AlfalfaGEDB | MS.gene51681

M. sativa cultivar XinJiangDaYe / MS.gene51681

KEGG: -
GO: GO:0000160 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0007165 GO:0008150 GO:0009987 GO:0035556 GO:0050789 GO:0050794 GO:0065007 GO:0097159 GO:1901363
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51681.t1	KEH31558.1	61.6	279	11	1	1	183	142	420	3.60E-77	297.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51681.t1	Q6LA43	41.5	258	75	5	2	183	111	368	1.8e-40	167.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51681.t1	A0A072UQC7	61.6	279	11	1	1	183	103	381	2.6e-77	297.7

TFs/TRs:

Gene ID	Type	Classification
MS.gene51681.t1	TF	GARP-G2-like

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51681.t1	MTR_4g098870	82.394	142	24	1	42	183	241	381	4.34e-76	238
MS.gene51681.t1	MTR_4g098870	98.361	61	1	0	1	61	103	163	7.09e-33	123
MS.gene51681.t1	MTR_4g098870	82.394	142	24	1	42	183	241	381	4.50e-76	238
MS.gene51681.t1	MTR_4g098870	98.361	61	1	0	1	61	103	163	5.92e-33	123
MS.gene51681.t1	MTR_4g098870	82.394	142	24	1	42	183	261	401	6.27e-76	238
MS.gene51681.t1	MTR_4g098870	98.361	61	1	0	1	61	123	183	7.70e-33	123
MS.gene51681.t1	MTR_4g098870	82.394	142	24	1	42	183	261	401	7.03e-76	238
MS.gene51681.t1	MTR_4g098870	98.361	61	1	0	1	61	123	183	6.65e-33	123
MS.gene51681.t1	MTR_4g098870	82.394	142	24	1	42	183	280	420	1.48e-75	237
MS.gene51681.t1	MTR_4g098870	98.361	61	1	0	1	61	142	202	8.33e-33	123
MS.gene51681.t1	MTR_5g014040	62.698	126	46	1	58	183	258	382	3.43e-42	148
MS.gene51681.t1	MTR_5g014040	62.105	95	31	1	1	95	103	192	2.30e-28	110
MS.gene51681.t1	MTR_5g014040	60.305	131	46	2	58	183	218	347	4.63e-40	142
MS.gene51681.t1	MTR_5g014040	62.105	95	31	1	1	95	63	152	1.83e-28	110
MS.gene51681.t1	MTR_5g014040	60.305	131	46	2	58	183	258	387	7.31e-40	142
MS.gene51681.t1	MTR_5g014040	62.105	95	31	1	1	95	103	192	2.37e-28	110
MS.gene51681.t1	MTR_4g078810	57.333	75	32	0	109	183	155	229	7.39e-27	105
MS.gene51681.t1	MTR_2g090675	62.121	66	25	0	109	174	158	223	6.59e-26	102
MS.gene51681.t1	MTR_3g106220	36.471	170	96	3	1	170	99	256	5.40e-24	98.6
MS.gene51681.t1	MTR_2g450070	36.782	174	99	3	1	172	109	273	3.01e-23	96.3
MS.gene51681.t1	MTR_2g450070	36.782	174	99	3	1	172	109	273	3.25e-23	96.3
MS.gene51681.t1	MTR_1g032570	34.759	187	100	4	1	182	33	202	6.08e-23	95.1
MS.gene51681.t1	MTR_1g032570	34.759	187	100	4	1	182	102	271	9.39e-23	94.7
MS.gene51681.t1	MTR_4g131570	35.882	170	83	5	1	165	108	256	4.52e-22	92.8
MS.gene51681.t1	MTR_4g121020	35.294	170	92	2	1	170	122	273	4.81e-22	92.8
MS.gene51681.t1	MTR_4g121020	35.294	170	92	2	1	170	122	273	5.09e-22	92.8
MS.gene51681.t1	MTR_4g121020	35.294	170	92	2	1	170	18	169	5.61e-22	92.4
MS.gene51681.t1	MTR_2g034960	33.889	180	79	4	1	170	120	269	2.53e-21	90.9
MS.gene51681.t1	MTR_4g021790	33.133	166	68	2	1	166	100	222	5.50e-21	87.4
MS.gene51681.t1	MTR_4g131580	37.952	166	82	4	1	165	108	253	6.46e-21	89.7
MS.gene51681.t1	MTR_8g079940	33.889	180	95	3	1	177	116	274	7.11e-21	89.4
MS.gene51681.t1	MTR_4g131600	32.418	182	88	4	1	180	111	259	5.86e-20	86.7
MS.gene51681.t1	MTR_3g086100	35.714	168	88	5	1	166	104	253	1.25e-19	85.9
MS.gene51681.t1	MTR_3g086100	35.714	168	88	5	1	166	33	182	1.27e-19	85.9
MS.gene51681.t1	MTR_4g021760	29.878	164	72	2	1	164	101	221	5.42e-19	82.8
MS.gene51681.t1	MTR_7g117705	30.811	185	81	2	1	170	97	249	7.69e-19	83.2
MS.gene51681.t1	MTR_1g013170	32.571	175	102	3	1	175	96	254	2.17e-18	82.0
MS.gene51681.t1	MTR_1g013180	34.337	166	93	3	1	166	247	396	2.32e-18	82.0
MS.gene51681.t1	MTR_7g089010	60.714	56	22	0	111	166	90	145	1.39e-17	78.6
MS.gene51681.t1	MTR_4g064730	60.714	56	22	0	111	166	130	185	2.11e-17	78.2
MS.gene51681.t1	MTR_4g086835	43.056	72	41	0	99	170	261	332	9.31e-16	74.3
MS.gene51681.t1	MTR_7g026400	53.968	63	29	0	111	173	156	218	1.34e-15	74.3
MS.gene51681.t1	MTR_3g102590	55.738	61	26	1	105	165	137	196	1.42e-15	72.4
MS.gene51681.t1	MTR_1g080330	42.342	111	45	3	57	164	134	228	3.17e-15	72.0
MS.gene51681.t1	MTR_3g102600	52.727	55	26	0	111	165	82	136	4.07e-15	70.1
MS.gene51681.t1	MTR_3g102600	52.727	55	26	0	111	165	131	185	5.82e-15	70.5
MS.gene51681.t1	MTR_1g080330	42.342	111	45	3	57	164	134	228	6.83e-15	72.0
MS.gene51681.t1	MTR_1g093080	38.835	103	59	2	67	168	169	268	2.41e-14	70.1
MS.gene51681.t1	MTR_1g053830	40.909	88	45	3	90	176	2	83	3.45e-14	65.5
MS.gene51681.t1	MTR_4g086835	42.466	73	41	1	99	170	261	333	3.86e-14	69.7
MS.gene51681.t1	MTR_6g045327	29.609	179	77	5	2	179	106	236	4.52e-14	69.7
MS.gene51681.t1	MTR_5g054300	43.158	95	42	3	75	168	172	255	5.41e-14	69.3
MS.gene51681.t1	MTR_5g017980	50.000	60	30	0	111	170	192	251	6.79e-14	68.6
MS.gene51681.t1	MTR_5g017980	50.000	60	30	0	111	170	191	250	6.95e-14	68.6
MS.gene51681.t1	MTR_7g098250	52.113	71	32	2	95	164	246	315	1.02e-13	68.6
MS.gene51681.t1	MTR_4g021855	55.357	56	25	0	111	166	167	222	1.67e-13	67.4
MS.gene51681.t1	MTR_4g113140	49.206	63	31	1	111	172	234	296	1.74e-13	67.8
MS.gene51681.t1	MTR_3g102600	53.191	47	22	0	117	163	88	134	2.99e-13	64.3
MS.gene51681.t1	MTR_3g102600	53.191	47	22	0	117	163	137	183	4.85e-13	64.7
MS.gene51681.t1	MTR_0450s0040	46.032	63	34	0	111	173	168	230	5.18e-13	66.2
MS.gene51681.t1	MTR_3g102590	54.386	57	25	1	105	161	137	192	8.57e-13	63.9
MS.gene51681.t1	MTR_7g115530	55.357	56	24	1	110	164	216	271	1.05e-12	65.1
MS.gene51681.t1	MTR_7g115530	55.357	56	24	1	110	164	216	271	1.57e-12	64.7
MS.gene51681.t1	MTR_7g115530	55.357	56	24	1	110	164	216	271	1.63e-12	65.1
MS.gene51681.t1	MTR_8g105600	30.952	168	88	4	1	166	100	241	1.63e-12	65.1
MS.gene51681.t1	MTR_7g115530	55.357	56	24	1	110	164	216	271	1.70e-12	65.1
MS.gene51681.t1	MTR_5g041350	44.118	68	37	1	112	178	15	82	2.54e-12	64.3
MS.gene51681.t1	MTR_5g017980	49.180	61	30	1	111	170	192	252	2.91e-12	63.9
MS.gene51681.t1	MTR_6g032990	47.368	57	29	1	112	167	42	98	2.53e-11	61.6
MS.gene51681.t1	MTR_2g086450	47.368	57	29	1	112	167	45	101	3.28e-11	61.2
MS.gene51681.t1	MTR_2g027860	52.632	57	26	1	112	167	49	105	3.94e-11	60.8
MS.gene51681.t1	MTR_7g088070	47.059	68	33	2	112	178	50	115	4.39e-11	60.5
MS.gene51681.t1	MTR_4g021845	49.020	51	26	0	111	161	167	217	5.87e-11	59.7
MS.gene51681.t1	MTR_7g115530	53.704	54	24	1	110	162	216	269	9.29e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51681.t1	AT4G18020	69.231	78	21	2	107	183	293	368	1.11e-29	114
MS.gene51681.t1	AT4G18020	63.636	77	26	1	2	78	111	185	1.70e-24	99.4
MS.gene51681.t1	AT4G18020	69.231	78	21	2	107	183	293	368	1.11e-29	114
MS.gene51681.t1	AT4G18020	63.636	77	26	1	2	78	111	185	1.70e-24	99.4
MS.gene51681.t1	AT4G18020	69.231	78	21	2	107	183	293	368	1.11e-29	114
MS.gene51681.t1	AT4G18020	63.636	77	26	1	2	78	111	185	1.70e-24	99.4
MS.gene51681.t1	AT4G18020	69.231	78	21	2	107	183	293	368	1.11e-29	114
MS.gene51681.t1	AT4G18020	63.636	77	26	1	2	78	111	185	1.70e-24	99.4
MS.gene51681.t1	AT4G18020	69.231	78	21	2	107	183	293	368	1.11e-29	114
MS.gene51681.t1	AT4G18020	63.636	77	26	1	2	78	111	185	1.70e-24	99.4
MS.gene51681.t1	AT4G18020	69.231	78	21	2	107	183	293	368	1.11e-29	114
MS.gene51681.t1	AT4G18020	63.636	77	26	1	2	78	111	185	1.70e-24	99.4
MS.gene51681.t1	AT4G18020	69.231	78	21	2	107	183	293	368	1.12e-29	114
MS.gene51681.t1	AT4G18020	63.636	77	26	1	2	78	111	185	2.14e-24	99.4
MS.gene51681.t1	AT4G18020	69.231	78	21	2	107	183	293	368	1.12e-29	114
MS.gene51681.t1	AT4G18020	63.636	77	26	1	2	78	111	185	2.14e-24	99.4
MS.gene51681.t1	AT4G18020	69.231	78	21	2	107	183	293	368	1.12e-29	114
MS.gene51681.t1	AT4G18020	63.636	77	26	1	2	78	111	185	2.14e-24	99.4
MS.gene51681.t1	AT4G18020	69.231	78	21	2	107	183	293	368	1.12e-29	114
MS.gene51681.t1	AT4G18020	63.636	77	26	1	2	78	111	185	2.14e-24	99.4
MS.gene51681.t1	AT4G18020	69.231	78	21	2	107	183	293	368	1.12e-29	114
MS.gene51681.t1	AT4G18020	63.636	77	26	1	2	78	111	185	2.14e-24	99.4
MS.gene51681.t1	AT5G44190	63.514	74	27	0	110	183	145	218	6.77e-27	104
MS.gene51681.t1	AT5G44190	63.514	74	27	0	110	183	145	218	7.51e-27	105
MS.gene51681.t1	AT2G20570	66.667	66	22	0	109	174	150	215	2.57e-26	103
MS.gene51681.t1	AT2G20570	55.556	90	40	0	85	174	142	231	7.17e-26	102
MS.gene51681.t1	AT5G58080	37.427	171	84	4	1	170	104	252	4.74e-25	101
MS.gene51681.t1	AT3G16857	39.205	176	97	4	1	170	54	225	4.68e-24	98.6
MS.gene51681.t1	AT3G16857	39.205	176	97	4	1	170	124	295	5.79e-24	98.6
MS.gene51681.t1	AT3G16857	39.205	176	97	4	1	170	124	295	6.49e-24	98.2
MS.gene51681.t1	AT2G01760	36.416	173	94	4	1	170	34	193	3.40e-23	94.4
MS.gene51681.t1	AT2G25180	35.754	179	77	3	1	170	104	253	4.31e-23	95.9
MS.gene51681.t1	AT2G01760	36.416	173	94	4	1	170	99	258	6.32e-23	94.4
MS.gene51681.t1	AT2G01760	36.416	173	94	4	1	170	127	286	9.06e-23	94.4
MS.gene51681.t1	AT2G40970	46.591	88	47	0	83	170	76	163	3.03e-20	85.1
MS.gene51681.t1	AT3G10760	45.556	90	49	0	77	166	70	159	2.55e-19	84.0
MS.gene51681.t1	AT4G31920	34.545	165	76	1	1	165	104	236	5.28e-19	84.0
MS.gene51681.t1	AT5G59570	58.333	60	25	0	111	170	140	199	1.53e-18	81.3
MS.gene51681.t1	AT5G59570	58.333	60	25	0	111	170	140	199	1.53e-18	81.3
MS.gene51681.t1	AT5G05090	60.714	56	22	0	111	166	80	135	3.38e-18	80.1
MS.gene51681.t1	AT3G62670	34.715	193	84	9	1	181	126	288	3.60e-18	81.3
MS.gene51681.t1	AT3G46640	60.714	56	22	0	111	166	143	198	1.33e-17	79.0
MS.gene51681.t1	AT3G46640	60.714	56	22	0	111	166	143	198	1.33e-17	79.0
MS.gene51681.t1	AT3G46640	60.714	56	22	0	111	166	143	198	1.43e-17	79.0
MS.gene51681.t1	AT1G67710	35.057	174	82	5	1	166	24	174	4.57e-17	78.2
MS.gene51681.t1	AT1G67710	35.057	174	82	5	1	166	98	248	5.38e-17	78.2
MS.gene51681.t1	AT1G67710	35.057	174	82	5	1	166	33	183	6.21e-17	77.8
MS.gene51681.t1	AT1G25550	56.452	62	25	2	108	168	206	266	4.14e-16	75.1
MS.gene51681.t1	AT5G07210	29.775	178	110	3	5	170	106	280	7.58e-15	72.0
MS.gene51681.t1	AT5G07210	29.775	178	110	3	5	170	114	288	7.61e-15	72.0
MS.gene51681.t1	AT1G68670	54.237	59	26	1	111	168	214	272	1.46e-14	70.9
MS.gene51681.t1	AT5G49240	31.818	154	88	4	8	161	136	272	2.09e-14	70.1
MS.gene51681.t1	AT2G03500	49.254	67	32	2	107	172	229	294	2.51e-14	70.5
MS.gene51681.t1	AT4G37180	50.667	75	32	2	95	168	197	267	5.51e-14	69.3
MS.gene51681.t1	AT4G37180	50.667	75	32	2	95	168	204	274	6.67e-14	68.9
MS.gene51681.t1	AT3G25790	56.604	53	22	1	117	168	201	253	3.22e-13	67.0
MS.gene51681.t1	AT3G13040	43.000	100	53	3	81	178	209	306	3.62e-13	67.0
MS.gene51681.t1	AT3G13040	43.000	100	53	3	81	178	209	306	3.62e-13	67.0
MS.gene51681.t1	AT3G13040	43.000	100	53	3	81	178	209	306	3.62e-13	67.0
MS.gene51681.t1	AT2G27070	31.667	180	110	6	3	171	107	284	3.77e-13	67.0
MS.gene51681.t1	AT2G20400	54.688	64	28	1	112	174	231	294	1.54e-12	65.1
MS.gene51681.t1	AT4G28610	50.000	64	31	1	112	174	225	288	1.62e-12	65.1
MS.gene51681.t1	AT2G20400	54.688	64	28	1	112	174	231	294	1.68e-12	65.1
MS.gene51681.t1	AT1G13300	37.634	93	46	3	83	174	161	242	8.10e-12	63.2
MS.gene51681.t1	AT3G04030	46.429	56	30	0	112	167	45	100	8.78e-12	63.2
MS.gene51681.t1	AT1G25550	54.545	55	23	2	108	161	206	259	8.88e-12	62.4
MS.gene51681.t1	AT5G29000	39.506	81	46	2	85	164	163	241	1.36e-11	62.4
MS.gene51681.t1	AT5G29000	39.506	81	46	2	85	164	163	241	1.36e-11	62.4
MS.gene51681.t1	AT5G29000	39.506	81	46	2	85	164	206	284	1.43e-11	62.4
MS.gene51681.t1	AT5G29000	39.506	81	46	2	85	164	206	284	1.44e-11	62.0
MS.gene51681.t1	AT3G04030	47.368	57	29	1	112	167	45	101	2.02e-11	62.0
MS.gene51681.t1	AT1G68210	28.342	187	105	3	13	177	111	290	2.04e-11	62.4
MS.gene51681.t1	AT1G49560	50.847	59	28	1	111	168	191	249	2.20e-11	61.6
MS.gene51681.t1	AT3G04030	47.368	57	29	1	112	167	45	101	2.20e-11	62.0
MS.gene51681.t1	AT2G01060	52.632	57	26	1	112	167	15	71	2.27e-11	61.2
MS.gene51681.t1	AT5G18240	49.123	57	28	1	112	167	45	101	2.58e-11	61.6
MS.gene51681.t1	AT5G18240	49.123	57	28	1	112	167	45	101	2.58e-11	61.6
MS.gene51681.t1	AT5G18240	49.123	57	28	1	112	167	45	101	2.91e-11	61.6
MS.gene51681.t1	AT5G18240	49.123	57	28	1	112	167	45	101	2.91e-11	61.6
MS.gene51681.t1	AT5G18240	49.123	57	28	1	112	167	45	101	2.93e-11	61.6
MS.gene51681.t1	AT2G06020	38.000	100	50	3	80	170	49	145	5.42e-11	60.5
MS.gene51681.t1	AT3G04450	49.123	57	28	1	112	167	238	294	9.25e-11	59.7

Find 33 sgRNAs with CRISPR-Local

Find 69 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGCTATTCCTTCTCGAATAT+TGG	0.160903	3.4:+5589683	MS.gene51681:CDS
AGGACAAGCTCAGAAATATT+TGG	0.362029	3.4:+5589085	MS.gene51681:CDS
TAATGTGGCAAGCCATCTTC+AGG	0.386166	3.4:+5589737	MS.gene51681:CDS
TTGTTTAGAACCTTCACATT+TGG	0.411730	3.4:-5589352	None:intergenic
CGAAGCAGGATGATCGGAAA+TGG	0.452472	3.4:+5589936	MS.gene51681:CDS
ACCTTCACATTTGGTAATTG+TGG	0.453921	3.4:-5589343	None:intergenic
AATGTGAGATAAAAGCTAAT+CGG	0.462021	3.4:+5589425	MS.gene51681:CDS
GAGACATATCTTACCGAAGC+AGG	0.475105	3.4:+5589922	MS.gene51681:CDS
GAGGCTACAGATTCCTTGAC+AGG	0.481302	3.4:-5589256	None:intergenic
CATTTCCGATCATCCTGCTT+CGG	0.484186	3.4:-5589935	None:intergenic
CTCAAACAGGCATTCAATGC+TGG	0.493866	3.4:+5589205	MS.gene51681:intron
CTGAGCTTGTCCTCGGAGAG+TGG	0.496448	3.4:-5589075	None:intergenic
TACTTTGGTCTCAGGTAGAC+TGG	0.503714	3.4:+5589604	MS.gene51681:intron
TACTTCTATGCACTTCATCA+TGG	0.504891	3.4:-5588780	None:intergenic
ATCTGTTTGAATCTGCAAGA+TGG	0.516940	3.4:-5589278	None:intergenic
AATATTGGATCTAATGAAAG+TGG	0.519493	3.4:+5589698	MS.gene51681:CDS
ACAACATCTGCAAATAAAGT+AGG	0.528162	3.4:+5589388	MS.gene51681:CDS
ATTAGATCCAATATTCGAGA+AGG	0.541398	3.4:-5589690	None:intergenic
CAGAAATATTTGGCAGCATG+TGG	0.544781	3.4:+5589095	MS.gene51681:CDS
AATATTTCTGAGCTTGTCCT+CGG	0.546887	3.4:-5589082	None:intergenic
ACCACAATTACCAAATGTGA+AGG	0.551748	3.4:+5589342	MS.gene51681:CDS
GGTAGATTATAACCTGAAGA+TGG	0.564115	3.4:-5589749	None:intergenic
TCTTACCGAAGCAGGATGAT+CGG	0.574745	3.4:+5589930	MS.gene51681:CDS
GTGAAGGCAGTGGAGCAACT+AGG	0.575398	3.4:+5589651	MS.gene51681:CDS
ATCGGAAATGGCTAAATACA+AGG	0.595293	3.4:+5589948	MS.gene51681:CDS
TTGGCAGCATGTGGTTCACA+AGG	0.605863	3.4:+5589104	MS.gene51681:CDS
TGAATCACTGAAACCTGTCA+AGG	0.606622	3.4:+5589243	MS.gene51681:CDS
ATTGGATCTAATGAAAGTGG+AGG	0.613074	3.4:+5589701	MS.gene51681:CDS
GGGCTTGACAAGGCATAATG+TGG	0.631155	3.4:+5589722	MS.gene51681:CDS
TTGGATCTAATGAAAGTGGA+GGG	0.637148	3.4:+5589702	MS.gene51681:CDS
TGAAAGTGGAGGGCTTGACA+AGG	0.644049	3.4:+5589712	MS.gene51681:CDS
TGTTTGAATCTGCAAGATGG+AGG	0.654248	3.4:-5589275	None:intergenic
TCTCAGCAAACCACTCTCCG+AGG	0.676397	3.4:+5589065	MS.gene51681:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTATATTCATATATCTTCAT+AGG	+	chr3.4:5589837-5589856	MS.gene51681:intron	15.0%
!!	AAAACTGTATTAAGAAAATC+AGG	-	chr3.4:5589582-5589601	None:intergenic	20.0%
!!!	ATTAATTACAGTTTTGAATG+AGG	-	chr3.4:5589805-5589824	None:intergenic	20.0%
!!!	CATATCCTTTTAAAATTAGT+GGG	+	chr3.4:5588881-5588900	MS.gene51681:intron	20.0%
!!!	CTAATCAAACTAGTTTTATT+TGG	+	chr3.4:5588904-5588923	MS.gene51681:intron	20.0%
!!!	TGATTTTCTTAATACAGTTT+TGG	+	chr3.4:5589581-5589600	MS.gene51681:intron	20.0%
!!!	TTTGTTTTCTTTTTTAAGCT+TGG	+	chr3.4:5589030-5589049	MS.gene51681:intron	20.0%
!	AACATTATGAGAAGAATGAA+TGG	-	chr3.4:5589476-5589495	None:intergenic	25.0%
!	AAGCATGAAATAACGATATA+CGG	-	chr3.4:5588842-5588861	None:intergenic	25.0%
!	AATATTGGATCTAATGAAAG+TGG	+	chr3.4:5589698-5589717	MS.gene51681:CDS	25.0%
!	AATGTGAGATAAAAGCTAAT+CGG	+	chr3.4:5589425-5589444	MS.gene51681:CDS	25.0%
!	ATATTAAGAGTAAATGCATG+TGG	-	chr3.4:5589154-5589173	None:intergenic	25.0%
!	CAATGAACATTGTGAAATAA+CGG	-	chr3.4:5589505-5589524	None:intergenic	25.0%
!	CTGAGTAAAATATTCTTATG+TGG	+	chr3.4:5589177-5589196	MS.gene51681:intron	25.0%
!	GAATATAACCTTATACAACA+TGG	-	chr3.4:5589533-5589552	None:intergenic	25.0%
!	TCAGTTCTACTTACTTAAAT+AGG	+	chr3.4:5588931-5588950	MS.gene51681:intron	25.0%
!	TCTTATGCATTCTATATTTC+TGG	-	chr3.4:5589904-5589923	None:intergenic	25.0%
!	TTGTTTATCCATGTTGTATA+AGG	+	chr3.4:5589522-5589541	MS.gene51681:intron	25.0%
!	TTTAAAAGGATATGGTCTAT+AGG	-	chr3.4:5588875-5588894	None:intergenic	25.0%
!!	ATTAGCCCACTAATTTTAAA+AGG	-	chr3.4:5588889-5588908	None:intergenic	25.0%
!!	TATATCGTTATTTCATGCTT+TGG	+	chr3.4:5588842-5588861	MS.gene51681:intron	25.0%
!!!	CCACTAATTTTAAAAGGATA+TGG	-	chr3.4:5588883-5588902	None:intergenic	25.0%
!!!	CCATATCCTTTTAAAATTAG+TGG	+	chr3.4:5588880-5588899	MS.gene51681:intron	25.0%
!!!	TGAGGTATTGAAATAGTTTT+TGG	-	chr3.4:5589787-5589806	None:intergenic	25.0%
!!!	TTAATACAGTTTTGGTACTT+TGG	+	chr3.4:5589589-5589608	MS.gene51681:intron	25.0%
	ACAACATCTGCAAATAAAGT+AGG	+	chr3.4:5589388-5589407	MS.gene51681:CDS	30.0%
	AGGTAATGCATACTAACATA+AGG	+	chr3.4:5589857-5589876	MS.gene51681:intron	30.0%
	ATTAGATCCAATATTCGAGA+AGG	-	chr3.4:5589693-5589712	None:intergenic	30.0%
	TTATGTGGTTTAACTCAAAC+AGG	+	chr3.4:5589192-5589211	MS.gene51681:intron	30.0%
!	AGTGCATAGAAGTAAGATTT+TGG	+	chr3.4:5588789-5588808	MS.gene51681:intron	30.0%
!	TTGTTTAGAACCTTCACATT+TGG	-	chr3.4:5589355-5589374	None:intergenic	30.0%
!!	AAATAGTTTTTGGAAACCGT+GGG	-	chr3.4:5589777-5589796	None:intergenic	30.0%
	AAACAAAGCAGAGAGTAAAG+AGG	-	chr3.4:5589017-5589036	None:intergenic	35.0%
	ACCACAATTACCAAATGTGA+AGG	+	chr3.4:5589342-5589361	MS.gene51681:CDS	35.0%
	AGGACAAGCTCAGAAATATT+TGG	+	chr3.4:5589085-5589104	MS.gene51681:CDS	35.0%
	ATCGGAAATGGCTAAATACA+AGG	+	chr3.4:5589948-5589967	MS.gene51681:CDS	35.0%
	ATCTGTTTGAATCTGCAAGA+TGG	-	chr3.4:5589281-5589300	None:intergenic	35.0%
	ATTGGATCTAATGAAAGTGG+AGG	+	chr3.4:5589701-5589720	MS.gene51681:CDS	35.0%
	CAAAAAATTTGTGAAGGCAG+TGG	+	chr3.4:5589641-5589660	MS.gene51681:CDS	35.0%
	GCTGCACAAAAAATTTGTGA+AGG	+	chr3.4:5589635-5589654	MS.gene51681:CDS	35.0%
	GGTAGATTATAACCTGAAGA+TGG	-	chr3.4:5589752-5589771	None:intergenic	35.0%
	TTGGATCTAATGAAAGTGGA+GGG	+	chr3.4:5589702-5589721	MS.gene51681:CDS	35.0%
!	AATATTTCTGAGCTTGTCCT+CGG	-	chr3.4:5589085-5589104	None:intergenic	35.0%
!	ACCTTCACATTTGGTAATTG+TGG	-	chr3.4:5589346-5589365	None:intergenic	35.0%
!!	GAAATAGTTTTTGGAAACCG+TGG	-	chr3.4:5589778-5589797	None:intergenic	35.0%
!!!	ACAAATTTTTTGTGCAGCTC+TGG	-	chr3.4:5589633-5589652	None:intergenic	35.0%
	CAGAAATATTTGGCAGCATG+TGG	+	chr3.4:5589095-5589114	MS.gene51681:CDS	40.0%
	CGCTATTCCTTCTCGAATAT+TGG	+	chr3.4:5589683-5589702	MS.gene51681:CDS	40.0%
	GCGCGCATCAACAATTAAAA+TGG	-	chr3.4:5588991-5589010	None:intergenic	40.0%
	GGTTATAATCTACCTTCCCA+CGG	+	chr3.4:5589758-5589777	MS.gene51681:intron	40.0%
	TGAATCACTGAAACCTGTCA+AGG	+	chr3.4:5589243-5589262	MS.gene51681:CDS	40.0%
	TGTTTGAATCTGCAAGATGG+AGG	-	chr3.4:5589278-5589297	None:intergenic	40.0%
!!	AGTTTTGGTACTTTGGTCTC+AGG	+	chr3.4:5589596-5589615	MS.gene51681:intron	40.0%
!!!	CTTTTTTAAGCTTGGAGCAG+TGG	+	chr3.4:5589038-5589057	MS.gene51681:intron	40.0%
	CATTTCCGATCATCCTGCTT+CGG	-	chr3.4:5589938-5589957	None:intergenic	45.0%
	CTCAAACAGGCATTCAATGC+TGG	+	chr3.4:5589205-5589224	MS.gene51681:intron	45.0%
	GAGACATATCTTACCGAAGC+AGG	+	chr3.4:5589922-5589941	MS.gene51681:CDS	45.0%
	TAATGTGGCAAGCCATCTTC+AGG	+	chr3.4:5589737-5589756	MS.gene51681:CDS	45.0%
	TACTTTGGTCTCAGGTAGAC+TGG	+	chr3.4:5589604-5589623	MS.gene51681:intron	45.0%
	TCTTACCGAAGCAGGATGAT+CGG	+	chr3.4:5589930-5589949	MS.gene51681:CDS	45.0%
!!	AGTTTTTGGAAACCGTGGGA+AGG	-	chr3.4:5589773-5589792	None:intergenic	45.0%
	CGAAGCAGGATGATCGGAAA+TGG	+	chr3.4:5589936-5589955	MS.gene51681:CDS	50.0%
	GAGGCTACAGATTCCTTGAC+AGG	-	chr3.4:5589259-5589278	None:intergenic	50.0%
	GGGCTTGACAAGGCATAATG+TGG	+	chr3.4:5589722-5589741	MS.gene51681:CDS	50.0%
	TGAAAGTGGAGGGCTTGACA+AGG	+	chr3.4:5589712-5589731	MS.gene51681:CDS	50.0%
	TTGGCAGCATGTGGTTCACA+AGG	+	chr3.4:5589104-5589123	MS.gene51681:CDS	50.0%
	GTGAAGGCAGTGGAGCAACT+AGG	+	chr3.4:5589651-5589670	MS.gene51681:CDS	55.0%
	TCTCAGCAAACCACTCTCCG+AGG	+	chr3.4:5589065-5589084	MS.gene51681:CDS	55.0%
	CTGAGCTTGTCCTCGGAGAG+TGG	-	chr3.4:5589078-5589097	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.4	gene	5588782	5589973	5588782	ID=MS.gene51681
chr3.4	mRNA	5588782	5589973	5588782	ID=MS.gene51681.t1;Parent=MS.gene51681
chr3.4	exon	5588782	5588799	5588782	ID=MS.gene51681.t1.exon1;Parent=MS.gene51681.t1
chr3.4	CDS	5588782	5588799	5588782	ID=cds.MS.gene51681.t1;Parent=MS.gene51681.t1
chr3.4	exon	5589048	5589125	5589048	ID=MS.gene51681.t1.exon2;Parent=MS.gene51681.t1
chr3.4	CDS	5589048	5589125	5589048	ID=cds.MS.gene51681.t1;Parent=MS.gene51681.t1
chr3.4	exon	5589214	5589459	5589214	ID=MS.gene51681.t1.exon3;Parent=MS.gene51681.t1
chr3.4	CDS	5589214	5589459	5589214	ID=cds.MS.gene51681.t1;Parent=MS.gene51681.t1
chr3.4	exon	5589618	5589758	5589618	ID=MS.gene51681.t1.exon4;Parent=MS.gene51681.t1
chr3.4	CDS	5589618	5589758	5589618	ID=cds.MS.gene51681.t1;Parent=MS.gene51681.t1
chr3.4	exon	5589905	5589973	5589905	ID=MS.gene51681.t1.exon5;Parent=MS.gene51681.t1
chr3.4	CDS	5589905	5589973	5589905	ID=cds.MS.gene51681.t1;Parent=MS.gene51681.t1

Gene Sequence

>MS.gene51681

ATGATGAAGTGCATAGAAGTAAGATTTTGGTTAAATTCTTTGAGCTAAATGCAATTTCCGTATATCGTTATTTCATGCTTTGGATTCTTTCCTATAGACCATATCCTTTTAAAATTAGTGGGCTAATCAAACTAGTTTTATTTGGTTTTTCAGTTCTACTTACTTAAATAGGATCTTTAACTTAATAGACAATGTGTATTTTCAATCCATTTTAATTGTTGATGCGCGCACACCTCTTTACTCTCTGCTTTGTTTTCTTTTTTAAGCTTGGAGCAGTGGAGTTTCTCAGCAAACCACTCTCCGAGGACAAGCTCAGAAATATTTGGCAGCATGTGGTTCACAAGGTGTGTAAATAATATTCGTGATATTCCACATGCATTTACTCTTAATATATGCTGAGTAAAATATTCTTATGTGGTTTAACTCAAACAGGCATTCAATGCTGGTGTAAGTGCGCTGTCTGAATCACTGAAACCTGTCAAGGAATCTGTAGCCTCCATCTTGCAGATTCAAACAGATCTAAGTGTTGCTGACACTTCTAAGTGTGAGAGTGTTGTTTCACCACAATTACCAAATGTGAAGGTTCTAAACAATAGTGAAAGTAATACAACATCTGCAAATAAAGTAGGTATTCGCAGTCATAAATGTGAGATAAAAGCTAATCGGAAGAAGATGAAAGTAAGTTGTTTTTCCATTCATTCTTCTCATAATGTTCTTGTTCCGTTATTTCACAATGTTCATTGTTTATCCATGTTGTATAAGGTTATATTCATTTTATGTATGAATGATCTACTGAACCTGATTTTCTTAATACAGTTTTGGTACTTTGGTCTCAGGTAGACTGGACGCCAGAGCTGCACAAAAAATTTGTGAAGGCAGTGGAGCAACTAGGCATTAATCACGCTATTCCTTCTCGAATATTGGATCTAATGAAAGTGGAGGGCTTGACAAGGCATAATGTGGCAAGCCATCTTCAGGTTATAATCTACCTTCCCACGGTTTCCAAAAACTATTTCAATACCTCATTCAAAACTGTAATTAATGATAAATTGATATTATATTCATATATCTTCATAGGTAATGCATACTAACATAAGGTCTTTTATTGTTTAAATTCAACCAGAAATATAGAATGCATAAGAGACATATCTTACCGAAGCAGGATGATCGGAAATGGCTAAATACAAGGTAG

Protein sequence

>MS.gene51681.t1

MMKCIELGAVEFLSKPLSEDKLRNIWQHVVHKAFNAGVSALSESLKPVKESVASILQIQTDLSVADTSKCESVVSPQLPNVKVLNNSESNTTSANKVGIRSHKCEIKANRKKMKVDWTPELHKKFVKAVEQLGINHAIPSRILDLMKVEGLTRHNVASHLQKYRMHKRHILPKQDDRKWLNTR