Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52260.t1 | RHN72439.1 | 33.5 | 677 | 166 | 2 | 165 | 557 | 58 | 734 | 7.30E-100 | 374.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52260.t1 | Q5UBY2 | 25.8 | 213 | 153 | 4 | 302 | 512 | 340 | 549 | 3.4e-13 | 78.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52260.t1 | A0A396J342 | 33.5 | 677 | 166 | 2 | 165 | 557 | 58 | 734 | 5.2e-100 | 374.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene52260.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52260.t1 | MTR_7g028855 | 63.487 | 304 | 47 | 5 | 1 | 303 | 1 | 241 | 5.27e-113 | 345 |
| MS.gene52260.t1 | MTR_7g446520 | 55.422 | 249 | 38 | 4 | 54 | 302 | 15 | 190 | 1.97e-75 | 243 |
| MS.gene52260.t1 | MTR_7g446480 | 46.865 | 303 | 42 | 5 | 1 | 303 | 1 | 184 | 1.55e-67 | 222 |
| MS.gene52260.t1 | MTR_7g446510 | 56.627 | 166 | 41 | 3 | 315 | 480 | 23 | 157 | 1.81e-45 | 164 |
| MS.gene52260.t1 | MTR_7g446510 | 80.000 | 45 | 9 | 0 | 259 | 303 | 155 | 199 | 5.86e-16 | 79.7 |
| MS.gene52260.t1 | MTR_1g070355 | 40.000 | 120 | 72 | 0 | 184 | 303 | 76 | 195 | 3.14e-22 | 100 |
| MS.gene52260.t1 | MTR_8g467420 | 46.988 | 83 | 43 | 1 | 165 | 246 | 61 | 143 | 4.54e-19 | 85.1 |
| MS.gene52260.t1 | MTR_8g468460 | 45.918 | 98 | 51 | 2 | 318 | 414 | 9 | 105 | 6.17e-17 | 77.0 |
| MS.gene52260.t1 | MTR_5g076070 | 32.051 | 156 | 103 | 1 | 147 | 302 | 21 | 173 | 4.60e-16 | 79.3 |
| MS.gene52260.t1 | MTR_6g053140 | 31.169 | 154 | 93 | 3 | 124 | 275 | 47 | 189 | 2.51e-15 | 75.5 |
| MS.gene52260.t1 | MTR_0645s0010 | 42.000 | 100 | 57 | 1 | 303 | 401 | 26 | 125 | 3.99e-15 | 72.4 |
| MS.gene52260.t1 | MTR_3g448650 | 42.500 | 80 | 46 | 0 | 178 | 257 | 78 | 157 | 6.71e-14 | 70.5 |
| MS.gene52260.t1 | MTR_0060s0090 | 37.500 | 80 | 50 | 0 | 185 | 264 | 59 | 138 | 1.78e-13 | 68.9 |
| MS.gene52260.t1 | MTR_2g098880 | 40.000 | 110 | 64 | 2 | 176 | 284 | 55 | 163 | 2.79e-13 | 70.5 |
| MS.gene52260.t1 | MTR_2g098880 | 40.367 | 109 | 63 | 2 | 176 | 283 | 67 | 174 | 3.59e-13 | 70.5 |
| MS.gene52260.t1 | MTR_2g101460 | 34.167 | 120 | 79 | 0 | 178 | 297 | 51 | 170 | 6.37e-12 | 65.5 |
| MS.gene52260.t1 | MTR_3g080590 | 50.000 | 58 | 29 | 0 | 175 | 232 | 98 | 155 | 8.30e-12 | 63.9 |
| MS.gene52260.t1 | MTR_2g101460 | 34.167 | 120 | 79 | 0 | 178 | 297 | 41 | 160 | 1.72e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52260.t1 | AT4G38180 | 28.141 | 199 | 137 | 4 | 304 | 499 | 483 | 678 | 3.03e-16 | 82.8 |
| MS.gene52260.t1 | AT4G38180 | 39.831 | 118 | 68 | 3 | 186 | 301 | 77 | 193 | 5.42e-11 | 66.2 |
| MS.gene52260.t1 | AT3G22170 | 23.318 | 223 | 158 | 3 | 268 | 482 | 424 | 641 | 4.91e-15 | 79.0 |
| MS.gene52260.t1 | AT3G22170 | 23.318 | 223 | 158 | 3 | 268 | 482 | 424 | 641 | 4.91e-15 | 79.0 |
| MS.gene52260.t1 | AT4G15090 | 26.203 | 187 | 134 | 2 | 304 | 490 | 459 | 641 | 3.78e-13 | 73.2 |
| MS.gene52260.t1 | AT4G15090 | 26.203 | 187 | 134 | 2 | 304 | 490 | 459 | 641 | 3.78e-13 | 73.2 |
| MS.gene52260.t1 | AT4G15090 | 26.203 | 187 | 134 | 2 | 304 | 490 | 459 | 641 | 3.78e-13 | 73.2 |
| MS.gene52260.t1 | AT4G15090 | 26.203 | 187 | 134 | 2 | 304 | 490 | 459 | 641 | 3.78e-13 | 73.2 |
| MS.gene52260.t1 | AT4G15090 | 26.203 | 187 | 134 | 2 | 304 | 490 | 459 | 641 | 3.78e-13 | 73.2 |
| MS.gene52260.t1 | AT3G07500 | 38.235 | 136 | 74 | 5 | 155 | 287 | 8 | 136 | 1.30e-12 | 67.8 |
| MS.gene52260.t1 | AT4G38170 | 27.389 | 157 | 110 | 3 | 302 | 456 | 246 | 400 | 1.77e-12 | 70.5 |
| MS.gene52260.t1 | AT4G19990 | 27.778 | 180 | 125 | 4 | 304 | 481 | 407 | 583 | 7.68e-12 | 68.9 |
| MS.gene52260.t1 | AT4G19990 | 27.778 | 180 | 125 | 4 | 304 | 481 | 407 | 583 | 7.68e-12 | 68.9 |
| MS.gene52260.t1 | AT2G27110 | 26.257 | 179 | 129 | 3 | 304 | 481 | 428 | 604 | 1.03e-11 | 68.6 |
| MS.gene52260.t1 | AT2G27110 | 26.257 | 179 | 129 | 3 | 304 | 481 | 428 | 604 | 1.03e-11 | 68.6 |
| MS.gene52260.t1 | AT4G19990 | 27.778 | 180 | 125 | 4 | 304 | 481 | 407 | 583 | 1.13e-11 | 68.2 |
| MS.gene52260.t1 | AT4G19990 | 27.778 | 180 | 125 | 4 | 304 | 481 | 407 | 583 | 1.13e-11 | 68.2 |
| MS.gene52260.t1 | AT4G19990 | 27.778 | 180 | 125 | 4 | 304 | 481 | 407 | 583 | 1.21e-11 | 68.2 |
| MS.gene52260.t1 | AT4G19990 | 27.778 | 180 | 125 | 4 | 304 | 481 | 350 | 526 | 1.25e-11 | 68.2 |
| MS.gene52260.t1 | AT4G19990 | 32.576 | 132 | 85 | 3 | 352 | 481 | 468 | 597 | 1.26e-11 | 68.2 |
| MS.gene52260.t1 | AT2G27110 | 26.257 | 179 | 129 | 3 | 304 | 481 | 283 | 459 | 1.98e-11 | 67.4 |
Find 102 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGCCTTTACTGATTT+TGG | 0.059598 | 7.4:-28499467 | MS.gene52260:CDS |
| TGCATTTACACCCTGTTTAT+CGG | 0.264525 | 7.4:-28498608 | MS.gene52260:CDS |
| TGTTCACTACAGACCCAAAA+AGG | 0.266221 | 7.4:-28498694 | MS.gene52260:CDS |
| AAGAGTTATGTTAGGAATAA+AGG | 0.276245 | 7.4:-28497726 | MS.gene52260:CDS |
| CCTGAAGTTCCAATTGTTAC+TGG | 0.294336 | 7.4:-28497087 | MS.gene52260:CDS |
| TTTGTTGCGTTGGACGAAAA+AGG | 0.308114 | 7.4:-28497292 | MS.gene52260:CDS |
| TTGCAGGGAAGTGTCCAAAA+AGG | 0.313369 | 7.4:-28497169 | MS.gene52260:CDS |
| AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 7.4:-28499245 | MS.gene52260:CDS |
| CATTAACTGCTGAAGGAATA+AGG | 0.318241 | 7.4:-28498950 | MS.gene52260:CDS |
| TGCTGAAGGAATAAGGAAAA+TGG | 0.318497 | 7.4:-28498943 | MS.gene52260:CDS |
| CCAGTAACAATTGGAACTTC+AGG | 0.318979 | 7.4:+28497087 | None:intergenic |
| CTGTTAGGAAGAGTGATATT+AGG | 0.340554 | 7.4:-28498857 | MS.gene52260:CDS |
| CATTGGTTGGAGTAGGTTCA+TGG | 0.364482 | 7.4:+28498634 | None:intergenic |
| TGCTCCAAAGAAGAATAAAA+AGG | 0.367722 | 7.4:-28497013 | MS.gene52260:CDS |
| TACATTCTGTTCAACATTCT+CGG | 0.372806 | 7.4:+28499358 | None:intergenic |
| CGCAACAAAATCAAACATTC+AGG | 0.382540 | 7.4:+28497306 | None:intergenic |
| GGAAGTAGATTCTAAGTTGA+TGG | 0.394286 | 7.4:-28497235 | MS.gene52260:CDS |
| GTTGAGTTTCCAGTAACAAT+TGG | 0.399158 | 7.4:+28497078 | None:intergenic |
| GGTACACCGGAACATGATTA+CGG | 0.407134 | 7.4:-28499446 | MS.gene52260:CDS |
| AGCATTTATCAAGGTTAGAT+AGG | 0.409294 | 7.4:-28498767 | MS.gene52260:CDS |
| GATTATAGTGCTGGTGATAA+AGG | 0.421954 | 7.4:-28499221 | MS.gene52260:CDS |
| TATAAGTACGGTAAGTGTAA+TGG | 0.430620 | 7.4:-28498885 | MS.gene52260:CDS |
| GGATGACATACAAAATCTTC+GGG | 0.433514 | 7.4:-28497124 | MS.gene52260:CDS |
| GGAGCACCTTTGCACTTCAC+TGG | 0.435097 | 7.4:+28497030 | None:intergenic |
| CAGTAACAATTGGAACTTCA+GGG | 0.439435 | 7.4:+28497088 | None:intergenic |
| CGAGGCTGCTGAAATCTATA+CGG | 0.448201 | 7.4:-28497574 | MS.gene52260:CDS |
| GATATTAGGCGCAATGTTAA+CGG | 0.449906 | 7.4:-28498843 | MS.gene52260:CDS |
| AAATCATAAAGAGTTATGTT+AGG | 0.452282 | 7.4:-28497734 | MS.gene52260:intron |
| TGGATGACATACAAAATCTT+CGG | 0.452905 | 7.4:-28497125 | MS.gene52260:CDS |
| TAGTGAACACGGAGCCTAGC+TGG | 0.466097 | 7.4:+28498708 | None:intergenic |
| GATGAGCGATATGATGAAAC+TGG | 0.468588 | 7.4:-28499278 | MS.gene52260:CDS |
| TTGATGGAGATTGCTCGATA+TGG | 0.468688 | 7.4:-28497219 | MS.gene52260:CDS |
| GAAACATATCCGATCATTGT+TGG | 0.469215 | 7.4:-28499398 | MS.gene52260:CDS |
| TCTTGAATGTGGACTATTGT+GGG | 0.469444 | 7.4:-28497257 | MS.gene52260:CDS |
| GAGATAAGAAGCATTTATCA+AGG | 0.475640 | 7.4:-28498776 | MS.gene52260:CDS |
| TGATTACGGTTCTACGGATG+TGG | 0.481654 | 7.4:-28499432 | MS.gene52260:CDS |
| TGTTCTGGTGATTATAGTGC+TGG | 0.489646 | 7.4:-28499230 | MS.gene52260:CDS |
| TTCTTGAATGTGGACTATTG+TGG | 0.490201 | 7.4:-28497258 | MS.gene52260:CDS |
| CGCAGATGAGTTGTCAGCAC+AGG | 0.491267 | 7.4:+28497609 | None:intergenic |
| AAACATATCCGATCATTGTT+GGG | 0.491804 | 7.4:-28499397 | MS.gene52260:CDS |
| GTAGAACCGTAATCATGTTC+CGG | 0.492886 | 7.4:+28499440 | None:intergenic |
| TAGCTTGTATGCTGATGTGC+TGG | 0.499229 | 7.4:-28497145 | MS.gene52260:CDS |
| TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 7.4:-28498985 | MS.gene52260:CDS |
| GAAGATGATGATGTAGTTGT+TGG | 0.505754 | 7.4:-28498996 | MS.gene52260:CDS |
| CCTTTGCACTTCACTGGCAA+TGG | 0.506348 | 7.4:+28497036 | None:intergenic |
| GTGAAAGAAGAGATTATGAA+AGG | 0.507624 | 7.4:-28497534 | MS.gene52260:CDS |
| AAGAATACTCAAGGGAATAC+AGG | 0.512005 | 7.4:-28499302 | MS.gene52260:CDS |
| ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 7.4:-28498957 | MS.gene52260:CDS |
| CCGATCATTGTTGGGAGTGG+TGG | 0.525336 | 7.4:-28499389 | MS.gene52260:CDS |
| CGGTGTACCAAAATCAGTAA+AGG | 0.530148 | 7.4:+28499460 | None:intergenic |
| CAGCAATTCAGTGTTCGTGC+AGG | 0.535206 | 7.4:-28497401 | MS.gene52260:CDS |
| CCACCACTCCCAACAATGAT+CGG | 0.545431 | 7.4:+28499389 | None:intergenic |
| GGAACATGATTACGGTTCTA+CGG | 0.552732 | 7.4:-28499438 | MS.gene52260:CDS |
| CAGTATGTATGCAACAAGCA+AGG | 0.557644 | 7.4:-28498804 | MS.gene52260:CDS |
| GAAGATTGGTTTCTTGAATG+TGG | 0.561039 | 7.4:-28497268 | MS.gene52260:CDS |
| TGCAGGAAATTTGAATCTCG+AGG | 0.563863 | 7.4:-28497384 | MS.gene52260:CDS |
| TGTAAATGCACAGCATTGGT+TGG | 0.565762 | 7.4:+28498621 | None:intergenic |
| TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 7.4:-28498980 | MS.gene52260:CDS |
| TATCCGATCATTGTTGGGAG+TGG | 0.573961 | 7.4:-28499392 | MS.gene52260:CDS |
| GCAGGAAATTTGAATCTCGA+GGG | 0.574935 | 7.4:-28497383 | MS.gene52260:CDS |
| GCAGATGAGTTGTCAGCACA+GGG | 0.575960 | 7.4:+28497610 | None:intergenic |
| AGGGTGTAAATGCACAGCAT+TGG | 0.584309 | 7.4:+28498617 | None:intergenic |
| AATTATACGAAGAATACTCA+AGG | 0.584441 | 7.4:-28499311 | MS.gene52260:CDS |
| GTTAACAAAATATCTTGAGG+AGG | 0.587475 | 7.4:-28497457 | MS.gene52260:CDS |
| GATGAAGGTGAAGGTGATGA+AGG | 0.589312 | 7.4:-28499146 | MS.gene52260:CDS |
| GATGAAGGTGAACGTGATGA+AGG | 0.589312 | 7.4:-28499161 | MS.gene52260:CDS |
| GGTGATAAAGGTGAAGATGA+TGG | 0.589452 | 7.4:-28499209 | MS.gene52260:CDS |
| AGTATGTATGCAACAAGCAA+GGG | 0.595988 | 7.4:-28498803 | MS.gene52260:CDS |
| GATGAAGGTGAATGTGATGA+AGG | 0.602180 | 7.4:-28499131 | MS.gene52260:CDS |
| GGAGACAATGAAAGTGATGA+TGG | 0.609236 | 7.4:-28499257 | MS.gene52260:CDS |
| CTGGCAATGGATCACGTATG+TGG | 0.614693 | 7.4:+28497049 | None:intergenic |
| AGTGAAGGTCATGGTAGTGA+AGG | 0.614950 | 7.4:-28499035 | MS.gene52260:CDS |
| TCTGCGTTGTCTTGAACGCG+AGG | 0.617404 | 7.4:-28497592 | MS.gene52260:CDS |
| GATGAAAGTCAAGGTGATGA+AGG | 0.618015 | 7.4:-28499176 | MS.gene52260:CDS |
| GTAAGAAAATGTTCAAACTG+TGG | 0.620533 | 7.4:-28496979 | MS.gene52260:CDS |
| TTAACAAAATATCTTGAGGA+GGG | 0.626522 | 7.4:-28497456 | MS.gene52260:CDS |
| GAAGGTGAATGTGATGAAGG+TGG | 0.638524 | 7.4:-28499128 | MS.gene52260:CDS |
| TGCACAGCATTGGTTGGAGT+AGG | 0.638605 | 7.4:+28498627 | None:intergenic |
| TGTTACTGGAAACTCAACAA+TGG | 0.640006 | 7.4:-28497073 | MS.gene52260:CDS |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 7.4:-28498722 | MS.gene52260:CDS |
| GGTGAATGTGATGAAGGTGG+AGG | 0.647603 | 7.4:-28499125 | MS.gene52260:CDS |
| CAGGAAATTTGAATCTCGAG+GGG | 0.648693 | 7.4:-28497382 | MS.gene52260:CDS |
| GAAGTTAACAAAATATCTTG+AGG | 0.653773 | 7.4:-28497460 | MS.gene52260:CDS |
| ATTATACGAAGAATACTCAA+GGG | 0.665058 | 7.4:-28499310 | MS.gene52260:CDS |
| TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 7.4:-28498991 | MS.gene52260:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 7.4:-28499044 | MS.gene52260:CDS |
| CTTGAATGTGGACTATTGTG+GGG | 0.678410 | 7.4:-28497256 | MS.gene52260:CDS |
| GGTGAACGTGATGAAGGTGA+AGG | 0.680195 | 7.4:-28499155 | MS.gene52260:CDS |
| TTAACGGTGAGATTGTAATG+AGG | 0.680367 | 7.4:-28498827 | MS.gene52260:CDS |
| GATGATGATGATGTGAGTCA+TGG | 0.683220 | 7.4:-28499335 | MS.gene52260:CDS |
| AGGTGTTGCACTGAGTGTGA+AGG | 0.686205 | 7.4:-28497514 | MS.gene52260:CDS |
| CCATTGCCAGTGAAGTGCAA+AGG | 0.692298 | 7.4:-28497036 | MS.gene52260:CDS |
| AGTGAAGGTCATGATAGTGA+AGG | 0.697984 | 7.4:-28499080 | MS.gene52260:CDS |
| GGTGGAGGTGATGAAAGTGA+AGG | 0.700815 | 7.4:-28499110 | MS.gene52260:CDS |
| TGTTTATCGGAAAATATCCG+AGG | 0.704996 | 7.4:-28498595 | MS.gene52260:intron |
| GACAATGAAAGTGATGATGG+TGG | 0.706532 | 7.4:-28499254 | MS.gene52260:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.709365 | 7.4:-28499065 | MS.gene52260:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 7.4:-28499050 | MS.gene52260:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 7.4:-28499095 | MS.gene52260:CDS |
| AGTGAATGCGATGAAAGTCA+AGG | 0.740679 | 7.4:-28499185 | MS.gene52260:CDS |
| ACTTTGTACGAGTGATACGT+CGG | 0.754568 | 7.4:+28498733 | None:intergenic |
| CAGATGAGTTGTCAGCACAG+GGG | 0.773409 | 7.4:+28497611 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACGATTTTTATTATAAGTA+CGG | - | chr7.4:28497503-28497522 | MS.gene52260:CDS | 15.0% |
| !! | AAATCATAAAGAGTTATGTT+AGG | - | chr7.4:28498666-28498685 | MS.gene52260:CDS | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr7.4:28497865-28497884 | MS.gene52260:intron | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr7.4:28497866-28497885 | MS.gene52260:intron | 20.0% |
| !! | CTTCAACACAAAAAAAATAT+GGG | + | chr7.4:28499053-28499072 | None:intergenic | 20.0% |
| ! | AAACAATAGACACTTATATG+TGG | - | chr7.4:28498261-28498280 | MS.gene52260:intron | 25.0% |
| ! | AACAATAGACACTTATATGT+GGG | - | chr7.4:28498262-28498281 | MS.gene52260:intron | 25.0% |
| ! | AAGAGTTATGTTAGGAATAA+AGG | - | chr7.4:28498674-28498693 | MS.gene52260:CDS | 25.0% |
| ! | AATTATACGAAGAATACTCA+AGG | - | chr7.4:28497089-28497108 | MS.gene52260:CDS | 25.0% |
| ! | ACTTAACATTCAGATAGTTT+AGG | + | chr7.4:28498010-28498029 | None:intergenic | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr7.4:28497443-28497462 | MS.gene52260:CDS | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | - | chr7.4:28498574-28498593 | MS.gene52260:intron | 25.0% |
| ! | ATTATACGAAGAATACTCAA+GGG | - | chr7.4:28497090-28497109 | MS.gene52260:CDS | 25.0% |
| ! | CCTTCAACACAAAAAAAATA+TGG | + | chr7.4:28499054-28499073 | None:intergenic | 25.0% |
| ! | CTTAACATTCAGATAGTTTA+GGG | + | chr7.4:28498009-28498028 | None:intergenic | 25.0% |
| ! | GAAGTTAACAAAATATCTTG+AGG | - | chr7.4:28498940-28498959 | MS.gene52260:CDS | 25.0% |
| ! | GAATATTCATAAAAGGAATG+TGG | + | chr7.4:28498044-28498063 | None:intergenic | 25.0% |
| ! | TTAACAAAATATCTTGAGGA+GGG | - | chr7.4:28498944-28498963 | MS.gene52260:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | - | chr7.4:28498475-28498494 | MS.gene52260:intron | 25.0% |
| !! | ATGTGTTTACAAATTTTTGC+AGG | - | chr7.4:28499215-28499234 | MS.gene52260:CDS | 25.0% |
| !! | GAACATTTTCTTACAAACTT+TGG | + | chr7.4:28499415-28499434 | None:intergenic | 25.0% |
| !! | TGTGTTTACAAATTTTTGCA+GGG | - | chr7.4:28499216-28499235 | MS.gene52260:CDS | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | + | chr7.4:28498570-28498589 | None:intergenic | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | - | chr7.4:28498079-28498098 | MS.gene52260:intron | 25.0% |
| !!! | AGATCAGATTATTTTTGCTT+TGG | - | chr7.4:28498116-28498135 | MS.gene52260:intron | 25.0% |
| !!! | CCATATTTTTTTTGTGTTGA+AGG | - | chr7.4:28499051-28499070 | MS.gene52260:CDS | 25.0% |
| !!! | TTGTAGCTGATTTTAAATTC+AGG | - | chr7.4:28498759-28498778 | MS.gene52260:CDS | 25.0% |
| AAAAATGTGCGCTGTTATTA+AGG | - | chr7.4:28497965-28497984 | MS.gene52260:intron | 30.0% | |
| AAACATATCCGATCATTGTT+GGG | - | chr7.4:28497003-28497022 | MS.gene52260:CDS | 30.0% | |
| AATCTATGCTTTATCTACCT+CGG | + | chr7.4:28497825-28497844 | None:intergenic | 30.0% | |
| ACAAAAAAAATATGGGAGCA+TGG | + | chr7.4:28499046-28499065 | None:intergenic | 30.0% | |
| AGCATTTATCAAGGTTAGAT+AGG | - | chr7.4:28497633-28497652 | MS.gene52260:CDS | 30.0% | |
| AGTGGCAGAATATTCATAAA+AGG | + | chr7.4:28498051-28498070 | None:intergenic | 30.0% | |
| CAAATATAACTGTTTGTGAG+TGG | + | chr7.4:28498220-28498239 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | - | chr7.4:28498218-28498237 | MS.gene52260:intron | 30.0% | |
| CATATGAGAACAAAGAATTG+TGG | - | chr7.4:28498573-28498592 | MS.gene52260:intron | 30.0% | |
| GTAAGAAAATGTTCAAACTG+TGG | - | chr7.4:28499421-28499440 | MS.gene52260:CDS | 30.0% | |
| GTAGATAAAGCATAGATTGA+TGG | - | chr7.4:28497827-28497846 | MS.gene52260:intron | 30.0% | |
| GTGAAAGAAGAGATTATGAA+AGG | - | chr7.4:28498866-28498885 | MS.gene52260:CDS | 30.0% | |
| GTTAACAAAATATCTTGAGG+AGG | - | chr7.4:28498943-28498962 | MS.gene52260:CDS | 30.0% | |
| TACATTCTGTTCAACATTCT+CGG | + | chr7.4:28497045-28497064 | None:intergenic | 30.0% | |
| TATAAGTACGGTAAGTGTAA+TGG | - | chr7.4:28497515-28497534 | MS.gene52260:CDS | 30.0% | |
| TGCTCCAAAGAAGAATAAAA+AGG | - | chr7.4:28499387-28499406 | MS.gene52260:CDS | 30.0% | |
| TGGATGACATACAAAATCTT+CGG | - | chr7.4:28499275-28499294 | MS.gene52260:CDS | 30.0% | |
| ! | AATGTACTCTAATTTTACGG+AGG | - | chr7.4:28498478-28498497 | MS.gene52260:intron | 30.0% |
| ! | ACAACATATCTACCCTTTTT+GGG | + | chr7.4:28497722-28497741 | None:intergenic | 30.0% |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | - | chr7.4:28498290-28498309 | MS.gene52260:intron | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | - | chr7.4:28498498-28498517 | MS.gene52260:intron | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | - | chr7.4:28498500-28498519 | MS.gene52260:intron | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | - | chr7.4:28498499-28498518 | MS.gene52260:intron | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | - | chr7.4:28497874-28497893 | MS.gene52260:intron | 30.0% |
| !! | AATGTTTGATTTTGTTGCGT+TGG | - | chr7.4:28499098-28499117 | MS.gene52260:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | - | chr7.4:28498501-28498520 | MS.gene52260:intron | 30.0% |
| !! | GACGTTTGAAATGTCTATTT+TGG | - | chr7.4:28498078-28498097 | MS.gene52260:intron | 30.0% |
| !! | GAGATAAGAAGCATTTATCA+AGG | - | chr7.4:28497624-28497643 | MS.gene52260:CDS | 30.0% |
| !!! | AACAATGCCTTTACTGATTT+TGG | - | chr7.4:28496933-28496952 | MS.gene52260:CDS | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+AGG | - | chr7.4:28498443-28498462 | MS.gene52260:intron | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | - | chr7.4:28497737-28497756 | MS.gene52260:intron | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | - | chr7.4:28498439-28498458 | MS.gene52260:intron | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | - | chr7.4:28497736-28497755 | MS.gene52260:intron | 30.0% |
| AAGAATACTCAAGGGAATAC+AGG | - | chr7.4:28497098-28497117 | MS.gene52260:CDS | 35.0% | |
| AGTATGTATGCAACAAGCAA+GGG | - | chr7.4:28497597-28497616 | MS.gene52260:CDS | 35.0% | |
| ATGGAATTGAGAACAATCCA+TGG | - | chr7.4:28498540-28498559 | MS.gene52260:intron | 35.0% | |
| CAGTAACAATTGGAACTTCA+GGG | + | chr7.4:28499315-28499334 | None:intergenic | 35.0% | |
| CATTAACTGCTGAAGGAATA+AGG | - | chr7.4:28497450-28497469 | MS.gene52260:CDS | 35.0% | |
| CCAAAAGCAGTTGTAACAAA+TGG | - | chr7.4:28498323-28498342 | MS.gene52260:intron | 35.0% | |
| CGCAACAAAATCAAACATTC+AGG | + | chr7.4:28499097-28499116 | None:intergenic | 35.0% | |
| CTGTTAGGAAGAGTGATATT+AGG | - | chr7.4:28497543-28497562 | MS.gene52260:CDS | 35.0% | |
| GAAACATATCCGATCATTGT+TGG | - | chr7.4:28497002-28497021 | MS.gene52260:CDS | 35.0% | |
| GATATTAGGCGCAATGTTAA+CGG | - | chr7.4:28497557-28497576 | MS.gene52260:CDS | 35.0% | |
| GGATGACATACAAAATCTTC+GGG | - | chr7.4:28499276-28499295 | MS.gene52260:CDS | 35.0% | |
| GTGAAGGAAAAAGAAGTGAA+TGG | - | chr7.4:28498902-28498921 | MS.gene52260:CDS | 35.0% | |
| GTTGAGTTTCCAGTAACAAT+TGG | + | chr7.4:28499325-28499344 | None:intergenic | 35.0% | |
| TCCCATACAATCTAGAAAAC+TGG | + | chr7.4:28498294-28498313 | None:intergenic | 35.0% | |
| TGCATTTACACCCTGTTTAT+CGG | - | chr7.4:28497792-28497811 | MS.gene52260:intron | 35.0% | |
| TGCTGAAGGAATAAGGAAAA+TGG | - | chr7.4:28497457-28497476 | MS.gene52260:CDS | 35.0% | |
| TGGAATTGAGAACAATCCAT+GGG | - | chr7.4:28498541-28498560 | MS.gene52260:intron | 35.0% | |
| TGTTACTGGAAACTCAACAA+TGG | - | chr7.4:28499327-28499346 | MS.gene52260:CDS | 35.0% | |
| TGTTTATCGGAAAATATCCG+AGG | - | chr7.4:28497805-28497824 | MS.gene52260:intron | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | - | chr7.4:28497573-28497592 | MS.gene52260:CDS | 35.0% | |
| ! | CACAACATATCTACCCTTTT+TGG | + | chr7.4:28497723-28497742 | None:intergenic | 35.0% |
| ! | CGGATATTTTCCGATAAACA+GGG | + | chr7.4:28497805-28497824 | None:intergenic | 35.0% |
| ! | GAAGATGATGATGTAGTTGT+TGG | - | chr7.4:28497404-28497423 | MS.gene52260:CDS | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | - | chr7.4:28498289-28498308 | MS.gene52260:intron | 35.0% |
| ! | GGAAGTAGATTCTAAGTTGA+TGG | - | chr7.4:28499165-28499184 | MS.gene52260:CDS | 35.0% |
| ! | GGTGCCTTTTTATTCTTCTT+TGG | + | chr7.4:28499394-28499413 | None:intergenic | 35.0% |
| ! | TCATATAATGGGATACATGG+TGG | - | chr7.4:28497877-28497896 | MS.gene52260:intron | 35.0% |
| ! | TCGGATATTTTCCGATAAAC+AGG | + | chr7.4:28497806-28497825 | None:intergenic | 35.0% |
| ! | TCTTGAATGTGGACTATTGT+GGG | - | chr7.4:28499143-28499162 | MS.gene52260:CDS | 35.0% |
| ! | TTCTTGAATGTGGACTATTG+TGG | - | chr7.4:28499142-28499161 | MS.gene52260:CDS | 35.0% |
| !! | AAATGTCTATTTTGGGCAGA+TGG | - | chr7.4:28498086-28498105 | MS.gene52260:intron | 35.0% |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | chr7.4:28498229-28498248 | MS.gene52260:intron | 35.0% |
| !! | ATTTCTGCACAATTTTGACG+AGG | - | chr7.4:28498709-28498728 | MS.gene52260:CDS | 35.0% |
| !! | CCATTTGTTACAACTGCTTT+TGG | + | chr7.4:28498326-28498345 | None:intergenic | 35.0% |
| !! | GAAGATTGGTTTCTTGAATG+TGG | - | chr7.4:28499132-28499151 | MS.gene52260:CDS | 35.0% |
| !! | GATTATAGTGCTGGTGATAA+AGG | - | chr7.4:28497179-28497198 | MS.gene52260:CDS | 35.0% |
| !!! | AGTGTAATGGTTTTGCTGTT+AGG | - | chr7.4:28497528-28497547 | MS.gene52260:CDS | 35.0% |
| !!! | CTTTACTGATTTTGGTACAC+CGG | - | chr7.4:28496941-28496960 | MS.gene52260:CDS | 35.0% |
| !!! | TCATATGTTTTGGTAACCCA+TGG | + | chr7.4:28498560-28498579 | None:intergenic | 35.0% |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | - | chr7.4:28498502-28498521 | MS.gene52260:intron | 35.0% |
| !!! | TTATTTTTGCTTTGGCGATG+TGG | - | chr7.4:28498124-28498143 | MS.gene52260:intron | 35.0% |
| AAAAAGACGTTCAGTGTCTG+CGG | + | chr7.4:28499476-28499495 | None:intergenic | 40.0% | |
| AAAGGAATGTGGATCAGTTG+AGG | + | chr7.4:28498033-28498052 | None:intergenic | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | + | chr7.4:28498184-28498203 | None:intergenic | 40.0% | |
| ACTTTGTACGAGTGATACGT+CGG | + | chr7.4:28497670-28497689 | None:intergenic | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr7.4:28497305-28497324 | MS.gene52260:CDS | 40.0% | |
| AGTGAATGCGATGAAAGTCA+AGG | - | chr7.4:28497215-28497234 | MS.gene52260:CDS | 40.0% | |
| ATGTGCGCTGTTATTAAGGA+TGG | - | chr7.4:28497969-28497988 | MS.gene52260:intron | 40.0% | |
| CAGGAAATTTGAATCTCGAG+GGG | - | chr7.4:28499018-28499037 | MS.gene52260:CDS | 40.0% | |
| CAGTATGTATGCAACAAGCA+AGG | - | chr7.4:28497596-28497615 | MS.gene52260:CDS | 40.0% | |
| CCAGTAACAATTGGAACTTC+AGG | + | chr7.4:28499316-28499335 | None:intergenic | 40.0% | |
| CCTGAAGTTCCAATTGTTAC+TGG | - | chr7.4:28499313-28499332 | MS.gene52260:CDS | 40.0% | |
| CGGTGTACCAAAATCAGTAA+AGG | + | chr7.4:28496943-28496962 | None:intergenic | 40.0% | |
| GAACAAATACCACTATCCGT+TGG | - | chr7.4:28498172-28498191 | MS.gene52260:intron | 40.0% | |
| GATGAAAGTCAAGGTGATGA+AGG | - | chr7.4:28497224-28497243 | MS.gene52260:CDS | 40.0% | |
| GATGAAGGTGAATGTGATGA+AGG | - | chr7.4:28497269-28497288 | MS.gene52260:CDS | 40.0% | |
| GATGAGCGATATGATGAAAC+TGG | - | chr7.4:28497122-28497141 | MS.gene52260:CDS | 40.0% | |
| GCAGGAAATTTGAATCTCGA+GGG | - | chr7.4:28499017-28499036 | MS.gene52260:CDS | 40.0% | |
| GCAGTTGTAACAAATGGTGA+CGG | - | chr7.4:28498329-28498348 | MS.gene52260:intron | 40.0% | |
| GCATCTGAACAAGAATGCTA+TGG | - | chr7.4:28498412-28498431 | MS.gene52260:intron | 40.0% | |
| GGAACATGATTACGGTTCTA+CGG | - | chr7.4:28496962-28496981 | MS.gene52260:CDS | 40.0% | |
| GGAGACAATGAAAGTGATGA+TGG | - | chr7.4:28497143-28497162 | MS.gene52260:CDS | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | - | chr7.4:28497191-28497210 | MS.gene52260:CDS | 40.0% | |
| GTAGAACCGTAATCATGTTC+CGG | + | chr7.4:28496963-28496982 | None:intergenic | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | chr7.4:28497707-28497726 | MS.gene52260:CDS | 40.0% | |
| TACCTGCGTGACAATTTCTT+TGG | - | chr7.4:28498605-28498624 | MS.gene52260:CDS | 40.0% | |
| TGCAGGAAATTTGAATCTCG+AGG | - | chr7.4:28499016-28499035 | MS.gene52260:CDS | 40.0% | |
| TGTTCACTACAGACCCAAAA+AGG | - | chr7.4:28497706-28497725 | MS.gene52260:CDS | 40.0% | |
| TGTTCTGGTGATTATAGTGC+TGG | - | chr7.4:28497170-28497189 | MS.gene52260:CDS | 40.0% | |
| TTGATGGAGATTGCTCGATA+TGG | - | chr7.4:28499181-28499200 | MS.gene52260:CDS | 40.0% | |
| TTTCAAACGTCTGTCATCAG+TGG | + | chr7.4:28498069-28498088 | None:intergenic | 40.0% | |
| TTTCTTAGTGAACCCAACAC+CGG | + | chr7.4:28497921-28497940 | None:intergenic | 40.0% | |
| TTTGTTGCGTTGGACGAAAA+AGG | - | chr7.4:28499108-28499127 | MS.gene52260:CDS | 40.0% | |
| ! | AGCATACAAGCTACCCTTTT+TGG | + | chr7.4:28499248-28499267 | None:intergenic | 40.0% |
| ! | AGTGAAGGTCATGATAGTGA+AGG | - | chr7.4:28497320-28497339 | MS.gene52260:CDS | 40.0% |
| ! | ATTGATGGTCTTCAGTCACA+CGG | - | chr7.4:28497842-28497861 | MS.gene52260:intron | 40.0% |
| ! | CTTGAATGTGGACTATTGTG+GGG | - | chr7.4:28499144-28499163 | MS.gene52260:CDS | 40.0% |
| ! | GATGATGATGATGTGAGTCA+TGG | - | chr7.4:28497065-28497084 | MS.gene52260:CDS | 40.0% |
| ! | TGATGATGTAGTTGTTGGTG+AGG | - | chr7.4:28497409-28497428 | MS.gene52260:CDS | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr7.4:28497415-28497434 | MS.gene52260:CDS | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr7.4:28497420-28497439 | MS.gene52260:CDS | 40.0% |
| !! | AAATGGTGACGGTTCTATGA+GGG | - | chr7.4:28498340-28498359 | MS.gene52260:intron | 40.0% |
| !! | AATTTTGACGAGGCAATGAG+AGG | - | chr7.4:28498719-28498738 | MS.gene52260:CDS | 40.0% |
| !! | GACAATGAAAGTGATGATGG+TGG | - | chr7.4:28497146-28497165 | MS.gene52260:CDS | 40.0% |
| !! | TGTAAATGCACAGCATTGGT+TGG | + | chr7.4:28497782-28497801 | None:intergenic | 40.0% |
| !! | TTTTGGGTCTGTAGTGAACA+CGG | + | chr7.4:28497706-28497725 | None:intergenic | 40.0% |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | - | chr7.4:28498185-28498204 | MS.gene52260:intron | 40.0% |
| AGGGTGTAAATGCACAGCAT+TGG | + | chr7.4:28497786-28497805 | None:intergenic | 45.0% | |
| CACCAAAGAAATTGTCACGC+AGG | + | chr7.4:28498610-28498629 | None:intergenic | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | + | chr7.4:28498191-28498210 | None:intergenic | 45.0% | |
| CGAGGCTGCTGAAATCTATA+CGG | - | chr7.4:28498826-28498845 | MS.gene52260:CDS | 45.0% | |
| CTGCGTGACAATTTCTTTGG+TGG | - | chr7.4:28498608-28498627 | MS.gene52260:CDS | 45.0% | |
| GAAGGTGAATGTGATGAAGG+TGG | - | chr7.4:28497272-28497291 | MS.gene52260:CDS | 45.0% | |
| GATGAAGGTGAACGTGATGA+AGG | - | chr7.4:28497239-28497258 | MS.gene52260:CDS | 45.0% | |
| GATGAAGGTGAAGGTGATGA+AGG | - | chr7.4:28497254-28497273 | MS.gene52260:CDS | 45.0% | |
| GGTACACCGGAACATGATTA+CGG | - | chr7.4:28496954-28496973 | MS.gene52260:CDS | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr7.4:28497311-28497330 | MS.gene52260:CDS | 45.0% | |
| TATCCGATCATTGTTGGGAG+TGG | - | chr7.4:28497008-28497027 | MS.gene52260:CDS | 45.0% | |
| TGATTACGGTTCTACGGATG+TGG | - | chr7.4:28496968-28496987 | MS.gene52260:CDS | 45.0% | |
| TGGACGAAAAAGGCGAAGAT+TGG | - | chr7.4:28499118-28499137 | MS.gene52260:CDS | 45.0% | |
| TTCTATGAGGGAGGCGATAA+AGG | - | chr7.4:28498352-28498371 | MS.gene52260:intron | 45.0% | |
| TTCTTAGTGAACCCAACACC+GGG | + | chr7.4:28497920-28497939 | None:intergenic | 45.0% | |
| ! | AGTGAAGGTCATGGTAGTGA+AGG | - | chr7.4:28497365-28497384 | MS.gene52260:CDS | 45.0% |
| ! | AGTGTCTGCGGAACATTTTC+TGG | + | chr7.4:28499464-28499483 | None:intergenic | 45.0% |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | + | chr7.4:28497769-28497788 | None:intergenic | 45.0% |
| ! | TAGCTTGTATGCTGATGTGC+TGG | - | chr7.4:28499255-28499274 | MS.gene52260:CDS | 45.0% |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr7.4:28497155-28497174 | MS.gene52260:CDS | 45.0% |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr7.4:28498235-28498254 | MS.gene52260:intron | 45.0% |
| !! | CAAATGGTGACGGTTCTATG+AGG | - | chr7.4:28498339-28498358 | MS.gene52260:intron | 45.0% |
| !! | TGCAGGGAAGTGTCCAAAAA+GGG | - | chr7.4:28499232-28499251 | MS.gene52260:CDS | 45.0% |
| !! | TTGCAGGGAAGTGTCCAAAA+AGG | - | chr7.4:28499231-28499250 | MS.gene52260:CDS | 45.0% |
| CAGATGAGTTGTCAGCACAG+GGG | + | chr7.4:28498792-28498811 | None:intergenic | 50.0% | |
| CAGCAATTCAGTGTTCGTGC+AGG | - | chr7.4:28498999-28499018 | MS.gene52260:CDS | 50.0% | |
| CATAGACGATGACGCGTACT+TGG | + | chr7.4:28498386-28498405 | None:intergenic | 50.0% | |
| CCACCACTCCCAACAATGAT+CGG | + | chr7.4:28497014-28497033 | None:intergenic | 50.0% | |
| CCATTGCCAGTGAAGTGCAA+AGG | - | chr7.4:28499364-28499383 | MS.gene52260:CDS | 50.0% | |
| CCTTTGCACTTCACTGGCAA+TGG | + | chr7.4:28499367-28499386 | None:intergenic | 50.0% | |
| CTGGCAATGGATCACGTATG+TGG | + | chr7.4:28499354-28499373 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | + | chr7.4:28498793-28498812 | None:intergenic | 50.0% | |
| GGATACATGGTGGCTCAGAA+GGG | - | chr7.4:28497887-28497906 | MS.gene52260:intron | 50.0% | |
| GGTGAACGTGATGAAGGTGA+AGG | - | chr7.4:28497245-28497264 | MS.gene52260:CDS | 50.0% | |
| GGTGAATGTGATGAAGGTGG+AGG | - | chr7.4:28497275-28497294 | MS.gene52260:CDS | 50.0% | |
| GGTGGAGGTGATGAAAGTGA+AGG | - | chr7.4:28497290-28497309 | MS.gene52260:CDS | 50.0% | |
| TATGAGGGAGGCGATAAAGG+CGG | - | chr7.4:28498355-28498374 | MS.gene52260:intron | 50.0% | |
| ! | AGGTGTTGCACTGAGTGTGA+AGG | - | chr7.4:28498886-28498905 | MS.gene52260:CDS | 50.0% |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr7.4:28497678-28497697 | MS.gene52260:CDS | 50.0% |
| !! | TGCACAGCATTGGTTGGAGT+AGG | + | chr7.4:28497776-28497795 | None:intergenic | 50.0% |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | - | chr7.4:28498508-28498527 | MS.gene52260:intron | 50.0% |
| AAGGGTGGATATCCCGGTGT+TGG | - | chr7.4:28497905-28497924 | MS.gene52260:intron | 55.0% | |
| AGGGTGGATATCCCGGTGTT+GGG | - | chr7.4:28497906-28497925 | MS.gene52260:intron | 55.0% | |
| CCGATCATTGTTGGGAGTGG+TGG | - | chr7.4:28497011-28497030 | MS.gene52260:CDS | 55.0% | |
| CGCAGATGAGTTGTCAGCAC+AGG | + | chr7.4:28498794-28498813 | None:intergenic | 55.0% | |
| CGCGTCATCGTCTATGTGCT+TGG | - | chr7.4:28498390-28498409 | MS.gene52260:intron | 55.0% | |
| GCTCAGAAGGGTGGATATCC+CGG | - | chr7.4:28497899-28497918 | MS.gene52260:intron | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | - | chr7.4:28497886-28497905 | MS.gene52260:intron | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | - | chr7.4:28497890-28497909 | MS.gene52260:intron | 55.0% | |
| TAGTGAACACGGAGCCTAGC+TGG | + | chr7.4:28497695-28497714 | None:intergenic | 55.0% | |
| TCTGCGTTGTCTTGAACGCG+AGG | - | chr7.4:28498808-28498827 | MS.gene52260:CDS | 55.0% | |
| ! | GGAGCACCTTTGCACTTCAC+TGG | + | chr7.4:28499373-28499392 | None:intergenic | 55.0% |
| !! | GGGGACTTGGTGAGGGAAAA+TGG | - | chr7.4:28498521-28498540 | MS.gene52260:intron | 55.0% |
| !! | TGGTGACGGTTCTATGAGGG+AGG | - | chr7.4:28498343-28498362 | MS.gene52260:intron | 55.0% |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | - | chr7.4:28498513-28498532 | MS.gene52260:intron | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | - | chr7.4:28498514-28498533 | MS.gene52260:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 28496921 | 28499501 | 28496921 | ID=MS.gene52260 |
| chr7.4 | mRNA | 28496921 | 28499501 | 28496921 | ID=MS.gene52260.t1;Parent=MS.gene52260 |
| chr7.4 | exon | 28498596 | 28499501 | 28498596 | ID=MS.gene52260.t1.exon1;Parent=MS.gene52260.t1 |
| chr7.4 | CDS | 28498596 | 28499501 | 28498596 | ID=cds.MS.gene52260.t1;Parent=MS.gene52260.t1 |
| chr7.4 | exon | 28496921 | 28497745 | 28496921 | ID=MS.gene52260.t1.exon2;Parent=MS.gene52260.t1 |
| chr7.4 | CDS | 28496921 | 28497745 | 28496921 | ID=cds.MS.gene52260.t1;Parent=MS.gene52260.t1 |
| Gene Sequence |
| Protein sequence |
