Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51229.t1 | XP_003624081.1 | 90.4 | 314 | 30 | 0 | 1 | 314 | 1 | 314 | 4.10E-156 | 560.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51229.t1 | O04609 | 46.3 | 315 | 119 | 9 | 1 | 306 | 1 | 274 | 1.3e-54 | 214.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51229.t1 | G7L6P2 | 90.4 | 314 | 30 | 0 | 1 | 314 | 1 | 314 | 2.9e-156 | 560.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene51229.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51229.t1 | MTR_7g079040 | 95.860 | 314 | 13 | 0 | 1 | 314 | 1 | 314 | 0.0 | 559 |
MS.gene51229.t1 | MTR_8g028565 | 53.392 | 339 | 125 | 6 | 1 | 312 | 1 | 333 | 1.40e-89 | 271 |
MS.gene51229.t1 | MTR_2g032030 | 49.000 | 200 | 72 | 6 | 135 | 306 | 238 | 435 | 3.14e-48 | 169 |
MS.gene51229.t1 | MTR_2g032030 | 40.625 | 256 | 115 | 7 | 69 | 288 | 159 | 413 | 7.97e-47 | 164 |
MS.gene51229.t1 | MTR_1g099600 | 66.667 | 111 | 35 | 2 | 132 | 240 | 162 | 272 | 3.76e-45 | 156 |
MS.gene51229.t1 | MTR_8g098945 | 41.048 | 229 | 93 | 7 | 4 | 226 | 9 | 201 | 6.95e-40 | 141 |
MS.gene51229.t1 | MTR_2g016770 | 60.440 | 91 | 30 | 1 | 134 | 218 | 9 | 99 | 1.74e-33 | 123 |
MS.gene51229.t1 | MTR_7g109600 | 49.635 | 137 | 53 | 3 | 134 | 261 | 24 | 153 | 3.69e-33 | 124 |
MS.gene51229.t1 | MTR_2g016770 | 61.364 | 88 | 28 | 1 | 137 | 218 | 4 | 91 | 1.17e-32 | 120 |
MS.gene51229.t1 | MTR_8g087000 | 49.587 | 121 | 40 | 2 | 135 | 243 | 45 | 156 | 5.92e-32 | 120 |
MS.gene51229.t1 | MTR_2g083870 | 58.947 | 95 | 28 | 1 | 135 | 218 | 50 | 144 | 2.56e-31 | 119 |
MS.gene51229.t1 | MTR_8g087000 | 49.580 | 119 | 39 | 2 | 137 | 243 | 48 | 157 | 3.78e-31 | 117 |
MS.gene51229.t1 | MTR_1g009613 | 62.195 | 82 | 26 | 2 | 135 | 211 | 238 | 319 | 8.17e-29 | 114 |
MS.gene51229.t1 | MTR_4g127040 | 49.593 | 123 | 41 | 3 | 102 | 211 | 188 | 302 | 8.73e-29 | 113 |
MS.gene51229.t1 | MTR_5g016610 | 60.241 | 83 | 28 | 1 | 134 | 211 | 174 | 256 | 2.81e-27 | 108 |
MS.gene51229.t1 | MTR_2g024380 | 46.729 | 107 | 56 | 1 | 122 | 227 | 219 | 325 | 1.81e-26 | 109 |
MS.gene51229.t1 | MTR_4g094908 | 60.976 | 82 | 27 | 2 | 135 | 211 | 242 | 323 | 2.22e-26 | 107 |
MS.gene51229.t1 | MTR_1g070455 | 57.500 | 80 | 29 | 1 | 137 | 211 | 271 | 350 | 4.19e-24 | 101 |
MS.gene51229.t1 | MTR_2g024350 | 54.430 | 79 | 35 | 1 | 150 | 227 | 4 | 82 | 1.06e-23 | 97.4 |
MS.gene51229.t1 | MTR_0117s0040 | 42.202 | 109 | 57 | 2 | 108 | 211 | 24 | 131 | 3.43e-23 | 96.7 |
MS.gene51229.t1 | MTR_3g108960 | 43.478 | 115 | 53 | 4 | 117 | 219 | 266 | 380 | 6.50e-23 | 98.6 |
MS.gene51229.t1 | MTR_8g067635 | 46.602 | 103 | 47 | 2 | 130 | 224 | 318 | 420 | 1.14e-22 | 99.0 |
MS.gene51229.t1 | MTR_8g067650 | 46.602 | 103 | 47 | 2 | 130 | 224 | 308 | 410 | 4.99e-22 | 97.1 |
MS.gene51229.t1 | MTR_8g069935 | 40.323 | 124 | 61 | 3 | 133 | 255 | 310 | 421 | 8.31e-22 | 95.9 |
MS.gene51229.t1 | MTR_6g053200 | 45.977 | 87 | 47 | 0 | 131 | 217 | 307 | 393 | 1.70e-20 | 92.4 |
MS.gene51229.t1 | MTR_4g094588 | 59.016 | 61 | 24 | 1 | 155 | 215 | 179 | 238 | 9.60e-19 | 85.9 |
MS.gene51229.t1 | MTR_7g110720 | 52.055 | 73 | 35 | 0 | 152 | 224 | 187 | 259 | 3.09e-18 | 85.1 |
MS.gene51229.t1 | MTR_7g110720 | 52.055 | 73 | 35 | 0 | 152 | 224 | 214 | 286 | 3.21e-18 | 85.5 |
MS.gene51229.t1 | MTR_7g109800 | 48.148 | 81 | 39 | 2 | 155 | 235 | 146 | 223 | 4.26e-18 | 83.6 |
MS.gene51229.t1 | MTR_7g011820 | 43.564 | 101 | 55 | 2 | 132 | 231 | 387 | 486 | 4.32e-18 | 85.1 |
MS.gene51229.t1 | MTR_7g011820 | 29.078 | 141 | 82 | 4 | 85 | 214 | 153 | 286 | 9.43e-11 | 63.2 |
MS.gene51229.t1 | MTR_1g086790 | 41.176 | 102 | 49 | 4 | 130 | 222 | 127 | 226 | 6.31e-18 | 83.6 |
MS.gene51229.t1 | MTR_5g042920 | 42.342 | 111 | 60 | 3 | 110 | 217 | 273 | 382 | 8.07e-18 | 84.0 |
MS.gene51229.t1 | MTR_5g042920 | 32.653 | 147 | 71 | 5 | 87 | 214 | 72 | 209 | 7.12e-11 | 63.2 |
MS.gene51229.t1 | MTR_7g100510 | 45.918 | 98 | 36 | 3 | 133 | 214 | 324 | 420 | 2.47e-17 | 82.8 |
MS.gene51229.t1 | MTR_7g100510 | 45.833 | 72 | 37 | 2 | 153 | 224 | 188 | 257 | 1.07e-12 | 68.9 |
MS.gene51229.t1 | MTR_2g023930 | 54.688 | 64 | 29 | 0 | 151 | 214 | 302 | 365 | 2.68e-17 | 82.8 |
MS.gene51229.t1 | MTR_5g091390 | 54.098 | 61 | 27 | 1 | 155 | 215 | 158 | 217 | 2.93e-17 | 81.3 |
MS.gene51229.t1 | MTR_3g090860 | 34.177 | 158 | 95 | 4 | 155 | 310 | 134 | 284 | 6.65e-17 | 80.9 |
MS.gene51229.t1 | MTR_4g082580 | 46.154 | 91 | 46 | 3 | 129 | 217 | 251 | 340 | 1.08e-16 | 80.5 |
MS.gene51229.t1 | MTR_4g082580 | 41.333 | 75 | 43 | 1 | 140 | 214 | 131 | 204 | 7.79e-12 | 65.9 |
MS.gene51229.t1 | MTR_4g049760 | 48.000 | 75 | 39 | 0 | 150 | 224 | 286 | 360 | 1.78e-16 | 80.5 |
MS.gene51229.t1 | MTR_3g056100 | 42.157 | 102 | 45 | 3 | 131 | 219 | 379 | 479 | 1.87e-16 | 80.5 |
MS.gene51229.t1 | MTR_3g056100 | 42.157 | 102 | 45 | 3 | 131 | 219 | 366 | 466 | 1.91e-16 | 80.5 |
MS.gene51229.t1 | MTR_3g056100 | 42.157 | 102 | 45 | 3 | 131 | 219 | 235 | 335 | 2.23e-16 | 80.1 |
MS.gene51229.t1 | MTR_3g056100 | 42.157 | 102 | 45 | 3 | 131 | 219 | 222 | 322 | 2.26e-16 | 79.7 |
MS.gene51229.t1 | MTR_7g009730 | 28.866 | 194 | 115 | 4 | 49 | 224 | 101 | 289 | 4.76e-16 | 79.3 |
MS.gene51229.t1 | MTR_4g049790 | 45.333 | 75 | 41 | 0 | 150 | 224 | 308 | 382 | 7.10e-16 | 78.6 |
MS.gene51229.t1 | MTR_3g053330 | 44.595 | 74 | 41 | 0 | 151 | 224 | 248 | 321 | 7.81e-16 | 78.6 |
MS.gene51229.t1 | MTR_5g094430 | 38.739 | 111 | 48 | 4 | 131 | 222 | 213 | 322 | 8.19e-16 | 78.2 |
MS.gene51229.t1 | MTR_5g094430 | 38.739 | 111 | 48 | 4 | 131 | 222 | 191 | 300 | 8.82e-16 | 77.8 |
MS.gene51229.t1 | MTR_4g094412 | 53.226 | 62 | 29 | 0 | 154 | 215 | 243 | 304 | 9.37e-16 | 78.2 |
MS.gene51229.t1 | MTR_7g109600 | 47.778 | 90 | 36 | 4 | 174 | 261 | 7 | 87 | 9.37e-16 | 75.1 |
MS.gene51229.t1 | MTR_4g094412 | 56.140 | 57 | 25 | 0 | 159 | 215 | 239 | 295 | 9.80e-16 | 78.2 |
MS.gene51229.t1 | MTR_5g094430 | 38.739 | 111 | 48 | 4 | 131 | 222 | 325 | 434 | 9.94e-16 | 78.2 |
MS.gene51229.t1 | MTR_4g007060 | 43.243 | 74 | 42 | 0 | 152 | 225 | 126 | 199 | 2.15e-15 | 75.5 |
MS.gene51229.t1 | MTR_4g132430 | 50.794 | 63 | 31 | 0 | 152 | 214 | 125 | 187 | 2.41e-15 | 76.3 |
MS.gene51229.t1 | MTR_5g043880 | 56.140 | 57 | 24 | 1 | 155 | 211 | 125 | 180 | 2.48e-15 | 75.5 |
MS.gene51229.t1 | MTR_7g062220 | 36.000 | 150 | 82 | 5 | 152 | 300 | 122 | 258 | 2.66e-15 | 75.9 |
MS.gene51229.t1 | MTR_4g007060 | 43.243 | 74 | 42 | 0 | 152 | 225 | 160 | 233 | 2.73e-15 | 75.9 |
MS.gene51229.t1 | MTR_4g132430 | 50.794 | 63 | 31 | 0 | 152 | 214 | 259 | 321 | 3.05e-15 | 76.6 |
MS.gene51229.t1 | MTR_7g117200 | 43.299 | 97 | 42 | 3 | 131 | 214 | 88 | 184 | 3.31e-15 | 75.5 |
MS.gene51229.t1 | MTR_2g045360 | 50.000 | 70 | 35 | 0 | 155 | 224 | 212 | 281 | 4.84e-15 | 75.9 |
MS.gene51229.t1 | MTR_8g099350 | 42.353 | 85 | 41 | 2 | 133 | 209 | 105 | 189 | 5.12e-15 | 75.5 |
MS.gene51229.t1 | MTR_8g087000 | 50.000 | 70 | 26 | 1 | 174 | 243 | 35 | 95 | 5.29e-15 | 72.4 |
MS.gene51229.t1 | MTR_2g088000 | 42.683 | 82 | 35 | 1 | 133 | 214 | 340 | 409 | 5.64e-15 | 75.9 |
MS.gene51229.t1 | MTR_3g104750 | 41.758 | 91 | 51 | 2 | 123 | 213 | 74 | 162 | 7.08e-15 | 71.6 |
MS.gene51229.t1 | MTR_2g105060 | 43.077 | 65 | 37 | 0 | 152 | 216 | 92 | 156 | 8.68e-15 | 73.2 |
MS.gene51229.t1 | MTR_2g105060 | 43.077 | 65 | 37 | 0 | 152 | 216 | 167 | 231 | 1.04e-14 | 73.9 |
MS.gene51229.t1 | MTR_2g033820 | 47.541 | 61 | 31 | 1 | 155 | 215 | 204 | 263 | 1.37e-14 | 74.3 |
MS.gene51229.t1 | MTR_7g079010 | 39.583 | 96 | 47 | 3 | 125 | 212 | 106 | 198 | 2.91e-14 | 71.2 |
MS.gene51229.t1 | MTR_7g080020 | 35.345 | 116 | 67 | 4 | 105 | 219 | 449 | 557 | 3.64e-14 | 73.9 |
MS.gene51229.t1 | MTR_7g080020 | 42.466 | 73 | 40 | 2 | 142 | 214 | 268 | 338 | 5.42e-11 | 63.9 |
MS.gene51229.t1 | MTR_3g009470 | 49.231 | 65 | 32 | 1 | 155 | 219 | 496 | 559 | 4.05e-14 | 73.6 |
MS.gene51229.t1 | MTR_3g009470 | 50.000 | 62 | 29 | 2 | 153 | 214 | 279 | 338 | 9.74e-12 | 66.2 |
MS.gene51229.t1 | MTR_8g027860 | 28.358 | 201 | 122 | 5 | 114 | 303 | 96 | 285 | 5.78e-14 | 72.0 |
MS.gene51229.t1 | MTR_4g107970 | 41.975 | 81 | 44 | 1 | 134 | 214 | 238 | 315 | 6.20e-14 | 72.8 |
MS.gene51229.t1 | MTR_4g107970 | 41.975 | 81 | 44 | 1 | 134 | 214 | 161 | 238 | 7.65e-14 | 72.4 |
MS.gene51229.t1 | MTR_3g095040 | 44.615 | 65 | 35 | 1 | 152 | 216 | 116 | 179 | 8.07e-14 | 69.7 |
MS.gene51229.t1 | MTR_6g086555 | 51.389 | 72 | 31 | 3 | 150 | 218 | 202 | 272 | 8.46e-14 | 72.0 |
MS.gene51229.t1 | MTR_4g130900 | 48.485 | 66 | 33 | 1 | 152 | 217 | 357 | 421 | 8.93e-14 | 72.4 |
MS.gene51229.t1 | MTR_5g097490 | 43.373 | 83 | 44 | 2 | 152 | 234 | 250 | 329 | 9.93e-14 | 71.6 |
MS.gene51229.t1 | MTR_4g013260 | 51.667 | 60 | 28 | 1 | 155 | 214 | 337 | 395 | 1.20e-13 | 72.0 |
MS.gene51229.t1 | MTR_4g013260 | 45.000 | 60 | 32 | 1 | 155 | 214 | 185 | 243 | 9.96e-11 | 62.8 |
MS.gene51229.t1 | MTR_7g071120 | 34.437 | 151 | 70 | 6 | 109 | 231 | 260 | 409 | 1.22e-13 | 72.0 |
MS.gene51229.t1 | MTR_8g092010 | 47.619 | 63 | 32 | 1 | 152 | 214 | 106 | 167 | 1.25e-13 | 68.9 |
MS.gene51229.t1 | MTR_1g013760 | 47.368 | 57 | 30 | 0 | 155 | 211 | 141 | 197 | 1.27e-13 | 70.5 |
MS.gene51229.t1 | MTR_1g015140 | 51.724 | 58 | 27 | 1 | 155 | 212 | 103 | 159 | 1.48e-13 | 68.2 |
MS.gene51229.t1 | MTR_4g122530 | 44.262 | 61 | 33 | 1 | 155 | 215 | 209 | 268 | 2.58e-13 | 70.5 |
MS.gene51229.t1 | MTR_7g080000 | 47.619 | 63 | 32 | 1 | 155 | 217 | 433 | 494 | 3.52e-13 | 70.9 |
MS.gene51229.t1 | MTR_7g080000 | 49.180 | 61 | 29 | 2 | 155 | 215 | 235 | 293 | 1.23e-11 | 65.9 |
MS.gene51229.t1 | MTR_3g106060 | 40.789 | 76 | 38 | 1 | 143 | 211 | 120 | 195 | 7.70e-13 | 68.2 |
MS.gene51229.t1 | MTR_4g047580 | 42.667 | 75 | 43 | 0 | 150 | 224 | 277 | 351 | 1.19e-12 | 68.9 |
MS.gene51229.t1 | MTR_3g031220 | 45.333 | 75 | 39 | 2 | 155 | 229 | 366 | 438 | 1.25e-12 | 68.9 |
MS.gene51229.t1 | MTR_3g031220 | 31.250 | 160 | 99 | 5 | 64 | 215 | 101 | 257 | 6.18e-11 | 63.5 |
MS.gene51229.t1 | MTR_7g028415 | 44.262 | 61 | 33 | 1 | 152 | 212 | 91 | 150 | 2.23e-12 | 65.1 |
MS.gene51229.t1 | MTR_7g028710 | 44.262 | 61 | 33 | 1 | 152 | 212 | 91 | 150 | 2.23e-12 | 65.1 |
MS.gene51229.t1 | MTR_5g074400 | 47.692 | 65 | 33 | 1 | 155 | 219 | 421 | 484 | 2.61e-12 | 67.8 |
MS.gene51229.t1 | MTR_1g078260 | 50.794 | 63 | 29 | 2 | 150 | 211 | 243 | 304 | 2.75e-12 | 67.8 |
MS.gene51229.t1 | MTR_8g092140 | 44.118 | 68 | 31 | 2 | 150 | 211 | 150 | 216 | 6.60e-12 | 64.7 |
MS.gene51229.t1 | MTR_3g095080 | 46.053 | 76 | 37 | 3 | 155 | 230 | 169 | 240 | 7.34e-12 | 64.7 |
MS.gene51229.t1 | MTR_3g095080 | 46.053 | 76 | 37 | 3 | 155 | 230 | 145 | 216 | 7.36e-12 | 64.3 |
MS.gene51229.t1 | MTR_3g009470 | 50.000 | 62 | 29 | 2 | 153 | 214 | 279 | 338 | 7.83e-12 | 66.2 |
MS.gene51229.t1 | MTR_8g007270 | 41.573 | 89 | 47 | 3 | 126 | 211 | 124 | 210 | 9.91e-12 | 64.3 |
MS.gene51229.t1 | MTR_1g013790 | 40.625 | 64 | 38 | 0 | 152 | 215 | 99 | 162 | 1.22e-11 | 64.3 |
MS.gene51229.t1 | MTR_3g031220 | 31.250 | 160 | 99 | 5 | 64 | 215 | 101 | 257 | 2.96e-11 | 64.3 |
MS.gene51229.t1 | MTR_5g067680 | 40.449 | 89 | 44 | 3 | 130 | 209 | 171 | 259 | 3.79e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51229.t1 | AT4G01250 | 47.664 | 321 | 106 | 11 | 1 | 306 | 1 | 274 | 5.66e-77 | 238 |
MS.gene51229.t1 | AT4G23550 | 42.126 | 254 | 115 | 6 | 3 | 249 | 8 | 236 | 2.60e-41 | 146 |
MS.gene51229.t1 | AT2G34830 | 68.367 | 98 | 21 | 1 | 135 | 222 | 186 | 283 | 4.81e-41 | 148 |
MS.gene51229.t1 | AT2G34830 | 68.367 | 98 | 21 | 1 | 135 | 222 | 195 | 292 | 6.19e-41 | 148 |
MS.gene51229.t1 | AT1G30650 | 62.617 | 107 | 27 | 2 | 129 | 222 | 179 | 285 | 1.48e-39 | 144 |
MS.gene51229.t1 | AT5G45050 | 59.813 | 107 | 42 | 1 | 117 | 222 | 1114 | 1220 | 8.77e-37 | 140 |
MS.gene51229.t1 | AT5G45050 | 59.813 | 107 | 42 | 1 | 117 | 222 | 1142 | 1248 | 9.88e-37 | 140 |
MS.gene51229.t1 | AT5G45050 | 59.813 | 107 | 42 | 1 | 117 | 222 | 1003 | 1109 | 1.19e-36 | 140 |
MS.gene51229.t1 | AT3G58710 | 51.695 | 118 | 38 | 2 | 129 | 227 | 34 | 151 | 6.06e-35 | 128 |
MS.gene51229.t1 | AT1G29280 | 58.252 | 103 | 27 | 2 | 135 | 226 | 44 | 141 | 1.29e-33 | 124 |
MS.gene51229.t1 | AT3G58710 | 53.571 | 112 | 33 | 2 | 135 | 227 | 41 | 152 | 1.53e-33 | 125 |
MS.gene51229.t1 | AT2G30590 | 58.333 | 84 | 30 | 1 | 134 | 212 | 288 | 371 | 2.60e-27 | 110 |
MS.gene51229.t1 | AT4G24240 | 59.036 | 83 | 29 | 1 | 134 | 211 | 256 | 338 | 1.82e-26 | 107 |
MS.gene51229.t1 | AT4G31550 | 44.628 | 121 | 56 | 2 | 102 | 211 | 182 | 302 | 2.08e-26 | 107 |
MS.gene51229.t1 | AT4G31550 | 56.098 | 82 | 31 | 1 | 135 | 211 | 222 | 303 | 9.65e-26 | 105 |
MS.gene51229.t1 | AT2G23320 | 55.422 | 83 | 32 | 2 | 134 | 211 | 215 | 297 | 5.56e-25 | 103 |
MS.gene51229.t1 | AT2G24570 | 56.098 | 82 | 31 | 1 | 135 | 211 | 219 | 300 | 6.05e-25 | 103 |
MS.gene51229.t1 | AT5G45260 | 50.526 | 95 | 44 | 2 | 133 | 225 | 1188 | 1281 | 1.65e-24 | 105 |
MS.gene51229.t1 | AT3G04670 | 55.422 | 83 | 32 | 1 | 134 | 211 | 237 | 319 | 1.85e-23 | 99.0 |
MS.gene51229.t1 | AT5G28650 | 55.422 | 83 | 32 | 1 | 134 | 211 | 237 | 319 | 2.07e-23 | 99.0 |
MS.gene51229.t1 | AT5G46350 | 52.778 | 72 | 31 | 2 | 155 | 224 | 184 | 254 | 3.39e-19 | 87.0 |
MS.gene51229.t1 | AT4G18170 | 48.780 | 82 | 40 | 2 | 135 | 216 | 154 | 233 | 1.04e-18 | 85.5 |
MS.gene51229.t1 | AT2G37260 | 53.846 | 91 | 35 | 4 | 127 | 211 | 234 | 323 | 1.34e-18 | 85.9 |
MS.gene51229.t1 | AT2G37260 | 53.846 | 91 | 35 | 4 | 127 | 211 | 236 | 325 | 1.42e-18 | 85.5 |
MS.gene51229.t1 | AT2G37260 | 53.846 | 91 | 35 | 4 | 127 | 211 | 316 | 405 | 1.98e-18 | 85.9 |
MS.gene51229.t1 | AT4G04450 | 50.685 | 73 | 36 | 0 | 152 | 224 | 196 | 268 | 7.87e-18 | 84.3 |
MS.gene51229.t1 | AT1G29860 | 55.738 | 61 | 26 | 1 | 155 | 215 | 137 | 196 | 1.02e-17 | 82.4 |
MS.gene51229.t1 | AT4G04450 | 50.685 | 73 | 36 | 0 | 152 | 224 | 290 | 362 | 1.14e-17 | 84.0 |
MS.gene51229.t1 | AT2G04880 | 37.500 | 128 | 68 | 4 | 119 | 240 | 271 | 392 | 1.53e-17 | 83.6 |
MS.gene51229.t1 | AT2G04880 | 37.500 | 128 | 68 | 4 | 119 | 240 | 247 | 368 | 1.79e-17 | 83.2 |
MS.gene51229.t1 | AT1G68150 | 46.053 | 76 | 41 | 0 | 154 | 229 | 235 | 310 | 7.20e-17 | 80.9 |
MS.gene51229.t1 | AT4G22070 | 53.125 | 64 | 30 | 0 | 151 | 214 | 294 | 357 | 8.71e-17 | 81.6 |
MS.gene51229.t1 | AT4G22070 | 53.125 | 64 | 30 | 0 | 151 | 214 | 294 | 357 | 8.71e-17 | 81.6 |
MS.gene51229.t1 | AT4G22070 | 53.125 | 64 | 30 | 0 | 151 | 214 | 294 | 357 | 8.71e-17 | 81.6 |
MS.gene51229.t1 | AT4G22070 | 53.125 | 64 | 30 | 0 | 151 | 214 | 294 | 357 | 8.71e-17 | 81.6 |
MS.gene51229.t1 | AT1G62300 | 53.968 | 63 | 29 | 0 | 152 | 214 | 310 | 372 | 1.02e-16 | 81.3 |
MS.gene51229.t1 | AT1G13960 | 53.968 | 63 | 28 | 1 | 152 | 214 | 254 | 315 | 1.20e-16 | 80.1 |
MS.gene51229.t1 | AT1G13960 | 43.939 | 66 | 35 | 2 | 149 | 214 | 71 | 134 | 5.66e-11 | 63.5 |
MS.gene51229.t1 | AT1G13960 | 53.968 | 63 | 28 | 1 | 152 | 214 | 407 | 468 | 1.71e-16 | 80.5 |
MS.gene51229.t1 | AT1G13960 | 43.939 | 66 | 35 | 2 | 149 | 214 | 224 | 287 | 6.07e-11 | 63.5 |
MS.gene51229.t1 | AT5G49520 | 53.333 | 60 | 27 | 1 | 155 | 214 | 222 | 280 | 3.12e-16 | 79.3 |
MS.gene51229.t1 | AT2G03340 | 50.000 | 68 | 33 | 1 | 152 | 219 | 413 | 479 | 3.77e-16 | 79.3 |
MS.gene51229.t1 | AT3G62340 | 46.988 | 83 | 38 | 2 | 137 | 214 | 96 | 177 | 5.14e-16 | 77.4 |
MS.gene51229.t1 | AT5G26170 | 53.968 | 63 | 27 | 2 | 149 | 211 | 109 | 169 | 7.90e-16 | 74.7 |
MS.gene51229.t1 | AT4G01720 | 54.098 | 61 | 28 | 0 | 154 | 214 | 239 | 299 | 1.51e-15 | 77.8 |
MS.gene51229.t1 | AT5G15130 | 41.111 | 90 | 50 | 1 | 135 | 224 | 211 | 297 | 1.75e-15 | 77.4 |
MS.gene51229.t1 | AT5G15130 | 41.111 | 90 | 50 | 1 | 135 | 224 | 169 | 255 | 1.94e-15 | 77.4 |
MS.gene51229.t1 | AT2G21900 | 49.180 | 61 | 30 | 1 | 155 | 215 | 110 | 169 | 2.27e-15 | 73.9 |
MS.gene51229.t1 | AT2G25000 | 48.333 | 60 | 31 | 0 | 155 | 214 | 104 | 163 | 2.46e-15 | 74.7 |
MS.gene51229.t1 | AT2G25000 | 48.333 | 60 | 31 | 0 | 155 | 214 | 104 | 163 | 2.46e-15 | 74.7 |
MS.gene51229.t1 | AT1G18860 | 43.750 | 80 | 42 | 1 | 135 | 214 | 223 | 299 | 3.12e-15 | 76.6 |
MS.gene51229.t1 | AT2G25000 | 48.333 | 60 | 31 | 0 | 155 | 214 | 126 | 185 | 4.27e-15 | 74.3 |
MS.gene51229.t1 | AT4G26640 | 46.835 | 79 | 36 | 2 | 146 | 219 | 192 | 269 | 4.74e-15 | 75.9 |
MS.gene51229.t1 | AT4G26640 | 46.835 | 79 | 36 | 2 | 146 | 219 | 192 | 269 | 4.74e-15 | 75.9 |
MS.gene51229.t1 | AT4G26640 | 46.835 | 79 | 36 | 2 | 146 | 219 | 192 | 269 | 4.74e-15 | 75.9 |
MS.gene51229.t1 | AT4G26640 | 46.835 | 79 | 36 | 2 | 146 | 219 | 192 | 269 | 4.74e-15 | 75.9 |
MS.gene51229.t1 | AT2G25000 | 48.333 | 60 | 31 | 0 | 155 | 214 | 147 | 206 | 5.75e-15 | 74.3 |
MS.gene51229.t1 | AT4G26640 | 46.835 | 79 | 36 | 2 | 146 | 219 | 296 | 373 | 5.79e-15 | 75.9 |
MS.gene51229.t1 | AT4G26640 | 46.835 | 79 | 36 | 2 | 146 | 219 | 368 | 445 | 5.94e-15 | 75.9 |
MS.gene51229.t1 | AT4G26640 | 46.835 | 79 | 36 | 2 | 146 | 219 | 328 | 405 | 5.95e-15 | 75.9 |
MS.gene51229.t1 | AT2G47260 | 35.238 | 105 | 57 | 3 | 110 | 214 | 140 | 233 | 7.09e-15 | 74.7 |
MS.gene51229.t1 | AT1G80840 | 40.278 | 72 | 43 | 0 | 155 | 226 | 147 | 218 | 1.06e-14 | 73.9 |
MS.gene51229.t1 | AT1G69310 | 52.632 | 57 | 26 | 1 | 155 | 211 | 148 | 203 | 1.19e-14 | 73.6 |
MS.gene51229.t1 | AT1G69310 | 52.632 | 57 | 26 | 1 | 155 | 211 | 148 | 203 | 1.19e-14 | 73.6 |
MS.gene51229.t1 | AT1G69310 | 52.632 | 57 | 26 | 1 | 155 | 211 | 148 | 203 | 1.19e-14 | 73.6 |
MS.gene51229.t1 | AT4G11070 | 44.792 | 96 | 41 | 3 | 131 | 214 | 80 | 175 | 1.31e-14 | 73.6 |
MS.gene51229.t1 | AT4G11070 | 44.792 | 96 | 41 | 3 | 131 | 214 | 112 | 207 | 1.33e-14 | 73.9 |
MS.gene51229.t1 | AT5G07100 | 50.000 | 64 | 31 | 1 | 152 | 215 | 139 | 201 | 1.39e-14 | 72.0 |
MS.gene51229.t1 | AT5G07100 | 45.161 | 62 | 33 | 1 | 153 | 214 | 23 | 83 | 4.42e-11 | 62.0 |
MS.gene51229.t1 | AT5G07100 | 50.000 | 64 | 31 | 1 | 152 | 215 | 139 | 201 | 1.39e-14 | 72.0 |
MS.gene51229.t1 | AT5G07100 | 45.161 | 62 | 33 | 1 | 153 | 214 | 23 | 83 | 4.42e-11 | 62.0 |
MS.gene51229.t1 | AT5G07100 | 50.000 | 64 | 31 | 1 | 152 | 215 | 139 | 201 | 1.39e-14 | 72.0 |
MS.gene51229.t1 | AT5G07100 | 45.161 | 62 | 33 | 1 | 153 | 214 | 23 | 83 | 4.42e-11 | 62.0 |
MS.gene51229.t1 | AT5G07100 | 50.000 | 64 | 31 | 1 | 152 | 215 | 139 | 201 | 1.39e-14 | 72.0 |
MS.gene51229.t1 | AT5G07100 | 45.161 | 62 | 33 | 1 | 153 | 214 | 23 | 83 | 4.42e-11 | 62.0 |
MS.gene51229.t1 | AT3G01080 | 50.794 | 63 | 30 | 1 | 152 | 214 | 342 | 403 | 3.25e-14 | 73.6 |
MS.gene51229.t1 | AT3G01080 | 41.429 | 70 | 39 | 2 | 153 | 222 | 204 | 271 | 8.75e-11 | 63.2 |
MS.gene51229.t1 | AT3G01080 | 50.794 | 63 | 30 | 1 | 152 | 214 | 304 | 365 | 3.74e-14 | 73.2 |
MS.gene51229.t1 | AT5G07100 | 50.000 | 64 | 31 | 1 | 152 | 215 | 232 | 294 | 3.86e-14 | 72.4 |
MS.gene51229.t1 | AT5G07100 | 45.161 | 62 | 33 | 1 | 153 | 214 | 116 | 176 | 8.73e-11 | 62.4 |
MS.gene51229.t1 | AT1G69810 | 45.833 | 72 | 38 | 1 | 154 | 224 | 203 | 274 | 4.74e-14 | 72.8 |
MS.gene51229.t1 | AT4G30935 | 46.970 | 66 | 34 | 1 | 152 | 217 | 329 | 393 | 5.15e-14 | 72.8 |
MS.gene51229.t1 | AT1G69810 | 45.833 | 72 | 38 | 1 | 154 | 224 | 145 | 216 | 6.26e-14 | 72.0 |
MS.gene51229.t1 | AT2G38470 | 46.479 | 71 | 37 | 1 | 155 | 225 | 363 | 432 | 7.02e-14 | 72.8 |
MS.gene51229.t1 | AT4G31800 | 45.000 | 60 | 33 | 0 | 155 | 214 | 112 | 171 | 8.71e-14 | 70.5 |
MS.gene51229.t1 | AT4G31800 | 45.000 | 60 | 33 | 0 | 155 | 214 | 177 | 236 | 1.00e-13 | 71.2 |
MS.gene51229.t1 | AT2G40740 | 32.222 | 180 | 92 | 8 | 64 | 215 | 62 | 239 | 1.47e-13 | 70.5 |
MS.gene51229.t1 | AT2G40740 | 32.222 | 180 | 92 | 8 | 64 | 215 | 71 | 248 | 1.84e-13 | 70.5 |
MS.gene51229.t1 | AT5G56270 | 49.206 | 63 | 31 | 1 | 155 | 217 | 488 | 549 | 1.93e-13 | 71.6 |
MS.gene51229.t1 | AT1G64000 | 40.260 | 77 | 45 | 1 | 150 | 226 | 110 | 185 | 3.08e-13 | 67.8 |
MS.gene51229.t1 | AT2G46400 | 39.316 | 117 | 62 | 4 | 101 | 209 | 46 | 161 | 3.75e-13 | 69.3 |
MS.gene51229.t1 | AT4G26440 | 46.154 | 65 | 34 | 1 | 155 | 219 | 373 | 436 | 6.25e-13 | 69.7 |
MS.gene51229.t1 | AT4G26440 | 41.463 | 82 | 40 | 4 | 144 | 223 | 172 | 247 | 3.21e-11 | 64.7 |
MS.gene51229.t1 | AT4G23810 | 43.434 | 99 | 46 | 4 | 119 | 209 | 119 | 215 | 7.68e-13 | 68.6 |
MS.gene51229.t1 | AT4G39410 | 39.394 | 99 | 55 | 3 | 136 | 230 | 203 | 300 | 8.37e-13 | 68.6 |
MS.gene51229.t1 | AT5G41570 | 40.260 | 77 | 45 | 1 | 150 | 226 | 94 | 169 | 1.09e-12 | 65.9 |
MS.gene51229.t1 | AT2G44745 | 42.045 | 88 | 46 | 3 | 127 | 211 | 116 | 201 | 1.14e-12 | 66.6 |
MS.gene51229.t1 | AT2G30250 | 44.000 | 75 | 36 | 2 | 146 | 215 | 315 | 388 | 1.48e-12 | 68.2 |
MS.gene51229.t1 | AT1G55600 | 44.262 | 61 | 33 | 1 | 154 | 214 | 307 | 366 | 1.60e-12 | 68.6 |
MS.gene51229.t1 | AT3G01970 | 35.802 | 81 | 51 | 1 | 152 | 232 | 63 | 142 | 1.76e-12 | 64.7 |
MS.gene51229.t1 | AT5G13080 | 44.262 | 61 | 33 | 1 | 152 | 212 | 65 | 124 | 1.78e-12 | 64.7 |
MS.gene51229.t1 | AT3G56400 | 34.021 | 97 | 57 | 3 | 127 | 217 | 94 | 189 | 4.04e-12 | 66.2 |
MS.gene51229.t1 | AT2G40750 | 32.609 | 138 | 74 | 4 | 149 | 267 | 146 | 283 | 4.71e-12 | 66.6 |
MS.gene51229.t1 | AT2G46130 | 45.161 | 62 | 33 | 1 | 152 | 213 | 28 | 88 | 1.33e-11 | 61.2 |
MS.gene51229.t1 | AT5G43290 | 45.455 | 77 | 39 | 2 | 152 | 228 | 112 | 185 | 1.50e-11 | 64.3 |
MS.gene51229.t1 | AT5G64810 | 45.763 | 59 | 31 | 1 | 155 | 213 | 111 | 168 | 2.41e-11 | 62.4 |
MS.gene51229.t1 | AT5G24110 | 30.719 | 153 | 92 | 4 | 61 | 209 | 28 | 170 | 5.18e-11 | 63.2 |
MS.gene51229.t1 | AT3G01080 | 41.429 | 70 | 39 | 2 | 153 | 222 | 204 | 271 | 6.50e-11 | 63.2 |
MS.gene51229.t1 | AT5G45050 | 52.542 | 59 | 27 | 1 | 117 | 174 | 1142 | 1200 | 8.01e-11 | 63.9 |
Find 66 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCTTGTGTTTGAGCTAATT+TGG | 0.118717 | 7.3:+28079473 | None:intergenic |
CTGCTATTGCAATTCCTAAT+TGG | 0.183200 | 7.3:-28078632 | MS.gene51229:CDS |
TCAGCTTGAGGTGGTGTTAA+TGG | 0.224988 | 7.3:+28078870 | None:intergenic |
TTTGAGAGTTTAGATGAATT+TGG | 0.226929 | 7.3:-28078675 | MS.gene51229:CDS |
TGTGGCTACTCTTCTATCTT+TGG | 0.243238 | 7.3:-28079672 | MS.gene51229:CDS |
GACGAAGAAGGAGATGAATT+TGG | 0.264657 | 7.3:-28078729 | MS.gene51229:CDS |
GCACTATTAGCCACCCAATT+AGG | 0.288597 | 7.3:+28078618 | None:intergenic |
ATATGGGCATGGAGAAAATA+TGG | 0.288611 | 7.3:-28079186 | MS.gene51229:CDS |
TGCTATTGCAATTCCTAATT+GGG | 0.291536 | 7.3:-28078631 | MS.gene51229:intron |
CACAAGAAGGTTCAGGTTGC+AGG | 0.297705 | 7.3:+28079691 | None:intergenic |
AGAGTCTCTCTTCAGATATA+TGG | 0.305175 | 7.3:-28079203 | MS.gene51229:CDS |
GTAGAGAAAACGGAACATTT+TGG | 0.319898 | 7.3:-28078482 | MS.gene51229:intron |
TCTTGTGTTTGAGCTAATTT+GGG | 0.330263 | 7.3:+28079474 | None:intergenic |
TCTTCACCTCCTGAGGTTGT+AGG | 0.351765 | 7.3:+28078816 | None:intergenic |
GTCAGAAAGTAGAGAAGAAA+AGG | 0.360877 | 7.3:-28078769 | MS.gene51229:CDS |
CAAGAAAGTGACAAAATTTG+AGG | 0.365124 | 7.3:+28079636 | None:intergenic |
ATTGCAATAGCAGAAGAAAA+TGG | 0.365837 | 7.3:+28078642 | None:intergenic |
AGAAAAGGAAGATTCTTTGA+TGG | 0.372979 | 7.3:-28078754 | MS.gene51229:CDS |
GATCTCCATGCGGTGGTTAG+AGG | 0.374060 | 7.3:-28079774 | MS.gene51229:CDS |
CTTTACCTATGGAAGAAGAT+TGG | 0.382515 | 7.3:-28079797 | None:intergenic |
ATGGAGTTTCTAGCTTCAAA+AGG | 0.418901 | 7.3:+28079603 | None:intergenic |
TATAGATGTAGCAGTTCAAA+AGG | 0.420572 | 7.3:-28079023 | MS.gene51229:CDS |
GAGTAGCCACAAGAAGGTTC+AGG | 0.422256 | 7.3:+28079684 | None:intergenic |
TTTACCTATGGAAGAAGATT+GGG | 0.432908 | 7.3:-28079796 | None:intergenic |
TCTTTGTTGGTTTCAGCTTG+AGG | 0.464539 | 7.3:+28078858 | None:intergenic |
TGTGATGATCTTGAAAAGAA+AGG | 0.468032 | 7.3:+28079555 | None:intergenic |
TATGTTACTATGAACATTGT+TGG | 0.470318 | 7.3:+28078960 | None:intergenic |
GAGTCTCTCTTCAGATATAT+GGG | 0.478312 | 7.3:-28079202 | MS.gene51229:CDS |
AAGTTCATGCAACTCTTCAA+TGG | 0.483711 | 7.3:+28079584 | None:intergenic |
AACCTCTTCTTCACCTCCTG+AGG | 0.488504 | 7.3:+28078809 | None:intergenic |
CCCTCTTCTCCTACAACCTC+AGG | 0.495834 | 7.3:-28078825 | MS.gene51229:CDS |
TGTAGGTGTGGTGGTTGAAG+TGG | 0.496240 | 7.3:+28079743 | None:intergenic |
AGCTAATTTGGGTGAAGCAG+AGG | 0.511551 | 7.3:+28079485 | None:intergenic |
GAAGAAGAAACAGAGGATGT+AGG | 0.525651 | 7.3:+28079726 | None:intergenic |
TGGAGTTTCTAGCTTCAAAA+GGG | 0.530845 | 7.3:+28079604 | None:intergenic |
ACAAGAAGGTTCAGGTTGCA+GGG | 0.532171 | 7.3:+28079692 | None:intergenic |
GGAGGAATCTTTGCTGACAA+TGG | 0.535261 | 7.3:-28078461 | MS.gene51229:CDS |
TATGGGCATGGAGAAAATAT+GGG | 0.537903 | 7.3:-28079185 | MS.gene51229:CDS |
AGGTGTGGTGGTTGAAGTGG+TGG | 0.538195 | 7.3:+28079746 | None:intergenic |
TCTGAAGAGAGACTCTCAAC+TGG | 0.540075 | 7.3:+28079210 | None:intergenic |
CCTGAGGTTGTAGGAGAAGA+GGG | 0.546404 | 7.3:+28078825 | None:intergenic |
GGAGAAGTTTGCAAAGAAAG+AGG | 0.551853 | 7.3:+28079531 | None:intergenic |
TCTTTGATGGATGACGAAGA+AGG | 0.562001 | 7.3:-28078741 | MS.gene51229:CDS |
TCCTGAGGTTGTAGGAGAAG+AGG | 0.567164 | 7.3:+28078824 | None:intergenic |
CTGCAACCTGAACCTTCTTG+TGG | 0.572424 | 7.3:-28079690 | MS.gene51229:CDS |
AGAAACAGAGGATGTAGGTG+TGG | 0.573812 | 7.3:+28079731 | None:intergenic |
AGATCCCAATCTTCTTCCAT+AGG | 0.576312 | 7.3:+28079792 | None:intergenic |
AACAGAGGAAGAAGAAACAG+AGG | 0.577059 | 7.3:+28079719 | None:intergenic |
TAAGAGAATGAAGAAAACAA+AGG | 0.578001 | 7.3:+28079510 | None:intergenic |
GAAGAAGAGGTTCAAACTCA+AGG | 0.585892 | 7.3:-28078798 | MS.gene51229:CDS |
ATAGAAGAGTAGCCACAAGA+AGG | 0.596283 | 7.3:+28079678 | None:intergenic |
TAAAAGGGTCACCATATCCA+AGG | 0.597269 | 7.3:-28079152 | MS.gene51229:intron |
TCTCTTCAGATATATGGGCA+TGG | 0.605027 | 7.3:-28079197 | MS.gene51229:CDS |
TTGTTGGTTTCAGCTTGAGG+TGG | 0.614005 | 7.3:+28078861 | None:intergenic |
ACTCTCTTGCTGGTTCAACA+AGG | 0.623552 | 7.3:-28078899 | MS.gene51229:CDS |
ATAGATGTAGCAGTTCAAAA+GGG | 0.629154 | 7.3:-28079022 | MS.gene51229:CDS |
AACAGAGGATGTAGGTGTGG+TGG | 0.629725 | 7.3:+28079734 | None:intergenic |
CAAGAAGGTTCAGGTTGCAG+GGG | 0.629954 | 7.3:+28079693 | None:intergenic |
AACCTCAGGAGGTGAAGAAG+AGG | 0.630119 | 7.3:-28078811 | MS.gene51229:CDS |
AGCAACCTCTAACCACCGCA+TGG | 0.645537 | 7.3:+28079769 | None:intergenic |
GGTTGGTGAGAGAACCACCT+TGG | 0.648538 | 7.3:+28079418 | None:intergenic |
AGTAGTAAACATTCACACCA+AGG | 0.691967 | 7.3:-28079435 | MS.gene51229:CDS |
AGATTGGGATCTCCATGCGG+TGG | 0.697339 | 7.3:-28079781 | MS.gene51229:CDS |
TCTTCTCCTACAACCTCAGG+AGG | 0.702219 | 7.3:-28078822 | MS.gene51229:CDS |
AGTAAACATTCACACCAAGG+TGG | 0.743596 | 7.3:-28079432 | MS.gene51229:CDS |
AGAAGATTGGGATCTCCATG+CGG | 0.744459 | 7.3:-28079784 | MS.gene51229:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAAATTGAATTTTTACCT+TGG | + | chr7.3:28079110-28079129 | None:intergenic | 15.0% |
!!! | AATTTTGTTTTGTGATTTAT+AGG | - | chr7.3:28079190-28079209 | MS.gene51229:CDS | 15.0% |
!!! | ATTTTGTTTTGTGATTTATA+GGG | - | chr7.3:28079191-28079210 | MS.gene51229:CDS | 15.0% |
!!! | TTGCTTTATTTTTTCTTTAT+AGG | - | chr7.3:28078979-28078998 | MS.gene51229:CDS | 15.0% |
!!! | AAGACTTGATTTTTATTACA+TGG | + | chr7.3:28078921-28078940 | None:intergenic | 20.0% |
!!! | AGACTTGATTTTTATTACAT+GGG | + | chr7.3:28078920-28078939 | None:intergenic | 20.0% |
!!! | TTTTGTTTTGTGATTTATAG+GGG | - | chr7.3:28079192-28079211 | MS.gene51229:CDS | 20.0% |
! | TAAGAGAATGAAGAAAACAA+AGG | + | chr7.3:28078735-28078754 | None:intergenic | 25.0% |
! | TATGTTACTATGAACATTGT+TGG | + | chr7.3:28079285-28079304 | None:intergenic | 25.0% |
! | TTTGAGAGTTTAGATGAATT+TGG | - | chr7.3:28079567-28079586 | MS.gene51229:CDS | 25.0% |
!! | ATTTACCTTCTTTTTGATCT+TGG | + | chr7.3:28078849-28078868 | None:intergenic | 25.0% |
!! | TTGAATTTTTACCTTGGATA+TGG | + | chr7.3:28079104-28079123 | None:intergenic | 25.0% |
!! | TTTACCTTCTTTTTGATCTT+GGG | + | chr7.3:28078848-28078867 | None:intergenic | 25.0% |
!!! | CTTTTTGTTTGTAGAGAAAA+CGG | - | chr7.3:28079750-28079769 | MS.gene51229:CDS | 25.0% |
AGAAAAGGAAGATTCTTTGA+TGG | - | chr7.3:28079488-28079507 | MS.gene51229:CDS | 30.0% | |
ATAGATGTAGCAGTTCAAAA+GGG | - | chr7.3:28079220-28079239 | MS.gene51229:CDS | 30.0% | |
ATGGGCAAAAACCTATAAAA+GGG | - | chr7.3:28079075-28079094 | MS.gene51229:intron | 30.0% | |
ATTGCAATAGCAGAAGAAAA+TGG | + | chr7.3:28079603-28079622 | None:intergenic | 30.0% | |
CAAGAAAGTGACAAAATTTG+AGG | + | chr7.3:28078609-28078628 | None:intergenic | 30.0% | |
TATAGATGTAGCAGTTCAAA+AGG | - | chr7.3:28079219-28079238 | MS.gene51229:CDS | 30.0% | |
TATGGGCAAAAACCTATAAA+AGG | - | chr7.3:28079074-28079093 | MS.gene51229:intron | 30.0% | |
TCTTGTGTTTGAGCTAATTT+GGG | + | chr7.3:28078771-28078790 | None:intergenic | 30.0% | |
TGCTATTGCAATTCCTAATT+GGG | - | chr7.3:28079611-28079630 | MS.gene51229:CDS | 30.0% | |
TGTGATGATCTTGAAAAGAA+AGG | + | chr7.3:28078690-28078709 | None:intergenic | 30.0% | |
! | CGTTTTCTCTACAAACAAAA+AGG | + | chr7.3:28079752-28079771 | None:intergenic | 30.0% |
!!! | GCTTTTTCATTGAAGAGAAT+AGG | - | chr7.3:28079706-28079725 | MS.gene51229:CDS | 30.0% |
AAGTTCATGCAACTCTTCAA+TGG | + | chr7.3:28078661-28078680 | None:intergenic | 35.0% | |
AGAGTCTCTCTTCAGATATA+TGG | - | chr7.3:28079039-28079058 | MS.gene51229:intron | 35.0% | |
AGTAGTAAACATTCACACCA+AGG | - | chr7.3:28078807-28078826 | MS.gene51229:CDS | 35.0% | |
ATATGGGCATGGAGAAAATA+TGG | - | chr7.3:28079056-28079075 | MS.gene51229:intron | 35.0% | |
CTCTTGTGTTTGAGCTAATT+TGG | + | chr7.3:28078772-28078791 | None:intergenic | 35.0% | |
CTGCTATTGCAATTCCTAAT+TGG | - | chr7.3:28079610-28079629 | MS.gene51229:CDS | 35.0% | |
GAGTCTCTCTTCAGATATAT+GGG | - | chr7.3:28079040-28079059 | MS.gene51229:intron | 35.0% | |
GTCAGAAAGTAGAGAAGAAA+AGG | - | chr7.3:28079473-28079492 | MS.gene51229:CDS | 35.0% | |
TATGGGCATGGAGAAAATAT+GGG | - | chr7.3:28079057-28079076 | MS.gene51229:intron | 35.0% | |
TATTGCAATTCCTAATTGGG+TGG | - | chr7.3:28079614-28079633 | MS.gene51229:CDS | 35.0% | |
! | GTAGAGAAAACGGAACATTT+TGG | - | chr7.3:28079760-28079779 | MS.gene51229:CDS | 35.0% |
!! | ATGGAGTTTCTAGCTTCAAA+AGG | + | chr7.3:28078642-28078661 | None:intergenic | 35.0% |
!! | TGGAGTTTCTAGCTTCAAAA+GGG | + | chr7.3:28078641-28078660 | None:intergenic | 35.0% |
AACAGAGGAAGAAGAAACAG+AGG | + | chr7.3:28078526-28078545 | None:intergenic | 40.0% | |
ACACACAAAAACTCTCTTGC+TGG | - | chr7.3:28079333-28079352 | MS.gene51229:intron | 40.0% | |
AGTAAACATTCACACCAAGG+TGG | - | chr7.3:28078810-28078829 | MS.gene51229:CDS | 40.0% | |
ATAGAAGAGTAGCCACAAGA+AGG | + | chr7.3:28078567-28078586 | None:intergenic | 40.0% | |
CCAACCCAAGATCAAAAAGA+AGG | - | chr7.3:28078841-28078860 | MS.gene51229:CDS | 40.0% | |
GAAGAAGAAACAGAGGATGT+AGG | + | chr7.3:28078519-28078538 | None:intergenic | 40.0% | |
GAAGAAGAGGTTCAAACTCA+AGG | - | chr7.3:28079444-28079463 | MS.gene51229:CDS | 40.0% | |
GACGAAGAAGGAGATGAATT+TGG | - | chr7.3:28079513-28079532 | MS.gene51229:CDS | 40.0% | |
GGAGAAGTTTGCAAAGAAAG+AGG | + | chr7.3:28078714-28078733 | None:intergenic | 40.0% | |
TAAAAGGGTCACCATATCCA+AGG | - | chr7.3:28079090-28079109 | MS.gene51229:intron | 40.0% | |
TCTCTTCAGATATATGGGCA+TGG | - | chr7.3:28079045-28079064 | MS.gene51229:intron | 40.0% | |
TGTGGCTACTCTTCTATCTT+TGG | - | chr7.3:28078570-28078589 | MS.gene51229:intron | 40.0% | |
! | AGTTTTTGTGTGTAGGAGCA+GGG | + | chr7.3:28079326-28079345 | None:intergenic | 40.0% |
! | CCTTCTTTTTGATCTTGGGT+TGG | + | chr7.3:28078844-28078863 | None:intergenic | 40.0% |
! | GAGAAAACGGAACATTTTGG+AGG | - | chr7.3:28079763-28079782 | MS.gene51229:CDS | 40.0% |
! | GCAAGAGAGTTTTTGTGTGT+AGG | + | chr7.3:28079333-28079352 | None:intergenic | 40.0% |
! | GGATATGGTGACCCTTTTAT+AGG | + | chr7.3:28079089-28079108 | None:intergenic | 40.0% |
! | TCTTTGATGGATGACGAAGA+AGG | - | chr7.3:28079501-28079520 | MS.gene51229:CDS | 40.0% |
!! | GGGTTTTGTAGGATCTTTGT+TGG | + | chr7.3:28079400-28079419 | None:intergenic | 40.0% |
!! | TCTTTGTTGGTTTCAGCTTG+AGG | + | chr7.3:28079387-28079406 | None:intergenic | 40.0% |
AGAAACAGAGGATGTAGGTG+TGG | + | chr7.3:28078514-28078533 | None:intergenic | 45.0% | |
AGAAGATTGGGATCTCCATG+CGG | - | chr7.3:28078458-28078477 | MS.gene51229:CDS | 45.0% | |
AGCTAATTTGGGTGAAGCAG+AGG | + | chr7.3:28078760-28078779 | None:intergenic | 45.0% | |
GCACTATTAGCCACCCAATT+AGG | + | chr7.3:28079627-28079646 | None:intergenic | 45.0% | |
GGAGGAATCTTTGCTGACAA+TGG | - | chr7.3:28079781-28079800 | MS.gene51229:CDS | 45.0% | |
TCTGAAGAGAGACTCTCAAC+TGG | + | chr7.3:28079035-28079054 | None:intergenic | 45.0% | |
! | GAGTTTTTGTGTGTAGGAGC+AGG | + | chr7.3:28079327-28079346 | None:intergenic | 45.0% |
! | TCAGCTTGAGGTGGTGTTAA+TGG | + | chr7.3:28079375-28079394 | None:intergenic | 45.0% |
!! | ACAAGAAGGTTCAGGTTGCA+GGG | + | chr7.3:28078553-28078572 | None:intergenic | 45.0% |
!! | ACTCTCTTGCTGGTTCAACA+AGG | - | chr7.3:28079343-28079362 | MS.gene51229:intron | 45.0% |
!! | GTAGGAGAAGAGGGTTTTGT+AGG | + | chr7.3:28079411-28079430 | None:intergenic | 45.0% |
!! | TTGTTGGTTTCAGCTTGAGG+TGG | + | chr7.3:28079384-28079403 | None:intergenic | 45.0% |
AACAGAGGATGTAGGTGTGG+TGG | + | chr7.3:28078511-28078530 | None:intergenic | 50.0% | |
AACCTCAGGAGGTGAAGAAG+AGG | - | chr7.3:28079431-28079450 | MS.gene51229:CDS | 50.0% | |
AACCTCTTCTTCACCTCCTG+AGG | + | chr7.3:28079436-28079455 | None:intergenic | 50.0% | |
AGGTTGCAGGGGAAAAACAG+AGG | + | chr7.3:28078541-28078560 | None:intergenic | 50.0% | |
CCTGAGGTTGTAGGAGAAGA+GGG | + | chr7.3:28079420-28079439 | None:intergenic | 50.0% | |
CTGCAACCTGAACCTTCTTG+TGG | - | chr7.3:28078552-28078571 | MS.gene51229:intron | 50.0% | |
GAGTAGCCACAAGAAGGTTC+AGG | + | chr7.3:28078561-28078580 | None:intergenic | 50.0% | |
TCCTGAGGTTGTAGGAGAAG+AGG | + | chr7.3:28079421-28079440 | None:intergenic | 50.0% | |
TCTTCACCTCCTGAGGTTGT+AGG | + | chr7.3:28079429-28079448 | None:intergenic | 50.0% | |
TCTTCTCCTACAACCTCAGG+AGG | - | chr7.3:28079420-28079439 | MS.gene51229:CDS | 50.0% | |
TGTAGGTGTGGTGGTTGAAG+TGG | + | chr7.3:28078502-28078521 | None:intergenic | 50.0% | |
!! | CAAGAAGGTTCAGGTTGCAG+GGG | + | chr7.3:28078552-28078571 | None:intergenic | 50.0% |
!! | CACAAGAAGGTTCAGGTTGC+AGG | + | chr7.3:28078554-28078573 | None:intergenic | 50.0% |
AGATTGGGATCTCCATGCGG+TGG | - | chr7.3:28078461-28078480 | MS.gene51229:CDS | 55.0% | |
AGCAACCTCTAACCACCGCA+TGG | + | chr7.3:28078476-28078495 | None:intergenic | 55.0% | |
AGGTGTGGTGGTTGAAGTGG+TGG | + | chr7.3:28078499-28078518 | None:intergenic | 55.0% | |
CCCTCTTCTCCTACAACCTC+AGG | - | chr7.3:28079417-28079436 | MS.gene51229:CDS | 55.0% | |
GATCTCCATGCGGTGGTTAG+AGG | - | chr7.3:28078468-28078487 | MS.gene51229:CDS | 55.0% | |
!! | GGTTGGTGAGAGAACCACCT+TGG | + | chr7.3:28078827-28078846 | None:intergenic | 55.0% |
GCTGCTGCTACAGCTGCTGG+TGG | - | chr7.3:28079648-28079667 | MS.gene51229:CDS | 65.0% | |
GCTGCTGCTGCTACAGCTGC+TGG | - | chr7.3:28079645-28079664 | MS.gene51229:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 28078453 | 28079811 | 28078453 | ID=MS.gene51229 |
chr7.3 | mRNA | 28078453 | 28079811 | 28078453 | ID=MS.gene51229.t1;Parent=MS.gene51229 |
chr7.3 | exon | 28079402 | 28079811 | 28079402 | ID=MS.gene51229.t1.exon1;Parent=MS.gene51229.t1 |
chr7.3 | CDS | 28079402 | 28079811 | 28079402 | ID=cds.MS.gene51229.t1;Parent=MS.gene51229.t1 |
chr7.3 | exon | 28079153 | 28079263 | 28079153 | ID=MS.gene51229.t1.exon2;Parent=MS.gene51229.t1 |
chr7.3 | CDS | 28079153 | 28079263 | 28079153 | ID=cds.MS.gene51229.t1;Parent=MS.gene51229.t1 |
chr7.3 | exon | 28078632 | 28079052 | 28078632 | ID=MS.gene51229.t1.exon3;Parent=MS.gene51229.t1 |
chr7.3 | CDS | 28078632 | 28079052 | 28078632 | ID=cds.MS.gene51229.t1;Parent=MS.gene51229.t1 |
chr7.3 | exon | 28078453 | 28078500 | 28078453 | ID=MS.gene51229.t1.exon4;Parent=MS.gene51229.t1 |
chr7.3 | CDS | 28078453 | 28078500 | 28078453 | ID=cds.MS.gene51229.t1;Parent=MS.gene51229.t1 |
Gene Sequence |
Protein sequence |