Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51505.t1 | XP_003598991.1 | 71.3 | 188 | 12 | 1 | 18 | 163 | 1 | 188 | 4.60E-65 | 258.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51505.t1 | O82796 | 67.4 | 138 | 45 | 0 | 26 | 163 | 49 | 186 | 3.7e-47 | 190.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51505.t1 | G7IZA6 | 71.3 | 188 | 12 | 1 | 18 | 163 | 1 | 188 | 3.3e-65 | 258.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene51505.t1 | TF | GARP-G2-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51505.t1 | MTR_3g025840 | 71.277 | 188 | 12 | 1 | 18 | 163 | 1 | 188 | 2.46e-88 | 268 |
| MS.gene51505.t1 | MTR_3g025840 | 91.892 | 37 | 3 | 0 | 164 | 200 | 84 | 120 | 1.74e-16 | 79.3 |
| MS.gene51505.t1 | MTR_4g098870 | 94.681 | 94 | 5 | 0 | 221 | 314 | 266 | 359 | 2.32e-51 | 179 |
| MS.gene51505.t1 | MTR_4g098870 | 94.681 | 94 | 5 | 0 | 221 | 314 | 286 | 379 | 2.51e-51 | 179 |
| MS.gene51505.t1 | MTR_4g098870 | 94.681 | 94 | 5 | 0 | 221 | 314 | 266 | 359 | 2.70e-51 | 179 |
| MS.gene51505.t1 | MTR_4g098870 | 94.681 | 94 | 5 | 0 | 221 | 314 | 286 | 379 | 3.47e-51 | 179 |
| MS.gene51505.t1 | MTR_4g098870 | 94.681 | 94 | 5 | 0 | 221 | 314 | 305 | 398 | 4.55e-51 | 179 |
| MS.gene51505.t1 | MTR_5g014040 | 63.918 | 97 | 34 | 1 | 221 | 317 | 228 | 323 | 1.72e-28 | 115 |
| MS.gene51505.t1 | MTR_5g014040 | 63.918 | 97 | 34 | 1 | 221 | 317 | 268 | 363 | 1.85e-28 | 115 |
| MS.gene51505.t1 | MTR_5g014040 | 65.957 | 94 | 31 | 1 | 221 | 314 | 268 | 360 | 1.26e-27 | 113 |
| MS.gene51505.t1 | MTR_2g090675 | 46.392 | 97 | 41 | 1 | 218 | 314 | 125 | 210 | 9.46e-20 | 90.1 |
| MS.gene51505.t1 | MTR_4g078810 | 69.231 | 52 | 16 | 0 | 263 | 314 | 156 | 207 | 1.61e-19 | 89.4 |
| MS.gene51505.t1 | MTR_3g106220 | 56.716 | 67 | 28 | 1 | 258 | 323 | 191 | 257 | 2.66e-15 | 77.4 |
| MS.gene51505.t1 | MTR_2g450070 | 65.385 | 52 | 18 | 0 | 263 | 314 | 211 | 262 | 2.81e-15 | 77.4 |
| MS.gene51505.t1 | MTR_2g450070 | 65.385 | 52 | 18 | 0 | 263 | 314 | 211 | 262 | 2.81e-15 | 77.4 |
| MS.gene51505.t1 | MTR_4g131570 | 63.636 | 55 | 20 | 0 | 260 | 314 | 198 | 252 | 5.32e-15 | 76.3 |
| MS.gene51505.t1 | MTR_4g121020 | 56.338 | 71 | 28 | 2 | 264 | 331 | 110 | 180 | 9.78e-15 | 75.5 |
| MS.gene51505.t1 | MTR_4g121020 | 56.338 | 71 | 28 | 2 | 264 | 331 | 214 | 284 | 1.02e-14 | 75.5 |
| MS.gene51505.t1 | MTR_4g121020 | 56.338 | 71 | 28 | 2 | 264 | 331 | 214 | 284 | 1.02e-14 | 75.5 |
| MS.gene51505.t1 | MTR_1g032570 | 59.016 | 61 | 24 | 1 | 264 | 323 | 130 | 190 | 2.48e-14 | 74.3 |
| MS.gene51505.t1 | MTR_1g032570 | 59.016 | 61 | 24 | 1 | 264 | 323 | 199 | 259 | 2.82e-14 | 74.3 |
| MS.gene51505.t1 | MTR_4g131600 | 59.322 | 59 | 21 | 1 | 256 | 314 | 195 | 250 | 4.92e-14 | 73.6 |
| MS.gene51505.t1 | MTR_7g089010 | 49.315 | 73 | 35 | 1 | 244 | 314 | 68 | 140 | 6.79e-14 | 71.6 |
| MS.gene51505.t1 | MTR_4g131580 | 62.963 | 54 | 20 | 0 | 261 | 314 | 196 | 249 | 2.39e-13 | 71.2 |
| MS.gene51505.t1 | MTR_4g064730 | 60.784 | 51 | 20 | 0 | 264 | 314 | 130 | 180 | 2.87e-13 | 70.1 |
| MS.gene51505.t1 | MTR_1g013170 | 52.308 | 65 | 30 | 1 | 260 | 323 | 186 | 250 | 4.15e-13 | 70.5 |
| MS.gene51505.t1 | MTR_3g102590 | 59.259 | 54 | 22 | 0 | 263 | 316 | 141 | 194 | 8.51e-13 | 66.6 |
| MS.gene51505.t1 | MTR_7g117705 | 54.839 | 62 | 27 | 1 | 263 | 323 | 189 | 250 | 1.24e-12 | 68.9 |
| MS.gene51505.t1 | MTR_8g079940 | 58.065 | 62 | 25 | 1 | 264 | 324 | 208 | 269 | 1.68e-12 | 68.6 |
| MS.gene51505.t1 | MTR_3g102590 | 54.688 | 64 | 26 | 1 | 263 | 323 | 141 | 204 | 1.74e-12 | 66.6 |
| MS.gene51505.t1 | MTR_2g034960 | 43.750 | 80 | 39 | 2 | 261 | 334 | 207 | 286 | 1.79e-12 | 68.6 |
| MS.gene51505.t1 | MTR_3g102600 | 57.778 | 45 | 19 | 0 | 270 | 314 | 88 | 132 | 2.52e-12 | 63.9 |
| MS.gene51505.t1 | MTR_1g013180 | 59.615 | 52 | 21 | 0 | 263 | 314 | 340 | 391 | 2.61e-12 | 68.2 |
| MS.gene51505.t1 | MTR_7g026400 | 51.613 | 62 | 29 | 1 | 264 | 324 | 156 | 217 | 4.37e-12 | 67.4 |
| MS.gene51505.t1 | MTR_3g102600 | 57.778 | 45 | 19 | 0 | 270 | 314 | 137 | 181 | 4.88e-12 | 64.3 |
| MS.gene51505.t1 | MTR_3g086100 | 53.968 | 63 | 28 | 1 | 264 | 325 | 127 | 189 | 5.86e-12 | 67.0 |
| MS.gene51505.t1 | MTR_3g086100 | 53.968 | 63 | 28 | 1 | 264 | 325 | 198 | 260 | 6.71e-12 | 67.0 |
| MS.gene51505.t1 | MTR_3g102600 | 57.778 | 45 | 19 | 0 | 270 | 314 | 88 | 132 | 7.30e-12 | 63.9 |
| MS.gene51505.t1 | MTR_4g021760 | 44.776 | 67 | 30 | 1 | 264 | 330 | 168 | 227 | 7.87e-12 | 65.9 |
| MS.gene51505.t1 | MTR_3g102600 | 57.778 | 45 | 19 | 0 | 270 | 314 | 137 | 181 | 1.14e-11 | 64.3 |
| MS.gene51505.t1 | MTR_4g021845 | 48.214 | 56 | 29 | 0 | 260 | 315 | 163 | 218 | 1.39e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51505.t1 | AT1G18640 | 67.391 | 138 | 45 | 0 | 26 | 163 | 49 | 186 | 1.60e-59 | 194 |
| MS.gene51505.t1 | AT1G18640 | 85.714 | 35 | 5 | 0 | 166 | 200 | 84 | 118 | 4.18e-14 | 72.4 |
| MS.gene51505.t1 | AT1G18640 | 67.391 | 138 | 45 | 0 | 26 | 163 | 49 | 186 | 3.05e-59 | 192 |
| MS.gene51505.t1 | AT1G18640 | 85.714 | 35 | 5 | 0 | 166 | 200 | 84 | 118 | 4.70e-14 | 72.0 |
| MS.gene51505.t1 | AT5G44190 | 77.358 | 53 | 12 | 0 | 262 | 314 | 144 | 196 | 9.91e-21 | 92.0 |
| MS.gene51505.t1 | AT5G44190 | 77.358 | 53 | 12 | 0 | 262 | 314 | 144 | 196 | 1.07e-20 | 92.4 |
| MS.gene51505.t1 | AT4G18020 | 84.000 | 50 | 8 | 0 | 265 | 314 | 296 | 345 | 4.00e-20 | 91.7 |
| MS.gene51505.t1 | AT4G18020 | 84.000 | 50 | 8 | 0 | 265 | 314 | 296 | 345 | 4.00e-20 | 91.7 |
| MS.gene51505.t1 | AT4G18020 | 84.000 | 50 | 8 | 0 | 265 | 314 | 296 | 345 | 4.00e-20 | 91.7 |
| MS.gene51505.t1 | AT4G18020 | 84.000 | 50 | 8 | 0 | 265 | 314 | 296 | 345 | 4.00e-20 | 91.7 |
| MS.gene51505.t1 | AT4G18020 | 84.000 | 50 | 8 | 0 | 265 | 314 | 296 | 345 | 4.00e-20 | 91.7 |
| MS.gene51505.t1 | AT4G18020 | 84.000 | 50 | 8 | 0 | 265 | 314 | 296 | 345 | 4.11e-20 | 91.7 |
| MS.gene51505.t1 | AT4G18020 | 84.000 | 50 | 8 | 0 | 265 | 314 | 296 | 345 | 4.11e-20 | 91.7 |
| MS.gene51505.t1 | AT4G18020 | 84.000 | 50 | 8 | 0 | 265 | 314 | 296 | 345 | 4.11e-20 | 91.7 |
| MS.gene51505.t1 | AT4G18020 | 84.000 | 50 | 8 | 0 | 265 | 314 | 296 | 345 | 4.11e-20 | 91.7 |
| MS.gene51505.t1 | AT4G18020 | 84.000 | 50 | 8 | 0 | 265 | 314 | 296 | 345 | 4.11e-20 | 91.7 |
| MS.gene51505.t1 | AT4G18020 | 84.000 | 50 | 8 | 0 | 265 | 314 | 296 | 345 | 4.11e-20 | 91.7 |
| MS.gene51505.t1 | AT2G20570 | 51.948 | 77 | 37 | 0 | 238 | 314 | 126 | 202 | 8.46e-20 | 90.1 |
| MS.gene51505.t1 | AT2G20570 | 58.442 | 77 | 32 | 0 | 238 | 314 | 142 | 218 | 4.59e-19 | 88.2 |
| MS.gene51505.t1 | AT5G58080 | 66.667 | 54 | 18 | 0 | 261 | 314 | 190 | 243 | 8.95e-17 | 82.0 |
| MS.gene51505.t1 | AT2G25180 | 62.903 | 62 | 22 | 1 | 263 | 323 | 193 | 254 | 6.94e-15 | 76.3 |
| MS.gene51505.t1 | AT2G01760 | 59.016 | 61 | 24 | 1 | 264 | 323 | 134 | 194 | 2.01e-14 | 73.6 |
| MS.gene51505.t1 | AT2G40970 | 46.835 | 79 | 42 | 0 | 236 | 314 | 76 | 154 | 2.13e-14 | 72.4 |
| MS.gene51505.t1 | AT2G01760 | 59.016 | 61 | 24 | 1 | 264 | 323 | 199 | 259 | 4.15e-14 | 73.2 |
| MS.gene51505.t1 | AT2G01760 | 59.016 | 61 | 24 | 1 | 264 | 323 | 227 | 287 | 4.84e-14 | 73.2 |
| MS.gene51505.t1 | AT3G10760 | 42.857 | 91 | 51 | 1 | 230 | 319 | 70 | 160 | 6.57e-14 | 72.0 |
| MS.gene51505.t1 | AT5G05090 | 60.784 | 51 | 20 | 0 | 264 | 314 | 80 | 130 | 7.16e-14 | 71.2 |
| MS.gene51505.t1 | AT5G59570 | 60.784 | 51 | 20 | 0 | 264 | 314 | 140 | 190 | 8.27e-14 | 71.6 |
| MS.gene51505.t1 | AT5G59570 | 60.784 | 51 | 20 | 0 | 264 | 314 | 140 | 190 | 8.27e-14 | 71.6 |
| MS.gene51505.t1 | AT4G31920 | 41.573 | 89 | 51 | 1 | 253 | 340 | 171 | 259 | 9.33e-14 | 72.8 |
| MS.gene51505.t1 | AT3G16857 | 51.316 | 76 | 31 | 2 | 264 | 333 | 166 | 241 | 1.31e-13 | 72.4 |
| MS.gene51505.t1 | AT3G16857 | 51.316 | 76 | 31 | 2 | 264 | 333 | 236 | 311 | 1.34e-13 | 72.4 |
| MS.gene51505.t1 | AT3G16857 | 51.316 | 76 | 31 | 2 | 264 | 333 | 236 | 311 | 1.37e-13 | 72.4 |
| MS.gene51505.t1 | AT3G46640 | 60.784 | 51 | 20 | 0 | 264 | 314 | 143 | 193 | 1.67e-13 | 70.9 |
| MS.gene51505.t1 | AT3G46640 | 60.784 | 51 | 20 | 0 | 264 | 314 | 143 | 193 | 1.67e-13 | 70.9 |
| MS.gene51505.t1 | AT3G46640 | 60.784 | 51 | 20 | 0 | 264 | 314 | 143 | 193 | 2.03e-13 | 70.5 |
| MS.gene51505.t1 | AT5G49240 | 54.386 | 57 | 24 | 1 | 264 | 318 | 222 | 278 | 6.74e-12 | 65.9 |
Find 56 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCATTAGCCTTTAGTTTC+TGG | 0.105326 | 3.4:+2778914 | None:intergenic |
| CGCTATTCCTTCTCGAATAT+TGG | 0.160903 | 3.4:-2777729 | MS.gene51505:CDS |
| TTGATGATGGATAGAAATTC+TGG | 0.271373 | 3.4:-2779940 | MS.gene51505:intron |
| ATCAGAACCAAATCTCAAAA+AGG | 0.281473 | 3.4:-2781050 | MS.gene51505:CDS |
| GTAATGACATTTACACGAAC+TGG | 0.320424 | 3.4:+2781100 | None:intergenic |
| TGATATTCATATATCTTCAT+AGG | 0.343827 | 3.4:-2777580 | MS.gene51505:CDS |
| ATGGAAGCTTTGATCAGTTA+TGG | 0.352182 | 3.4:-2781130 | MS.gene51505:CDS |
| TGTTATATTTCACAGAGAAA+TGG | 0.368768 | 3.4:-2779722 | MS.gene51505:intron |
| TAATGTGGCAAGCCATCTTC+AGG | 0.386166 | 3.4:-2777675 | MS.gene51505:CDS |
| GTTATATTTCACAGAGAAAT+GGG | 0.403915 | 3.4:-2779721 | MS.gene51505:intron |
| TTGAGGAAGCCTTGGCTGCT+AGG | 0.404143 | 3.4:-2779684 | MS.gene51505:CDS |
| TGGAAGCTTTGATCAGTTAT+GGG | 0.406259 | 3.4:-2781129 | MS.gene51505:CDS |
| TTGTTTAGAACCTTCACATT+TGG | 0.411730 | 3.4:+2778066 | None:intergenic |
| AAGCATGTATATCTGATCTC+AGG | 0.425358 | 3.4:-2778892 | MS.gene51505:CDS |
| AATGTGAGATAAAAGCTATT+CGG | 0.442989 | 3.4:-2777993 | MS.gene51505:CDS |
| TGGATTAACTCTTCAATGCC+AGG | 0.447873 | 3.4:+2778934 | None:intergenic |
| TGTGGATAGCACTGTGTGCC+TGG | 0.453183 | 3.4:-2779883 | MS.gene51505:CDS |
| GCAGCCAAGGCTTCCTCAAA+AGG | 0.454284 | 3.4:+2779688 | None:intergenic |
| ATCCAGAAACTAAAGGCTAA+TGG | 0.487422 | 3.4:-2778916 | MS.gene51505:CDS |
| CAGGAAAGGCTGCTGCAGAC+TGG | 0.491347 | 3.4:-2778630 | MS.gene51505:CDS |
| AATGTTGGATCTACGATCCA+TGG | 0.500572 | 3.4:+2781172 | None:intergenic |
| TACTTTGGTCTCAGGTAGAC+TGG | 0.503714 | 3.4:-2777808 | MS.gene51505:intron |
| ACAACATTTGCAAATAAAGT+AGG | 0.507830 | 3.4:-2778030 | MS.gene51505:CDS |
| GGATAGAAATTCTGGAGCTA+TGG | 0.509058 | 3.4:-2779932 | MS.gene51505:intron |
| AGATTTGGTTCTGATTCAAA+CGG | 0.510847 | 3.4:+2781058 | None:intergenic |
| CTGGAAAAGCTGTTGCAGAA+TGG | 0.516312 | 3.4:-2779824 | MS.gene51505:CDS |
| CAAAGATAACCTAGCAGCCA+AGG | 0.517140 | 3.4:+2779675 | None:intergenic |
| AATATTGGATCTAATGAAAG+TGG | 0.519493 | 3.4:-2777714 | MS.gene51505:CDS |
| ATTCTGGAGCTATGGAAGAA+TGG | 0.524311 | 3.4:-2779924 | MS.gene51505:CDS |
| GGTTAGAGATGGAGATTCCA+TGG | 0.524678 | 3.4:-2781189 | None:intergenic |
| TTAATATGCAGACTTTCCCC+TGG | 0.526357 | 3.4:-2778952 | MS.gene51505:intron |
| AGAGTTAATCCAGAAACTAA+AGG | 0.527183 | 3.4:-2778923 | MS.gene51505:CDS |
| CTGCTGCAGACTGGACTGCT+AGG | 0.535922 | 3.4:-2778621 | MS.gene51505:intron |
| TAATGACATTTACACGAACT+GGG | 0.538618 | 3.4:+2781101 | None:intergenic |
| TTCTTCAGCAAAGGCCGCCA+AGG | 0.539397 | 3.4:-2779621 | MS.gene51505:intron |
| ATTAGATCCAATATTCGAGA+AGG | 0.541398 | 3.4:+2777722 | None:intergenic |
| GGATTAACTCTTCAATGCCA+GGG | 0.542136 | 3.4:+2778935 | None:intergenic |
| TACTGCTATGCACTTCATCA+TGG | 0.553245 | 3.4:+2778265 | None:intergenic |
| GCTCGTCAATTCCTTCATCC+AGG | 0.561151 | 3.4:+2779865 | None:intergenic |
| AGCACTGTGTGCCTGGATGA+AGG | 0.562491 | 3.4:-2779876 | MS.gene51505:CDS |
| GGTAGATTATAACCTGAAGA+TGG | 0.564115 | 3.4:+2777663 | None:intergenic |
| ACCACAGTTACCAAATGTGA+AGG | 0.574268 | 3.4:-2778076 | MS.gene51505:CDS |
| GTGAAGGCAGTGGAGCAACT+AGG | 0.575398 | 3.4:-2777761 | MS.gene51505:CDS |
| GGTTATAATCTACCTTCCCA+CGG | 0.590624 | 3.4:-2777654 | MS.gene51505:CDS |
| TGGTCTCAATCATACCTTGG+CGG | 0.591563 | 3.4:+2779607 | None:intergenic |
| AGCACTGTGTGCATTGATGA+AGG | 0.592504 | 3.4:-2778682 | MS.gene51505:CDS |
| ACCTTCACATTTGGTAACTG+TGG | 0.592713 | 3.4:+2778075 | None:intergenic |
| AGCATGTATATCTGATCTCA+GGG | 0.595432 | 3.4:-2778891 | MS.gene51505:CDS |
| ATTGGATCTAATGAAAGTGG+AGG | 0.613074 | 3.4:-2777711 | MS.gene51505:CDS |
| TGATGCAGTGTGCTTTGATG+TGG | 0.622176 | 3.4:-2778707 | MS.gene51505:CDS |
| TGATGCAGTGTGCTTTGATG+TGG | 0.622176 | 3.4:-2779901 | MS.gene51505:CDS |
| GGGCTTGACAAGGCATAATG+TGG | 0.631155 | 3.4:-2777690 | MS.gene51505:CDS |
| TTGGATCTAATGAAAGTGGA+GGG | 0.637148 | 3.4:-2777710 | MS.gene51505:CDS |
| TGAAAGTGGAGGGCTTGACA+AGG | 0.644049 | 3.4:-2777700 | MS.gene51505:CDS |
| ATATTTCACAGAGAAATGGG+TGG | 0.677508 | 3.4:-2779718 | MS.gene51505:intron |
| GATTAACTCTTCAATGCCAG+GGG | 0.679834 | 3.4:+2778936 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATTTTTTTTTTTGATAAA+TGG | - | chr3.4:2780176-2780195 | MS.gene51505:intron | 10.0% |
| !!! | GATATTTTTTTTATTATCTA+TGG | - | chr3.4:2777876-2777895 | MS.gene51505:intron | 10.0% |
| !!! | TTTATATTTTTGAATTTCTT+TGG | - | chr3.4:2780199-2780218 | MS.gene51505:intron | 10.0% |
| !!! | AAAAACTACTACAATTTTTA+TGG | - | chr3.4:2780020-2780039 | MS.gene51505:intron | 15.0% |
| !!! | AGTTGTAATGATTATTTTTT+TGG | - | chr3.4:2779922-2779941 | MS.gene51505:CDS | 15.0% |
| !!! | TGATATATTTAATTTTACCA+TGG | - | chr3.4:2778540-2778559 | MS.gene51505:intron | 15.0% |
| !!! | TTAAGAATTTTATAAACCTT+TGG | + | chr3.4:2777851-2777870 | None:intergenic | 15.0% |
| !!! | TTTATGTTTTTGAATTTCTT+TGG | - | chr3.4:2779004-2779023 | MS.gene51505:intron | 15.0% |
| !! | AAAACTGTATTAAGAAAATC+AGG | + | chr3.4:2780928-2780947 | None:intergenic | 20.0% |
| !! | CATAAAAAACTATTATGTTG+AGG | - | chr3.4:2778294-2778313 | MS.gene51505:CDS | 20.0% |
| !! | TACTGTTATAGTATATTCTA+GGG | + | chr3.4:2779601-2779620 | None:intergenic | 20.0% |
| !! | TGATATTCATATATCTTCAT+AGG | - | chr3.4:2781178-2781197 | MS.gene51505:CDS | 20.0% |
| !!! | AAAATATCATTAGAAGTGTA+GGG | + | chr3.4:2779395-2779414 | None:intergenic | 20.0% |
| !!! | AAGTGTATTTTTAGTATCAA+TGG | + | chr3.4:2778651-2778670 | None:intergenic | 20.0% |
| !!! | ATTAATTACAGTTTTGAATG+AGG | + | chr3.4:2781151-2781170 | None:intergenic | 20.0% |
| !!! | CATATCCTTTTAAAATTAGT+GGG | - | chr3.4:2780594-2780613 | MS.gene51505:intron | 20.0% |
| !!! | TAAAATATCATTAGAAGTGT+AGG | + | chr3.4:2779396-2779415 | None:intergenic | 20.0% |
| !!! | TGATTTTCTTAATACAGTTT+TGG | - | chr3.4:2780927-2780946 | MS.gene51505:intron | 20.0% |
| ! | AAATAACGATATACGGAAAT+TGG | + | chr3.4:2780548-2780567 | None:intergenic | 25.0% |
| ! | AACATGACATGGAAAATATA+GGG | - | chr3.4:2780368-2780387 | MS.gene51505:intron | 25.0% |
| ! | AACATTATGAGAAGAATGAA+TGG | + | chr3.4:2780817-2780836 | None:intergenic | 25.0% |
| ! | AAGCATGAAATAACGATATA+CGG | + | chr3.4:2780555-2780574 | None:intergenic | 25.0% |
| ! | AATATTGGATCTAATGAAAG+TGG | - | chr3.4:2781044-2781063 | MS.gene51505:intron | 25.0% |
| ! | AATGTGAGATAAAAGCTATT+CGG | - | chr3.4:2780765-2780784 | MS.gene51505:intron | 25.0% |
| ! | ACAACATTTGCAAATAAAGT+AGG | - | chr3.4:2780728-2780747 | MS.gene51505:intron | 25.0% |
| ! | AGAAAATAAAGTAGGTAGTT+AGG | + | chr3.4:2779705-2779724 | None:intergenic | 25.0% |
| ! | AGAGTAATTCTCAATGTTAT+TGG | - | chr3.4:2778756-2778775 | MS.gene51505:intron | 25.0% |
| ! | ATAACCATCCAAAACTTTAA+AGG | - | chr3.4:2779439-2779458 | MS.gene51505:intron | 25.0% |
| ! | CTACTGTTATAGTATATTCT+AGG | + | chr3.4:2779602-2779621 | None:intergenic | 25.0% |
| ! | GAATATAACCTTATACAACA+TGG | + | chr3.4:2780879-2780898 | None:intergenic | 25.0% |
| ! | GTTATATTTCACAGAGAAAT+GGG | - | chr3.4:2779037-2779056 | MS.gene51505:intron | 25.0% |
| ! | TAACCATCCAAAACTTTAAA+GGG | - | chr3.4:2779440-2779459 | MS.gene51505:intron | 25.0% |
| ! | TGGTAGATAGAGAAATATAA+TGG | - | chr3.4:2778560-2778579 | MS.gene51505:intron | 25.0% |
| ! | TGTTATATTTCACAGAGAAA+TGG | - | chr3.4:2779036-2779055 | MS.gene51505:intron | 25.0% |
| ! | TTATATTTCTCTATCTACCA+TGG | + | chr3.4:2778560-2778579 | None:intergenic | 25.0% |
| ! | TTCGTCAAATAATCAATGTA+TGG | - | chr3.4:2779894-2779913 | MS.gene51505:CDS | 25.0% |
| ! | TTGTTTATCCATGTTGTATA+AGG | - | chr3.4:2780868-2780887 | MS.gene51505:intron | 25.0% |
| ! | TTTAAAAGGATATGGTCTAT+CGG | + | chr3.4:2780588-2780607 | None:intergenic | 25.0% |
| !! | ATTAGCCCACTAATTTTAAA+AGG | + | chr3.4:2780602-2780621 | None:intergenic | 25.0% |
| !! | ATTTGTTGAATTTCATCATG+GGG | - | chr3.4:2778395-2778414 | MS.gene51505:intron | 25.0% |
| !! | CTACAATTTTTATGGAAGAA+TGG | - | chr3.4:2780028-2780047 | MS.gene51505:intron | 25.0% |
| !! | GAATTTTATAAACCTTTGGA+AGG | + | chr3.4:2777847-2777866 | None:intergenic | 25.0% |
| !! | TATATCGTTATTTCATGCTT+TGG | - | chr3.4:2780555-2780574 | MS.gene51505:intron | 25.0% |
| !! | TTGAAAATTTTCTTCAGCAA+AGG | - | chr3.4:2779128-2779147 | MS.gene51505:intron | 25.0% |
| !! | TTGAATTTTCACATAGCAAT+GGG | - | chr3.4:2780251-2780270 | MS.gene51505:intron | 25.0% |
| !!! | CCACTAATTTTAAAAGGATA+TGG | + | chr3.4:2780596-2780615 | None:intergenic | 25.0% |
| !!! | CCATATCCTTTTAAAATTAG+TGG | - | chr3.4:2780593-2780612 | MS.gene51505:intron | 25.0% |
| !!! | GACAACAGGATTTTAATTAA+AGG | + | chr3.4:2778336-2778355 | None:intergenic | 25.0% |
| !!! | GATTTGTTGAATTTCATCAT+GGG | - | chr3.4:2778394-2778413 | MS.gene51505:intron | 25.0% |
| !!! | TGAGGTATTGAAATAGTTTT+TGG | + | chr3.4:2781133-2781152 | None:intergenic | 25.0% |
| !!! | TGATTTGTTGAATTTCATCA+TGG | - | chr3.4:2778393-2778412 | MS.gene51505:intron | 25.0% |
| !!! | TTAATACAGTTTTGGTACTT+TGG | - | chr3.4:2780935-2780954 | MS.gene51505:intron | 25.0% |
| AAATTGATGAATGGTGTAGA+GGG | - | chr3.4:2780343-2780362 | MS.gene51505:intron | 30.0% | |
| AGAGTTAATCCAGAAACTAA+AGG | - | chr3.4:2779835-2779854 | MS.gene51505:CDS | 30.0% | |
| AGTGAGAAGACAAAAAATGT+TGG | + | chr3.4:2777604-2777623 | None:intergenic | 30.0% | |
| ATCAGAACCAAATCTCAAAA+AGG | - | chr3.4:2777708-2777727 | MS.gene51505:CDS | 30.0% | |
| ATGAACATATTGTCATCTGA+AGG | - | chr3.4:2778684-2778703 | MS.gene51505:CDS | 30.0% | |
| ATTAGATCCAATATTCGAGA+AGG | + | chr3.4:2781039-2781058 | None:intergenic | 30.0% | |
| CAACATGACATGGAAAATAT+AGG | - | chr3.4:2780367-2780386 | MS.gene51505:intron | 30.0% | |
| CAATGAACAGTGTGAAATAA+CGG | + | chr3.4:2780851-2780870 | None:intergenic | 30.0% | |
| GAAAGCAGAGAAAATAAAGT+AGG | + | chr3.4:2779713-2779732 | None:intergenic | 30.0% | |
| GCAAAGTTAGATTGTTCAAA+TGG | - | chr3.4:2778960-2778979 | MS.gene51505:intron | 30.0% | |
| GGAAACTTGAAATTGATGAA+TGG | - | chr3.4:2780334-2780353 | MS.gene51505:intron | 30.0% | |
| TAATGACATTTACACGAACT+GGG | + | chr3.4:2777660-2777679 | None:intergenic | 30.0% | |
| TCAAAAATTGAAGAAGTCAC+TGG | + | chr3.4:2780441-2780460 | None:intergenic | 30.0% | |
| TCAGAACCAAATCTCAAAAA+GGG | - | chr3.4:2777709-2777728 | MS.gene51505:CDS | 30.0% | |
| TGAACATATTGTCATCTGAA+GGG | - | chr3.4:2778685-2778704 | MS.gene51505:CDS | 30.0% | |
| TTTGTTGAATTTCATCATGG+GGG | - | chr3.4:2778396-2778415 | MS.gene51505:intron | 30.0% | |
| ! | AACCATCCAAAACTTTAAAG+GGG | - | chr3.4:2779441-2779460 | MS.gene51505:intron | 30.0% |
| ! | GAAGTTTTCTCCTTTGATTA+TGG | - | chr3.4:2777771-2777790 | MS.gene51505:CDS | 30.0% |
| ! | GTTGAATTTTCACATAGCAA+TGG | - | chr3.4:2780250-2780269 | MS.gene51505:intron | 30.0% |
| ! | TTGTTTAGAACCTTCACATT+TGG | + | chr3.4:2780695-2780714 | None:intergenic | 30.0% |
| !! | AAATAGTTTTTGGAAACCGT+GGG | + | chr3.4:2781123-2781142 | None:intergenic | 30.0% |
| !! | AGATTTGGTTCTGATTCAAA+CGG | + | chr3.4:2777703-2777722 | None:intergenic | 30.0% |
| !! | AGTTGGTCATTTTGAGAATA+TGG | - | chr3.4:2777819-2777838 | MS.gene51505:intron | 30.0% |
| !! | ATTGGCTTCTATGTTTTCTT+GGG | - | chr3.4:2778774-2778793 | MS.gene51505:intron | 30.0% |
| !! | CAATTTCAAGTTTCCATAGA+GGG | + | chr3.4:2780329-2780348 | None:intergenic | 30.0% |
| !! | TCAATTTCAAGTTTCCATAG+AGG | + | chr3.4:2780330-2780349 | None:intergenic | 30.0% |
| !! | TTGATGATGGATAGAAATTC+TGG | - | chr3.4:2778818-2778837 | MS.gene51505:intron | 30.0% |
| !!! | AAAACACCCCTTTAAAGTTT+TGG | + | chr3.4:2779450-2779469 | None:intergenic | 30.0% |
| !!! | ATTTTCAAGTTGAGACATAG+AGG | + | chr3.4:2779116-2779135 | None:intergenic | 30.0% |
| !!! | GGAAATTCTGTTTTGAGAAA+TGG | - | chr3.4:2778981-2779000 | MS.gene51505:intron | 30.0% |
| !!! | TATTGGCTTCTATGTTTTCT+TGG | - | chr3.4:2778773-2778792 | MS.gene51505:intron | 30.0% |
| !!! | TTTCTGTGTTGTTTTGATGA+TGG | - | chr3.4:2778805-2778824 | MS.gene51505:intron | 30.0% |
| !!! | TTTTCAAGTTGAGACATAGA+GGG | + | chr3.4:2779115-2779134 | None:intergenic | 30.0% |
| AAATTGGGGTTCAAACAAAG+TGG | + | chr3.4:2778119-2778138 | None:intergenic | 35.0% | |
| AAGCATGTATATCTGATCTC+AGG | - | chr3.4:2779866-2779885 | MS.gene51505:CDS | 35.0% | |
| AATTGATGAATGGTGTAGAG+GGG | - | chr3.4:2780344-2780363 | MS.gene51505:intron | 35.0% | |
| ACACTGAAAACAAAATCAGC+TGG | + | chr3.4:2779174-2779193 | None:intergenic | 35.0% | |
| ACTGTTGGAAATTGACAAGT+TGG | - | chr3.4:2777802-2777821 | MS.gene51505:intron | 35.0% | |
| AGCATGTATATCTGATCTCA+GGG | - | chr3.4:2779867-2779886 | MS.gene51505:CDS | 35.0% | |
| AGTGCATAGCAGTAAGATAT+TGG | - | chr3.4:2780502-2780521 | MS.gene51505:intron | 35.0% | |
| ATATAGTGTCCACTAGAAAG+CGG | - | chr3.4:2777975-2777994 | MS.gene51505:intron | 35.0% | |
| ATATTTCACAGAGAAATGGG+TGG | - | chr3.4:2779040-2779059 | MS.gene51505:intron | 35.0% | |
| ATCCAGAAACTAAAGGCTAA+TGG | - | chr3.4:2779842-2779861 | MS.gene51505:CDS | 35.0% | |
| ATTGGATCTAATGAAAGTGG+AGG | - | chr3.4:2781047-2781066 | MS.gene51505:intron | 35.0% | |
| CAAAAAATTTGTGAAGGCAG+TGG | - | chr3.4:2780987-2781006 | MS.gene51505:intron | 35.0% | |
| CAATTATATCCGCTTTCTAG+TGG | + | chr3.4:2777987-2778006 | None:intergenic | 35.0% | |
| CAGTTAGACTGCATTTACAA+GGG | + | chr3.4:2779538-2779557 | None:intergenic | 35.0% | |
| CGGACAATGTCAATATTGTT+AGG | - | chr3.4:2778026-2778045 | MS.gene51505:CDS | 35.0% | |
| CTATTATGTTGAGGTCTAGA+TGG | - | chr3.4:2778303-2778322 | MS.gene51505:intron | 35.0% | |
| CTGGTCAATTCAGACATATT+TGG | - | chr3.4:2779763-2779782 | MS.gene51505:intron | 35.0% | |
| GAAATTGATGAATGGTGTAG+AGG | - | chr3.4:2780342-2780361 | MS.gene51505:intron | 35.0% | |
| GAACATATTGTCATCTGAAG+GGG | - | chr3.4:2778686-2778705 | MS.gene51505:CDS | 35.0% | |
| GAATAAAACATGTCGACAAC+AGG | + | chr3.4:2778350-2778369 | None:intergenic | 35.0% | |
| GCTGCACAAAAAATTTGTGA+AGG | - | chr3.4:2780981-2781000 | MS.gene51505:intron | 35.0% | |
| GGTACGTTTGGATTTCAAAT+TGG | - | chr3.4:2777730-2777749 | MS.gene51505:CDS | 35.0% | |
| GGTAGATTATAACCTGAAGA+TGG | + | chr3.4:2781098-2781117 | None:intergenic | 35.0% | |
| GGTCTAGCAAAAAAATAACC+TGG | + | chr3.4:2779635-2779654 | None:intergenic | 35.0% | |
| GTAATGACATTTACACGAAC+TGG | + | chr3.4:2777661-2777680 | None:intergenic | 35.0% | |
| TAAAGTAGGTAGTTAGGCTT+TGG | + | chr3.4:2779699-2779718 | None:intergenic | 35.0% | |
| TAAATGCAGTCTAACTGGTA+AGG | - | chr3.4:2779541-2779560 | MS.gene51505:intron | 35.0% | |
| TCAATGTAGCTTCATGACTT+AGG | - | chr3.4:2779230-2779249 | MS.gene51505:intron | 35.0% | |
| TCTGCCAAGTTAAAAGTCTA+AGG | + | chr3.4:2779329-2779348 | None:intergenic | 35.0% | |
| TTGGATCTAATGAAAGTGGA+GGG | - | chr3.4:2781048-2781067 | MS.gene51505:intron | 35.0% | |
| ! | AAAGTCTAAGGCAAGAGAAA+TGG | + | chr3.4:2779317-2779336 | None:intergenic | 35.0% |
| ! | AAGTCTAAGGCAAGAGAAAT+GGG | + | chr3.4:2779316-2779335 | None:intergenic | 35.0% |
| ! | AATCTCAAAAAGGGTACGTT+TGG | - | chr3.4:2777718-2777737 | MS.gene51505:CDS | 35.0% |
| ! | AATTTTCACATAGCAATGGG+TGG | - | chr3.4:2780254-2780273 | MS.gene51505:intron | 35.0% |
| ! | ACTTTGTTTGAACCCCAATT+TGG | - | chr3.4:2778118-2778137 | MS.gene51505:intron | 35.0% |
| ! | ATGGAAGCTTTGATCAGTTA+TGG | - | chr3.4:2777628-2777647 | MS.gene51505:CDS | 35.0% |
| ! | ATTTTTGTTCGATCCCTCTA+TGG | - | chr3.4:2780313-2780332 | MS.gene51505:intron | 35.0% |
| ! | TGGAAGCTTTGATCAGTTAT+GGG | - | chr3.4:2777629-2777648 | MS.gene51505:CDS | 35.0% |
| ! | TTTTGTCTTCTCACTGTACA+TGG | - | chr3.4:2777609-2777628 | MS.gene51505:CDS | 35.0% |
| ! | TTTTTGTCTCGTCAGAGTTT+TGG | + | chr3.4:2779660-2779679 | None:intergenic | 35.0% |
| !! | AGTTAAGGAGTGGATTGATA+AGG | - | chr3.4:2778161-2778180 | MS.gene51505:intron | 35.0% |
| !! | CTTGCCTTAGACTTTTAACT+TGG | - | chr3.4:2779322-2779341 | MS.gene51505:intron | 35.0% |
| !! | GAAATAGTTTTTGGAAACCG+TGG | + | chr3.4:2781124-2781143 | None:intergenic | 35.0% |
| !! | GTAATCACGTTAAGTTGATC+AGG | - | chr3.4:2779277-2779296 | MS.gene51505:intron | 35.0% |
| !!! | AAAGGGGTGTTTTGATTCAA+CGG | - | chr3.4:2779457-2779476 | MS.gene51505:intron | 35.0% |
| !!! | AACGTACCCTTTTTGAGATT+TGG | + | chr3.4:2777718-2777737 | None:intergenic | 35.0% |
| !!! | ACAAATTTTTTGTGCAGCTC+TGG | + | chr3.4:2780979-2780998 | None:intergenic | 35.0% |
| AAGGCAGCATACTATAGACT+TGG | - | chr3.4:2779560-2779579 | MS.gene51505:intron | 40.0% | |
| AATGTTGGATCTACGATCCA+TGG | + | chr3.4:2777589-2777608 | None:intergenic | 40.0% | |
| ACCACAGTTACCAAATGTGA+AGG | - | chr3.4:2780682-2780701 | MS.gene51505:intron | 40.0% | |
| ATGTCTGAATTGACCAGTTC+AGG | + | chr3.4:2779760-2779779 | None:intergenic | 40.0% | |
| CCAGTTAGACTGCATTTACA+AGG | + | chr3.4:2779539-2779558 | None:intergenic | 40.0% | |
| CCTTGTAAATGCAGTCTAAC+TGG | - | chr3.4:2779536-2779555 | MS.gene51505:intron | 40.0% | |
| CGCTATTCCTTCTCGAATAT+TGG | - | chr3.4:2781029-2781048 | MS.gene51505:intron | 40.0% | |
| CGGAGAATCACAGTTAAATG+TGG | - | chr3.4:2778231-2778250 | MS.gene51505:intron | 40.0% | |
| GAGAATATGGTTCCTTCCAA+AGG | - | chr3.4:2777832-2777851 | MS.gene51505:intron | 40.0% | |
| GATTAACTCTTCAATGCCAG+GGG | + | chr3.4:2779825-2779844 | None:intergenic | 40.0% | |
| GCTAGGTTAGATTGTTCAGA+TGG | - | chr3.4:2780154-2780173 | MS.gene51505:intron | 40.0% | |
| GGATTAACTCTTCAATGCCA+GGG | + | chr3.4:2779826-2779845 | None:intergenic | 40.0% | |
| GGTTATAATCTACCTTCCCA+CGG | - | chr3.4:2781104-2781123 | MS.gene51505:CDS | 40.0% | |
| TACTGCTATGCACTTCATCA+TGG | + | chr3.4:2780496-2780515 | None:intergenic | 40.0% | |
| TCTCCTATTGTATCCTGAAC+TGG | - | chr3.4:2779744-2779763 | MS.gene51505:intron | 40.0% | |
| TGACCAGTTCAGGATACAAT+AGG | + | chr3.4:2779750-2779769 | None:intergenic | 40.0% | |
| TGGATTAACTCTTCAATGCC+AGG | + | chr3.4:2779827-2779846 | None:intergenic | 40.0% | |
| TGTCGCGGTCTTTGATATTA+CGG | - | chr3.4:2778211-2778230 | MS.gene51505:intron | 40.0% | |
| TTAATATGCAGACTTTCCCC+TGG | - | chr3.4:2779806-2779825 | MS.gene51505:intron | 40.0% | |
| ! | ACCTTCACATTTGGTAACTG+TGG | + | chr3.4:2780686-2780705 | None:intergenic | 40.0% |
| ! | AGTCTAAGGCAAGAGAAATG+GGG | + | chr3.4:2779315-2779334 | None:intergenic | 40.0% |
| ! | GGAGTATTTCGCTTTCGATT+TGG | - | chr3.4:2779251-2779270 | MS.gene51505:intron | 40.0% |
| !! | AACAGTAGCTTTGTTGAACC+AGG | - | chr3.4:2779614-2779633 | MS.gene51505:intron | 40.0% |
| !! | AATTTCATCATGGGGGTGTT+TGG | - | chr3.4:2778403-2778422 | MS.gene51505:intron | 40.0% |
| !! | AGTTTTGGTACTTTGGTCTC+AGG | - | chr3.4:2780942-2780961 | MS.gene51505:intron | 40.0% |
| !! | ATTCTGGAGCTATGGAAGAA+TGG | - | chr3.4:2778834-2778853 | MS.gene51505:intron | 40.0% |
| !! | GGATAGAAATTCTGGAGCTA+TGG | - | chr3.4:2778826-2778845 | MS.gene51505:intron | 40.0% |
| !! | TAAGGAGTGGATTGATAAGG+AGG | - | chr3.4:2778164-2778183 | MS.gene51505:intron | 40.0% |
| !! | TGCCATTAGCCTTTAGTTTC+TGG | + | chr3.4:2779847-2779866 | None:intergenic | 40.0% |
| !! | TGTTCCTTTTGAGGAAGCAT+TGG | - | chr3.4:2780280-2780299 | MS.gene51505:intron | 40.0% |
| !! | TTTAACTTGGCAGAGCTGAA+AGG | - | chr3.4:2779335-2779354 | MS.gene51505:intron | 40.0% |
| !!! | ACGAGCTTGCTGAATTTTGT+GGG | - | chr3.4:2778910-2778929 | MS.gene51505:CDS | 40.0% |
| !!! | ATGAGCTTGCTGAATTTTGC+GGG | - | chr3.4:2780104-2780123 | MS.gene51505:intron | 40.0% |
| !!! | CACCCCTTTAAAGTTTTGGA+TGG | + | chr3.4:2779446-2779465 | None:intergenic | 40.0% |
| !!! | GATGAGCTTGCTGAATTTTG+CGG | - | chr3.4:2780103-2780122 | MS.gene51505:intron | 40.0% |
| ATTATGGCTGCTGCTACTGT+TGG | - | chr3.4:2777787-2777806 | MS.gene51505:CDS | 45.0% | |
| CAAACCACCTCTCCAAATTG+GGG | + | chr3.4:2778133-2778152 | None:intergenic | 45.0% | |
| CAAAGATAACCTAGCAGCCA+AGG | + | chr3.4:2779086-2779105 | None:intergenic | 45.0% | |
| CCAAACCACCTCTCCAAATT+GGG | + | chr3.4:2778134-2778153 | None:intergenic | 45.0% | |
| CCAATTTGGAGAGGTGGTTT+GGG | - | chr3.4:2778132-2778151 | MS.gene51505:intron | 45.0% | |
| CGAGGTCTGAATTCAAACCA+GGG | + | chr3.4:2778065-2778084 | None:intergenic | 45.0% | |
| CTGGAAAAGCTGTTGCAGAA+TGG | - | chr3.4:2778934-2778953 | MS.gene51505:CDS | 45.0% | |
| GTAGCAGCAGCCATAATCAA+AGG | + | chr3.4:2777784-2777803 | None:intergenic | 45.0% | |
| GTCCGTAAGACACAACTCAA+CGG | - | chr3.4:2778006-2778025 | MS.gene51505:CDS | 45.0% | |
| GTTTGAACCCCAATTTGGAG+AGG | - | chr3.4:2778123-2778142 | MS.gene51505:intron | 45.0% | |
| TAATGTGGCAAGCCATCTTC+AGG | - | chr3.4:2781083-2781102 | MS.gene51505:CDS | 45.0% | |
| TACTTTGGTCTCAGGTAGAC+TGG | - | chr3.4:2780950-2780969 | MS.gene51505:intron | 45.0% | |
| TAGGCTAAACATGTTCACCC+TGG | - | chr3.4:2778045-2778064 | MS.gene51505:CDS | 45.0% | |
| TGATGCAGTGTGCTTTGATG+TGG | - | chr3.4:2778857-2778876 | MS.gene51505:intron | 45.0% | |
| TGGTCTCAATCATACCTTGG+CGG | + | chr3.4:2779154-2779173 | None:intergenic | 45.0% | |
| TGTTGAGGTCTAGATGGTCA+TGG | - | chr3.4:2778309-2778328 | MS.gene51505:intron | 45.0% | |
| ! | AGCACTGTGTGCATTGATGA+AGG | - | chr3.4:2780076-2780095 | MS.gene51505:intron | 45.0% |
| ! | AGCTGGTCTCAATCATACCT+TGG | + | chr3.4:2779157-2779176 | None:intergenic | 45.0% |
| ! | GTCCGTTGAGTTGTGTCTTA+CGG | + | chr3.4:2778011-2778030 | None:intergenic | 45.0% |
| ! | GTCTAAGGCAAGAGAAATGG+GGG | + | chr3.4:2779314-2779333 | None:intergenic | 45.0% |
| ! | TGAATTTTGCGGGACAGGAA+AGG | - | chr3.4:2780114-2780133 | MS.gene51505:intron | 45.0% |
| !! | AGTTTTTGGAAACCGTGGGA+AGG | + | chr3.4:2781119-2781138 | None:intergenic | 45.0% |
| !! | TGTTCCTTTTGAGGAAGCCT+TGG | - | chr3.4:2779066-2779085 | MS.gene51505:intron | 45.0% |
| !!! | CGAGCTTGCTGAATTTTGTG+GGG | - | chr3.4:2778911-2778930 | MS.gene51505:CDS | 45.0% |
| !!! | GACGAGCTTGCTGAATTTTG+TGG | - | chr3.4:2778909-2778928 | MS.gene51505:CDS | 45.0% |
| !! | TAAAATTAAATATATCAAAA+CGG | + | chr3.4:2778537-2778556 | None:intergenic | 5.0% |
| CCCAAACCACCTCTCCAAAT+TGG | + | chr3.4:2778135-2778154 | None:intergenic | 50.0% | |
| CCCAATTTGGAGAGGTGGTT+TGG | - | chr3.4:2778131-2778150 | MS.gene51505:intron | 50.0% | |
| GCAGCCAATGCTTCCTCAAA+AGG | + | chr3.4:2780287-2780306 | None:intergenic | 50.0% | |
| GCAGTTGTGTGTCGGAGTTT+AGG | - | chr3.4:2778084-2778103 | MS.gene51505:CDS | 50.0% | |
| GCCTCAATTGCGTAGCATTG+CGG | - | chr3.4:2778262-2778281 | MS.gene51505:intron | 50.0% | |
| GCGAGGTCTGAATTCAAACC+AGG | + | chr3.4:2778066-2778085 | None:intergenic | 50.0% | |
| GCTCGTCAATTCCTTCATCC+AGG | + | chr3.4:2778896-2778915 | None:intergenic | 50.0% | |
| GGGCTTGACAAGGCATAATG+TGG | - | chr3.4:2781068-2781087 | MS.gene51505:CDS | 50.0% | |
| GTTGCTACTGCGTGACTAAG+AGG | - | chr3.4:2779484-2779503 | MS.gene51505:intron | 50.0% | |
| GTTGTGTGTCGGAGTTTAGG+TGG | - | chr3.4:2778087-2778106 | MS.gene51505:CDS | 50.0% | |
| TAACGTCTGCTGTCATGTCG+CGG | - | chr3.4:2778196-2778215 | MS.gene51505:intron | 50.0% | |
| TCCGCAATGCTACGCAATTG+AGG | + | chr3.4:2778266-2778285 | None:intergenic | 50.0% | |
| TGAAAGTGGAGGGCTTGACA+AGG | - | chr3.4:2781058-2781077 | MS.gene51505:CDS | 50.0% | |
| TGAACCCCAATTTGGAGAGG+TGG | - | chr3.4:2778126-2778145 | MS.gene51505:intron | 50.0% | |
| TGTAGAGGGGCAACATGACA+TGG | - | chr3.4:2780357-2780376 | MS.gene51505:intron | 50.0% | |
| ! | ATTTGGAGAGGTGGTTTGGG+TGG | - | chr3.4:2778135-2778154 | MS.gene51505:intron | 50.0% |
| ! | CTTGCTGAATTTTGCGGGAC+AGG | - | chr3.4:2780109-2780128 | MS.gene51505:intron | 50.0% |
| ! | CTTGCTGAATTTTGTGGGGC+TGG | - | chr3.4:2778915-2778934 | MS.gene51505:CDS | 50.0% |
| ! | TTTGGAGAGGTGGTTTGGGT+GGG | - | chr3.4:2778136-2778155 | MS.gene51505:intron | 50.0% |
| !! | ATGGGGGTGTTTGGAGAAGT+GGG | - | chr3.4:2778412-2778431 | MS.gene51505:intron | 50.0% |
| !! | GGGTGGTTCTGTTCCTTTTG+AGG | - | chr3.4:2779057-2779076 | MS.gene51505:intron | 50.0% |
| !! | TGTCTCGTCAGAGTTTTGGC+TGG | + | chr3.4:2779656-2779675 | None:intergenic | 50.0% |
| AACTCCGACACACAACTGCG+AGG | + | chr3.4:2778083-2778102 | None:intergenic | 55.0% | |
| AGCACTGTGTGCCTGGATGA+AGG | - | chr3.4:2778882-2778901 | MS.gene51505:CDS | 55.0% | |
| CAGACCTCGCAGTTGTGTGT+CGG | - | chr3.4:2778076-2778095 | MS.gene51505:CDS | 55.0% | |
| GCAGCCAAGGCTTCCTCAAA+AGG | + | chr3.4:2779073-2779092 | None:intergenic | 55.0% | |
| GCGTGACTAAGAGGTCGCAT+AGG | - | chr3.4:2779493-2779512 | MS.gene51505:intron | 55.0% | |
| GGCAAGAGAAATGGGGGAGT+AGG | + | chr3.4:2779308-2779327 | None:intergenic | 55.0% | |
| GTGAAGGCAGTGGAGCAACT+AGG | - | chr3.4:2780997-2781016 | MS.gene51505:intron | 55.0% | |
| TGTGGATAGCACTGTGTGCC+TGG | - | chr3.4:2778875-2778894 | MS.gene51505:CDS | 55.0% | |
| TTCTTCAGCAAAGGCCGCCA+AGG | - | chr3.4:2779137-2779156 | MS.gene51505:intron | 55.0% | |
| TTGAGGAAGCCTTGGCTGCT+AGG | - | chr3.4:2779074-2779093 | MS.gene51505:intron | 55.0% | |
| ! | TGGTTTGGGTGGGGGAGTTA+AGG | - | chr3.4:2778146-2778165 | MS.gene51505:intron | 55.0% |
| ! | TTGGAGAGGTGGTTTGGGTG+GGG | - | chr3.4:2778137-2778156 | MS.gene51505:intron | 55.0% |
| !! | CATGGGGGTGTTTGGAGAAG+TGG | - | chr3.4:2778411-2778430 | MS.gene51505:intron | 55.0% |
| CAGGAAAGGCTGCTGCAGAC+TGG | - | chr3.4:2780128-2780147 | MS.gene51505:intron | 60.0% | |
| CTGCTGCAGACTGGACTGCT+AGG | - | chr3.4:2780137-2780156 | MS.gene51505:intron | 60.0% | |
| TGGGTGGGGGAGTTAAGGAG+TGG | - | chr3.4:2778151-2778170 | MS.gene51505:intron | 60.0% | |
| ! | TGGAGAGGTGGTTTGGGTGG+GGG | - | chr3.4:2778138-2778157 | MS.gene51505:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 2777577 | 2781203 | 2777577 | ID=MS.gene51505 |
| chr3.4 | mRNA | 2777577 | 2781203 | 2777577 | ID=MS.gene51505.t1;Parent=MS.gene51505 |
| chr3.4 | exon | 2781050 | 2781203 | 2781050 | ID=MS.gene51505.t1.exon1;Parent=MS.gene51505.t1 |
| chr3.4 | CDS | 2781050 | 2781203 | 2781050 | ID=cds.MS.gene51505.t1;Parent=MS.gene51505.t1 |
| chr3.4 | exon | 2779816 | 2779948 | 2779816 | ID=MS.gene51505.t1.exon2;Parent=MS.gene51505.t1 |
| chr3.4 | CDS | 2779816 | 2779948 | 2779816 | ID=cds.MS.gene51505.t1;Parent=MS.gene51505.t1 |
| chr3.4 | exon | 2779622 | 2779729 | 2779622 | ID=MS.gene51505.t1.exon3;Parent=MS.gene51505.t1 |
| chr3.4 | CDS | 2779622 | 2779729 | 2779622 | ID=cds.MS.gene51505.t1;Parent=MS.gene51505.t1 |
| chr3.4 | exon | 2778870 | 2778963 | 2778870 | ID=MS.gene51505.t1.exon4;Parent=MS.gene51505.t1 |
| chr3.4 | CDS | 2778870 | 2778963 | 2778870 | ID=cds.MS.gene51505.t1;Parent=MS.gene51505.t1 |
| chr3.4 | exon | 2778622 | 2778734 | 2778622 | ID=MS.gene51505.t1.exon5;Parent=MS.gene51505.t1 |
| chr3.4 | CDS | 2778622 | 2778734 | 2778622 | ID=cds.MS.gene51505.t1;Parent=MS.gene51505.t1 |
| chr3.4 | exon | 2778268 | 2778314 | 2778268 | ID=MS.gene51505.t1.exon6;Parent=MS.gene51505.t1 |
| chr3.4 | CDS | 2778268 | 2778314 | 2778268 | ID=cds.MS.gene51505.t1;Parent=MS.gene51505.t1 |
| chr3.4 | exon | 2777981 | 2778132 | 2777981 | ID=MS.gene51505.t1.exon7;Parent=MS.gene51505.t1 |
| chr3.4 | CDS | 2777981 | 2778132 | 2777981 | ID=cds.MS.gene51505.t1;Parent=MS.gene51505.t1 |
| chr3.4 | exon | 2777577 | 2777816 | 2777577 | ID=MS.gene51505.t1.exon8;Parent=MS.gene51505.t1 |
| chr3.4 | CDS | 2777577 | 2777816 | 2777577 | ID=cds.MS.gene51505.t1;Parent=MS.gene51505.t1 |
| Gene Sequence |
| Protein sequence |
