AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51407

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51407.t1 MTR_0063s0090 90.625 224 21 0 1 224 1 224 1.92e-151 421
MS.gene51407.t1 MTR_0008s0280 50.442 226 86 3 1 217 1 209 1.55e-70 216
MS.gene51407.t1 MTR_1g076150 44.898 245 100 4 1 234 1 221 3.43e-57 182
MS.gene51407.t1 MTR_1g043050 44.545 220 105 3 1 219 1 204 3.13e-56 180
MS.gene51407.t1 MTR_1g043080 43.162 234 112 4 1 234 1 213 6.30e-56 179
MS.gene51407.t1 MTR_2g089450 62.281 114 43 0 1 114 1 114 2.08e-51 167
MS.gene51407.t1 MTR_0251s0050 62.609 115 42 1 1 114 1 115 1.17e-50 166
MS.gene51407.t1 MTR_2g089420 41.518 224 109 8 1 217 1 209 2.08e-50 171
MS.gene51407.t1 MTR_8g095390 56.618 136 55 1 1 136 1 132 4.43e-50 166
MS.gene51407.t1 MTR_0008s0390 61.739 115 43 1 1 114 1 115 5.02e-50 165
MS.gene51407.t1 MTR_1g100653 63.158 114 42 0 1 114 1 114 7.70e-50 165
MS.gene51407.t1 MTR_0008s0470 60.870 115 44 1 1 114 1 115 1.15e-49 164
MS.gene51407.t1 MTR_4g073420 62.281 114 43 0 1 114 1 114 5.02e-49 162
MS.gene51407.t1 MTR_7g096930 64.035 114 41 0 1 114 1 114 5.33e-49 162
MS.gene51407.t1 MTR_5g007370 62.281 114 43 0 1 114 1 114 8.82e-49 162
MS.gene51407.t1 MTR_4g091490 63.478 115 41 1 1 114 1 115 1.68e-48 163
MS.gene51407.t1 MTR_2g011660 63.478 115 41 1 1 114 1 115 3.27e-48 162
MS.gene51407.t1 MTR_4g478180 63.158 114 42 0 1 114 2 115 4.35e-48 162
MS.gene51407.t1 MTR_4g125520 58.871 124 51 0 1 124 1 124 6.24e-48 160
MS.gene51407.t1 MTR_3g074520 60.526 114 45 0 1 114 1 114 7.23e-48 161
MS.gene51407.t1 MTR_3g097450 60.526 114 45 0 1 114 1 114 1.08e-47 159
MS.gene51407.t1 MTR_4g121460 63.158 114 42 0 1 114 1 114 1.82e-47 160
MS.gene51407.t1 MTR_7g115650 58.772 114 47 0 1 114 1 114 2.33e-47 156
MS.gene51407.t1 MTR_2g089620 61.404 114 44 0 1 114 1 114 4.26e-47 159
MS.gene51407.t1 MTR_5g079670 58.407 113 47 0 2 114 1 113 1.12e-46 154
MS.gene51407.t1 MTR_7g117730 56.667 120 52 0 1 120 1 120 1.77e-46 155
MS.gene51407.t1 MTR_5g029840 62.281 114 43 0 1 114 1 114 2.54e-46 157
MS.gene51407.t1 MTR_2g067420 65.138 109 38 0 3 111 5 113 3.85e-46 156
MS.gene51407.t1 MTR_7g076740 57.983 119 49 1 1 118 1 119 4.49e-46 155
MS.gene51407.t1 MTR_1g017000 60.870 115 44 1 1 114 1 115 6.45e-46 154
MS.gene51407.t1 MTR_3g461490 58.772 114 47 0 1 114 1 114 6.77e-46 155
MS.gene51407.t1 MTR_8g027345 59.649 114 46 0 1 114 1 114 8.32e-46 155
MS.gene51407.t1 MTR_2g034790 60.526 114 45 0 1 114 1 114 2.95e-45 154
MS.gene51407.t1 MTR_6g055910 39.583 240 127 7 4 242 6 228 5.18e-45 152
MS.gene51407.t1 MTR_7g011170 57.895 114 48 0 1 114 1 114 1.70e-44 152
MS.gene51407.t1 MTR_4g057635 60.870 115 44 1 1 114 1 115 3.06e-44 151
MS.gene51407.t1 MTR_1g017140 40.187 214 121 3 1 207 1 214 5.05e-44 151
MS.gene51407.t1 MTR_2g095520 61.261 111 42 1 1 110 1 111 5.22e-44 150
MS.gene51407.t1 MTR_1g085040 52.899 138 60 2 9 146 9 141 1.47e-43 150
MS.gene51407.t1 MTR_7g102110 58.261 115 47 1 1 114 1 115 2.22e-43 147
MS.gene51407.t1 MTR_4g102380 57.895 114 48 0 1 114 1 114 2.53e-43 147
MS.gene51407.t1 MTR_5g014990 53.077 130 60 1 1 129 1 130 2.71e-43 149
MS.gene51407.t1 MTR_1g100667 64.706 102 36 0 13 114 14 115 2.73e-43 147
MS.gene51407.t1 MTR_8g031360 58.621 116 46 2 1 114 1 116 3.00e-43 148
MS.gene51407.t1 MTR_3g103570 60.870 115 44 1 1 114 1 115 4.27e-43 149
MS.gene51407.t1 MTR_6g012690 53.030 132 58 1 1 132 1 128 6.87e-43 149
MS.gene51407.t1 MTR_6g009430 50.735 136 63 1 1 136 1 132 9.26e-43 148
MS.gene51407.t1 MTR_4g082290 57.018 114 49 0 1 114 1 114 9.69e-43 149
MS.gene51407.t1 MTR_7g010210 57.018 114 49 0 1 114 1 114 1.11e-42 147
MS.gene51407.t1 MTR_7g010210 57.018 114 49 0 1 114 1 114 1.12e-42 146
MS.gene51407.t1 MTR_3g039990 42.132 197 93 5 1 197 2 177 1.64e-42 146
MS.gene51407.t1 MTR_4g097570 60.909 110 42 1 1 109 1 110 1.71e-42 146
MS.gene51407.t1 MTR_3g083540 57.273 110 47 0 5 114 34 143 1.92e-42 146
MS.gene51407.t1 MTR_5g078140 53.030 132 58 1 1 132 1 128 2.85e-42 146
MS.gene51407.t1 MTR_3g065440 57.018 114 49 0 1 114 1 114 2.85e-42 146
MS.gene51407.t1 MTR_2g064160 58.491 106 44 0 9 114 8 113 4.30e-42 145
MS.gene51407.t1 MTR_7g110830 51.449 138 63 1 9 146 9 142 5.54e-42 146
MS.gene51407.t1 MTR_4g100720 55.932 118 47 2 4 118 2 117 1.02e-41 140
MS.gene51407.t1 MTR_1g085640 51.111 135 62 1 9 143 9 139 1.10e-41 146
MS.gene51407.t1 MTR_4g097570 60.360 111 42 2 1 109 1 111 1.15e-41 144
MS.gene51407.t1 MTR_6g012180 56.757 111 48 0 1 111 1 111 1.43e-41 144
MS.gene51407.t1 MTR_4g485530 59.813 107 40 1 8 114 11 114 1.61e-41 140
MS.gene51407.t1 MTR_1g112760 45.399 163 76 3 9 165 10 165 2.05e-41 141
MS.gene51407.t1 MTR_8g020490 57.895 114 44 1 1 114 1 110 2.61e-41 142
MS.gene51407.t1 MTR_6g090405 51.034 145 65 3 1 144 1 140 3.74e-41 141
MS.gene51407.t1 MTR_4g128670 52.941 136 63 1 1 135 1 136 1.11e-40 143
MS.gene51407.t1 MTR_2g099740 53.846 117 54 0 8 124 8 124 1.92e-40 143
MS.gene51407.t1 MTR_4g082230 55.263 114 51 0 1 114 1 114 3.94e-40 142
MS.gene51407.t1 MTR_7g109320 61.404 114 44 0 1 114 1 114 4.08e-40 141
MS.gene51407.t1 MTR_3g077110 53.226 124 54 1 9 132 9 128 4.21e-40 141
MS.gene51407.t1 MTR_4g105130 38.000 200 111 3 9 205 9 198 6.07e-40 141
MS.gene51407.t1 MTR_7g087130 56.140 114 50 0 1 114 1 114 7.14e-40 140
MS.gene51407.t1 MTR_3g052450 57.944 107 45 0 8 114 36 142 1.08e-39 144
MS.gene51407.t1 MTR_1g062940 57.282 103 44 0 12 114 6 108 1.86e-39 136
MS.gene51407.t1 MTR_0140s0030 53.509 114 53 0 1 114 2 115 2.10e-39 139
MS.gene51407.t1 MTR_0489s0020 53.509 114 53 0 1 114 2 115 2.10e-39 139
MS.gene51407.t1 MTR_7g111290 60.396 101 40 0 9 109 9 109 3.02e-39 140
MS.gene51407.t1 MTR_8g017440 55.140 107 48 0 8 114 8 114 3.05e-39 139
MS.gene51407.t1 MTR_8g017540 55.140 107 48 0 8 114 54 160 5.93e-39 139
MS.gene51407.t1 MTR_8g098860 55.140 107 48 0 8 114 8 114 7.43e-39 137
MS.gene51407.t1 MTR_3g052430 58.252 103 43 0 12 114 41 143 9.76e-39 141
MS.gene51407.t1 MTR_1g086510 41.071 168 84 3 8 167 17 177 1.11e-38 135
MS.gene51407.t1 MTR_1g110460 52.727 110 52 0 8 117 22 131 1.38e-38 136
MS.gene51407.t1 MTR_8g017500 53.097 113 53 0 8 120 8 120 1.63e-38 137
MS.gene51407.t1 MTR_1g086530 48.760 121 55 1 12 125 33 153 2.29e-38 135
MS.gene51407.t1 MTR_5g010020 55.769 104 46 0 8 111 8 111 2.90e-38 136
MS.gene51407.t1 MTR_2g097910 54.369 103 47 0 12 114 20 122 6.00e-38 135
MS.gene51407.t1 MTR_1g045610 54.717 106 48 0 13 118 22 127 6.38e-38 133
MS.gene51407.t1 MTR_0197s0010 57.576 99 42 0 16 114 5 103 1.04e-37 132
MS.gene51407.t1 MTR_1g073170 54.717 106 48 0 13 118 21 126 1.07e-37 132
MS.gene51407.t1 MTR_3g011610 53.271 107 50 0 12 118 37 143 1.23e-37 138
MS.gene51407.t1 MTR_5g042030 57.692 104 44 0 11 114 6 109 1.69e-37 133
MS.gene51407.t1 MTR_7g035075 57.282 103 44 0 12 114 14 116 1.71e-37 130
MS.gene51407.t1 MTR_5g079290 53.846 104 48 0 11 114 16 119 2.02e-37 132
MS.gene51407.t1 MTR_6g006030 53.636 110 51 0 12 121 14 123 4.14e-37 129
MS.gene51407.t1 MTR_4g065017 55.238 105 47 0 10 114 15 119 6.29e-37 132
MS.gene51407.t1 MTR_8g042410 55.340 103 46 0 12 114 37 139 1.49e-36 135
MS.gene51407.t1 MTR_5g079120 51.402 107 52 0 8 114 57 163 2.58e-36 130
MS.gene51407.t1 MTR_5g079220 51.923 104 50 0 11 114 20 123 3.36e-36 129
MS.gene51407.t1 MTR_5g078800 52.885 104 49 0 11 114 6 109 3.72e-36 129
MS.gene51407.t1 MTR_3g028740 54.206 107 49 0 8 114 18 124 3.78e-36 130
MS.gene51407.t1 MTR_7g017260 37.433 187 86 4 11 193 24 183 6.77e-36 128
MS.gene51407.t1 MTR_1g021230 54.206 107 49 0 12 118 57 163 7.28e-36 132
MS.gene51407.t1 MTR_8g017340 56.075 107 46 1 9 114 9 115 2.47e-35 131
MS.gene51407.t1 MTR_8g017390 52.778 108 50 1 8 114 8 115 2.62e-35 131
MS.gene51407.t1 MTR_0247s0040 50.000 106 53 0 8 113 3 108 2.74e-35 124
MS.gene51407.t1 MTR_8g060940 52.941 102 48 0 11 112 6 107 2.81e-35 126
MS.gene51407.t1 MTR_5g078950 51.456 103 50 0 11 113 6 108 5.32e-35 125
MS.gene51407.t1 MTR_0001s0360 52.885 104 49 0 11 114 6 109 1.27e-34 124
MS.gene51407.t1 MTR_8g017350 55.140 107 47 1 9 114 9 115 2.23e-34 130
MS.gene51407.t1 MTR_4g063100 50.980 102 50 0 13 114 8 109 2.95e-34 124
MS.gene51407.t1 MTR_5g078860 51.923 104 50 0 11 114 6 109 3.56e-34 125
MS.gene51407.t1 MTR_0193s0090 38.854 157 86 2 11 157 6 162 6.74e-34 121
MS.gene51407.t1 MTR_5g078910 50.485 103 51 0 12 114 7 109 7.00e-34 124
MS.gene51407.t1 MTR_2g096380 49.074 108 55 0 12 119 6 113 1.18e-33 121
MS.gene51407.t1 MTR_2g088170 53.636 110 51 0 9 118 26 135 1.66e-33 125
MS.gene51407.t1 MTR_2g033170 50.000 124 55 1 12 128 24 147 2.03e-33 123
MS.gene51407.t1 MTR_1g083630 54.717 106 48 0 12 117 12 117 5.47e-33 126
MS.gene51407.t1 MTR_4g123040 50.000 124 55 1 12 128 24 147 9.18e-33 121
MS.gene51407.t1 MTR_5g007300 59.091 88 36 0 1 88 53 140 1.58e-32 115
MS.gene51407.t1 MTR_5g062790 47.664 107 55 1 12 117 9 115 2.68e-32 120
MS.gene51407.t1 MTR_5g088080 47.664 107 55 1 12 117 12 118 3.80e-32 118
MS.gene51407.t1 MTR_5g088150 47.664 107 55 1 12 117 12 118 3.80e-32 118
MS.gene51407.t1 MTR_5g488210 47.664 107 55 1 12 117 12 118 3.80e-32 118
MS.gene51407.t1 MTR_5g088640 47.664 107 55 1 12 117 12 118 6.11e-32 118
MS.gene51407.t1 MTR_5g488170 47.664 107 55 1 12 117 12 118 8.79e-32 117
MS.gene51407.t1 MTR_5g078930 45.455 121 62 1 13 129 10 130 1.45e-31 115
MS.gene51407.t1 MTR_8g006470 47.748 111 57 1 8 117 6 116 5.67e-31 116
MS.gene51407.t1 MTR_6g055910 37.313 201 108 7 43 242 16 199 1.45e-30 114
MS.gene51407.t1 MTR_4g029540 46.018 113 60 1 7 118 5 117 3.97e-30 114
MS.gene51407.t1 MTR_3g045430 44.348 115 63 1 1 114 1 115 1.35e-29 112
MS.gene51407.t1 MTR_5g088610 47.664 107 55 1 12 117 9 115 4.99e-29 112
MS.gene51407.t1 MTR_5g016510 45.038 131 61 4 14 135 5 133 9.34e-29 110
MS.gene51407.t1 MTR_4g094982 50.000 104 50 2 14 116 5 107 2.03e-28 108
MS.gene51407.t1 MTR_3g101290 47.525 101 52 1 14 114 37 136 2.77e-28 107
MS.gene51407.t1 MTR_4g019370 50.000 102 48 2 14 114 38 137 3.13e-27 107
MS.gene51407.t1 MTR_4g063100 59.722 72 29 0 43 114 9 80 3.28e-27 104
MS.gene51407.t1 MTR_5g082910 47.273 110 48 3 8 112 12 116 2.29e-26 103
MS.gene51407.t1 MTR_2g096380 55.844 77 34 0 43 119 18 94 4.53e-26 101
MS.gene51407.t1 MTR_6g015455 50.000 104 50 2 14 116 5 107 6.43e-26 106
MS.gene51407.t1 MTR_7g111290 62.687 67 25 0 43 109 1 67 2.63e-25 102
MS.gene51407.t1 MTR_5g070020 37.857 140 81 4 14 149 122 259 4.68e-25 101
MS.gene51407.t1 MTR_5g049190 39.130 115 67 2 8 121 13 125 1.42e-24 98.2
MS.gene51407.t1 MTR_4g128190 41.667 108 49 2 11 117 10 104 2.44e-24 97.4
MS.gene51407.t1 MTR_6g074860 41.121 107 60 2 14 119 4 108 2.92e-24 97.4
MS.gene51407.t1 MTR_6g027340 33.152 184 111 5 14 195 16 189 3.44e-24 96.3
MS.gene51407.t1 MTR_7g061330 47.059 102 51 2 14 114 113 212 8.50e-24 99.8
MS.gene51407.t1 MTR_7g061330 34.000 100 64 2 14 112 61 159 1.87e-12 66.6
MS.gene51407.t1 MTR_7g461410 47.059 102 51 2 14 114 113 212 8.50e-24 99.8
MS.gene51407.t1 MTR_7g461410 34.000 100 64 2 14 112 61 159 1.87e-12 66.6
MS.gene51407.t1 MTR_1g085880 47.619 105 53 2 12 114 11 115 1.19e-23 94.4
MS.gene51407.t1 MTR_7g061330 47.059 102 51 2 14 114 77 176 1.46e-23 99.0
MS.gene51407.t1 MTR_7g061330 34.000 100 64 2 14 112 25 123 2.46e-12 66.2
MS.gene51407.t1 MTR_4g082040 35.714 140 79 5 14 149 105 237 2.80e-23 97.4
MS.gene51407.t1 MTR_1g085770 47.619 105 53 2 12 114 11 115 5.39e-23 95.1
MS.gene51407.t1 MTR_5g041570 43.137 102 55 2 14 114 134 233 6.80e-23 96.7
MS.gene51407.t1 MTR_4g105660 40.833 120 63 3 12 125 178 295 1.02e-22 95.9
MS.gene51407.t1 MTR_3g089045 43.519 108 58 2 8 114 10 115 1.07e-22 94.4
MS.gene51407.t1 MTR_6g027360 33.880 183 107 5 12 193 76 245 1.25e-22 94.4
MS.gene51407.t1 MTR_3g077650 38.571 140 78 3 14 147 181 318 1.35e-22 95.9
MS.gene51407.t1 MTR_3g463400 38.182 110 65 2 14 122 133 240 1.35e-21 93.2
MS.gene51407.t1 MTR_7g035350 42.718 103 57 2 8 110 220 320 1.89e-21 92.8
MS.gene51407.t1 MTR_3g110028 43.137 102 55 2 14 114 85 184 2.16e-21 93.2
MS.gene51407.t1 MTR_3g110028 34.286 105 57 3 14 112 33 131 1.46e-12 67.0
MS.gene51407.t1 MTR_1g057980 39.815 108 64 1 12 119 78 184 3.63e-21 90.1
MS.gene51407.t1 MTR_7g451170 37.069 116 72 1 14 129 191 305 3.94e-21 91.7
MS.gene51407.t1 MTR_7g037260 37.069 116 72 1 12 127 143 257 7.55e-21 90.1
MS.gene51407.t1 MTR_1g026870 43.137 102 55 2 14 114 85 184 8.08e-21 91.3
MS.gene51407.t1 MTR_1g026870 34.286 105 57 3 14 112 33 131 3.53e-13 68.9
MS.gene51407.t1 MTR_7g086960 37.097 124 70 3 14 131 89 210 3.66e-20 88.2
MS.gene51407.t1 MTR_6g027370 37.719 114 68 2 14 127 99 209 1.04e-19 87.0
MS.gene51407.t1 MTR_4g088015 38.835 103 62 1 12 114 219 320 1.47e-19 87.0
MS.gene51407.t1 MTR_7g037130 38.889 108 64 2 12 119 143 248 2.72e-19 85.9
MS.gene51407.t1 MTR_7g061550 32.824 131 80 3 17 145 10 134 3.92e-19 85.5
MS.gene51407.t1 MTR_5g010650 42.708 96 54 1 14 109 110 204 6.03e-19 85.5
MS.gene51407.t1 MTR_0023s0210 43.590 78 44 0 11 88 6 83 1.29e-18 78.2
MS.gene51407.t1 MTR_7g450950 37.113 97 60 1 14 110 157 252 9.39e-18 81.3
MS.gene51407.t1 MTR_6g055910 33.529 170 95 7 74 242 6 158 7.19e-15 71.6
MS.gene51407.t1 MTR_8g468380 33.645 107 60 2 17 118 25 125 1.06e-12 67.4
MS.gene51407.t1 MTR_5g038910 33.663 101 66 1 17 117 29 128 1.27e-12 67.0
MS.gene51407.t1 MTR_5g038910 33.663 101 66 1 17 117 29 128 2.21e-12 66.2
MS.gene51407.t1 MTR_4g063100 56.818 44 19 0 71 114 2 45 5.17e-12 63.2
MS.gene51407.t1 MTR_2g096380 51.020 49 24 0 71 119 2 50 2.85e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51407.t1 AT1G79180 69.643 112 34 0 3 114 5 116 3.67e-53 174
MS.gene51407.t1 AT1G16490 66.964 112 37 0 3 114 5 116 2.66e-51 168
MS.gene51407.t1 AT5G16770 51.534 163 67 3 1 162 1 152 5.08e-51 169
MS.gene51407.t1 AT5G16770 51.534 163 67 3 1 162 1 152 5.08e-51 169
MS.gene51407.t1 AT5G16770 51.534 163 67 3 1 162 1 152 6.16e-51 169
MS.gene51407.t1 AT5G16770 51.534 163 67 3 1 162 1 152 6.16e-51 169
MS.gene51407.t1 AT5G10280 62.281 114 43 0 1 114 1 114 7.33e-51 169
MS.gene51407.t1 AT3G23250 62.295 122 44 1 1 122 1 120 1.30e-50 167
MS.gene51407.t1 AT4G21440 63.158 114 42 0 1 114 1 114 1.86e-50 168
MS.gene51407.t1 AT1G35515 63.158 114 42 0 1 114 1 114 4.24e-50 163
MS.gene51407.t1 AT1G22640 63.158 114 42 0 1 114 1 114 5.11e-50 164
MS.gene51407.t1 AT4G09460 63.158 114 42 0 1 114 1 114 8.56e-50 163
MS.gene51407.t1 AT4G28110 63.158 114 42 0 1 114 1 114 9.34e-50 164
MS.gene51407.t1 AT2G31180 64.035 114 41 0 1 114 1 114 1.23e-49 163
MS.gene51407.t1 AT1G06180 64.912 114 40 0 1 114 1 114 2.02e-49 162
MS.gene51407.t1 AT4G38620 62.281 114 43 0 1 114 1 114 2.89e-49 163
MS.gene51407.t1 AT2G16720 42.857 210 94 5 1 201 1 193 7.25e-49 162
MS.gene51407.t1 AT3G12820 65.179 112 39 0 3 114 5 116 7.50e-49 160
MS.gene51407.t1 AT5G65230 62.281 114 43 0 1 114 1 114 2.19e-48 162
MS.gene51407.t1 AT3G02940 61.404 114 44 0 1 114 1 114 3.83e-48 161
MS.gene51407.t1 AT1G74080 49.682 157 75 1 1 157 1 153 5.31e-48 161
MS.gene51407.t1 AT3G02940 61.404 114 44 0 1 114 1 114 5.68e-48 161
MS.gene51407.t1 AT3G02940 61.404 114 44 0 1 114 1 114 5.68e-48 161
MS.gene51407.t1 AT1G56160 65.179 112 39 0 3 114 5 116 1.08e-47 159
MS.gene51407.t1 AT4G34990 60.526 114 45 0 1 114 1 114 3.37e-47 157
MS.gene51407.t1 AT5G49330 63.158 114 42 0 1 114 1 114 5.65e-47 159
MS.gene51407.t1 AT4G05100 61.739 115 43 1 1 114 1 115 6.73e-47 158
MS.gene51407.t1 AT2G47460 62.281 114 43 0 1 114 1 114 1.25e-46 159
MS.gene51407.t1 AT1G34670 61.404 114 44 0 1 114 1 114 1.25e-46 159
MS.gene51407.t1 AT1G79180 53.103 145 35 1 3 114 5 149 1.67e-46 157
MS.gene51407.t1 AT3G62610 61.404 114 44 0 1 114 1 114 1.74e-46 158
MS.gene51407.t1 AT5G60890 43.605 172 93 1 1 172 1 168 2.41e-46 156
MS.gene51407.t1 AT3G61250 58.772 114 47 0 1 114 1 114 7.40e-46 155
MS.gene51407.t1 AT5G61420 52.778 144 59 2 1 139 1 140 1.03e-45 156
MS.gene51407.t1 AT1G57560 53.383 133 58 1 9 141 9 137 2.31e-45 153
MS.gene51407.t1 AT5G07690 59.649 114 46 0 1 114 1 114 3.77e-45 154
MS.gene51407.t1 AT5G07700 51.079 139 64 1 1 139 1 135 4.13e-45 154
MS.gene51407.t1 AT5G07700 51.079 139 64 1 1 139 1 135 4.13e-45 154
MS.gene51407.t1 AT3G01140 59.649 114 46 0 1 114 1 114 6.00e-45 154
MS.gene51407.t1 AT4G22680 50.000 150 71 1 1 150 1 146 7.45e-45 151
MS.gene51407.t1 AT1G57560 53.285 137 58 2 9 143 9 141 1.12e-44 152
MS.gene51407.t1 AT5G56110 58.772 114 47 0 1 114 1 114 1.35e-44 152
MS.gene51407.t1 AT1G18570 59.130 115 46 1 1 114 1 115 1.56e-44 153
MS.gene51407.t1 AT1G66230 42.647 204 109 4 1 203 1 197 2.50e-44 150
MS.gene51407.t1 AT3G01140 58.772 114 47 0 1 114 44 157 3.43e-44 153
MS.gene51407.t1 AT3G13540 44.767 172 82 3 4 175 15 173 4.47e-44 149
MS.gene51407.t1 AT4G17785 57.391 115 48 1 1 114 1 115 5.64e-44 151
MS.gene51407.t1 AT4G17785 57.391 115 48 1 1 114 1 115 5.82e-44 152
MS.gene51407.t1 AT5G15310 53.788 132 57 1 1 132 1 128 7.24e-44 150
MS.gene51407.t1 AT5G15310 53.788 132 57 1 1 132 1 128 8.27e-44 150
MS.gene51407.t1 AT5G15310 53.788 132 57 1 1 132 1 128 8.74e-44 148
MS.gene51407.t1 AT4G37780 56.818 132 56 1 1 131 1 132 9.34e-44 149
MS.gene51407.t1 AT5G14750 45.223 157 79 2 10 159 14 170 1.24e-43 146
MS.gene51407.t1 AT5G57620 54.545 132 55 2 1 127 1 132 2.09e-43 149
MS.gene51407.t1 AT5G16600 53.285 137 60 1 1 137 1 133 4.08e-43 149
MS.gene51407.t1 AT5G26660 54.264 129 55 1 9 137 9 133 6.32e-43 149
MS.gene51407.t1 AT3G12720 59.434 106 43 0 9 114 19 124 7.46e-43 147
MS.gene51407.t1 AT5G65790 56.452 124 53 1 1 123 1 124 8.53e-43 149
MS.gene51407.t1 AT3G49690 56.452 124 53 1 1 123 1 124 1.46e-42 147
MS.gene51407.t1 AT1G18710 56.140 114 50 0 1 114 1 114 1.64e-42 145
MS.gene51407.t1 AT4G12350 57.895 114 48 0 1 114 1 114 1.68e-42 146
MS.gene51407.t1 AT5G23000 58.261 115 47 1 1 114 1 115 2.64e-42 146
MS.gene51407.t1 AT5G54230 63.107 103 38 0 12 114 12 114 3.31e-42 146
MS.gene51407.t1 AT1G74430 48.889 135 65 1 1 135 1 131 5.54e-42 144
MS.gene51407.t1 AT3G28910 57.018 114 49 0 1 114 1 114 6.53e-42 145
MS.gene51407.t1 AT3G27920 37.879 198 103 4 13 198 15 204 2.14e-41 141
MS.gene51407.t1 AT2G36890 59.130 115 46 1 1 114 1 115 2.63e-41 143
MS.gene51407.t1 AT5G40330 55.882 102 45 0 13 114 13 114 2.68e-41 140
MS.gene51407.t1 AT2G36890 59.130 115 46 1 1 114 42 156 3.08e-41 144
MS.gene51407.t1 AT1G09540 52.713 129 57 1 9 137 9 133 3.15e-41 144
MS.gene51407.t1 AT5G35550 61.165 103 40 0 12 114 14 116 4.92e-41 141
MS.gene51407.t1 AT5G14340 56.140 114 50 0 1 114 13 126 6.33e-41 141
MS.gene51407.t1 AT3G47600 49.650 143 62 2 1 143 1 133 7.55e-41 143
MS.gene51407.t1 AT3G28470 54.545 110 50 0 1 110 1 110 2.46e-40 141
MS.gene51407.t1 AT1G08810 57.018 114 49 0 1 114 1 114 2.81e-40 140
MS.gene51407.t1 AT4G01680 57.018 114 49 0 1 114 1 114 4.50e-40 138
MS.gene51407.t1 AT2G32460 55.556 108 48 0 11 118 17 124 4.69e-40 144
MS.gene51407.t1 AT2G32460 55.556 108 48 0 11 118 5 112 5.45e-40 144
MS.gene51407.t1 AT5G62320 51.261 119 51 1 3 114 4 122 1.09e-39 137
MS.gene51407.t1 AT5G62470 55.263 114 51 0 1 114 1 114 1.19e-39 140
MS.gene51407.t1 AT3G13890 55.140 107 48 0 8 114 8 114 2.71e-39 139
MS.gene51407.t1 AT1G74650 55.263 114 51 0 1 114 1 114 2.77e-39 139
MS.gene51407.t1 AT4G01680 57.018 114 49 0 1 114 1 114 3.12e-39 139
MS.gene51407.t1 AT3G24310 57.407 108 46 0 11 118 17 124 3.17e-39 137
MS.gene51407.t1 AT5G52260 47.742 155 72 2 1 146 1 155 3.74e-39 137
MS.gene51407.t1 AT1G63910 55.140 107 48 0 8 114 8 114 8.24e-39 138
MS.gene51407.t1 AT3G11440 56.311 103 45 0 12 114 41 143 1.65e-38 139
MS.gene51407.t1 AT3G30210 49.606 127 64 0 11 137 26 152 1.83e-38 135
MS.gene51407.t1 AT5G55020 57.282 103 44 0 12 114 26 128 2.63e-38 140
MS.gene51407.t1 AT3G27810 53.913 115 53 0 12 126 20 134 2.95e-38 133
MS.gene51407.t1 AT3G11440 56.311 103 45 0 12 114 41 143 3.61e-38 140
MS.gene51407.t1 AT3G11440 56.311 103 45 0 12 114 41 143 3.61e-38 140
MS.gene51407.t1 AT3G11440 56.311 103 45 0 12 114 41 143 3.61e-38 140
MS.gene51407.t1 AT4G26930 56.311 103 45 0 12 114 19 121 4.15e-38 137
MS.gene51407.t1 AT5G62470 55.263 114 50 1 1 114 1 113 4.41e-38 136
MS.gene51407.t1 AT5G06100 51.786 112 54 0 7 118 27 138 6.29e-38 137
MS.gene51407.t1 AT5G12870 55.340 103 46 0 12 114 18 120 9.53e-38 133
MS.gene51407.t1 AT5G52600 50.450 111 55 0 9 119 9 119 1.34e-37 130
MS.gene51407.t1 AT1G48000 50.806 124 54 2 12 128 32 155 1.36e-37 132
MS.gene51407.t1 AT5G06100 51.786 112 54 0 7 118 27 138 1.61e-37 137
MS.gene51407.t1 AT5G06100 51.786 112 54 0 7 118 27 138 1.61e-37 137
MS.gene51407.t1 AT5G06100 51.786 112 54 0 7 118 27 138 1.61e-37 137
MS.gene51407.t1 AT5G06100 51.786 112 54 0 7 118 27 138 1.61e-37 137
MS.gene51407.t1 AT3G48920 53.448 116 54 0 9 124 15 130 2.01e-37 132
MS.gene51407.t1 AT4G13480 56.190 105 46 0 13 117 7 111 3.17e-37 131
MS.gene51407.t1 AT4G25560 59.804 102 41 0 13 114 11 112 8.88e-37 131
MS.gene51407.t1 AT3G08500 54.206 107 49 0 8 114 26 132 2.02e-36 131
MS.gene51407.t1 AT5G40350 41.279 172 87 3 12 169 17 188 2.18e-36 128
MS.gene51407.t1 AT1G68320 51.887 106 51 0 12 117 19 124 2.28e-36 130
MS.gene51407.t1 AT3G13890 50.862 116 48 1 8 114 8 123 3.78e-36 131
MS.gene51407.t1 AT2G47190 51.887 106 51 0 12 117 20 125 6.21e-36 128
MS.gene51407.t1 AT4G01680 53.390 118 43 1 9 114 9 126 7.23e-36 130
MS.gene51407.t1 AT3G01530 52.830 106 50 0 12 117 25 130 9.99e-36 126
MS.gene51407.t1 AT1G25340 52.381 105 50 0 13 117 19 123 2.42e-35 127
MS.gene51407.t1 AT1G66380 42.759 145 69 1 11 155 7 137 2.83e-35 123
MS.gene51407.t1 AT1G66370 47.107 121 59 1 11 126 7 127 3.06e-35 126
MS.gene51407.t1 AT1G56650 44.375 160 72 4 11 155 7 164 3.50e-35 126
MS.gene51407.t1 AT2G26960 51.376 109 53 0 9 117 17 125 3.71e-35 130
MS.gene51407.t1 AT3G53200 45.255 137 68 1 6 135 3 139 1.37e-34 124
MS.gene51407.t1 AT3G46130 49.541 109 55 0 11 119 8 116 3.00e-34 124
MS.gene51407.t1 AT5G59780 49.533 107 54 0 13 119 9 115 5.25e-34 122
MS.gene51407.t1 AT3G06490 48.438 128 59 1 8 128 15 142 2.67e-33 123
MS.gene51407.t1 AT1G66390 52.885 104 49 0 11 114 7 110 1.35e-32 119
MS.gene51407.t1 AT5G49620 49.194 124 56 1 12 128 26 149 1.57e-32 120
MS.gene51407.t1 AT5G14750 46.610 118 51 3 40 145 5 122 9.74e-32 114
MS.gene51407.t1 AT1G25340 49.524 105 48 1 13 117 19 118 1.20e-30 115
MS.gene51407.t1 AT1G25340 49.524 105 48 1 13 117 19 118 2.03e-30 115
MS.gene51407.t1 AT5G35550 65.333 75 26 0 40 114 45 119 3.39e-30 113
MS.gene51407.t1 AT3G60460 43.636 110 61 1 9 117 8 117 5.16e-29 111
MS.gene51407.t1 AT5G49620 44.203 138 56 2 12 128 26 163 9.33e-29 110
MS.gene51407.t1 AT5G26660 55.914 93 37 1 45 137 14 102 1.95e-28 110
MS.gene51407.t1 AT3G12820 68.657 67 21 0 48 114 2 68 3.35e-28 106
MS.gene51407.t1 AT2G26950 47.059 102 54 0 9 110 13 114 4.12e-28 110
MS.gene51407.t1 AT3G09230 48.571 105 45 2 14 114 55 154 1.08e-27 109
MS.gene51407.t1 AT3G27810 57.317 82 35 0 45 126 4 85 1.11e-27 104
MS.gene51407.t1 AT3G53200 52.041 98 40 1 45 135 9 106 1.32e-27 105
MS.gene51407.t1 AT2G23290 43.165 139 72 3 14 151 13 145 1.53e-27 107
MS.gene51407.t1 AT4G37260 50.962 104 49 2 14 116 13 115 4.88e-27 106
MS.gene51407.t1 AT3G50060 48.077 104 52 2 14 116 6 108 5.39e-27 105
MS.gene51407.t1 AT3G46130 57.895 76 32 0 44 119 9 84 9.00e-27 103
MS.gene51407.t1 AT5G59780 58.667 75 31 0 45 119 20 94 9.36e-27 103
MS.gene51407.t1 AT1G69560 33.028 218 116 10 9 216 102 299 9.83e-27 105
MS.gene51407.t1 AT1G69560 32.569 218 117 9 9 216 118 315 1.18e-26 105
MS.gene51407.t1 AT3G46130 58.667 75 31 0 45 119 20 94 2.01e-26 102
MS.gene51407.t1 AT5G67300 44.954 109 59 1 14 122 6 113 4.33e-26 103
MS.gene51407.t1 AT5G40350 60.000 70 28 0 45 114 5 74 1.73e-25 98.6
MS.gene51407.t1 AT3G55730 48.039 102 50 2 14 114 56 155 2.26e-25 103
MS.gene51407.t1 AT1G17950 42.056 107 59 2 14 119 5 109 7.11e-25 99.4
MS.gene51407.t1 AT3G09370 36.066 183 105 6 14 195 143 314 2.37e-24 101
MS.gene51407.t1 AT3G09370 35.000 100 63 2 14 112 91 189 3.04e-12 66.2
MS.gene51407.t1 AT3G09370 36.066 183 105 6 14 195 135 306 2.79e-24 100
MS.gene51407.t1 AT3G09370 35.000 100 63 2 14 112 83 181 3.54e-12 65.9
MS.gene51407.t1 AT3G09370 36.066 183 105 6 14 195 130 301 3.20e-24 100
MS.gene51407.t1 AT3G09370 35.000 100 63 2 14 112 78 176 3.87e-12 65.9
MS.gene51407.t1 AT3G27785 42.017 119 67 2 9 126 184 301 3.82e-24 100
MS.gene51407.t1 AT3G47600 48.485 99 41 2 45 143 39 127 6.88e-24 98.2
MS.gene51407.t1 AT1G66380 41.593 113 52 1 43 155 6 104 8.73e-24 92.4
MS.gene51407.t1 AT3G29020 30.435 161 99 4 14 171 65 215 1.53e-23 95.1
MS.gene51407.t1 AT5G02320 45.098 102 53 2 14 114 127 226 1.94e-23 99.0
MS.gene51407.t1 AT5G02320 34.000 100 64 2 14 112 75 173 7.03e-13 68.2
MS.gene51407.t1 AT5G02320 45.098 102 53 2 14 114 127 226 1.94e-23 99.0
MS.gene51407.t1 AT5G02320 34.000 100 64 2 14 112 75 173 7.03e-13 68.2
MS.gene51407.t1 AT5G02320 45.098 102 53 2 14 114 67 166 2.50e-23 98.2
MS.gene51407.t1 AT5G02320 34.000 100 64 2 14 112 15 113 9.52e-13 67.4
MS.gene51407.t1 AT3G29020 34.028 144 88 3 14 157 67 203 3.32e-23 95.9
MS.gene51407.t1 AT1G26780 42.308 104 57 2 12 114 96 197 3.40e-23 96.7
MS.gene51407.t1 AT1G26780 42.308 104 57 2 12 114 96 197 3.52e-23 95.5
MS.gene51407.t1 AT1G73410 43.810 105 56 2 14 117 6 108 9.23e-23 93.6
MS.gene51407.t1 AT1G73410 43.396 106 57 2 14 118 6 109 1.07e-22 92.4
MS.gene51407.t1 AT5G40360 36.842 114 71 1 1 114 145 257 1.38e-22 95.1
MS.gene51407.t1 AT5G58850 38.182 110 65 2 14 122 105 212 2.97e-22 94.7
MS.gene51407.t1 AT1G66380 50.000 82 41 0 11 92 7 88 5.14e-22 87.8
MS.gene51407.t1 AT5G14750 45.263 95 45 2 58 145 1 95 5.63e-22 88.6
MS.gene51407.t1 AT5G14750 45.263 95 45 2 58 145 1 95 5.63e-22 88.6
MS.gene51407.t1 AT4G18770 37.736 106 65 1 9 114 212 316 6.09e-22 94.0
MS.gene51407.t1 AT1G22640 66.667 57 19 0 58 114 1 57 7.55e-22 90.1
MS.gene51407.t1 AT4G32730 43.137 102 55 2 14 114 87 186 1.02e-21 94.0
MS.gene51407.t1 AT4G32730 33.333 105 58 3 14 112 35 133 2.17e-11 63.9
MS.gene51407.t1 AT4G32730 43.137 102 55 2 14 114 87 186 1.02e-21 94.0
MS.gene51407.t1 AT4G32730 33.333 105 58 3 14 112 35 133 2.17e-11 63.9
MS.gene51407.t1 AT4G32730 43.137 102 55 2 14 114 87 186 1.02e-21 94.0
MS.gene51407.t1 AT4G32730 33.333 105 58 3 14 112 35 133 2.17e-11 63.9
MS.gene51407.t1 AT4G32730 43.137 102 55 2 14 114 87 186 1.02e-21 94.0
MS.gene51407.t1 AT4G32730 33.333 105 58 3 14 112 35 133 2.17e-11 63.9
MS.gene51407.t1 AT5G17800 39.423 104 62 1 14 117 93 195 1.12e-21 92.0
MS.gene51407.t1 AT4G32730 43.137 102 55 2 14 114 87 186 1.31e-21 93.6
MS.gene51407.t1 AT4G32730 33.333 105 58 3 14 112 35 133 2.50e-11 63.5
MS.gene51407.t1 AT5G11050 38.182 110 65 2 14 122 105 212 1.33e-21 92.8
MS.gene51407.t1 AT4G33450 35.938 128 80 2 9 136 14 139 1.47e-21 90.5
MS.gene51407.t1 AT5G11510 40.594 101 59 1 14 114 81 180 1.51e-21 93.6
MS.gene51407.t1 AT5G11510 34.000 100 64 2 14 112 29 127 8.08e-12 65.1
MS.gene51407.t1 AT5G11510 40.594 101 59 1 14 114 81 180 1.51e-21 93.6
MS.gene51407.t1 AT5G11510 34.000 100 64 2 14 112 29 127 8.08e-12 65.1
MS.gene51407.t1 AT5G11510 40.594 101 59 1 14 114 81 180 1.51e-21 93.6
MS.gene51407.t1 AT5G11510 34.000 100 64 2 14 112 29 127 8.08e-12 65.1
MS.gene51407.t1 AT2G39880 44.762 105 49 2 14 114 50 149 1.53e-21 92.0
MS.gene51407.t1 AT5G11510 40.594 101 59 1 14 114 81 180 2.03e-21 93.2
MS.gene51407.t1 AT5G11510 34.000 100 64 2 14 112 29 127 8.84e-12 65.1
MS.gene51407.t1 AT5G11510 40.594 101 59 1 14 114 81 180 2.11e-21 93.2
MS.gene51407.t1 AT5G11510 34.000 100 64 2 14 112 29 127 9.19e-12 64.7
MS.gene51407.t1 AT3G23250 61.538 65 23 1 58 122 1 63 3.29e-21 89.0
MS.gene51407.t1 AT1G18960 42.574 101 55 2 14 114 10 107 5.09e-21 90.1
MS.gene51407.t1 AT5G39700 33.835 133 81 2 13 145 55 180 4.45e-20 85.1
MS.gene51407.t1 AT4G00540 41.121 107 57 3 12 114 101 205 3.02e-19 86.3
MS.gene51407.t1 AT4G00540 31.776 107 65 2 14 112 46 152 7.40e-12 64.7
MS.gene51407.t1 AT2G25230 32.759 116 77 1 4 119 16 130 3.24e-19 83.6
MS.gene51407.t1 AT4G00540 41.121 107 57 3 12 114 99 203 4.72e-19 85.9
MS.gene51407.t1 AT4G00540 31.776 107 65 2 14 112 44 150 8.98e-12 64.7
MS.gene51407.t1 AT2G37630 33.750 160 80 4 17 174 7 142 6.76e-19 84.7
MS.gene51407.t1 AT1G71030 51.562 64 31 0 51 114 5 68 1.26e-18 80.9
MS.gene51407.t1 AT1G71030 51.562 64 31 0 51 114 19 82 1.38e-18 81.3
MS.gene51407.t1 AT5G40430 30.973 113 76 2 4 116 44 154 4.09e-15 72.8
MS.gene51407.t1 AT1G14350 30.508 118 77 2 17 130 28 144 1.70e-13 69.7
MS.gene51407.t1 AT1G14350 30.508 118 77 2 17 130 28 144 1.70e-13 69.7
MS.gene51407.t1 AT3G18100 35.052 97 62 1 12 108 544 639 4.13e-13 68.9
MS.gene51407.t1 AT4G25560 68.182 44 14 0 71 114 3 46 4.60e-13 66.6
MS.gene51407.t1 AT3G18100 35.052 97 62 1 12 108 496 591 5.10e-13 68.6
MS.gene51407.t1 AT3G18100 35.052 97 62 1 12 108 331 426 5.24e-13 68.6
MS.gene51407.t1 AT3G18100 35.052 97 62 1 12 108 383 478 5.42e-13 68.6
MS.gene51407.t1 AT5G59780 53.061 49 23 0 71 119 2 50 9.44e-13 64.7
MS.gene51407.t1 AT3G46130 53.061 49 23 0 71 119 2 50 2.52e-12 64.3
MS.gene51407.t1 AT2G02820 32.673 101 67 1 17 117 33 132 9.68e-12 64.7
MS.gene51407.t1 AT2G02820 32.673 101 67 1 17 117 33 132 1.00e-11 63.9
MS.gene51407.t1 AT2G02820 32.673 101 67 1 17 117 33 132 1.11e-11 64.3

Find 42 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATTGTCTTCTGCCATTA+TGG 0.133872 4.1:-53100624 None:intergenic
AGAAACATGGTCATTCTAAT+TGG 0.262456 4.1:+53099226 MS.gene51407:CDS
ATCTCGTGGTCCGTTCTTCC+AGG 0.297659 4.1:-53100353 None:intergenic
TATACTTATTTCCATGTTGA+TGG 0.301927 4.1:-53099793 None:intergenic
CGTCAACTCCCCAAGCTTGC+AGG 0.320716 4.1:+53099249 MS.gene51407:CDS
ACATCAGAGATAGGGATTTC+AGG 0.322596 4.1:-53100503 None:intergenic
TAGTGGTGGAGGTATCTTCT+AGG 0.327386 4.1:-53100703 None:intergenic
TGCCATTATGGGGCAGTTGA+TGG 0.349469 4.1:-53100612 None:intergenic
TAGTTCCCATGTTTAAGATT+TGG 0.354990 4.1:-53099734 None:intergenic
ACATTGTCTTCTGCCATTAT+GGG 0.355335 4.1:-53100623 None:intergenic
CCACTGATGTTTCTCTGGAA+AGG 0.380327 4.1:-53100568 None:intergenic
ATCTTCCACTGATGTTTCTC+TGG 0.388829 4.1:-53100573 None:intergenic
TTCACTTGATATCTCATTAG+TGG 0.392926 4.1:-53100720 None:intergenic
TCCTTATCAACATCAGAGAT+AGG 0.398718 4.1:-53100512 None:intergenic
CACTGATGTTTCTCTGGAAA+GGG 0.401977 4.1:-53100567 None:intergenic
CTCCATCAACTGCCCCATAA+TGG 0.404724 4.1:+53100610 MS.gene51407:CDS
AAACATGTACCTGCAAGCTT+GGG 0.406464 4.1:-53099258 None:intergenic
CCCTATCTCTGATGTTGATA+AGG 0.407461 4.1:+53100511 MS.gene51407:CDS
GAAACATGTACCTGCAAGCT+TGG 0.433847 4.1:-53099259 None:intergenic
TTGATTCCAGACTTCTATGA+TGG 0.449729 4.1:+53100755 MS.gene51407:CDS
ACCACGAGATAAAGAACTAT+TGG 0.463630 4.1:+53100366 MS.gene51407:CDS
TATGAACCATCATAGAAGTC+TGG 0.481873 4.1:-53100761 None:intergenic
AGGTGCATGGAGTAGAGATG+AGG 0.501985 4.1:+53099179 MS.gene51407:CDS
GAGGTATCTTCTAGGGTGCA+TGG 0.502528 4.1:-53100695 None:intergenic
TTCAAAGAGCAAAGACTACA+AGG 0.536362 4.1:+53100409 MS.gene51407:CDS
TGATATCTCATTAGTGGTGG+AGG 0.536390 4.1:-53100714 None:intergenic
AGTGGTGGAGGTATCTTCTA+GGG 0.536504 4.1:-53100702 None:intergenic
CCTTATCAACATCAGAGATA+GGG 0.539139 4.1:-53100511 None:intergenic
GCCAATAGTTCTTTATCTCG+TGG 0.546828 4.1:-53100367 None:intergenic
ATTACAGGTTTAGCAAGATG+TGG 0.556410 4.1:+53099674 MS.gene51407:intron
CATTGTCTTCTGCCATTATG+GGG 0.556590 4.1:-53100622 None:intergenic
TAAAGCCAAATCTTAAACAT+GGG 0.567733 4.1:+53099729 MS.gene51407:CDS
ACTTGATATCTCATTAGTGG+TGG 0.574720 4.1:-53100717 None:intergenic
TTAAAGCCAAATCTTAAACA+TGG 0.576268 4.1:+53099728 MS.gene51407:CDS
GGAGTAGAGATGAGGATACA+AGG 0.600618 4.1:+53099187 MS.gene51407:CDS
CAGAAGACAATGTTGCTCCA+TGG 0.613537 4.1:+53100633 MS.gene51407:CDS
AGTGATTATATTCAGAAACA+TGG 0.618117 4.1:+53099213 MS.gene51407:CDS
CATTATGGGGCAGTTGATGG+AGG 0.624888 4.1:-53100609 None:intergenic
ATGGTGTTAAGAAAGGTGCA+TGG 0.631027 4.1:+53099166 MS.gene51407:CDS
ATCAAATTACACCATCAACA+TGG 0.632200 4.1:+53099782 MS.gene51407:CDS
AACATGTACCTGCAAGCTTG+GGG 0.636122 4.1:-53099257 None:intergenic
CCTTTCCAGAGAAACATCAG+TGG 0.704310 4.1:+53100568 MS.gene51407:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACCAAAATAATATTTTTTTT+AGG + chr4.1:53100130-53100149 MS.gene51407:intron 10.0%
!!! CCAAAATAATATTTTTTTTA+GGG + chr4.1:53100131-53100150 MS.gene51407:intron 10.0%
!!! TACTTAGTTTTATATTATTT+TGG - chr4.1:53100163-53100182 None:intergenic 10.0%
!! AATTTAAGCTTCATTAATTT+AGG + chr4.1:53099603-53099622 MS.gene51407:intron 15.0%
!! TTGTTAATATAATTTCGTTA+GGG + chr4.1:53099366-53099385 MS.gene51407:intron 15.0%
!! TTTAATAAAATATTACCCAT+TGG + chr4.1:53100050-53100069 MS.gene51407:intron 15.0%
!!! ATGTTTATAACTTTGTTTTT+TGG + chr4.1:53099508-53099527 MS.gene51407:intron 15.0%
!!! CCCTAAAAAAAATATTATTT+TGG - chr4.1:53100134-53100153 None:intergenic 15.0%
!!! GACACTTTTTTTATTTTTTA+TGG - chr4.1:53099483-53099502 None:intergenic 15.0%
!! AAATAAACAATGTACTCAAT+AGG - chr4.1:53099964-53099983 None:intergenic 20.0%
!! CAATTATATTTCTTCTTAGA+TGG + chr4.1:53100309-53100328 MS.gene51407:intron 20.0%
!! CTTGTTAATATAATTTCGTT+AGG + chr4.1:53099365-53099384 MS.gene51407:intron 20.0%
!! TGGAATATAGATTAATTAGA+TGG + chr4.1:53100001-53100020 MS.gene51407:intron 20.0%
!! TGTTAATATAATTTCGTTAG+GGG + chr4.1:53099367-53099386 MS.gene51407:intron 20.0%
!!! TTAGTTTTTGAATCATTTAG+TGG + chr4.1:53100656-53100675 MS.gene51407:CDS 20.0%
!!! TTTATTAAACATTCCAGTTT+TGG - chr4.1:53100039-53100058 None:intergenic 20.0%
! AATGATTCAAAAACTAACCA+TGG - chr4.1:53100653-53100672 None:intergenic 25.0%
! AGTGATTATATTCAGAAACA+TGG + chr4.1:53099213-53099232 MS.gene51407:CDS 25.0%
! CTGATTAACGATACTAAAAA+AGG + chr4.1:53099415-53099434 MS.gene51407:intron 25.0%
! TAAAGCCAAATCTTAAACAT+GGG + chr4.1:53099729-53099748 MS.gene51407:CDS 25.0%
! TAATTAATTGCATCTCCAAT+GGG - chr4.1:53100068-53100087 None:intergenic 25.0%
! TATACTTATTTCCATGTTGA+TGG - chr4.1:53099796-53099815 None:intergenic 25.0%
! TTAAAGCCAAATCTTAAACA+TGG + chr4.1:53099728-53099747 MS.gene51407:CDS 25.0%
! TTAACGATACTAAAAAAGGA+AGG + chr4.1:53099419-53099438 MS.gene51407:intron 25.0%
! TTAATTAGGAGACTAACTTA+TGG + chr4.1:53100081-53100100 MS.gene51407:intron 25.0%
!! AATCATTTAGTGGAGATTTT+TGG + chr4.1:53100666-53100685 MS.gene51407:CDS 25.0%
!! TTTTAGCAGTATATTAGATG+TGG + chr4.1:53099981-53100000 MS.gene51407:intron 25.0%
!!! AATCAGTGTTGTTTTATTAC+AGG + chr4.1:53099659-53099678 MS.gene51407:intron 25.0%
!!! GAAGCTTAAATTCTACTTTT+AGG - chr4.1:53099595-53099614 None:intergenic 25.0%
!!! TGCTCTTTGAACATTTTTTT+AGG - chr4.1:53100400-53100419 None:intergenic 25.0%
AGAAACATGGTCATTCTAAT+TGG + chr4.1:53099226-53099245 MS.gene51407:CDS 30.0%
ATCAAATTACACCATCAACA+TGG + chr4.1:53099782-53099801 MS.gene51407:CDS 30.0%
CATTGGAGATGCAATTAATT+AGG + chr4.1:53100067-53100086 MS.gene51407:intron 30.0%
CTAATTAATTGCATCTCCAA+TGG - chr4.1:53100069-53100088 None:intergenic 30.0%
TTCACTTGATATCTCATTAG+TGG - chr4.1:53100723-53100742 None:intergenic 30.0%
! CTAGCTGTTGATTAATTGAA+AGG + chr4.1:53100186-53100205 MS.gene51407:intron 30.0%
! GACAAAAATGGTGTTAAGAA+AGG + chr4.1:53099159-53099178 MS.gene51407:CDS 30.0%
! TAGTTCCCATGTTTAAGATT+TGG - chr4.1:53099737-53099756 None:intergenic 30.0%
! TTTTCTTCAACAGTATCACA+TGG - chr4.1:53100461-53100480 None:intergenic 30.0%
!! ACACCATTTTTGTCATAGAA+AGG - chr4.1:53099153-53099172 None:intergenic 30.0%
!! CTTAAATTCTACTTTTAGGC+GGG - chr4.1:53099591-53099610 None:intergenic 30.0%
!! GCTTAAATTCTACTTTTAGG+CGG - chr4.1:53099592-53099611 None:intergenic 30.0%
AACATTGTCTTCTGCCATTA+TGG - chr4.1:53100627-53100646 None:intergenic 35.0%
ACATTGTCTTCTGCCATTAT+GGG - chr4.1:53100626-53100645 None:intergenic 35.0%
ACCACGAGATAAAGAACTAT+TGG + chr4.1:53100366-53100385 MS.gene51407:CDS 35.0%
ACTTGATATCTCATTAGTGG+TGG - chr4.1:53100720-53100739 None:intergenic 35.0%
AGTATCGTTAATCAGTGTCT+TGG - chr4.1:53099410-53099429 None:intergenic 35.0%
ATTACAGGTTTAGCAAGATG+TGG + chr4.1:53099674-53099693 MS.gene51407:intron 35.0%
CCTTATCAACATCAGAGATA+GGG - chr4.1:53100514-53100533 None:intergenic 35.0%
CGGGATATTCATAACGAAAA+GGG - chr4.1:53099572-53099591 None:intergenic 35.0%
GCTCCTTTCTATGACAAAAA+TGG + chr4.1:53099147-53099166 MS.gene51407:CDS 35.0%
GTGAGATAAAGAACCAAAAC+TGG + chr4.1:53100023-53100042 MS.gene51407:intron 35.0%
TAACCAGTATCTTGAAGCAA+CGG + chr4.1:53099537-53099556 MS.gene51407:intron 35.0%
TATGAACCATCATAGAAGTC+TGG - chr4.1:53100764-53100783 None:intergenic 35.0%
TCCTTATCAACATCAGAGAT+AGG - chr4.1:53100515-53100534 None:intergenic 35.0%
TTCAAAGAGCAAAGACTACA+AGG + chr4.1:53100409-53100428 MS.gene51407:CDS 35.0%
TTGATTCCAGACTTCTATGA+TGG + chr4.1:53100755-53100774 MS.gene51407:CDS 35.0%
! TTGCTTCAAGATACTGGTTA+AGG - chr4.1:53099537-53099556 None:intergenic 35.0%
AAACATGTACCTGCAAGCTT+GGG - chr4.1:53099261-53099280 None:intergenic 40.0%
ACATCAGAGATAGGGATTTC+AGG - chr4.1:53100506-53100525 None:intergenic 40.0%
ATCTTCCACTGATGTTTCTC+TGG - chr4.1:53100576-53100595 None:intergenic 40.0%
CATTGTCTTCTGCCATTATG+GGG - chr4.1:53100625-53100644 None:intergenic 40.0%
CCCTATCTCTGATGTTGATA+AGG + chr4.1:53100511-53100530 MS.gene51407:CDS 40.0%
GAAAAAGTTGCAGACTTCGT+TGG + chr4.1:53099696-53099715 MS.gene51407:CDS 40.0%
GCCAATAGTTCTTTATCTCG+TGG - chr4.1:53100370-53100389 None:intergenic 40.0%
GCGGGATATTCATAACGAAA+AGG - chr4.1:53099573-53099592 None:intergenic 40.0%
TAACCGTTGCTTCAAGATAC+TGG - chr4.1:53099543-53099562 None:intergenic 40.0%
TGAAAAACTGCCTGGAAGAA+CGG + chr4.1:53100343-53100362 MS.gene51407:CDS 40.0%
TGATATCTCATTAGTGGTGG+AGG - chr4.1:53100717-53100736 None:intergenic 40.0%
TTGATTGCTGAAAAACTGCC+TGG + chr4.1:53100335-53100354 MS.gene51407:CDS 40.0%
! ATGGTGTTAAGAAAGGTGCA+TGG + chr4.1:53099166-53099185 MS.gene51407:CDS 40.0%
! CACTGATGTTTCTCTGGAAA+GGG - chr4.1:53100570-53100589 None:intergenic 40.0%
AACATGTACCTGCAAGCTTG+GGG - chr4.1:53099260-53099279 None:intergenic 45.0%
CAGAAGACAATGTTGCTCCA+TGG + chr4.1:53100633-53100652 MS.gene51407:CDS 45.0%
CCTTTCCAGAGAAACATCAG+TGG + chr4.1:53100568-53100587 MS.gene51407:CDS 45.0%
GAAACATGTACCTGCAAGCT+TGG - chr4.1:53099262-53099281 None:intergenic 45.0%
GGAGTAGAGATGAGGATACA+AGG + chr4.1:53099187-53099206 MS.gene51407:CDS 45.0%
TCGTTAGGGGAAATGCTAGT+TGG + chr4.1:53099380-53099399 MS.gene51407:intron 45.0%
! CCACTGATGTTTCTCTGGAA+AGG - chr4.1:53100571-53100590 None:intergenic 45.0%
!! AGTGGTGGAGGTATCTTCTA+GGG - chr4.1:53100705-53100724 None:intergenic 45.0%
!! TAGTGGTGGAGGTATCTTCT+AGG - chr4.1:53100706-53100725 None:intergenic 45.0%
AGGTGCATGGAGTAGAGATG+AGG + chr4.1:53099179-53099198 MS.gene51407:CDS 50.0%
CTCCATCAACTGCCCCATAA+TGG + chr4.1:53100610-53100629 MS.gene51407:CDS 50.0%
TGCCATTATGGGGCAGTTGA+TGG - chr4.1:53100615-53100634 None:intergenic 50.0%
!! CATTATGGGGCAGTTGATGG+AGG - chr4.1:53100612-53100631 None:intergenic 50.0%
!! GAGGTATCTTCTAGGGTGCA+TGG - chr4.1:53100698-53100717 None:intergenic 50.0%
ATCTCGTGGTCCGTTCTTCC+AGG - chr4.1:53100356-53100375 None:intergenic 55.0%
CGTCAACTCCCCAAGCTTGC+AGG + chr4.1:53099249-53099268 MS.gene51407:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 53099138 53100793 53099138 ID=MS.gene51407
chr4.1 mRNA 53099138 53100793 53099138 ID=MS.gene51407.t1;Parent=MS.gene51407
chr4.1 exon 53099138 53099270 53099138 ID=MS.gene51407.t1.exon1;Parent=MS.gene51407.t1
chr4.1 CDS 53099138 53099270 53099138 ID=cds.MS.gene51407.t1;Parent=MS.gene51407.t1
chr4.1 exon 53099681 53099810 53099681 ID=MS.gene51407.t1.exon2;Parent=MS.gene51407.t1
chr4.1 CDS 53099681 53099810 53099681 ID=cds.MS.gene51407.t1;Parent=MS.gene51407.t1
chr4.1 exon 53100328 53100793 53100328 ID=MS.gene51407.t1.exon3;Parent=MS.gene51407.t1
chr4.1 CDS 53100328 53100793 53100328 ID=cds.MS.gene51407.t1;Parent=MS.gene51407.t1
Gene Sequence

>MS.gene51407

ATGGTAAGAGCTCCTTTCTATGACAAAAATGGTGTTAAGAAAGGTGCATGGAGTAGAGATGAGGATACAAGGTTAAGTGATTATATTCAGAAACATGGTCATTCTAATTGGCGTCAACTCCCCAAGCTTGCAGGTACATGTTTCATTCTGTATTTAATTACATACTTATGATTAATGTTAATGATCAATGCTTTTTTGATATATTGATGATCAATGCTTCTGTTTTACTTGTTAATATAATTTCGTTAGGGGAAATGCTAGTTGGTCTTCCAAGACACTGATTAACGATACTAAAAAAGGAAGGTATATAGTAATTATTATATTGAAAATTGTGTAATCAATCCATAAAAAATAAAAAAAGTGTCTTTTTATGTTTATAACTTTGTTTTTTGGTATCCTTAACCAGTATCTTGAAGCAACGGTTATCATGACCCTTTTCGTTATGAATATCCCGCCTAAAAGTAGAATTTAAGCTTCATTAATTTAGGAATTAAGAGTAAGAAATGTAAAAAATATATTTCAATCAGTGTTGTTTTATTACAGGTTTAGCAAGATGTGGAAAAAGTTGCAGACTTCGTTGGTTGAATTACTTAAAGCCAAATCTTAAACATGGGAACTACACAAGCGAAGAAGAAGAAATTATCATCAAATTACACCATCAACATGGAAATAAGTATATGATAAATTTCTAGTTTTGATAACTTTATTCTTCTTTTTCTTTTTTCACAAATTGATAATTTAATTCTAGATTCGAAAAATAATTTATTAAAAAAATGATTTATATATAATAGTCAACTTTAGAGAGCACTAAGATTGCAGTTTTCCTATTGAGTACATTGTTTATTTTAGCAGTATATTAGATGTGGAATATAGATTAATTAGATGGTGAGATAAAGAACCAAAACTGGAATGTTTAATAAAATATTACCCATTGGAGATGCAATTAATTAGGAGACTAACTTATGGATAGAGTTCAATTTAATTTGTGACAAACCAAAATAATATTTTTTTTAGGGAACAAACCAAAATAATATAAAACTAAGTATTGCTAGCTGTTGATTAATTGAAAGGTTATATTTAATCATAGAGACTTGCATAACTTTATTTTCTAGTTGATTTAAGTGTTGACATTATTTTAAAAAAATTATTATTTTTTACAAGTATCTAATTACAATTATATTTCTTCTTAGATGGTCATTGATTGCTGAAAAACTGCCTGGAAGAACGGACCACGAGATAAAGAACTATTGGCATAGTTACCTAAAAAAATGTTCAAAGAGCAAAGACTACAAGGACACAATTTCTGAGTTGATATATAAACCATGTGATACTGTTGAAGAAAATGACACTGATCATTTTGTAACACCTGAAATCCCTATCTCTGATGTTGATAAGGACTTTCATTATATTTTAGAAAGCTCAACAATAACCCTTTCCAGAGAAACATCAGTGGAAGATAAATCTTTAACTGCCTCCATCAACTGCCCCATAATGGCAGAAGACAATGTTGCTCCATGGTTAGTTTTTGAATCATTTAGTGGAGATTTTTGGACTGATCCATGCACCCTAGAAGATACCTCCACCACTAATGAGATATCAAGTGAAGACATAGACTTCTTGATTCCAGACTTCTATGATGGTTCATATATGTTTTAG
Protein sequence

>MS.gene51407.t1

MVRAPFYDKNGVKKGAWSRDEDTRLSDYIQKHGHSNWRQLPKLAGLARCGKSCRLRWLNYLKPNLKHGNYTSEEEEIIIKLHHQHGNKWSLIAEKLPGRTDHEIKNYWHSYLKKCSKSKDYKDTISELIYKPCDTVEENDTDHFVTPEIPISDVDKDFHYILESSTITLSRETSVEDKSLTASINCPIMAEDNVAPWLVFESFSGDFWTDPCTLEDTSTTNEISSEDIDFLIPDFYDGSYMF