGC+TGG | 0.520481 | 3.1:-14246405 | MS.gene50876:CDS |
| GAATTCAAGCGTAACGGTGT+TGG | 0.521387 | 3.1:-14244112 | MS.gene50876:CDS |
| GATCCTTCACTTCATCCTCC+TGG | 0.522615 | 3.1:-14248278 | MS.gene50876:CDS |
| ACATGCTGCTATGGTGAAGA+AGG | 0.523999 | 3.1:-14243699 | MS.gene50876:CDS |
| TTCGCATGAGATGCAATAGT+AGG | 0.525742 | 3.1:+14246345 | None:intergenic |
| CGATCAACCAAAACCAAAGA+AGG | 0.528394 | 3.1:-14243861 | MS.gene50876:CDS |
| AATCCCATTATTAGACATCA+AGG | 0.530860 | 3.1:+14244150 | None:intergenic |
| AAGAAGGCAGGGTCAGTCAC+TGG | 0.535623 | 3.1:-14243683 | MS.gene50876:CDS |
| GCTGCTATGGTGAAGAAGGC+AGG | 0.537781 | 3.1:-14243695 | MS.gene50876:CDS |
| AAAAGCTGCTAAGAAAATCA+AGG | 0.540668 | 3.1:-14244080 | MS.gene50876:CDS |
| CCGCAACAAATACTTTAATC+GGG | 0.541756 | 3.1:-14243904 | MS.gene50876:CDS |
| CAGCATGTTTCTGGCCAACA+AGG | 0.542850 | 3.1:+14243714 | None:intergenic |
| TAAGAAACACTTGAAGAACT+TGG | 0.549430 | 3.1:-14243981 | MS.gene50876:CDS |
| CAAGATTAATTGTAACAGCA+GGG | 0.550872 | 3.1:-14244029 | MS.gene50876:CDS |
| CCCGATTAAAGTATTTGTTG+CGG | 0.558626 | 3.1:+14243904 | None:intergenic |
| TTGATGTCTAATAATGGGAT+TGG | 0.567386 | 3.1:-14244148 | MS.gene50876:CDS |
| ATATACATTACACACTTAGC+CGG | 0.575976 | 3.1:-14244004 | MS.gene50876:CDS |
| GAAACAGGTTGATTCTGCAA+CGG | 0.579888 | 3.1:-14246250 | MS.gene50876:CDS |
| TTGATAATCTGTTGGTTGGG+CGG | 0.583308 | 3.1:+14248202 | None:intergenic |
| AGTTTATGGCAATGAGACTA+CGG | 0.585558 | 3.1:-14246505 | MS.gene50876:CDS |
| TATCTGATAGGTTCAGATTG+TGG | 0.585811 | 3.1:+14248167 | None:intergenic |
| CTTCTGCGTGGAATGGTACA+TGG | 0.585831 | 3.1:-14246536 | MS.gene50876:CDS |
| TCAAGGTTGCTCAGTCTGCA+TGG | 0.588753 | 3.1:-14244063 | MS.gene50876:CDS |
| GATTAAAGTATTTGTTGCGG+TGG | 0.590642 | 3.1:+14243907 | None:intergenic |
| CATGTACCATTCCACGCAGA+AGG | 0.592933 | 3.1:+14246537 | None:intergenic |
| GGAAATTGTAGGGTTGAGCT+TGG | 0.593362 | 3.1:+14248339 | None:intergenic |
| AGTTTGCCTTCTGCGTGGAA+TGG | 0.594357 | 3.1:-14246543 | MS.gene50876:CDS |
| GTGCCAGGAGGATGAAGTGA+AGG | 0.595047 | 3.1:+14248275 | None:intergenic |
| ACTGACACAAGTAGTATACA+AGG | 0.597057 | 3.1:-14246315 | MS.gene50876:CDS |
| TGGCCAGAAACATGCTGCTA+TGG | 0.598112 | 3.1:-14243708 | MS.gene50876:CDS |
| ATCGGGCCACAAGAAAAGCC+AGG | 0.598973 | 3.1:-14243887 | MS.gene50876:CDS |
| CTGCAAGTTTGCCTTCTGCG+TGG | 0.600287 | 3.1:-14246548 | MS.gene50876:CDS |
| GAGGATGAAGTGAAGGATCA+GGG | 0.602017 | 3.1:+14248282 | None:intergenic |
| GTCTCATTGCCATAAACTTG+TGG | 0.604753 | 3.1:+14246510 | None:intergenic |
| AAACGTAAAGTTGTAGAAGG+AGG | 0.609951 | 3.1:-14243812 | MS.gene50876:CDS |
| CTGCTATGGTGAAGAAGGCA+GGG | 0.613128 | 3.1:-14243694 | MS.gene50876:CDS |
| AAAGATGTTGAATTTGCAAG+TGG | 0.619628 | 3.1:+14248248 | None:intergenic |
| TCATTGCCATAAACTTGTGG+TGG | 0.643923 | 3.1:+14246513 | None:intergenic |
| AAGATGTTGAATTTGCAAGT+GGG | 0.649561 | 3.1:+14248249 | None:intergenic |
| ATTGCCGAATTCAAGCGTAA+CGG | 0.711887 | 3.1:-14244118 | MS.gene50876:CDS |
| GCAAGTGGGTCAGTGCCAGG+AGG | 0.726366 | 3.1:+14248263 | None:intergenic |
| AATGTGCACATTATGCAATG+TGG | 0.739375 | 3.1:-14243768 | MS.gene50876:CDS |
| GCGGTGTAAAGAGAAACAGG+AGG | 0.820151 | 3.1:+14248221 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAACATTTTAAAAAAATG+TGG | - | chr3.1:14245225-14245244 | MS.gene50876:intron | 10.0% |
| !! | AAAGGTTATATATATACAAA+TGG | + | chr3.1:14247446-14247465 | None:intergenic | 15.0% |
| !! | AATATTAAAAGGATGAAAAT+TGG | - | chr3.1:14246083-14246102 | MS.gene50876:intron | 15.0% |
| !! | AGACAAGAAAAATATTTAAA+AGG | - | chr3.1:14247296-14247315 | MS.gene50876:intron | 15.0% |
| !! | CATATATTGTAAATAGAATT+GGG | - | chr3.1:14245308-14245327 | MS.gene50876:intron | 15.0% |
| !! | TAATACATATAATTGTCAAA+TGG | - | chr3.1:14245048-14245067 | MS.gene50876:intron | 15.0% |
| !! | TATGATAAATAAATATCATG+TGG | - | chr3.1:14247486-14247505 | MS.gene50876:intron | 15.0% |
| !! | TCATATATTGTAAATAGAAT+TGG | - | chr3.1:14245307-14245326 | MS.gene50876:intron | 15.0% |
| !! | TTTAATATCAATTGTTAATC+AGG | - | chr3.1:14247047-14247066 | MS.gene50876:intron | 15.0% |
| !!! | ACTGTTATTTTTATCTTAAT+TGG | - | chr3.1:14246147-14246166 | MS.gene50876:intron | 15.0% |
| !!! | ATAATTAGGGTTTTTAAAAT+GGG | - | chr3.1:14244600-14244619 | MS.gene50876:intron | 15.0% |
| !!! | GTTTTTAAAAGTTGAAAAAA+AGG | + | chr3.1:14247134-14247153 | None:intergenic | 15.0% |
| !!! | TTAAGTAAAAATACTCTTTT+TGG | - | chr3.1:14247533-14247552 | MS.gene50876:intron | 15.0% |
| !! | AAAAAATACTTGTTTGTTCA+AGG | + | chr3.1:14247636-14247655 | None:intergenic | 20.0% |
| !! | AAAATAGATAGAGAAAATAG+AGG | - | chr3.1:14246743-14246762 | MS.gene50876:intron | 20.0% |
| !! | AAATTGTGATATATATTGTG+AGG | - | chr3.1:14245332-14245351 | MS.gene50876:intron | 20.0% |
| !! | AATACAAAATTGTCAAATAG+TGG | - | chr3.1:14244815-14244834 | MS.gene50876:intron | 20.0% |
| !! | AATTCAAAACCTTAACATAA+AGG | + | chr3.1:14245378-14245397 | None:intergenic | 20.0% |
| !! | ATATATATACAAATGGAGTT+TGG | + | chr3.1:14247439-14247458 | None:intergenic | 20.0% |
| !! | ATTGTCTATGATATAGAATA+AGG | + | chr3.1:14245967-14245986 | None:intergenic | 20.0% |
| !! | ATTTGAAAACTAAGATCAAA+AGG | + | chr3.1:14244085-14244104 | None:intergenic | 20.0% |
| !! | CAAAATAAATAAAGAACAAG+TGG | + | chr3.1:14247352-14247371 | None:intergenic | 20.0% |
| !! | CATTTATTAATTAACTCTGT+AGG | - | chr3.1:14246221-14246240 | MS.gene50876:CDS | 20.0% |
| !! | CTACAGAGTTAATTAATAAA+TGG | + | chr3.1:14246223-14246242 | None:intergenic | 20.0% |
| !! | TTTGAAAACTAAGATCAAAA+GGG | + | chr3.1:14244084-14244103 | None:intergenic | 20.0% |
| !!! | CATAATTAGGGTTTTTAAAA+TGG | - | chr3.1:14244599-14244618 | MS.gene50876:intron | 20.0% |
| !!! | CTTAATTAGGGTTTTTAAAA+TGG | - | chr3.1:14244363-14244382 | MS.gene50876:intron | 20.0% |
| !!! | GAATAAGTTGAATACAATAA+TGG | + | chr3.1:14247274-14247293 | None:intergenic | 20.0% |
| !!! | GTTAAGGTTTTGAATTTTTT+TGG | - | chr3.1:14245382-14245401 | MS.gene50876:intron | 20.0% |
| !!! | TCATAATTAGGGTTTTTAAA+TGG | - | chr3.1:14244502-14244521 | MS.gene50876:intron | 20.0% |
| !!! | TTTCTTATGTTATGTCATTT+GGG | - | chr3.1:14244124-14244143 | MS.gene50876:CDS | 20.0% |
| !!! | TTTCTTATGTTTTTTCATCT+GGG | - | chr3.1:14243958-14243977 | MS.gene50876:CDS | 20.0% |
| !!! | TTTTAAAATGGAAATGATTG+TGG | - | chr3.1:14244375-14244394 | MS.gene50876:intron | 20.0% |
| !!! | TTTTATTTTAATGCAAGTCA+TGG | + | chr3.1:14246045-14246064 | None:intergenic | 20.0% |
| !!! | TTTTCTTATGTTATGTCATT+TGG | - | chr3.1:14244123-14244142 | MS.gene50876:CDS | 20.0% |
| !!! | TTTTCTTATGTTTTTTCATC+TGG | - | chr3.1:14243957-14243976 | MS.gene50876:CDS | 20.0% |
| ! | AACAAATAAAATGAGCAACT+TGG | + | chr3.1:14247787-14247806 | None:intergenic | 25.0% |
| ! | AACCAACAGATTATCAAAAT+TGG | - | chr3.1:14243842-14243861 | MS.gene50876:CDS | 25.0% |
| ! | AAGAAGAAAAAACATACAAG+TGG | + | chr3.1:14244987-14245006 | None:intergenic | 25.0% |
| ! | ACAAATAAAATGAGCAACTT+GGG | + | chr3.1:14247786-14247805 | None:intergenic | 25.0% |
| ! | AGCAACAAAATAGTGAAAAA+CGG | - | chr3.1:14246782-14246801 | MS.gene50876:intron | 25.0% |
| ! | ATGTCGTGATTATCATAATT+AGG | - | chr3.1:14244490-14244509 | MS.gene50876:intron | 25.0% |
| ! | ATTCGAAAACAATGATCAAA+AGG | + | chr3.1:14243919-14243938 | None:intergenic | 25.0% |
| ! | GACAGAACAAGAATATTAAA+AGG | - | chr3.1:14246072-14246091 | MS.gene50876:intron | 25.0% |
| ! | GTATGAAAATAAGAGAATCA+TGG | + | chr3.1:14246347-14246366 | None:intergenic | 25.0% |
| ! | GTTGGAATTCATCTTAATTA+GGG | - | chr3.1:14244351-14244370 | MS.gene50876:intron | 25.0% |
| ! | TAACTGTTGAAATGTTTCAA+AGG | + | chr3.1:14247464-14247483 | None:intergenic | 25.0% |
| ! | TACATATAATTGTCAAATGG+TGG | - | chr3.1:14245051-14245070 | MS.gene50876:intron | 25.0% |
| ! | TAGGTATTAATACAACAACT+TGG | + | chr3.1:14247756-14247775 | None:intergenic | 25.0% |
| ! | TGATTTGATCCTTTATGTTA+AGG | - | chr3.1:14245366-14245385 | MS.gene50876:intron | 25.0% |
| ! | TGTCGTGATTATCATAATTA+GGG | - | chr3.1:14244491-14244510 | MS.gene50876:intron | 25.0% |
| ! | TGTTGGAATTCATCTTAATT+AGG | - | chr3.1:14244350-14244369 | MS.gene50876:intron | 25.0% |
| ! | TTATCTATAGATATACATCC+AGG | + | chr3.1:14247727-14247746 | None:intergenic | 25.0% |
| ! | TTCGAAAACAATGATCAAAA+GGG | + | chr3.1:14243918-14243937 | None:intergenic | 25.0% |
| !! | AAATGATAGAAGATTGATTC+TGG | + | chr3.1:14247323-14247342 | None:intergenic | 25.0% |
| !! | AACAATAGTCTTTTAGTAGA+AGG | - | chr3.1:14246991-14247010 | MS.gene50876:intron | 25.0% |
| !! | TTCTTATGTTATGTCATTTG+GGG | - | chr3.1:14244125-14244144 | MS.gene50876:CDS | 25.0% |
| !! | TTTTTCACTATTTTGTTGCT+TGG | + | chr3.1:14246782-14246801 | None:intergenic | 25.0% |
| !!! | AATTTTGATAATCTGTTGGT+TGG | + | chr3.1:14243843-14243862 | None:intergenic | 25.0% |
| !!! | ATCCAATTTTGATAATCTGT+TGG | + | chr3.1:14243847-14243866 | None:intergenic | 25.0% |
| !!! | ATGAAATAGTGGATAAGTTT+TGG | - | chr3.1:14244279-14244298 | MS.gene50876:intron | 25.0% |
| !!! | ATTTTGATAATCTGTTGGTT+GGG | + | chr3.1:14243842-14243861 | None:intergenic | 25.0% |
| !!! | TAATTTTGACAACAACAATG+AGG | - | chr3.1:14247560-14247579 | MS.gene50876:intron | 25.0% |
| !!! | TTACATGCATTTTAGCTAAA+TGG | + | chr3.1:14246247-14246266 | None:intergenic | 25.0% |
| !!! | TTCATTTTAACGTAGTTGTT+TGG | - | chr3.1:14244048-14244067 | MS.gene50876:CDS | 25.0% |
| AAAAGCTGCTAAGAAAATCA+AGG | - | chr3.1:14247958-14247977 | MS.gene50876:intron | 30.0% | |
| AAAGATGTTGAATTTGCAAG+TGG | + | chr3.1:14243793-14243812 | None:intergenic | 30.0% | |
| AAGAAACGTAAAGTTGTAGA+AGG | - | chr3.1:14248223-14248242 | MS.gene50876:CDS | 30.0% | |
| AAGATGAATGATGATAGTCA+GGG | - | chr3.1:14245252-14245271 | MS.gene50876:intron | 30.0% | |
| AAGATGTTGAATTTGCAAGT+GGG | + | chr3.1:14243792-14243811 | None:intergenic | 30.0% | |
| AATCCCATTATTAGACATCA+AGG | + | chr3.1:14247891-14247910 | None:intergenic | 30.0% | |
| AATGTGAAGTTCTGTTAAGT+GGG | - | chr3.1:14244327-14244346 | MS.gene50876:intron | 30.0% | |
| ACCATTTCATAGTCAAATTG+CGG | + | chr3.1:14246533-14246552 | None:intergenic | 30.0% | |
| ACCGCAACAAATACTTTAAT+CGG | - | chr3.1:14248133-14248152 | MS.gene50876:intron | 30.0% | |
| AGAAAATAGAGGAAAAACAG+AGG | - | chr3.1:14246754-14246773 | MS.gene50876:intron | 30.0% | |
| ATAATTCAGGGATAACAGAA+TGG | - | chr3.1:14247075-14247094 | MS.gene50876:intron | 30.0% | |
| ATATACATTACACACTTAGC+CGG | - | chr3.1:14248034-14248053 | MS.gene50876:intron | 30.0% | |
| ATGAAGACAAAGGCTATAAA+TGG | - | chr3.1:14246453-14246472 | MS.gene50876:CDS | 30.0% | |
| ATGTCGTGATTGTCATAATT+AGG | - | chr3.1:14244586-14244605 | MS.gene50876:intron | 30.0% | |
| ATTCTGTTATCCCTGAATTA+TGG | + | chr3.1:14247076-14247095 | None:intergenic | 30.0% | |
| CAAGATTAATTGTAACAGCA+GGG | - | chr3.1:14248009-14248028 | MS.gene50876:intron | 30.0% | |
| CATATATCAAACATCTTGCT+GGG | - | chr3.1:14245850-14245869 | MS.gene50876:intron | 30.0% | |
| CTTACAAGATCATATCTGAT+AGG | + | chr3.1:14243886-14243905 | None:intergenic | 30.0% | |
| CTTGCATGTAATCTTACAAA+AGG | + | chr3.1:14245921-14245940 | None:intergenic | 30.0% | |
| GAAAATAAGAGAATCATGGT+GGG | + | chr3.1:14246343-14246362 | None:intergenic | 30.0% | |
| GATGTCTAGTTATGAAATAG+TGG | - | chr3.1:14244268-14244287 | MS.gene50876:intron | 30.0% | |
| TAAAATGCATGTAAGATAGC+TGG | - | chr3.1:14246253-14246272 | MS.gene50876:CDS | 30.0% | |
| TAAGAAACACTTGAAGAACT+TGG | - | chr3.1:14248057-14248076 | MS.gene50876:intron | 30.0% | |
| TAATCAACCACAATATCCAT+CGG | + | chr3.1:14245134-14245153 | None:intergenic | 30.0% | |
| TAATGTGAAGTTCTGTTAAG+TGG | - | chr3.1:14244326-14244345 | MS.gene50876:intron | 30.0% | |
| TCAAATCCAAAAATCGATGT+CGG | - | chr3.1:14248088-14248107 | MS.gene50876:intron | 30.0% | |
| TGAAAATAAGAGAATCATGG+TGG | + | chr3.1:14246344-14246363 | None:intergenic | 30.0% | |
| TGGTGTGATTGTCATATTTA+GGG | - | chr3.1:14244445-14244464 | MS.gene50876:intron | 30.0% | |
| TGTCGTGATTGTCATAATTA+GGG | - | chr3.1:14244587-14244606 | MS.gene50876:intron | 30.0% | |
| TTCAATGCTTCTAATATTGC+AGG | - | chr3.1:14245434-14245453 | MS.gene50876:intron | 30.0% | |
| TTGCCTTGATGTCTAATAAT+GGG | - | chr3.1:14247885-14247904 | MS.gene50876:intron | 30.0% | |
| ! | GTTTTCAATTTTCACCTTGT+TGG | - | chr3.1:14248310-14248329 | MS.gene50876:CDS | 30.0% |
| ! | TTGATGTCTAATAATGGGAT+TGG | - | chr3.1:14247890-14247909 | MS.gene50876:intron | 30.0% |
| !! | GGAAATAAAAAGTGTTCTTC+TGG | - | chr3.1:14246428-14246447 | MS.gene50876:CDS | 30.0% |
| !! | TGCATTTTGTTGTAGTTGTT+AGG | - | chr3.1:14244234-14244253 | MS.gene50876:intron | 30.0% |
| !! | TTCTTAGCAGCTTTTTGAAA+TGG | + | chr3.1:14247953-14247972 | None:intergenic | 30.0% |
| !! | TTGTTTGTTATCAGTTATCC+TGG | - | chr3.1:14247706-14247725 | MS.gene50876:intron | 30.0% |
| !!! | TCATAGCTAGGGTTTTAAAA+TGG | - | chr3.1:14244406-14244425 | MS.gene50876:intron | 30.0% |
| AAACGTAAAGTTGTAGAAGG+AGG | - | chr3.1:14248226-14248245 | MS.gene50876:CDS | 35.0% | |
| AAAGAACTAGAAGCCAAACT+TGG | - | chr3.1:14244920-14244939 | MS.gene50876:intron | 35.0% | |
| AACCTACAAGTCACAAAAAG+TGG | + | chr3.1:14247867-14247886 | None:intergenic | 35.0% | |
| AAGAACTAGAAGCCAAACTT+GGG | - | chr3.1:14244921-14244940 | MS.gene50876:intron | 35.0% | |
| AAGACAAAGGCTATAAATGG+AGG | - | chr3.1:14246456-14246475 | MS.gene50876:CDS | 35.0% | |
| AATCAGGTCTCCATAATTCA+GGG | - | chr3.1:14247063-14247082 | MS.gene50876:intron | 35.0% | |
| AATGTGCACATTATGCAATG+TGG | - | chr3.1:14248270-14248289 | MS.gene50876:CDS | 35.0% | |
| ACATAATGCACACACTTGTA+TGG | - | chr3.1:14246005-14246024 | MS.gene50876:intron | 35.0% | |
| ACTCAGAAACATTCCACTAA+TGG | + | chr3.1:14247841-14247860 | None:intergenic | 35.0% | |
| ACTGACACAAGTAGTATACA+AGG | - | chr3.1:14245723-14245742 | MS.gene50876:intron | 35.0% | |
| AGAACCATGAACAAGAGAAT+AGG | + | chr3.1:14246122-14246141 | None:intergenic | 35.0% | |
| AGACAAAGGCTATAAATGGA+GGG | - | chr3.1:14246457-14246476 | MS.gene50876:CDS | 35.0% | |
| AGTTTATGGCAATGAGACTA+CGG | - | chr3.1:14245533-14245552 | MS.gene50876:intron | 35.0% | |
| ATACAAGGACAAGCGTTAAT+TGG | - | chr3.1:14245738-14245757 | MS.gene50876:intron | 35.0% | |
| ATCCATTGCGAAAAAGTTAC+TGG | - | chr3.1:14246407-14246426 | MS.gene50876:CDS | 35.0% | |
| ATCCTTACTACATTGTAGCT+AGG | + | chr3.1:14246622-14246641 | None:intergenic | 35.0% | |
| CCGCAACAAATACTTTAATC+GGG | - | chr3.1:14248134-14248153 | MS.gene50876:intron | 35.0% | |
| CTTCGAAATTCTGTACTTCT+GGG | - | chr3.1:14247413-14247432 | MS.gene50876:intron | 35.0% | |
| GAAACACAAGAAGAATTTGC+AGG | - | chr3.1:14245659-14245678 | MS.gene50876:intron | 35.0% | |
| GAAGATGAATGATGATAGTC+AGG | - | chr3.1:14245251-14245270 | MS.gene50876:intron | 35.0% | |
| GCAAGATTAATTGTAACAGC+AGG | - | chr3.1:14248008-14248027 | MS.gene50876:intron | 35.0% | |
| GCATATATCAAACATCTTGC+TGG | - | chr3.1:14245849-14245868 | MS.gene50876:intron | 35.0% | |
| GCTATCCATATTGTCCTATT+CGG | + | chr3.1:14244894-14244913 | None:intergenic | 35.0% | |
| GGGTTTAGCTAATTAACTCT+AGG | - | chr3.1:14246197-14246216 | MS.gene50876:CDS | 35.0% | |
| GGTGAAAATTGAAAACTGTC+TGG | + | chr3.1:14248306-14248325 | None:intergenic | 35.0% | |
| GTGGTGTGATTGTCATATTT+AGG | - | chr3.1:14244444-14244463 | MS.gene50876:intron | 35.0% | |
| GTTCTTCAAGTGTTTCTTAC+CGG | + | chr3.1:14248056-14248075 | None:intergenic | 35.0% | |
| GTTGCCTTGATGTCTAATAA+TGG | - | chr3.1:14247884-14247903 | MS.gene50876:intron | 35.0% | |
| TAAATACGAGGAACGTAACA+CGG | - | chr3.1:14246681-14246700 | MS.gene50876:intron | 35.0% | |
| TAATCAGGTCTCCATAATTC+AGG | - | chr3.1:14247062-14247081 | MS.gene50876:intron | 35.0% | |
| TATCTGATAGGTTCAGATTG+TGG | + | chr3.1:14243874-14243893 | None:intergenic | 35.0% | |
| TCCGCAATTTGACTATGAAA+TGG | - | chr3.1:14246529-14246548 | MS.gene50876:CDS | 35.0% | |
| TCGTATTTACGTTCATTCAC+CGG | + | chr3.1:14246670-14246689 | None:intergenic | 35.0% | |
| TCTTATGAAAGTCACATAGC+TGG | - | chr3.1:14245633-14245652 | MS.gene50876:intron | 35.0% | |
| TCTTCGAAATTCTGTACTTC+TGG | - | chr3.1:14247412-14247431 | MS.gene50876:intron | 35.0% | |
| TGAAAAACGGCAAAAAACAG+AGG | - | chr3.1:14246795-14246814 | MS.gene50876:intron | 35.0% | |
| TGATCTTTCTTGAAAGCTGT+AGG | - | chr3.1:14247232-14247251 | MS.gene50876:intron | 35.0% | |
| TGTACCTATTCTCTTGTTCA+TGG | - | chr3.1:14246115-14246134 | MS.gene50876:intron | 35.0% | |
| TGTCGTGATTGTCATGATTA+GGG | - | chr3.1:14244541-14244560 | MS.gene50876:intron | 35.0% | |
| TGTTGTTGCTGGAAATTGTA+GGG | + | chr3.1:14243712-14243731 | None:intergenic | 35.0% | |
| TTATCTTAATTGGACCCACA+AGG | - | chr3.1:14246157-14246176 | MS.gene50876:intron | 35.0% | |
| TTCCTGTATGGCTGTATATA+AGG | + | chr3.1:14247587-14247606 | None:intergenic | 35.0% | |
| ! | AGTAGAAGGAGTTGATTACA+TGG | - | chr3.1:14247005-14247024 | MS.gene50876:intron | 35.0% |
| ! | CAAATAGTGGCTTTTGTTAG+TGG | - | chr3.1:14244828-14244847 | MS.gene50876:intron | 35.0% |
| ! | CCCGATTAAAGTATTTGTTG+CGG | + | chr3.1:14248137-14248156 | None:intergenic | 35.0% |
| ! | GATTAAAGTATTTGTTGCGG+TGG | + | chr3.1:14248134-14248153 | None:intergenic | 35.0% |
| ! | TTATGTTATGTCATTTGGGG+TGG | - | chr3.1:14244128-14244147 | MS.gene50876:CDS | 35.0% |
| ! | TTGTTGTTGCTGGAAATTGT+AGG | + | chr3.1:14243713-14243732 | None:intergenic | 35.0% |
| ! | TTTTACCATATTGAGCTGCA+AGG | - | chr3.1:14247808-14247827 | MS.gene50876:intron | 35.0% |
| ! | TTTTTCGCAATGGATGAGTA+AGG | + | chr3.1:14246402-14246421 | None:intergenic | 35.0% |
| !!! | CTATAAATGGAGGGCATTTT+GGG | - | chr3.1:14246466-14246485 | MS.gene50876:CDS | 35.0% |
| !!! | CTTCTTTGGTTTTGGTTGAT+CGG | + | chr3.1:14248179-14248198 | None:intergenic | 35.0% |
| !!! | TTCCAGTAACTTTTTCGCAA+TGG | + | chr3.1:14246412-14246431 | None:intergenic | 35.0% |
| AACACAACCCTAAGCTCATT+TGG | + | chr3.1:14246496-14246515 | None:intergenic | 40.0% | |
| AACACCGTTACGCTTGAATT+CGG | + | chr3.1:14247927-14247946 | None:intergenic | 40.0% | |
| AAGGAAAGATAGGATCACTG+TGG | - | chr3.1:14246176-14246195 | MS.gene50876:CDS | 40.0% | |
| AAGGATCGAGATCATACGTA+AGG | - | chr3.1:14246636-14246655 | MS.gene50876:intron | 40.0% | |
| AAGTTCTGTTAAGTGGGTGT+TGG | - | chr3.1:14244333-14244352 | MS.gene50876:intron | 40.0% | |
| AGAACTAGAAGCCAAACTTG+GGG | - | chr3.1:14244922-14244941 | MS.gene50876:intron | 40.0% | |
| AGAAGATACTGCTCCAAAAG+GGG | + | chr3.1:14247166-14247185 | None:intergenic | 40.0% | |
| AGCCTAGCTACAATGTAGTA+AGG | - | chr3.1:14246617-14246636 | MS.gene50876:intron | 40.0% | |
| AGGAAAGATAGGATCACTGT+GGG | - | chr3.1:14246177-14246196 | MS.gene50876:CDS | 40.0% | |
| AGTGATCCTATCTTTCCTTG+TGG | + | chr3.1:14246175-14246194 | None:intergenic | 40.0% | |
| ATCGAGATCATACGTAAGGT+CGG | - | chr3.1:14246640-14246659 | MS.gene50876:intron | 40.0% | |
| ATGGAATGATACCGTGATTG+TGG | - | chr3.1:14244425-14244444 | MS.gene50876:intron | 40.0% | |
| ATTGCCGAATTCAAGCGTAA+CGG | - | chr3.1:14247920-14247939 | MS.gene50876:intron | 40.0% | |
| CAACACCGAATAGGACAATA+TGG | - | chr3.1:14244886-14244905 | MS.gene50876:intron | 40.0% | |
| CACTTCACATCTCAAAGCTT+TGG | + | chr3.1:14245586-14245605 | None:intergenic | 40.0% | |
| CAGAAGATACTGCTCCAAAA+GGG | + | chr3.1:14247167-14247186 | None:intergenic | 40.0% | |
| CGATCAACCAAAACCAAAGA+AGG | - | chr3.1:14248177-14248196 | MS.gene50876:CDS | 40.0% | |
| CTGTCGTGATTGTCATGATT+AGG | - | chr3.1:14244540-14244559 | MS.gene50876:intron | 40.0% | |
| CTTCTAATATTGCAGGCTGT+TGG | - | chr3.1:14245441-14245460 | MS.gene50876:intron | 40.0% | |
| GACCTTATATACAGCCATAC+AGG | - | chr3.1:14247582-14247601 | MS.gene50876:intron | 40.0% | |
| GAGCAACTTGGGAAAAATGT+AGG | + | chr3.1:14247775-14247794 | None:intergenic | 40.0% | |
| GAGTGCTATCATTTCCTGTA+TGG | + | chr3.1:14247599-14247618 | None:intergenic | 40.0% | |
| GATCGAAAACTATGATGCTG+TGG | + | chr3.1:14244644-14244663 | None:intergenic | 40.0% | |
| GGTGAATGAACGTAAATACG+AGG | - | chr3.1:14246669-14246688 | MS.gene50876:intron | 40.0% | |
| GTCTCATTGCCATAAACTTG+TGG | + | chr3.1:14245531-14245550 | None:intergenic | 40.0% | |
| GTGATCCTATCTTTCCTTGT+GGG | + | chr3.1:14246174-14246193 | None:intergenic | 40.0% | |
| GTTAATGATTGCCCCAAGTT+TGG | + | chr3.1:14244936-14244955 | None:intergenic | 40.0% | |
| TAGCTAGGCTCTACTGAAAT+CGG | + | chr3.1:14246607-14246626 | None:intergenic | 40.0% | |
| TAGCTGGTTATGTGCATGTT+TGG | - | chr3.1:14246269-14246288 | MS.gene50876:CDS | 40.0% | |
| TATACCTCTGTAGTTAGCAG+AGG | + | chr3.1:14246968-14246987 | None:intergenic | 40.0% | |
| TCAGAAGATACTGCTCCAAA+AGG | + | chr3.1:14247168-14247187 | None:intergenic | 40.0% | |
| TCATTGCCATAAACTTGTGG+TGG | + | chr3.1:14245528-14245547 | None:intergenic | 40.0% | |
| TGACAATCACACCACAATCA+CGG | + | chr3.1:14244439-14244458 | None:intergenic | 40.0% | |
| TTATGCCTTGCAGCTCAATA+TGG | + | chr3.1:14247816-14247835 | None:intergenic | 40.0% | |
| TTCGCATGAGATGCAATAGT+AGG | + | chr3.1:14245696-14245715 | None:intergenic | 40.0% | |
| ! | AAGCTTTGGTGACTTTGGTT+TGG | + | chr3.1:14245572-14245591 | None:intergenic | 40.0% |
| ! | GAAGCTTCTGACTTTTACTC+TGG | - | chr3.1:14245404-14245423 | MS.gene50876:intron | 40.0% |
| ! | GAGCTTGGTATTGTTGTTGA+GGG | + | chr3.1:14243687-14243706 | None:intergenic | 40.0% |
| ! | GCAGAATCAACCTGTTTCTT+AGG | + | chr3.1:14245786-14245805 | None:intergenic | 40.0% |
| ! | GGGTTTTCCAAATGAGCTTA+GGG | - | chr3.1:14246486-14246505 | MS.gene50876:CDS | 40.0% |
| ! | TAAAGTATTTGTTGCGGTGG+CGG | + | chr3.1:14248131-14248150 | None:intergenic | 40.0% |
| ! | TCAAGTTCTGATGCCTTCTT+TGG | + | chr3.1:14248193-14248212 | None:intergenic | 40.0% |
| ! | TCTCAAAGCTTTGGTGACTT+TGG | + | chr3.1:14245577-14245596 | None:intergenic | 40.0% |
| ! | TCTTCTGGAGATGAAGACAA+AGG | - | chr3.1:14246443-14246462 | MS.gene50876:CDS | 40.0% |
| ! | TGAGCTTGGTATTGTTGTTG+AGG | + | chr3.1:14243688-14243707 | None:intergenic | 40.0% |
| ! | TGGGTTTTCCAAATGAGCTT+AGG | - | chr3.1:14246485-14246504 | MS.gene50876:CDS | 40.0% |
| ! | TTGATAATCTGTTGGTTGGG+CGG | + | chr3.1:14243839-14243858 | None:intergenic | 40.0% |
| !! | AAGCTTGTTGTTGTTGTTGC+TGG | + | chr3.1:14243723-14243742 | None:intergenic | 40.0% |
| !! | GAAACAGGTTGATTCTGCAA+CGG | - | chr3.1:14245788-14245807 | MS.gene50876:intron | 40.0% |
| !! | TCCATCGGTGTTGTCAATAA+CGG | + | chr3.1:14245119-14245138 | None:intergenic | 40.0% |
| !! | TCTGATGCCTTCTTTGGTTT+TGG | + | chr3.1:14248187-14248206 | None:intergenic | 40.0% |
| !! | TTGGTGACTTTGGTTTGGTT+AGG | + | chr3.1:14245567-14245586 | None:intergenic | 40.0% |
| !!! | GACCACTTTTTGTGACTTGT+AGG | - | chr3.1:14247862-14247881 | MS.gene50876:intron | 40.0% |
| !!! | GCTATAAATGGAGGGCATTT+TGG | - | chr3.1:14246465-14246484 | MS.gene50876:CDS | 40.0% |
| AACCGTTGACAACACCGAAT+AGG | - | chr3.1:14244877-14244896 | MS.gene50876:intron | 45.0% | |
| AATGCAACGTTGACCACCAT+GGG | - | chr3.1:14246556-14246575 | MS.gene50876:CDS | 45.0% | |
| ACACGGTTCGTAAGTAGGAT+TGG | - | chr3.1:14246698-14246717 | MS.gene50876:intron | 45.0% | |
| ACAGTGCTTCGACTTTACTC+TGG | + | chr3.1:14246839-14246858 | None:intergenic | 45.0% | |
| ACATGCTGCTATGGTGAAGA+AGG | - | chr3.1:14248339-14248358 | MS.gene50876:CDS | 45.0% | |
| ACATGGCCACCACAAGTTTA+TGG | - | chr3.1:14245519-14245538 | MS.gene50876:intron | 45.0% | |
| ACGTAACACGGTTCGTAAGT+AGG | - | chr3.1:14246693-14246712 | MS.gene50876:intron | 45.0% | |
| AGATCATACAAGTCTGTCGC+AGG | + | chr3.1:14247218-14247237 | None:intergenic | 45.0% | |
| AGATCATACGTAAGGTCGGT+CGG | - | chr3.1:14246644-14246663 | MS.gene50876:intron | 45.0% | |
| AGCTAGGCTCTACTGAAATC+GGG | + | chr3.1:14246606-14246625 | None:intergenic | 45.0% | |
| ATGACTGTGAGTGTTTCACG+TGG | - | chr3.1:14245157-14245176 | MS.gene50876:intron | 45.0% | |
| CGCAATGGATGAGTAAGGTA+AGG | + | chr3.1:14246397-14246416 | None:intergenic | 45.0% | |
| CGCTTGAATTCGGCAATAGA+TGG | + | chr3.1:14247917-14247936 | None:intergenic | 45.0% | |
| CGTGAAACACTCACAGTCAT+AGG | + | chr3.1:14245157-14245176 | None:intergenic | 45.0% | |
| GAATTCAAGCGTAACGGTGT+TGG | - | chr3.1:14247926-14247945 | MS.gene50876:intron | 45.0% | |
| GACAACACCGATGGATATTG+TGG | - | chr3.1:14245124-14245143 | MS.gene50876:intron | 45.0% | |
| GAGGATGAAGTGAAGGATCA+GGG | + | chr3.1:14243759-14243778 | None:intergenic | 45.0% | |
| GCAAGGCATAAAGCCATTAG+TGG | - | chr3.1:14247825-14247844 | MS.gene50876:intron | 45.0% | |
| GCAATCTGAGCCTAAGAAAC+AGG | - | chr3.1:14245773-14245792 | MS.gene50876:intron | 45.0% | |
| GGAAATTGTAGGGTTGAGCT+TGG | + | chr3.1:14243702-14243721 | None:intergenic | 45.0% | |
| TCACCATAGCAGCATGTTTC+TGG | + | chr3.1:14248336-14248355 | None:intergenic | 45.0% | |
| TGGTGTGACTGTCATAGCTA+GGG | - | chr3.1:14244395-14244414 | MS.gene50876:intron | 45.0% | |
| TTGGACCCACAAGGAAAGAT+AGG | - | chr3.1:14246166-14246185 | MS.gene50876:intron | 45.0% | |
| ! | GGTTCGTAAGTAGGATTGGT+AGG | - | chr3.1:14246702-14246721 | MS.gene50876:intron | 45.0% |
| !! | ATGGTGGGTTGCCAAAATCA+CGG | + | chr3.1:14246328-14246347 | None:intergenic | 45.0% |
| !! | ATGTGCATGTTTGGTGTCAC+TGG | - | chr3.1:14246278-14246297 | MS.gene50876:CDS | 45.0% |
| !! | CCATCGGTGTTGTCAATAAC+GGG | + | chr3.1:14245118-14245137 | None:intergenic | 45.0% |
| !! | GTCCTATTCGGTGTTGTCAA+CGG | + | chr3.1:14244882-14244901 | None:intergenic | 45.0% |
| !! | TGTGCATGTTTGGTGTCACT+GGG | - | chr3.1:14246279-14246298 | MS.gene50876:CDS | 45.0% |
| !!! | CTAGTGCCGACATCGATTTT+TGG | + | chr3.1:14248097-14248116 | None:intergenic | 45.0% |
| AATGTCGTGGCGTGTCATAG+CGG | + | chr3.1:14246932-14246951 | None:intergenic | 50.0% | |
| ACAGCCTCTGCTAACTACAG+AGG | - | chr3.1:14246961-14246980 | MS.gene50876:intron | 50.0% | |
| AGTTTGCCTTCTGCGTGGAA+TGG | - | chr3.1:14245495-14245514 | MS.gene50876:intron | 50.0% | |
| ATACTGCTCCAAAAGGGGTC+GGG | + | chr3.1:14247161-14247180 | None:intergenic | 50.0% | |
| ATGTAGTCAGGATCGAGTGC+TGG | + | chr3.1:14246901-14246920 | None:intergenic | 50.0% | |
| CAATGCAACGTTGACCACCA+TGG | - | chr3.1:14246555-14246574 | MS.gene50876:CDS | 50.0% | |
| CATGTACCATTCCACGCAGA+AGG | + | chr3.1:14245504-14245523 | None:intergenic | 50.0% | |
| CCCGTTATTGACAACACCGA+TGG | - | chr3.1:14245115-14245134 | MS.gene50876:intron | 50.0% | |
| CTGCTATGGTGAAGAAGGCA+GGG | - | chr3.1:14248344-14248363 | MS.gene50876:CDS | 50.0% | |
| CTTCTGCGTGGAATGGTACA+TGG | - | chr3.1:14245502-14245521 | MS.gene50876:intron | 50.0% | |
| GATACTGCTCCAAAAGGGGT+CGG | + | chr3.1:14247162-14247181 | None:intergenic | 50.0% | |
| GATCCTTCACTTCATCCTCC+TGG | - | chr3.1:14243760-14243779 | MS.gene50876:CDS | 50.0% | |
| GCGGTAGCTACAATGTAGTC+AGG | + | chr3.1:14246913-14246932 | None:intergenic | 50.0% | |
| GCGGTGTAAAGAGAAACAGG+AGG | + | chr3.1:14243820-14243839 | None:intergenic | 50.0% | |
| GCTAGGCTCTACTGAAATCG+GGG | + | chr3.1:14246605-14246624 | None:intergenic | 50.0% | |
| GGAGGATGAAGTGAAGGATC+AGG | + | chr3.1:14243760-14243779 | None:intergenic | 50.0% | |
| GGCTCAGATTGCTTGACTAC+AGG | + | chr3.1:14245765-14245784 | None:intergenic | 50.0% | |
| GTGGTGTGACTGTCATAGCT+AGG | - | chr3.1:14244394-14244413 | MS.gene50876:intron | 50.0% | |
| TCAAGGTTGCTCAGTCTGCA+TGG | - | chr3.1:14247975-14247994 | MS.gene50876:intron | 50.0% | |
| TCTGTAGTTAGCAGAGGCTG+TGG | + | chr3.1:14246962-14246981 | None:intergenic | 50.0% | |
| TGGCCAGAAACATGCTGCTA+TGG | - | chr3.1:14248330-14248349 | MS.gene50876:CDS | 50.0% | |
| TGGGCGGTGTAAAGAGAAAC+AGG | + | chr3.1:14243823-14243842 | None:intergenic | 50.0% | |
| TGTGGCCACAATCGCAGTAT+CGG | + | chr3.1:14244626-14244645 | None:intergenic | 50.0% | |
| TTCGATCTCAGCTGCAAACG+AGG | - | chr3.1:14244657-14244676 | MS.gene50876:intron | 50.0% | |
| ! | AAACCATTCCCGACCCCTTT+TGG | - | chr3.1:14247150-14247169 | MS.gene50876:intron | 50.0% |
| !! | CAGCATGTTTCTGGCCAACA+AGG | + | chr3.1:14248327-14248346 | None:intergenic | 50.0% |
| !! | GTAAAGTCGAAGCACTGTCG+AGG | - | chr3.1:14246841-14246860 | MS.gene50876:intron | 50.0% |
| !! | TCGGTACCTGGCTTTTCTTG+TGG | + | chr3.1:14248160-14248179 | None:intergenic | 50.0% |
| !!! | GGTTTTGGTTGATCGGTACC+TGG | + | chr3.1:14248172-14248191 | None:intergenic | 50.0% |
| AAGAAGGCAGGGTCAGTCAC+TGG | - | chr3.1:14248355-14248374 | MS.gene50876:CDS | 55.0% | |
| AAGTCTGTCGCAGGTGTGCA+CGG | + | chr3.1:14247209-14247228 | None:intergenic | 55.0% | |
| ATCGGGCCACAAGAAAAGCC+AGG | - | chr3.1:14248151-14248170 | MS.gene50876:intron | 55.0% | |
| ATGGGCCGATACTGCGATTG+TGG | - | chr3.1:14244618-14244637 | MS.gene50876:intron | 55.0% | |
| CACGCAGAAGGCAAACTTGC+AGG | + | chr3.1:14245492-14245511 | None:intergenic | 55.0% | |
| CGAGTGTGAGTGTCTTCACG+TGG | - | chr3.1:14244958-14244977 | MS.gene50876:intron | 55.0% | |
| CGTGAAGACACTCACACTCG+TGG | + | chr3.1:14244958-14244977 | None:intergenic | 55.0% | |
| CTGCAAGTTTGCCTTCTGCG+TGG | - | chr3.1:14245490-14245509 | MS.gene50876:intron | 55.0% | |
| CTGTGGCGGCTATAATGTCG+TGG | + | chr3.1:14246945-14246964 | None:intergenic | 55.0% | |
| GAAGGAGGAGCTGCAGTTGA+TGG | - | chr3.1:14248241-14248260 | MS.gene50876:CDS | 55.0% | |
| GCTGCTATGGTGAAGAAGGC+AGG | - | chr3.1:14248343-14248362 | MS.gene50876:CDS | 55.0% | |
| GTAGTTAGCAGAGGCTGTGG+CGG | + | chr3.1:14246959-14246978 | None:intergenic | 55.0% | |
| GTGCCAGGAGGATGAAGTGA+AGG | + | chr3.1:14243766-14243785 | None:intergenic | 55.0% | |
| TTTGCAAGTGGGTCAGTGCC+AGG | + | chr3.1:14243781-14243800 | None:intergenic | 55.0% | |
| ! | AGTATTTGTTGCGGTGGCGG+TGG | + | chr3.1:14248128-14248147 | None:intergenic | 55.0% |
| ! | TCAGCGAGACGCCGTGATTT+TGG | - | chr3.1:14246314-14246333 | MS.gene50876:CDS | 55.0% |
| ! | TTTTGACGTAGCGCCCATGG+TGG | + | chr3.1:14246572-14246591 | None:intergenic | 55.0% |
| !! | AAGCACTGTCGAGGTGCTGT+GGG | - | chr3.1:14246850-14246869 | MS.gene50876:intron | 55.0% |
| !! | AGGATCGAGTGCTGGCTTGT+AGG | + | chr3.1:14246893-14246912 | None:intergenic | 55.0% |
| !! | GCATTTTGACGTAGCGCCCA+TGG | + | chr3.1:14246575-14246594 | None:intergenic | 55.0% |
| CATACGTAAGGTCGGTCGGC+CGG | - | chr3.1:14246648-14246667 | MS.gene50876:intron | 60.0% | |
| GCTCCAAAAGGGGTCGGGAA+TGG | + | chr3.1:14247156-14247175 | None:intergenic | 60.0% | |
| ! | TGGGAGAAAGCACGCTGCTC+AGG | - | chr3.1:14245869-14245888 | MS.gene50876:intron | 60.0% |
| !! | AGCACTGTCGAGGTGCTGTG+GGG | - | chr3.1:14246851-14246870 | MS.gene50876:intron | 60.0% |
| !! | GAAGCACTGTCGAGGTGCTG+TGG | - | chr3.1:14246849-14246868 | MS.gene50876:intron | 60.0% |
| GCAAGTGGGTCAGTGCCAGG+AGG | + | chr3.1:14243778-14243797 | None:intergenic | 65.0% | |
| ! | TGTTGCGGTGGCGGTGGAAG+TGG | + | chr3.1:14248122-14248141 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 14243679 | 14248381 | 14243679 | ID=MS.gene50876 |
| chr3.1 | mRNA | 14243679 | 14248381 | 14243679 | ID=MS.gene50876.t1;Parent=MS.gene50876 |
| chr3.1 | exon | 14248160 | 14248381 | 14248160 | ID=MS.gene50876.t1.exon1;Parent=MS.gene50876.t1 |
| chr3.1 | CDS | 14248160 | 14248381 | 14248160 | ID=cds.MS.gene50876.t1;Parent=MS.gene50876.t1 |
| chr3.1 | exon | 14246170 | 14246604 | 14246170 | ID=MS.gene50876.t1.exon2;Parent=MS.gene50876.t1 |
| chr3.1 | CDS | 14246170 | 14246604 | 14246170 | ID=cds.MS.gene50876.t1;Parent=MS.gene50876.t1 |
| chr3.1 | exon | 14243679 | 14244176 | 14243679 | ID=MS.gene50876.t1.exon3;Parent=MS.gene50876.t1 |
| chr3.1 | CDS | 14243679 | 14244176 | 14243679 | ID=cds.MS.gene50876.t1;Parent=MS.gene50876.t1 |
| Gene Sequence |
| Protein sequence |
