Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52521.t1 | XP_024632961.1 | 89.3 | 804 | 55 | 4 | 1 | 773 | 1 | 804 | 0.00E+00 | 1371.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52521.t1 | Q9SZL8 | 25.0 | 632 | 389 | 15 | 50 | 662 | 72 | 637 | 6.9e-54 | 213.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52521.t1 | D3YBB9 | 78.3 | 745 | 127 | 4 | 44 | 761 | 76 | 812 | 0.0e+00 | 1163.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene52521.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52521.t1 | MTR_1g083640 | 93.594 | 281 | 18 | 0 | 1 | 281 | 1 | 281 | 0.0 | 547 |
MS.gene52521.t1 | MTR_0558s0020 | 82.958 | 311 | 21 | 2 | 1 | 294 | 1 | 296 | 0.0 | 522 |
MS.gene52521.t1 | MTR_2g014100 | 86.957 | 253 | 24 | 2 | 1 | 252 | 1 | 245 | 6.09e-154 | 448 |
MS.gene52521.t1 | MTR_8g446020 | 70.096 | 311 | 21 | 4 | 1 | 294 | 1 | 256 | 4.46e-139 | 410 |
MS.gene52521.t1 | MTR_6g090505 | 81.857 | 237 | 26 | 1 | 81 | 300 | 1 | 237 | 1.52e-130 | 392 |
MS.gene52521.t1 | MTR_6g090505 | 63.063 | 111 | 14 | 2 | 386 | 494 | 221 | 306 | 1.57e-33 | 133 |
MS.gene52521.t1 | MTR_6g090505 | 88.372 | 43 | 5 | 0 | 570 | 612 | 320 | 362 | 1.04e-16 | 83.2 |
MS.gene52521.t1 | MTR_3g008240 | 84.862 | 218 | 18 | 1 | 1 | 218 | 1 | 203 | 2.96e-127 | 378 |
MS.gene52521.t1 | MTR_4g040430 | 84.404 | 218 | 14 | 3 | 1 | 218 | 1 | 198 | 1.14e-122 | 366 |
MS.gene52521.t1 | MTR_0337s0040 | 68.000 | 275 | 34 | 2 | 1 | 275 | 1 | 221 | 4.61e-119 | 358 |
MS.gene52521.t1 | MTR_0337s0060 | 60.191 | 314 | 27 | 4 | 446 | 756 | 21 | 239 | 5.25e-111 | 337 |
MS.gene52521.t1 | MTR_5g071590 | 86.413 | 184 | 22 | 1 | 1 | 184 | 1 | 181 | 2.26e-110 | 333 |
MS.gene52521.t1 | MTR_1g055240 | 92.308 | 143 | 11 | 0 | 106 | 248 | 2 | 144 | 3.61e-90 | 280 |
MS.gene52521.t1 | MTR_0019s0290 | 88.158 | 152 | 18 | 0 | 98 | 249 | 9 | 160 | 1.12e-89 | 279 |
MS.gene52521.t1 | MTR_3g028680 | 79.630 | 162 | 30 | 1 | 615 | 773 | 1 | 162 | 1.12e-81 | 259 |
MS.gene52521.t1 | MTR_2g067090 | 80.503 | 159 | 28 | 1 | 618 | 773 | 99 | 257 | 5.60e-79 | 256 |
MS.gene52521.t1 | MTR_4g133495 | 67.403 | 181 | 30 | 3 | 573 | 747 | 88 | 245 | 3.13e-70 | 232 |
MS.gene52521.t1 | MTR_4g133340 | 67.403 | 181 | 30 | 3 | 573 | 747 | 88 | 245 | 3.13e-70 | 232 |
MS.gene52521.t1 | MTR_1281s0010 | 95.413 | 109 | 5 | 0 | 35 | 143 | 1 | 109 | 3.35e-68 | 220 |
MS.gene52521.t1 | MTR_2g067130 | 87.805 | 82 | 10 | 0 | 692 | 773 | 46 | 127 | 3.15e-40 | 145 |
MS.gene52521.t1 | MTR_8g046060 | 76.042 | 96 | 14 | 2 | 1 | 95 | 91 | 178 | 1.75e-35 | 134 |
MS.gene52521.t1 | MTR_4g008820 | 75.789 | 95 | 8 | 1 | 1 | 95 | 125 | 204 | 1.68e-34 | 140 |
MS.gene52521.t1 | MTR_6g051425 | 27.844 | 334 | 188 | 8 | 56 | 351 | 22 | 340 | 4.26e-28 | 116 |
MS.gene52521.t1 | MTR_1g013060 | 29.545 | 220 | 134 | 8 | 56 | 272 | 29 | 230 | 3.78e-13 | 70.1 |
MS.gene52521.t1 | MTR_0402s0040 | 24.324 | 185 | 121 | 4 | 65 | 249 | 40 | 205 | 1.96e-12 | 70.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52521.t1 | AT4G38180 | 25.000 | 632 | 389 | 15 | 50 | 662 | 72 | 637 | 2.85e-56 | 207 |
MS.gene52521.t1 | AT4G15090 | 24.114 | 734 | 448 | 21 | 66 | 770 | 66 | 719 | 5.98e-47 | 180 |
MS.gene52521.t1 | AT4G15090 | 24.114 | 734 | 448 | 21 | 66 | 770 | 66 | 719 | 5.98e-47 | 180 |
MS.gene52521.t1 | AT4G15090 | 24.114 | 734 | 448 | 21 | 66 | 770 | 66 | 719 | 5.98e-47 | 180 |
MS.gene52521.t1 | AT4G15090 | 24.114 | 734 | 448 | 21 | 66 | 770 | 66 | 719 | 5.98e-47 | 180 |
MS.gene52521.t1 | AT4G15090 | 24.114 | 734 | 448 | 21 | 66 | 770 | 66 | 719 | 5.98e-47 | 180 |
MS.gene52521.t1 | AT3G06250 | 23.676 | 642 | 352 | 18 | 39 | 658 | 178 | 703 | 1.58e-42 | 166 |
MS.gene52521.t1 | AT3G06250 | 23.676 | 642 | 352 | 18 | 39 | 658 | 178 | 703 | 1.58e-42 | 166 |
MS.gene52521.t1 | AT3G06250 | 23.676 | 642 | 352 | 18 | 39 | 658 | 178 | 703 | 1.58e-42 | 166 |
MS.gene52521.t1 | AT3G22170 | 22.969 | 640 | 377 | 17 | 48 | 659 | 67 | 618 | 5.22e-41 | 162 |
MS.gene52521.t1 | AT3G22170 | 22.969 | 640 | 377 | 17 | 48 | 659 | 67 | 618 | 5.22e-41 | 162 |
MS.gene52521.t1 | AT1G76320 | 23.748 | 619 | 361 | 18 | 66 | 659 | 12 | 544 | 1.40e-39 | 156 |
MS.gene52521.t1 | AT1G76320 | 23.748 | 619 | 361 | 18 | 66 | 659 | 12 | 544 | 1.44e-39 | 157 |
MS.gene52521.t1 | AT1G76320 | 23.748 | 619 | 361 | 18 | 66 | 659 | 12 | 544 | 1.44e-39 | 157 |
MS.gene52521.t1 | AT1G76320 | 23.748 | 619 | 361 | 18 | 66 | 659 | 12 | 544 | 2.11e-39 | 156 |
MS.gene52521.t1 | AT2G27110 | 23.679 | 549 | 346 | 13 | 229 | 758 | 36 | 530 | 9.10e-39 | 154 |
MS.gene52521.t1 | AT2G27110 | 23.679 | 549 | 346 | 13 | 229 | 758 | 181 | 675 | 1.30e-38 | 154 |
MS.gene52521.t1 | AT2G27110 | 23.679 | 549 | 346 | 13 | 229 | 758 | 181 | 675 | 1.30e-38 | 154 |
MS.gene52521.t1 | AT5G18960 | 22.910 | 646 | 359 | 19 | 37 | 658 | 197 | 727 | 5.25e-38 | 152 |
MS.gene52521.t1 | AT5G18960 | 22.910 | 646 | 359 | 19 | 37 | 658 | 197 | 727 | 5.25e-38 | 152 |
MS.gene52521.t1 | AT1G10240 | 24.242 | 627 | 356 | 24 | 65 | 656 | 62 | 604 | 1.25e-35 | 144 |
MS.gene52521.t1 | AT1G10240 | 24.242 | 627 | 356 | 24 | 65 | 656 | 62 | 604 | 1.25e-35 | 144 |
MS.gene52521.t1 | AT5G28530 | 22.835 | 635 | 382 | 19 | 56 | 657 | 60 | 619 | 2.04e-32 | 134 |
MS.gene52521.t1 | AT1G80010 | 23.705 | 637 | 376 | 21 | 57 | 659 | 101 | 661 | 2.72e-32 | 134 |
MS.gene52521.t1 | AT4G38170 | 23.256 | 430 | 255 | 12 | 251 | 659 | 24 | 399 | 7.92e-32 | 131 |
MS.gene52521.t1 | AT5G28530 | 22.677 | 635 | 379 | 20 | 56 | 657 | 60 | 615 | 1.60e-31 | 131 |
MS.gene52521.t1 | AT5G28530 | 22.677 | 635 | 379 | 20 | 56 | 657 | 60 | 615 | 1.60e-31 | 131 |
MS.gene52521.t1 | AT2G32250 | 22.252 | 737 | 422 | 24 | 41 | 752 | 30 | 640 | 1.16e-29 | 126 |
MS.gene52521.t1 | AT2G32250 | 22.252 | 737 | 422 | 24 | 41 | 752 | 30 | 640 | 1.47e-29 | 126 |
MS.gene52521.t1 | AT2G32250 | 22.252 | 737 | 422 | 24 | 41 | 752 | 30 | 640 | 1.47e-29 | 126 |
MS.gene52521.t1 | AT2G32250 | 22.252 | 737 | 422 | 24 | 41 | 752 | 30 | 640 | 1.49e-29 | 126 |
MS.gene52521.t1 | AT2G32250 | 22.252 | 737 | 422 | 24 | 41 | 752 | 30 | 640 | 1.49e-29 | 126 |
MS.gene52521.t1 | AT2G32250 | 22.252 | 737 | 422 | 24 | 41 | 752 | 30 | 640 | 1.49e-29 | 126 |
MS.gene52521.t1 | AT2G32250 | 22.191 | 712 | 405 | 23 | 66 | 752 | 12 | 599 | 1.78e-29 | 125 |
MS.gene52521.t1 | AT2G32250 | 22.191 | 712 | 405 | 23 | 66 | 752 | 12 | 599 | 1.92e-29 | 125 |
MS.gene52521.t1 | AT5G28530 | 22.003 | 609 | 356 | 18 | 56 | 657 | 60 | 556 | 5.80e-26 | 114 |
MS.gene52521.t1 | AT1G52520 | 21.865 | 622 | 393 | 18 | 57 | 659 | 91 | 638 | 1.07e-25 | 113 |
MS.gene52521.t1 | AT5G28530 | 21.839 | 609 | 353 | 19 | 56 | 657 | 60 | 552 | 4.28e-25 | 111 |
MS.gene52521.t1 | AT4G19990 | 23.282 | 451 | 270 | 14 | 57 | 482 | 27 | 426 | 3.01e-20 | 96.7 |
MS.gene52521.t1 | AT4G19990 | 35.052 | 97 | 53 | 2 | 590 | 686 | 497 | 583 | 8.49e-11 | 66.2 |
MS.gene52521.t1 | AT4G19990 | 23.282 | 451 | 270 | 14 | 57 | 482 | 27 | 426 | 3.01e-20 | 96.7 |
MS.gene52521.t1 | AT4G19990 | 35.052 | 97 | 53 | 2 | 590 | 686 | 497 | 583 | 8.49e-11 | 66.2 |
MS.gene52521.t1 | AT4G19990 | 23.060 | 451 | 271 | 13 | 57 | 482 | 41 | 440 | 3.18e-20 | 96.3 |
MS.gene52521.t1 | AT4G19990 | 35.052 | 97 | 53 | 2 | 590 | 686 | 511 | 597 | 8.88e-11 | 66.2 |
MS.gene52521.t1 | AT4G19990 | 23.282 | 451 | 270 | 14 | 57 | 482 | 27 | 426 | 3.28e-20 | 96.3 |
MS.gene52521.t1 | AT4G19990 | 35.052 | 97 | 53 | 2 | 590 | 686 | 497 | 583 | 8.78e-11 | 66.2 |
MS.gene52521.t1 | AT4G19990 | 23.282 | 451 | 270 | 14 | 57 | 482 | 27 | 426 | 3.54e-20 | 96.3 |
MS.gene52521.t1 | AT4G19990 | 35.052 | 97 | 53 | 2 | 590 | 686 | 497 | 583 | 8.55e-11 | 66.2 |
MS.gene52521.t1 | AT4G19990 | 23.282 | 451 | 270 | 14 | 57 | 482 | 27 | 426 | 3.54e-20 | 96.3 |
MS.gene52521.t1 | AT4G19990 | 35.052 | 97 | 53 | 2 | 590 | 686 | 497 | 583 | 8.55e-11 | 66.2 |
MS.gene52521.t1 | AT4G19990 | 26.493 | 268 | 173 | 6 | 235 | 482 | 106 | 369 | 1.06e-19 | 94.7 |
MS.gene52521.t1 | AT4G19990 | 35.052 | 97 | 53 | 2 | 590 | 686 | 440 | 526 | 8.55e-11 | 65.9 |
Find 111 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTCGCTTCTTTGACTTAAT+TGG | 0.149305 | 7.2:+62726914 | None:intergenic |
TAAATTTCAGCTGCCTTTAT+TGG | 0.156227 | 7.2:-62728324 | MS.gene52521:intron |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 7.2:-62727776 | MS.gene52521:CDS |
AATCGTCTGTGGTTTCTTAT+TGG | 0.195298 | 7.2:+62728197 | None:intergenic |
TTCTTTGACTTAATTGGATT+TGG | 0.266522 | 7.2:+62726920 | None:intergenic |
GCCTTCCAATGTTGATGTTT+TGG | 0.271278 | 7.2:-62727485 | MS.gene52521:CDS |
TCTGCTGTTGGCCTGTTGTT+AGG | 0.299104 | 7.2:+62729414 | None:intergenic |
CGATCATGATCTTCAAAACT+TGG | 0.305304 | 7.2:+62727436 | None:intergenic |
TTACTTCTCGAAATGATCTA+AGG | 0.311482 | 7.2:+62729223 | None:intergenic |
GCATACGATTTACGTAAGTT+TGG | 0.320234 | 7.2:+62727920 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 7.2:+62728857 | None:intergenic |
TTGAGGATCTTAGAGTTCTT+AGG | 0.344028 | 7.2:-62727316 | MS.gene52521:CDS |
ATGATTGTCAAAACCAATAA+AGG | 0.372830 | 7.2:+62728311 | None:intergenic |
CTCGACGGTGTTCTTGAAGC+TGG | 0.383392 | 7.2:-62727076 | MS.gene52521:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 7.2:-62728850 | MS.gene52521:intron |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 7.2:-62728858 | MS.gene52521:CDS |
GAGAACGTCTTATGAAGTTA+TGG | 0.394356 | 7.2:-62729148 | MS.gene52521:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 7.2:+62726938 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 7.2:-62727602 | MS.gene52521:CDS |
TCATGCTGAGTTGGACTTCA+AGG | 0.402098 | 7.2:-62727734 | MS.gene52521:CDS |
GAAGGCCTACCTCAGACTTT+AGG | 0.402909 | 7.2:-62727951 | MS.gene52521:CDS |
CATGTCGTATGTTTGAGAAC+AGG | 0.415108 | 7.2:-62727360 | MS.gene52521:CDS |
AAAACACCTGGAAAACTATT+CGG | 0.428349 | 7.2:+62728138 | None:intergenic |
GAAGTTATGGGTCAAGGAGT+TGG | 0.428685 | 7.2:-62729135 | MS.gene52521:CDS |
GCTGTTGGTGAAACATCTGC+TGG | 0.428855 | 7.2:-62726977 | MS.gene52521:CDS |
ATATCAACTTCATCTGATAG+TGG | 0.429903 | 7.2:-62729750 | MS.gene52521:CDS |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 7.2:-62729210 | MS.gene52521:CDS |
GAGGAGTTGCTTCTTTCTAA+AGG | 0.437852 | 7.2:-62727043 | MS.gene52521:CDS |
GACCGCATCAGCTGATTGTT+GGG | 0.445552 | 7.2:+62727682 | None:intergenic |
TCCATGATTCTTTATTGCTA+GGG | 0.446439 | 7.2:+62729625 | None:intergenic |
TTCTTTGAACTTTGGTGCGG+TGG | 0.447203 | 7.2:+62726946 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 7.2:-62729345 | MS.gene52521:CDS |
TTCCATGATTCTTTATTGCT+AGG | 0.447614 | 7.2:+62729624 | None:intergenic |
TATGCATTGGTCTTCAGCTT+GGG | 0.450920 | 7.2:-62727902 | MS.gene52521:CDS |
GTCTTTAGTGCCAACATTGA+CGG | 0.451189 | 7.2:+62727192 | None:intergenic |
ATGTGTATAAGATATATAGA+TGG | 0.452819 | 7.2:-62729293 | MS.gene52521:CDS |
CATTCTTTGAAGACAATACC+TGG | 0.453034 | 7.2:-62727277 | MS.gene52521:CDS |
TTCAAATGTAGATGATGAAT+CGG | 0.455813 | 7.2:-62728019 | MS.gene52521:CDS |
CTTGCTTTGCATTTATTCAC+AGG | 0.460007 | 7.2:-62727636 | MS.gene52521:CDS |
GCTCTTATAAATTCTAAAGC+TGG | 0.462891 | 7.2:-62729180 | MS.gene52521:CDS |
TCAAAACATGTCGACATAAG+AGG | 0.465065 | 7.2:+62727335 | None:intergenic |
AGAACGTCTTATGAAGTTAT+GGG | 0.466325 | 7.2:-62729147 | MS.gene52521:CDS |
GTTTACTTAATCCTAACAAC+AGG | 0.470860 | 7.2:-62729425 | MS.gene52521:CDS |
CGCTTTAAAACATATTGTCC+AGG | 0.471916 | 7.2:+62727259 | None:intergenic |
CTAAGGTAACGCGAATGCTC+TGG | 0.476897 | 7.2:+62729240 | None:intergenic |
ATCATGATCGATTTGATGAA+AGG | 0.476999 | 7.2:-62727423 | MS.gene52521:CDS |
GTATGCATTGGTCTTCAGCT+TGG | 0.479582 | 7.2:-62727903 | MS.gene52521:CDS |
GGACCGCATCAGCTGATTGT+TGG | 0.480704 | 7.2:+62727681 | None:intergenic |
TTTAAGTCTGAAAACCGAAA+AGG | 0.483010 | 7.2:+62729096 | None:intergenic |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 7.2:+62727600 | None:intergenic |
CTTTCTAAAGGTATTCGTAC+AGG | 0.486879 | 7.2:-62727031 | MS.gene52521:CDS |
GATCATGATCTTCAAAACTT+GGG | 0.487945 | 7.2:+62727437 | None:intergenic |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 7.2:-62727586 | MS.gene52521:CDS |
TTGAAGACTTAGATGGCGTC+GGG | 0.493598 | 7.2:+62727008 | None:intergenic |
CTGTTGGTGAAACATCTGCT+GGG | 0.493682 | 7.2:-62726976 | MS.gene52521:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 7.2:-62727762 | MS.gene52521:CDS |
TATGATGATGCTGATAATGA+TGG | 0.494079 | 7.2:-62727508 | MS.gene52521:CDS |
CGTTATGTTTGTAACAAACA+AGG | 0.494754 | 7.2:-62729462 | MS.gene52521:CDS |
CCCCTAGCAATAAAGAATCA+TGG | 0.497001 | 7.2:-62729626 | MS.gene52521:CDS |
TCTTTGAACTTTGGTGCGGT+GGG | 0.503874 | 7.2:+62726947 | None:intergenic |
CATAATAGTATTTGAAGGAA+AGG | 0.504619 | 7.2:+62727605 | None:intergenic |
TTACAACCAACCCTTTCCTC+AGG | 0.505082 | 7.2:+62729351 | None:intergenic |
AGCTGGAATATATTTGAAGC+TGG | 0.507410 | 7.2:-62729328 | MS.gene52521:CDS |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 7.2:-62727743 | MS.gene52521:CDS |
ACAAAACAAGAAATCTGATA+AGG | 0.511435 | 7.2:-62729496 | MS.gene52521:CDS |
TAACAAACAAGGTTTCAAGA+AGG | 0.511682 | 7.2:-62729451 | MS.gene52521:CDS |
GATCTTCAAAACTTGGGGAA+AGG | 0.512098 | 7.2:+62727443 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 7.2:+62727794 | None:intergenic |
GGTAATTATGCATATAACAC+TGG | 0.523547 | 7.2:-62729558 | MS.gene52521:CDS |
TAAGATATATAGATGGGATG+TGG | 0.528498 | 7.2:-62729286 | MS.gene52521:CDS |
AAACCACAGACGATTTATAC+AGG | 0.531016 | 7.2:-62728189 | MS.gene52521:CDS |
AACACAATAACGCACTAGCC+TGG | 0.531711 | 7.2:+62728166 | None:intergenic |
TGGGCTTTGTTCATGGCACA+TGG | 0.532868 | 7.2:-62728112 | MS.gene52521:CDS |
CCATGATTCTTTATTGCTAG+GGG | 0.539183 | 7.2:+62729626 | None:intergenic |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 7.2:+62727799 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 7.2:-62727585 | MS.gene52521:CDS |
TGCATCCAAAACATCAACAT+TGG | 0.544202 | 7.2:+62727480 | None:intergenic |
GATAGTGGACATCTTAGTGT+TGG | 0.548322 | 7.2:-62729735 | MS.gene52521:CDS |
AACAAACAAGGTTTCAAGAA+GGG | 0.554561 | 7.2:-62729450 | MS.gene52521:CDS |
ATGTCGTATGTTTGAGAACA+GGG | 0.560861 | 7.2:-62727359 | MS.gene52521:CDS |
CTGAAATCGACCGTCAATGT+TGG | 0.564487 | 7.2:-62727202 | MS.gene52521:CDS |
GGCCTACCTCAGACTTTAGG+TGG | 0.565384 | 7.2:-62727948 | MS.gene52521:CDS |
TCTTCAAAAGTAGCTGCTGT+TGG | 0.568528 | 7.2:-62726992 | MS.gene52521:CDS |
TCCAAAACATCAACATTGGA+AGG | 0.569301 | 7.2:+62727484 | None:intergenic |
TGAATAAATGCAAAGCAAGA+AGG | 0.570463 | 7.2:+62727640 | None:intergenic |
GAATGCTCTGGTTTATGTAA+TGG | 0.573489 | 7.2:+62729252 | None:intergenic |
TTTGAAGACTTAGATGGCGT+CGG | 0.575863 | 7.2:+62727007 | None:intergenic |
CTTACGTAAATCGTATGCAT+TGG | 0.576224 | 7.2:-62727915 | MS.gene52521:CDS |
ATCATGATCTTCAAAACTTG+GGG | 0.577988 | 7.2:+62727438 | None:intergenic |
GTTATGGGTCAAGGAGTTGG+AGG | 0.578191 | 7.2:-62729132 | MS.gene52521:CDS |
TCTTATGAAGTTATGGGTCA+AGG | 0.580120 | 7.2:-62729141 | MS.gene52521:CDS |
AGGATCTTAGAGTTCTTAGG+TGG | 0.586733 | 7.2:-62727313 | MS.gene52521:CDS |
TGTGTATAAGATATATAGAT+GGG | 0.601002 | 7.2:-62729292 | MS.gene52521:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 7.2:+62727168 | None:intergenic |
ACCAGTGGACTGTCTGCTGT+TGG | 0.602965 | 7.2:+62729402 | None:intergenic |
TCACTGATTCATGCTGAGAG+TGG | 0.606950 | 7.2:-62729705 | MS.gene52521:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 7.2:-62727599 | MS.gene52521:CDS |
GCCAACAGCAGACAGTCCAC+TGG | 0.611268 | 7.2:-62729403 | MS.gene52521:CDS |
ATCCCAACAATCAGCTGATG+CGG | 0.622514 | 7.2:-62727684 | MS.gene52521:CDS |
ACAGACGATTTATACAGGCC+AGG | 0.624512 | 7.2:-62728184 | MS.gene52521:CDS |
TTCACAAACTCAATAACCAG+TGG | 0.633415 | 7.2:+62729387 | None:intergenic |
TGTTGGTGAAACATCTGCTG+GGG | 0.639082 | 7.2:-62726975 | MS.gene52521:CDS |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 7.2:-62727761 | MS.gene52521:CDS |
TGGCCTGTATAAATCGTCTG+TGG | 0.652720 | 7.2:+62728186 | None:intergenic |
GATTTCAGCTTATCGACAGA+CGG | 0.652942 | 7.2:+62727217 | None:intergenic |
GACAAGCCACCTAAAGTCTG+AGG | 0.653221 | 7.2:+62727942 | None:intergenic |
ATGATGATGCTGATAATGAT+GGG | 0.657050 | 7.2:-62727507 | MS.gene52521:CDS |
TCTTTCTTTGAACTTTGGTG+CGG | 0.659854 | 7.2:+62726943 | None:intergenic |
TGTCGTATGTTTGAGAACAG+GGG | 0.682825 | 7.2:-62727358 | MS.gene52521:CDS |
AGCCACCTAAAGTCTGAGGT+AGG | 0.684957 | 7.2:+62727946 | None:intergenic |
AGGTGTGTACTTGTTTACAA+CGG | 0.690351 | 7.2:+62727660 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTATGAGTTAAATAATT+TGG | - | chr7.2:62728611-62728630 | MS.gene52521:intron | 10.0% |
!! | ACATACTTATTAGAATACTT+AGG | - | chr7.2:62728095-62728114 | MS.gene52521:CDS | 20.0% |
!! | ATGTGTATAAGATATATAGA+TGG | - | chr7.2:62727361-62727380 | MS.gene52521:CDS | 20.0% |
!! | TAACTAGATTATTCTCTATT+CGG | - | chr7.2:62727747-62727766 | MS.gene52521:CDS | 20.0% |
!! | TGAATATCATAGTAAAAAGA+TGG | + | chr7.2:62727675-62727694 | None:intergenic | 20.0% |
!! | TGTGTATAAGATATATAGAT+GGG | - | chr7.2:62727362-62727381 | MS.gene52521:CDS | 20.0% |
!!! | AAAGAGATTGAAGATTTTTA+TGG | - | chr7.2:62727075-62727094 | MS.gene52521:CDS | 20.0% |
!!! | AATCGGATTTTAACTATAAT+TGG | - | chr7.2:62728652-62728671 | MS.gene52521:intron | 20.0% |
!!! | ATCGGATTTTAACTATAATT+GGG | - | chr7.2:62728653-62728672 | MS.gene52521:intron | 20.0% |
!!! | ATGATGATAAATTGTTTTGA+TGG | - | chr7.2:62728681-62728700 | MS.gene52521:intron | 20.0% |
!!! | TTCTTATAATTTGTGATTAC+AGG | - | chr7.2:62728158-62728177 | MS.gene52521:CDS | 20.0% |
! | ACAAAACAAGAAATCTGATA+AGG | - | chr7.2:62727158-62727177 | MS.gene52521:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | - | chr7.2:62727796-62727815 | MS.gene52521:CDS | 25.0% |
! | ATGATTGTCAAAACCAATAA+AGG | + | chr7.2:62728346-62728365 | None:intergenic | 25.0% |
! | CAAACTTAAATGATGTTGAT+TGG | - | chr7.2:62728019-62728038 | MS.gene52521:CDS | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | + | chr7.2:62729052-62729071 | None:intergenic | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | - | chr7.2:62728878-62728897 | MS.gene52521:intron | 25.0% |
! | GAAAATGCAAAGAAAAATCT+TGG | - | chr7.2:62728567-62728586 | MS.gene52521:intron | 25.0% |
! | TCTTACTTATTTGAACTACA+GGG | - | chr7.2:62727941-62727960 | MS.gene52521:CDS | 25.0% |
! | TGTAAAAAACACTAACCTAA+TGG | + | chr7.2:62727822-62727841 | None:intergenic | 25.0% |
! | TTCAAATGTAGATGATGAAT+CGG | - | chr7.2:62728635-62728654 | MS.gene52521:intron | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | - | chr7.2:62729052-62729071 | MS.gene52521:CDS | 25.0% |
! | TTCTTACTTATTTGAACTAC+AGG | - | chr7.2:62727940-62727959 | MS.gene52521:CDS | 25.0% |
!! | AACTTTGAAAAACTTCTCAA+AGG | + | chr7.2:62729099-62729118 | None:intergenic | 25.0% |
!! | ATAACACTGGATTTTCTATT+AGG | - | chr7.2:62727109-62727128 | MS.gene52521:CDS | 25.0% |
!! | CAAAGTTTTCACAATTGATA+AGG | - | chr7.2:62729112-62729131 | MS.gene52521:CDS | 25.0% |
!! | TCATCTAAAAATTTTCTCGA+CGG | - | chr7.2:62729563-62729582 | MS.gene52521:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATA+TGG | - | chr7.2:62728301-62728320 | MS.gene52521:CDS | 25.0% |
!! | TTACTTTCATTAAGTTGTTC+TGG | - | chr7.2:62727865-62727884 | MS.gene52521:CDS | 25.0% |
!! | TTCTTTGACTTAATTGGATT+TGG | + | chr7.2:62729737-62729756 | None:intergenic | 25.0% |
!!! | AAGACATAGCTAGTATTTTT+TGG | - | chr7.2:62727709-62727728 | MS.gene52521:CDS | 25.0% |
!!! | AGAAAATTTTTAGATGACTC+CGG | + | chr7.2:62729560-62729579 | None:intergenic | 25.0% |
!!! | ATTTATATTTTGAACTGCCT+AGG | - | chr7.2:62728043-62728062 | MS.gene52521:CDS | 25.0% |
!!! | TGATAAATTGTTTTGATGGA+AGG | - | chr7.2:62728685-62728704 | MS.gene52521:intron | 25.0% |
AAAACACCTGGAAAACTATT+CGG | + | chr7.2:62728519-62728538 | None:intergenic | 30.0% | |
AACAAACAAGGTTTCAAGAA+GGG | - | chr7.2:62727204-62727223 | MS.gene52521:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | - | chr7.2:62727804-62727823 | MS.gene52521:CDS | 30.0% | |
AATTCATCAAAAAGAGATGG+TGG | - | chr7.2:62727596-62727615 | MS.gene52521:CDS | 30.0% | |
AGAACGTCTTATGAAGTTAT+GGG | - | chr7.2:62727507-62727526 | MS.gene52521:CDS | 30.0% | |
ATATCAACTTCATCTGATAG+TGG | - | chr7.2:62726904-62726923 | MS.gene52521:CDS | 30.0% | |
ATCATGATCTTCAAAACTTG+GGG | + | chr7.2:62729219-62729238 | None:intergenic | 30.0% | |
CGTTATGTTTGTAACAAACA+AGG | - | chr7.2:62727192-62727211 | MS.gene52521:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | + | chr7.2:62729057-62729076 | None:intergenic | 30.0% | |
CTTACTTATTTGAACTACAG+GGG | - | chr7.2:62727942-62727961 | MS.gene52521:CDS | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | - | chr7.2:62729055-62729074 | MS.gene52521:CDS | 30.0% | |
GACAATTCATCAAAAAGAGA+TGG | - | chr7.2:62727593-62727612 | MS.gene52521:CDS | 30.0% | |
GATCATGATCTTCAAAACTT+GGG | + | chr7.2:62729220-62729239 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | + | chr7.2:62727800-62727819 | None:intergenic | 30.0% | |
GGTAATTATGCATATAACAC+TGG | - | chr7.2:62727096-62727115 | MS.gene52521:CDS | 30.0% | |
GTTTACTTAATCCTAACAAC+AGG | - | chr7.2:62727229-62727248 | MS.gene52521:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | + | chr7.2:62728863-62728882 | None:intergenic | 30.0% | |
TAAATTTCAGCTGCCTTTAT+TGG | - | chr7.2:62728330-62728349 | MS.gene52521:intron | 30.0% | |
TAACAAACAAGGTTTCAAGA+AGG | - | chr7.2:62727203-62727222 | MS.gene52521:CDS | 30.0% | |
TAAGAACTATAGTCATTCCT+AGG | + | chr7.2:62727926-62727945 | None:intergenic | 30.0% | |
TAAGATATATAGATGGGATG+TGG | - | chr7.2:62727368-62727387 | MS.gene52521:CDS | 30.0% | |
TAAGTTTGTCTCAAACCAAA+TGG | + | chr7.2:62728007-62728026 | None:intergenic | 30.0% | |
TCCATGATTCTTTATTGCTA+GGG | + | chr7.2:62727032-62727051 | None:intergenic | 30.0% | |
TGAATAAATGCAAAGCAAGA+AGG | + | chr7.2:62729017-62729036 | None:intergenic | 30.0% | |
TTACTTCTCGAAATGATCTA+AGG | + | chr7.2:62727434-62727453 | None:intergenic | 30.0% | |
TTCCATGATTCTTTATTGCT+AGG | + | chr7.2:62727033-62727052 | None:intergenic | 30.0% | |
TTTAAGTCTGAAAACCGAAA+AGG | + | chr7.2:62727561-62727580 | None:intergenic | 30.0% | |
! | ATGATGATGCTGATAATGAT+GGG | - | chr7.2:62729147-62729166 | MS.gene52521:CDS | 30.0% |
! | TATGATGATGCTGATAATGA+TGG | - | chr7.2:62729146-62729165 | MS.gene52521:CDS | 30.0% |
! | TTAACCATGCTGTTTGTTTA+GGG | - | chr7.2:62727966-62727985 | MS.gene52521:CDS | 30.0% |
! | TTTAACCATGCTGTTTGTTT+AGG | - | chr7.2:62727965-62727984 | MS.gene52521:CDS | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr7.2:62729719-62729738 | None:intergenic | 30.0% |
!! | ATCATGATCGATTTGATGAA+AGG | - | chr7.2:62729231-62729250 | MS.gene52521:CDS | 30.0% |
!! | GCTCTTATAAATTCTAAAGC+TGG | - | chr7.2:62727474-62727493 | MS.gene52521:CDS | 30.0% |
!!! | GACAATATGTTTTAAAGCGT+TGG | - | chr7.2:62729399-62729418 | MS.gene52521:CDS | 30.0% |
!!! | TAGTGTTTTTTACATCTCTC+AGG | - | chr7.2:62727828-62727847 | MS.gene52521:CDS | 30.0% |
AAACCACAGACGATTTATAC+AGG | - | chr7.2:62728465-62728484 | MS.gene52521:intron | 35.0% | |
AAATCCCTAAACAAACAGCA+TGG | + | chr7.2:62727973-62727992 | None:intergenic | 35.0% | |
AATCGTCTGTGGTTTCTTAT+TGG | + | chr7.2:62728460-62728479 | None:intergenic | 35.0% | |
ACATTATGGTTCAGAGAATG+AGG | - | chr7.2:62728892-62728911 | MS.gene52521:intron | 35.0% | |
AGCAATGACTAATTAAGGGT+TGG | - | chr7.2:62728183-62728202 | MS.gene52521:CDS | 35.0% | |
AGGCTAGCAATGACTAATTA+AGG | - | chr7.2:62728178-62728197 | MS.gene52521:CDS | 35.0% | |
AGGTGTGTACTTGTTTACAA+CGG | + | chr7.2:62728997-62729016 | None:intergenic | 35.0% | |
AGTAAAAAGATGGTTTCGAG+AGG | + | chr7.2:62727665-62727684 | None:intergenic | 35.0% | |
ATGTCGTATGTTTGAGAACA+GGG | - | chr7.2:62729295-62729314 | MS.gene52521:CDS | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | - | chr7.2:62728893-62728912 | MS.gene52521:intron | 35.0% | |
CCATGATTCTTTATTGCTAG+GGG | + | chr7.2:62727031-62727050 | None:intergenic | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | - | chr7.2:62727444-62727463 | MS.gene52521:CDS | 35.0% | |
CGATCATGATCTTCAAAACT+TGG | + | chr7.2:62729221-62729240 | None:intergenic | 35.0% | |
CTTACGTAAATCGTATGCAT+TGG | - | chr7.2:62728739-62728758 | MS.gene52521:intron | 35.0% | |
CTTGCTTTGCATTTATTCAC+AGG | - | chr7.2:62729018-62729037 | MS.gene52521:CDS | 35.0% | |
GAAAGAAAAACCTGAGGAAA+GGG | - | chr7.2:62727293-62727312 | MS.gene52521:CDS | 35.0% | |
GAAAGTGAAAGAAAAACCTG+AGG | - | chr7.2:62727287-62727306 | MS.gene52521:CDS | 35.0% | |
GAGAACGTCTTATGAAGTTA+TGG | - | chr7.2:62727506-62727525 | MS.gene52521:CDS | 35.0% | |
GCATACGATTTACGTAAGTT+TGG | + | chr7.2:62728737-62728756 | None:intergenic | 35.0% | |
GGCTAGCAATGACTAATTAA+GGG | - | chr7.2:62728179-62728198 | MS.gene52521:CDS | 35.0% | |
GTAAAAAGATGGTTTCGAGA+GGG | + | chr7.2:62727664-62727683 | None:intergenic | 35.0% | |
TCAAAACATGTCGACATAAG+AGG | + | chr7.2:62729322-62729341 | None:intergenic | 35.0% | |
TCACACAAGATAAAATGCCT+AGG | + | chr7.2:62728063-62728082 | None:intergenic | 35.0% | |
TCCAAAACATCAACATTGGA+AGG | + | chr7.2:62729173-62729192 | None:intergenic | 35.0% | |
TCTTATGAAGTTATGGGTCA+AGG | - | chr7.2:62727513-62727532 | MS.gene52521:CDS | 35.0% | |
TCTTTCTTTGAACTTTGGTG+CGG | + | chr7.2:62729714-62729733 | None:intergenic | 35.0% | |
TGAAAGAAAAACCTGAGGAA+AGG | - | chr7.2:62727292-62727311 | MS.gene52521:CDS | 35.0% | |
TGACTAATTAAGGGTTGGAT+TGG | - | chr7.2:62728188-62728207 | MS.gene52521:CDS | 35.0% | |
TGCATCCAAAACATCAACAT+TGG | + | chr7.2:62729177-62729196 | None:intergenic | 35.0% | |
TGTTCTTGAAGCTGGAAAAA+AGG | - | chr7.2:62729586-62729605 | MS.gene52521:CDS | 35.0% | |
TTCACAAACTCAATAACCAG+TGG | + | chr7.2:62727270-62727289 | None:intergenic | 35.0% | |
TTGAGGATCTTAGAGTTCTT+AGG | - | chr7.2:62729338-62729357 | MS.gene52521:CDS | 35.0% | |
! | AGCTGGAATATATTTGAAGC+TGG | - | chr7.2:62727326-62727345 | MS.gene52521:CDS | 35.0% |
! | AGTCGCTTCTTTGACTTAAT+TGG | + | chr7.2:62729743-62729762 | None:intergenic | 35.0% |
! | AGTTTTCCAGGTGTTTTTCA+TGG | - | chr7.2:62728522-62728541 | MS.gene52521:intron | 35.0% |
! | ATTTAGTTTACGCATTGCTG+AGG | - | chr7.2:62728129-62728148 | MS.gene52521:CDS | 35.0% |
! | CATTCTTTGAAGACAATACC+TGG | - | chr7.2:62729377-62729396 | MS.gene52521:CDS | 35.0% |
! | GAATGCTCTGGTTTATGTAA+TGG | + | chr7.2:62727405-62727424 | None:intergenic | 35.0% |
! | GTTTTCCAGGTGTTTTTCAT+GGG | - | chr7.2:62728523-62728542 | MS.gene52521:intron | 35.0% |
! | TACACGTTTTTATGCAGATC+CGG | - | chr7.2:62729538-62729557 | MS.gene52521:CDS | 35.0% |
! | TCAATTCCGAATAGTTTTCC+AGG | - | chr7.2:62728510-62728529 | MS.gene52521:intron | 35.0% |
! | TCTTATGTCGACATGTTTTG+AGG | - | chr7.2:62729321-62729340 | MS.gene52521:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr7.2:62728822-62728841 | MS.gene52521:intron | 35.0% |
!! | CGCTTTAAAACATATTGTCC+AGG | + | chr7.2:62729398-62729417 | None:intergenic | 35.0% |
!! | CTTTCTAAAGGTATTCGTAC+AGG | - | chr7.2:62729623-62729642 | MS.gene52521:CDS | 35.0% |
!!! | GCTACTTTTGAAGACTTAGA+TGG | + | chr7.2:62729656-62729675 | None:intergenic | 35.0% |
!!! | GCTAGTATTTTTTGGTCAGA+TGG | - | chr7.2:62727717-62727736 | MS.gene52521:CDS | 35.0% |
!!! | TTTTTCATGGGCTTTGTTCA+TGG | - | chr7.2:62728535-62728554 | MS.gene52521:intron | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | + | chr7.2:62728858-62728877 | None:intergenic | 40.0% | |
AGGATCTTAGAGTTCTTAGG+TGG | - | chr7.2:62729341-62729360 | MS.gene52521:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | - | chr7.2:62729069-62729088 | MS.gene52521:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+AGG | - | chr7.2:62729294-62729313 | MS.gene52521:CDS | 40.0% | |
CCCCTAGCAATAAAGAATCA+TGG | - | chr7.2:62727028-62727047 | MS.gene52521:CDS | 40.0% | |
GAGGAGTTGCTTCTTTCTAA+AGG | - | chr7.2:62729611-62729630 | MS.gene52521:CDS | 40.0% | |
GATCTTCAAAACTTGGGGAA+AGG | + | chr7.2:62729214-62729233 | None:intergenic | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | + | chr7.2:62729440-62729459 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTGA+CGG | + | chr7.2:62729465-62729484 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | - | chr7.2:62729068-62729087 | MS.gene52521:CDS | 40.0% | |
TCTTCAAAAGTAGCTGCTGT+TGG | - | chr7.2:62729662-62729681 | MS.gene52521:CDS | 40.0% | |
TGTCGTATGTTTGAGAACAG+GGG | - | chr7.2:62729296-62729315 | MS.gene52521:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | + | chr7.2:62729489-62729508 | None:intergenic | 40.0% | |
TTTGAAGACTTAGATGGCGT+CGG | + | chr7.2:62729650-62729669 | None:intergenic | 40.0% | |
! | ATTTTCTCGCTTCTGCCATT+TGG | - | chr7.2:62727989-62728008 | MS.gene52521:CDS | 40.0% |
! | CAGTACATTTTGAACTGCCT+AGG | - | chr7.2:62727906-62727925 | MS.gene52521:CDS | 40.0% |
! | CATCAAAAAGAGATGGTGGT+TGG | - | chr7.2:62727600-62727619 | MS.gene52521:CDS | 40.0% |
! | GCACAGAGAATCTTCCTTTT+CGG | - | chr7.2:62727544-62727563 | MS.gene52521:CDS | 40.0% |
! | GCCTTCCAATGTTGATGTTT+TGG | - | chr7.2:62729169-62729188 | MS.gene52521:CDS | 40.0% |
! | GTCAAGTCACATTTTACAGC+TGG | - | chr7.2:62728774-62728793 | MS.gene52521:intron | 40.0% |
!! | GATAGTGGACATCTTAGTGT+TGG | - | chr7.2:62726919-62726938 | MS.gene52521:CDS | 40.0% |
!! | TATGCATTGGTCTTCAGCTT+GGG | - | chr7.2:62728752-62728771 | MS.gene52521:intron | 40.0% |
!!! | AGACAGCAGCTACTTTTGAT+TGG | - | chr7.2:62728406-62728425 | MS.gene52521:intron | 40.0% |
!!! | CATCGCAAGAGTGTTTTGTT+TGG | - | chr7.2:62728363-62728382 | MS.gene52521:intron | 40.0% |
AACACAATAACGCACTAGCC+TGG | + | chr7.2:62728491-62728510 | None:intergenic | 45.0% | |
ACAGACGATTTATACAGGCC+AGG | - | chr7.2:62728470-62728489 | MS.gene52521:intron | 45.0% | |
ATCCCAACAATCAGCTGATG+CGG | - | chr7.2:62728970-62728989 | MS.gene52521:CDS | 45.0% | |
CAAAGCCCATGAAAAACACC+TGG | + | chr7.2:62728531-62728550 | None:intergenic | 45.0% | |
CTGAAATCGACCGTCAATGT+TGG | - | chr7.2:62729452-62729471 | MS.gene52521:CDS | 45.0% | |
GAAAAACCTGAGGAAAGGGT+TGG | - | chr7.2:62727297-62727316 | MS.gene52521:CDS | 45.0% | |
GAAGTTATGGGTCAAGGAGT+TGG | - | chr7.2:62727519-62727538 | MS.gene52521:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | - | chr7.2:62728911-62728930 | MS.gene52521:intron | 45.0% | |
TGAAGCTGGAAAAAAGGCAG+AGG | - | chr7.2:62729592-62729611 | MS.gene52521:CDS | 45.0% | |
TGGCCTGTATAAATCGTCTG+TGG | + | chr7.2:62728471-62728490 | None:intergenic | 45.0% | |
TTACAACCAACCCTTTCCTC+AGG | + | chr7.2:62727306-62727325 | None:intergenic | 45.0% | |
TTGAAGACTTAGATGGCGTC+GGG | + | chr7.2:62729649-62729668 | None:intergenic | 45.0% | |
! | CTGTTGGTGAAACATCTGCT+GGG | - | chr7.2:62729678-62729697 | MS.gene52521:CDS | 45.0% |
! | TCATGCTGAGTTGGACTTCA+AGG | - | chr7.2:62728920-62728939 | MS.gene52521:intron | 45.0% |
! | TCTTTGAACTTTGGTGCGGT+GGG | + | chr7.2:62729710-62729729 | None:intergenic | 45.0% |
! | TGTTGGTGAAACATCTGCTG+GGG | - | chr7.2:62729679-62729698 | MS.gene52521:CDS | 45.0% |
! | TTCTTTGAACTTTGGTGCGG+TGG | + | chr7.2:62729711-62729730 | None:intergenic | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr7.2:62727309-62727328 | MS.gene52521:CDS | 45.0% |
!! | GTATGCATTGGTCTTCAGCT+TGG | - | chr7.2:62728751-62728770 | MS.gene52521:intron | 45.0% |
!! | TCACTGATTCATGCTGAGAG+TGG | - | chr7.2:62726949-62726968 | MS.gene52521:CDS | 45.0% |
CTAAGGTAACGCGAATGCTC+TGG | + | chr7.2:62727417-62727436 | None:intergenic | 50.0% | |
GAAGGCCTACCTCAGACTTT+AGG | - | chr7.2:62728703-62728722 | MS.gene52521:intron | 50.0% | |
GACAAGCCACCTAAAGTCTG+AGG | + | chr7.2:62728715-62728734 | None:intergenic | 50.0% | |
GACCGCATCAGCTGATTGTT+GGG | + | chr7.2:62728975-62728994 | None:intergenic | 50.0% | |
GTTATGGGTCAAGGAGTTGG+AGG | - | chr7.2:62727522-62727541 | MS.gene52521:CDS | 50.0% | |
! | AGCCACCTAAAGTCTGAGGT+AGG | + | chr7.2:62728711-62728730 | None:intergenic | 50.0% |
! | GCTGTTGGTGAAACATCTGC+TGG | - | chr7.2:62729677-62729696 | MS.gene52521:CDS | 50.0% |
! | TCTGCTGTTGGCCTGTTGTT+AGG | + | chr7.2:62727243-62727262 | None:intergenic | 50.0% |
!! | TGGGCTTTGTTCATGGCACA+TGG | - | chr7.2:62728542-62728561 | MS.gene52521:intron | 50.0% |
CTCGACGGTGTTCTTGAAGC+TGG | - | chr7.2:62729578-62729597 | MS.gene52521:CDS | 55.0% | |
GGACCGCATCAGCTGATTGT+TGG | + | chr7.2:62728976-62728995 | None:intergenic | 55.0% | |
GGCCTACCTCAGACTTTAGG+TGG | - | chr7.2:62728706-62728725 | MS.gene52521:intron | 55.0% | |
!! | ACCAGTGGACTGTCTGCTGT+TGG | + | chr7.2:62727255-62727274 | None:intergenic | 55.0% |
GCCAACAGCAGACAGTCCAC+TGG | - | chr7.2:62727251-62727270 | MS.gene52521:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 62726895 | 62729781 | 62726895 | ID=MS.gene52521 |
chr7.2 | mRNA | 62726895 | 62729781 | 62726895 | ID=MS.gene52521.t1;Parent=MS.gene52521 |
chr7.2 | exon | 62728946 | 62729781 | 62728946 | ID=MS.gene52521.t1.exon1;Parent=MS.gene52521.t1 |
chr7.2 | CDS | 62728946 | 62729781 | 62728946 | ID=cds.MS.gene52521.t1;Parent=MS.gene52521.t1 |
chr7.2 | exon | 62728851 | 62728894 | 62728851 | ID=MS.gene52521.t1.exon2;Parent=MS.gene52521.t1 |
chr7.2 | CDS | 62728851 | 62728894 | 62728851 | ID=cds.MS.gene52521.t1;Parent=MS.gene52521.t1 |
chr7.2 | exon | 62726895 | 62728336 | 62726895 | ID=MS.gene52521.t1.exon3;Parent=MS.gene52521.t1 |
chr7.2 | CDS | 62726895 | 62728336 | 62726895 | ID=cds.MS.gene52521.t1;Parent=MS.gene52521.t1 |
Gene Sequence |
Protein sequence |