AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene53022

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53022.t1 MTR_7g006030 90.647 139 10 1 40 178 70 205 7.53e-86 270
MS.gene53022.t1 MTR_1g116210 89.683 126 13 0 42 167 149 274 5.34e-80 256
MS.gene53022.t1 MTR_1g007150 78.102 137 27 1 42 178 153 286 1.55e-73 239
MS.gene53022.t1 MTR_3g110240 76.642 137 29 1 42 178 150 283 4.39e-72 236
MS.gene53022.t1 MTR_7g085540 71.533 137 36 1 42 178 181 314 1.87e-68 226
MS.gene53022.t1 MTR_8g014050 70.896 134 36 1 42 175 164 294 3.08e-63 212
MS.gene53022.t1 MTR_2g041140 80.374 107 18 2 210 316 592 695 1.10e-34 134
MS.gene53022.t1 MTR_2g041140 81.132 53 10 0 156 208 450 502 9.70e-21 93.2
MS.gene53022.t1 MTR_3g049990 57.143 161 18 2 210 321 602 760 2.98e-32 127
MS.gene53022.t1 MTR_3g049990 47.967 123 53 4 156 268 460 581 6.39e-22 96.7
MS.gene53022.t1 MTR_7g097160 37.324 142 82 3 37 178 30 164 3.59e-22 96.7
MS.gene53022.t1 MTR_1g075870 38.028 142 81 3 37 178 31 165 4.57e-22 95.1
MS.gene53022.t1 MTR_1g075870 38.028 142 81 3 37 178 31 165 5.66e-22 96.3
MS.gene53022.t1 MTR_1g042280 39.496 119 67 2 60 178 52 165 7.82e-22 95.9
MS.gene53022.t1 MTR_1g042280 39.496 119 67 2 60 178 20 133 1.40e-21 93.2
MS.gene53022.t1 MTR_1g069720 37.324 142 82 3 37 178 30 164 1.57e-21 94.7
MS.gene53022.t1 MTR_1g019930 93.333 45 3 0 1 45 45 89 2.39e-21 92.8
MS.gene53022.t1 MTR_2g017680 93.333 45 3 0 1 45 41 85 2.60e-21 92.4
MS.gene53022.t1 MTR_8g018310 35.878 131 80 2 37 167 30 156 8.28e-21 92.8
MS.gene53022.t1 MTR_8g018310 35.878 131 80 2 37 167 30 156 1.17e-20 92.0
MS.gene53022.t1 MTR_6g087070 35.000 160 91 4 19 178 18 164 1.56e-20 91.7
MS.gene53022.t1 MTR_2g099670 35.211 142 85 3 37 178 30 164 2.88e-20 91.3
MS.gene53022.t1 MTR_4g126010 35.211 142 85 3 37 178 30 164 3.01e-20 91.3
MS.gene53022.t1 MTR_2g039930 35.766 137 81 3 42 178 35 164 6.72e-20 90.1
MS.gene53022.t1 MTR_0492s0030 37.008 127 76 2 42 168 35 157 2.77e-19 87.8
MS.gene53022.t1 MTR_0543s0020 37.008 127 76 2 42 168 35 157 2.77e-19 87.8
MS.gene53022.t1 MTR_8g102930 34.899 149 87 3 19 167 18 156 5.48e-19 87.4
MS.gene53022.t1 MTR_1g075870 38.739 111 63 2 68 178 3 108 1.48e-18 84.7
MS.gene53022.t1 MTR_1g004990 36.134 119 71 2 60 178 51 164 9.21e-18 83.6
MS.gene53022.t1 MTR_3g110180 34.821 112 71 1 60 171 51 160 9.59e-18 83.6
MS.gene53022.t1 MTR_3g110180 34.821 112 71 1 60 171 51 160 9.82e-18 83.6
MS.gene53022.t1 MTR_2g099670 36.792 106 62 2 73 178 12 112 7.11e-17 81.3
MS.gene53022.t1 MTR_1g116205 100.000 24 0 0 42 65 149 172 2.09e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53022.t1 AT3G13670 86.508 126 17 0 42 167 172 297 5.23e-78 252
MS.gene53022.t1 AT2G25760 78.832 137 26 1 42 178 143 276 9.98e-76 245
MS.gene53022.t1 AT2G25760 78.832 137 26 1 42 178 143 276 1.06e-75 245
MS.gene53022.t1 AT5G18190 77.778 126 28 0 42 167 164 289 3.19e-71 234
MS.gene53022.t1 AT5G18190 77.778 126 28 0 42 167 164 289 3.19e-71 234
MS.gene53022.t1 AT3G03940 75.397 126 31 0 42 167 174 299 2.49e-68 226
MS.gene53022.t1 AT4G28540 37.324 142 82 3 37 178 34 168 5.72e-23 99.4
MS.gene53022.t1 AT5G44100 36.620 142 83 3 37 178 30 164 2.26e-22 97.4
MS.gene53022.t1 AT5G44100 36.620 142 83 3 37 178 30 164 2.26e-22 97.4
MS.gene53022.t1 AT3G23340 37.324 142 82 3 37 178 16 150 3.22e-22 96.7
MS.gene53022.t1 AT1G03930 36.620 142 83 3 37 178 30 164 3.88e-22 96.7
MS.gene53022.t1 AT3G23340 37.324 142 82 3 37 178 30 164 4.97e-22 96.3
MS.gene53022.t1 AT5G23540 93.333 45 3 0 1 45 40 84 2.20e-21 92.8
MS.gene53022.t1 AT5G43320 35.211 142 85 3 37 178 30 164 7.15e-21 93.2
MS.gene53022.t1 AT4G28860 35.570 149 86 3 19 167 18 156 1.01e-20 92.0
MS.gene53022.t1 AT4G28860 35.570 149 86 3 19 167 18 156 1.77e-20 91.7
MS.gene53022.t1 AT4G14340 35.915 142 84 3 37 178 36 170 2.00e-20 91.7
MS.gene53022.t1 AT4G14340 35.915 142 84 3 37 178 36 170 2.73e-20 90.5
MS.gene53022.t1 AT5G43320 35.211 142 85 3 37 178 30 164 3.25e-20 90.5
MS.gene53022.t1 AT5G43320 35.211 142 85 3 37 178 30 164 3.25e-20 90.5
MS.gene53022.t1 AT4G26100 36.975 119 70 2 60 178 51 164 8.55e-20 89.7
MS.gene53022.t1 AT2G19470 35.211 142 85 3 37 178 30 164 8.80e-20 89.7
MS.gene53022.t1 AT1G04440 33.803 142 87 3 37 178 30 164 1.03e-19 89.7
MS.gene53022.t1 AT4G28880 35.000 160 91 4 19 178 18 164 1.56e-19 89.0
MS.gene53022.t1 AT4G28880 35.000 160 91 4 19 178 18 164 1.56e-19 89.0
MS.gene53022.t1 AT4G28880 35.000 160 91 4 19 178 18 164 1.56e-19 89.0
MS.gene53022.t1 AT4G28880 35.000 160 91 4 19 178 18 164 1.56e-19 89.0
MS.gene53022.t1 AT5G57015 33.803 142 87 3 37 178 30 164 6.56e-19 87.4
MS.gene53022.t1 AT1G72710 33.588 131 83 2 37 167 30 156 2.02e-18 85.9
MS.gene53022.t1 AT4G16630 58.209 67 26 1 142 208 464 528 1.70e-16 80.9
MS.gene53022.t1 AT4G16630 47.826 138 59 2 195 319 601 738 8.14e-13 69.7
MS.gene53022.t1 AT5G23540 91.429 35 3 0 11 45 1 35 4.51e-14 71.2

Find 91 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTGTACCCATGGAGGTTA+TGG 0.216162 1.1:+55962182 MS.gene53022:CDS
AACTTTCTGCGCTTCTTTCT+AGG 0.271793 1.1:-55965221 None:intergenic
CTTCCTTTATAATGTACTTT+GGG 0.297099 1.1:-55962990 None:intergenic
ATCACGAGGACATGCAAAAT+TGG 0.304499 1.1:-55964354 None:intergenic
GGTGTACCCATGGAGGTTAT+GGG 0.324107 1.1:+55962183 MS.gene53022:CDS
TTTCTTGTTGATCTCGGATT+AGG 0.333361 1.1:+55964215 MS.gene53022:CDS
AAGGCCGTCAAGAGAGGTTC+TGG 0.334721 1.1:+55965478 MS.gene53022:CDS
GTCCAAGCTTGTGGGATGTT+TGG 0.336979 1.1:+55963142 MS.gene53022:CDS
GGAGGTTATGGGTTTGATGC+TGG 0.342706 1.1:+55962194 MS.gene53022:CDS
TTCTTCTCTTGTGCTGTACC+TGG 0.364237 1.1:-55964188 None:intergenic
TCTTCCTTTATAATGTACTT+TGG 0.373082 1.1:-55962991 None:intergenic
AGCAATGCATGCCACCATTT+CGG 0.376237 1.1:-55963975 None:intergenic
TGCATAAAGTTGCAGGATAA+GGG 0.384167 1.1:+55965388 MS.gene53022:intron
ATGCATAAAGTTGCAGGATA+AGG 0.397386 1.1:+55965387 MS.gene53022:intron
TTTGATGCTGGGAGAATTTG+TGG 0.400300 1.1:+55962206 MS.gene53022:CDS
ATACCCAAAGTACATTATAA+AGG 0.411632 1.1:+55962987 MS.gene53022:CDS
CATGTCCTCGTGATCTTACC+AGG 0.425257 1.1:+55964363 MS.gene53022:CDS
TTTAAGGTCTTCAGCTTGCT+GGG 0.426534 1.1:-55965028 None:intergenic
GGGGACAAATAAGAATGATA+AGG 0.430514 1.1:+55965408 MS.gene53022:CDS
TCCTCCAGAACCTCTCTTGA+CGG 0.432105 1.1:-55965482 None:intergenic
TAGAGAGATGTTGGAGGACG+AGG 0.459989 1.1:+55965253 MS.gene53022:CDS
TAGAAAGAAGCGCAGAAAGT+TGG 0.461288 1.1:+55965223 MS.gene53022:CDS
GATGTTGGAGGACGAGGAGC+AGG 0.461585 1.1:+55965259 MS.gene53022:CDS
TGACTGTTAACAGGCATCCT+TGG 0.469624 1.1:+55964969 MS.gene53022:intron
TTCATTGTAGGTATGTGCAT+GGG 0.470805 1.1:+55964132 MS.gene53022:intron
AAATTGTTTCTTGTTGATCT+CGG 0.470903 1.1:+55964209 MS.gene53022:CDS
GGGACAAATAAGAATGATAA+GGG 0.471417 1.1:+55965409 MS.gene53022:CDS
GAGGTTATGGGTTTGATGCT+GGG 0.472362 1.1:+55962195 MS.gene53022:CDS
GGAAGCTGCTAGAGAGATGT+TGG 0.472686 1.1:+55965244 MS.gene53022:CDS
ATGTAGGATGTCTGCCGAAA+TGG 0.477227 1.1:+55963961 MS.gene53022:intron
GCAATGCCACAGAGTGGAAC+TGG 0.486016 1.1:+55962261 MS.gene53022:CDS
AGCTGAAGACCTTAAAATGA+AGG 0.492483 1.1:+55965035 MS.gene53022:CDS
TTCCAAACATCCCACAAGCT+TGG 0.493712 1.1:-55963144 None:intergenic
AACAGTAAAGGTTGCAACTA+CGG 0.495338 1.1:+55962778 MS.gene53022:CDS
TTAACAGGCATCCTTGGATA+AGG 0.499264 1.1:+55964975 MS.gene53022:intron
CATGCTTGGTCCAAGCTTGT+GGG 0.512086 1.1:+55963134 MS.gene53022:CDS
CCGACGTGCAAAAGCAGTAA+AGG 0.519197 1.1:+55965459 MS.gene53022:CDS
TTGAAGCTATGTTCATCGAG+TGG 0.519789 1.1:+55964541 MS.gene53022:intron
AGCACCCTTGGTGGAAGTCA+TGG 0.521686 1.1:+55962963 MS.gene53022:intron
AAGAGAGGTTCTGGAGGAGT+AGG 0.521956 1.1:+55965487 MS.gene53022:CDS
GTGGGTCGTACTACAAGAGC+TGG 0.522691 1.1:+55964560 MS.gene53022:CDS
ACTACAAGAGCTGGGAGAGC+GGG 0.525480 1.1:+55964569 MS.gene53022:CDS
ACCTTAAAATGAAGGAAAAG+AGG 0.529710 1.1:+55965043 MS.gene53022:CDS
CATCAAACCCATAACCTCCA+TGG 0.537981 1.1:-55962190 None:intergenic
AAAGAGGAAGCGGGAGCGAG+AGG 0.538222 1.1:+55965059 MS.gene53022:CDS
GTTCATTGTAGGTATGTGCA+TGG 0.539598 1.1:+55964131 MS.gene53022:intron
TTATCAATAATAGGTAGGGC+TGG 0.544991 1.1:+55962162 MS.gene53022:intron
ATGCAGGTTATGGACATGCT+TGG 0.546212 1.1:+55963120 MS.gene53022:intron
TTTGAACATAGAAACAGTAA+AGG 0.551586 1.1:+55962766 MS.gene53022:CDS
TGAAGCTATGTTCATCGAGT+GGG 0.555254 1.1:+55964542 MS.gene53022:intron
TGGGATGTTTGGAATACCAC+AGG 0.555511 1.1:+55963153 MS.gene53022:CDS
TCTTGGAGAAGATGCACTCA+AGG 0.557515 1.1:+55964014 MS.gene53022:CDS
ACATGCTTGGTCCAAGCTTG+TGG 0.566277 1.1:+55963133 MS.gene53022:CDS
TTGTACACTTGCCACTCGTA+AGG 0.569716 1.1:-55962805 None:intergenic
AGGTAGGGCTGGTGTACCCA+TGG 0.574474 1.1:+55962173 MS.gene53022:intron
TACACTTGCCACTCGTAAGG+AGG 0.576490 1.1:-55962802 None:intergenic
AGAATCATCTTCCTTATCCA+AGG 0.580388 1.1:-55964986 None:intergenic
TGTTTGGAATACCACAGGCC+AGG 0.580670 1.1:+55963158 MS.gene53022:CDS
AAATGAAGGAAAAGAGGAAG+CGG 0.582054 1.1:+55965049 MS.gene53022:CDS
GGAAGATGATTCTTCTCAGA+AGG 0.583808 1.1:+55964996 MS.gene53022:CDS
GCATAAAGTTGCAGGATAAG+GGG 0.584401 1.1:+55965389 MS.gene53022:intron
GCAGTAAAGGCCGTCAAGAG+AGG 0.586262 1.1:+55965472 MS.gene53022:CDS
CATTTGTTACTGATAATGAC+CGG 0.588979 1.1:+55964603 MS.gene53022:CDS
AATTCCCTTTCAGGTACAAG+AGG 0.591283 1.1:+55965663 MS.gene53022:intron
ACAAATAAGAATGATAAGGG+TGG 0.592187 1.1:+55965412 MS.gene53022:CDS
CTTGGAGAAGATGCACTCAA+GGG 0.598220 1.1:+55964015 MS.gene53022:CDS
ATCAAACCCATAACCTCCAT+GGG 0.598917 1.1:-55962189 None:intergenic
TACTACAAGAGCTGGGAGAG+CGG 0.603895 1.1:+55964568 MS.gene53022:CDS
AGCTGCTAGAGAGATGTTGG+AGG 0.605627 1.1:+55965247 MS.gene53022:CDS
GCCGTCAAGAGAGGTTCTGG+AGG 0.612330 1.1:+55965481 MS.gene53022:CDS
AGATGATTCTTCTCAGAAGG+TGG 0.612765 1.1:+55964999 MS.gene53022:CDS
AATGAAGGAAAAGAGGAAGC+GGG 0.617544 1.1:+55965050 MS.gene53022:CDS
TTATACTCACGCCTGGCCTG+TGG 0.625190 1.1:-55963169 None:intergenic
TCATTGTAGGTATGTGCATG+GGG 0.626331 1.1:+55964133 MS.gene53022:intron
AATCGTTCAAAAGCAAGTCA+AGG 0.626979 1.1:+55965521 MS.gene53022:CDS
TATTCCATGACTTCCACCAA+GGG 0.633471 1.1:-55962967 None:intergenic
TTGGAGAAGATGCACTCAAG+GGG 0.638893 1.1:+55964016 MS.gene53022:CDS
ACACTTGCCACTCGTAAGGA+GGG 0.641152 1.1:-55962801 None:intergenic
ACAAGGAGAATATTACGTGA+TGG 0.641400 1.1:+55963013 MS.gene53022:CDS
TGGGTCGTACTACAAGAGCT+GGG 0.649290 1.1:+55964561 MS.gene53022:CDS
CTATACCTGGTAAGATCACG+AGG 0.653594 1.1:-55964368 None:intergenic
TAGGATGTCTGCCGAAATGG+TGG 0.657696 1.1:+55963964 MS.gene53022:intron
GTACATTATAAAGGAAGACA+AGG 0.658821 1.1:+55962996 MS.gene53022:CDS
CTCCTCAAGATGCTTAAACA+CGG 0.660251 1.1:+55961978 None:intergenic
AATGGTGGCATGCATTGCTG+TGG 0.668208 1.1:+55963979 MS.gene53022:CDS
GTATTCCATGACTTCCACCA+AGG 0.669569 1.1:-55962968 None:intergenic
CTAACACCAGTTCCACTCTG+TGG 0.696288 1.1:-55962267 None:intergenic
ACTACGGCCCTCCTTACGAG+TGG 0.697469 1.1:+55962794 MS.gene53022:CDS
TAGGGCTGGTGTACCCATGG+AGG 0.700123 1.1:+55962176 MS.gene53022:CDS
TGGAGAAGATGCACTCAAGG+GGG 0.711646 1.1:+55964017 MS.gene53022:CDS
GTGTTTGCAATGCCACAGAG+TGG 0.719761 1.1:+55962255 MS.gene53022:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAAAGAATAAAAAATAA+TGG - chr1.1:55964700-55964719 None:intergenic 10.0%
!!! ATTATTTTTTATTCTTTTCA+TGG + chr1.1:55964699-55964718 MS.gene53022:intron 10.0%
!!! ATTTTAACTTAATTAAATCA+TGG + chr1.1:55962095-55962114 MS.gene53022:intron 10.0%
!!! TTATTTTTTATTCTTTTCAT+GGG + chr1.1:55964700-55964719 MS.gene53022:intron 10.0%
!!! TTTTAACTTAATTAAATCAT+GGG + chr1.1:55962096-55962115 MS.gene53022:intron 10.0%
!! AAATCAATATAACAAACTAA+AGG - chr1.1:55964076-55964095 None:intergenic 15.0%
!! AATATACAATCAATATGTAA+CGG - chr1.1:55963248-55963267 None:intergenic 15.0%
!! ATTATCATTATATTATATGC+AGG + chr1.1:55963104-55963123 MS.gene53022:intron 15.0%
!! TCATTAAAAAAATAGCTAAT+TGG - chr1.1:55963085-55963104 None:intergenic 15.0%
!! TTTCATTTCTTATTAACAAA+AGG - chr1.1:55964949-55964968 None:intergenic 15.0%
!! TTTCTTTGTTAAGATTATAT+TGG + chr1.1:55963274-55963293 MS.gene53022:intron 15.0%
!!! AAAAAATAATGGTTTTTCAA+GGG - chr1.1:55964689-55964708 None:intergenic 15.0%
!!! AGATTAGTTATATTTTGTAT+AGG + chr1.1:55963373-55963392 MS.gene53022:intron 15.0%
!!! GTGTTTTTTTTATCAATAAT+AGG + chr1.1:55962153-55962172 MS.gene53022:intron 15.0%
!!! TAAAAAATAATGGTTTTTCA+AGG - chr1.1:55964690-55964709 None:intergenic 15.0%
!!! TTTTTTATCAATAATAGGTA+GGG + chr1.1:55962158-55962177 MS.gene53022:intron 15.0%
!!! TTTTTTTATCAATAATAGGT+AGG + chr1.1:55962157-55962176 MS.gene53022:intron 15.0%
!! AATGGAAAAATAAGATATAG+AGG - chr1.1:55963823-55963842 None:intergenic 20.0%
!! ATACTATGTTAGAAAATCTT+AGG - chr1.1:55964792-55964811 None:intergenic 20.0%
!! ATGATTTATGTAGAACATTA+TGG + chr1.1:55963419-55963438 MS.gene53022:intron 20.0%
!! ATTATATTATATGCAGGTTA+TGG + chr1.1:55963110-55963129 MS.gene53022:intron 20.0%
!! ATTCAAAGAATTTACTTGAA+TGG - chr1.1:55963717-55963736 None:intergenic 20.0%
!! GAAGTAAATACAATCATAAA+AGG - chr1.1:55963196-55963215 None:intergenic 20.0%
!! GTATTTCAATTTCAAAAGTA+GGG + chr1.1:55962118-55962137 MS.gene53022:intron 20.0%
!! TAGAAAATCTTAGGTATTTA+CGG - chr1.1:55964783-55964802 None:intergenic 20.0%
!! TTAAAACCAATGAAAATACT+GGG - chr1.1:55962707-55962726 None:intergenic 20.0%
!!! ATTTAAGAAGTGATTACTTT+TGG - chr1.1:55965293-55965312 None:intergenic 20.0%
!!! TAACTAATCTTGTTTTAGTT+TGG - chr1.1:55963363-55963382 None:intergenic 20.0%
!!! TGATTTAATTTTGAGTTTTC+TGG + chr1.1:55964090-55964109 MS.gene53022:intron 20.0%
!!! TGTGTTTGTCTTTTTTTTAA+TGG + chr1.1:55963910-55963929 MS.gene53022:intron 20.0%
!!! TTAGTTATATTTTGTATAGG+TGG + chr1.1:55963376-55963395 MS.gene53022:intron 20.0%
!!! TTATTGTTGATTTGTCAATT+AGG + chr1.1:55962636-55962655 MS.gene53022:intron 20.0%
! AAAAAATAGCTAATTGGCTA+AGG - chr1.1:55963079-55963098 None:intergenic 25.0%
! AACATGAATAACACAATGTT+TGG - chr1.1:55962463-55962482 None:intergenic 25.0%
! AATAGTTTCAGAAATGAGAT+AGG - chr1.1:55965561-55965580 None:intergenic 25.0%
! AATTGCAGTATATTGCAAAT+TGG + chr1.1:55962870-55962889 MS.gene53022:intron 25.0%
! ACTTGATGGAAATATCTTTA+AGG + chr1.1:55965186-55965205 MS.gene53022:intron 25.0%
! ATACCCAAAGTACATTATAA+AGG + chr1.1:55962987-55963006 MS.gene53022:CDS 25.0%
! CAAAACCCTAATTATGAAAT+TGG - chr1.1:55962043-55962062 None:intergenic 25.0%
! CTTAAAACCAATGAAAATAC+TGG - chr1.1:55962708-55962727 None:intergenic 25.0%
! CTTAGATATAACAATTGTGA+AGG - chr1.1:55963781-55963800 None:intergenic 25.0%
! CTTCCTTTATAATGTACTTT+GGG - chr1.1:55962993-55963012 None:intergenic 25.0%
! CTTTAACCTATTCAAATCAT+TGG + chr1.1:55962013-55962032 MS.gene53022:intron 25.0%
! GCTATCCAATTTCATAATTA+GGG + chr1.1:55962035-55962054 MS.gene53022:intron 25.0%
! GGTATTTCAATTTCAAAAGT+AGG + chr1.1:55962117-55962136 MS.gene53022:intron 25.0%
! GTCAAATACAAGTAAATACT+GGG - chr1.1:55964281-55964300 None:intergenic 25.0%
! TACATAATTAATGCACAAAG+CGG - chr1.1:55963754-55963773 None:intergenic 25.0%
! TATAAGGTAACTAAAACTGA+AGG - chr1.1:55964475-55964494 None:intergenic 25.0%
! TATTTAGTTACCTAGTCATA+TGG - chr1.1:55963334-55963353 None:intergenic 25.0%
! TCAAGGGATATTATATAAAG+TGG - chr1.1:55964673-55964692 None:intergenic 25.0%
! TCTTCCTTTATAATGTACTT+TGG - chr1.1:55962994-55963013 None:intergenic 25.0%
! TGTCAAATACAAGTAAATAC+TGG - chr1.1:55964282-55964301 None:intergenic 25.0%
! TTAATTTCTTCCATATGACT+AGG + chr1.1:55963321-55963340 MS.gene53022:intron 25.0%
! TTATCAACGATATGTTTCAT+AGG - chr1.1:55964394-55964413 None:intergenic 25.0%
! TTTGAACATAGAAACAGTAA+AGG + chr1.1:55962766-55962785 MS.gene53022:CDS 25.0%
!! AAAGGGAGTATATTAGTTAT+TGG - chr1.1:55963864-55963883 None:intergenic 25.0%
!! AAATTGTTTCTTGTTGATCT+CGG + chr1.1:55964209-55964228 MS.gene53022:CDS 25.0%
!! AGTCTCTTAATTTTACTTAC+AGG + chr1.1:55964301-55964320 MS.gene53022:intron 25.0%
!! GTCTCTTAATTTTACTTACA+GGG + chr1.1:55964302-55964321 MS.gene53022:intron 25.0%
!! TGATTGTCTTTTGAATATGT+AGG + chr1.1:55963945-55963964 MS.gene53022:intron 25.0%
!! TTGCTATCTTTTCATATTTC+AGG + chr1.1:55962732-55962751 MS.gene53022:intron 25.0%
!!! TTTGTTTTGCGACATATATA+AGG + chr1.1:55965121-55965140 MS.gene53022:intron 25.0%
AACTTTCTCAGTATTGTCAA+AGG + chr1.1:55965316-55965335 MS.gene53022:intron 30.0%
AATGAAATGCATAAAGTTGC+AGG + chr1.1:55965381-55965400 MS.gene53022:intron 30.0%
ACAAATAAGAATGATAAGGG+TGG + chr1.1:55965412-55965431 MS.gene53022:CDS 30.0%
ACATAATTAATGCACAAAGC+GGG - chr1.1:55963753-55963772 None:intergenic 30.0%
ACCTTAAAATGAAGGAAAAG+AGG + chr1.1:55965043-55965062 MS.gene53022:CDS 30.0%
ATACTGGGTGAGAATAAAAA+AGG - chr1.1:55962692-55962711 None:intergenic 30.0%
ATATTGCCTTTGTTCATTGT+AGG + chr1.1:55964120-55964139 MS.gene53022:intron 30.0%
ATGTCAGTTAATCACTAGTT+CGG - chr1.1:55964888-55964907 None:intergenic 30.0%
CGACATATATAAGGTACATA+AGG + chr1.1:55965130-55965149 MS.gene53022:intron 30.0%
GAAATGAAATGACTGTTAAC+AGG + chr1.1:55964960-55964979 MS.gene53022:intron 30.0%
GATACAGAAACAAGACATAA+AGG - chr1.1:55962605-55962624 None:intergenic 30.0%
GGCTATCCAATTTCATAATT+AGG + chr1.1:55962034-55962053 MS.gene53022:intron 30.0%
GGGACAAATAAGAATGATAA+GGG + chr1.1:55965409-55965428 MS.gene53022:CDS 30.0%
GTAATGAAAAGTGAGGAATA+AGG - chr1.1:55965355-55965374 None:intergenic 30.0%
GTACATTATAAAGGAAGACA+AGG + chr1.1:55962996-55963015 MS.gene53022:CDS 30.0%
GTGAAATGAGATGATATACA+AGG - chr1.1:55963057-55963076 None:intergenic 30.0%
GTTAAGATTATATTGGAGTG+AGG + chr1.1:55963281-55963300 MS.gene53022:intron 30.0%
TAACCGGAAAAGACAAAAAA+GGG - chr1.1:55963881-55963900 None:intergenic 30.0%
TAGTATTATGCATGTGAAGA+AGG + chr1.1:55964806-55964825 MS.gene53022:intron 30.0%
TATAAGCACTTATGTGACAA+GGG + chr1.1:55962419-55962438 MS.gene53022:intron 30.0%
TATATCTAAGCCTTCTATTC+TGG + chr1.1:55963791-55963810 MS.gene53022:intron 30.0%
TATGTACAAGTTTCGTGAAA+AGG + chr1.1:55962901-55962920 MS.gene53022:intron 30.0%
TGTTATTCAAATTCCCTTTC+AGG + chr1.1:55965654-55965673 MS.gene53022:intron 30.0%
TTAACCGGAAAAGACAAAAA+AGG - chr1.1:55963882-55963901 None:intergenic 30.0%
TTGTCAATTAGGTTCTACTA+TGG + chr1.1:55962647-55962666 MS.gene53022:intron 30.0%
TTTCAGTGTAATGAAAAGTG+AGG - chr1.1:55965362-55965381 None:intergenic 30.0%
TTTGAACACGAATAATGTCA+AGG - chr1.1:55964328-55964347 None:intergenic 30.0%
! AAACCAGAGAACTTTTTACT+AGG + chr1.1:55964161-55964180 MS.gene53022:CDS 30.0%
! CATTTGTTACTGATAATGAC+CGG + chr1.1:55964603-55964622 MS.gene53022:CDS 30.0%
! CTAGTGATTAACTGACATTT+TGG + chr1.1:55964890-55964909 MS.gene53022:intron 30.0%
! CTATCTTTTCATATTTCAGG+TGG + chr1.1:55962735-55962754 MS.gene53022:intron 30.0%
! GTTTTTCTTGTAGGTGTAAA+TGG + chr1.1:55963492-55963511 MS.gene53022:intron 30.0%
! TATTTTGTATAGGTGGTTTG+TGG + chr1.1:55963383-55963402 MS.gene53022:intron 30.0%
! TCCTCTTTTCCTTCATTTTA+AGG - chr1.1:55965047-55965066 None:intergenic 30.0%
!! CAAAGTTGATAAAGATGTGA+AGG - chr1.1:55964524-55964543 None:intergenic 30.0%
AAACACAGCAGAATGTTAAC+CGG - chr1.1:55963897-55963916 None:intergenic 35.0%
AAATGAAGGAAAAGAGGAAG+CGG + chr1.1:55965049-55965068 MS.gene53022:CDS 35.0%
AACAGTAAAGGTTGCAACTA+CGG + chr1.1:55962778-55962797 MS.gene53022:CDS 35.0%
AATCGTTCAAAAGCAAGTCA+AGG + chr1.1:55965521-55965540 MS.gene53022:CDS 35.0%
ACAAGGAGAATATTACGTGA+TGG + chr1.1:55963013-55963032 MS.gene53022:CDS 35.0%
AGAATCATCTTCCTTATCCA+AGG - chr1.1:55964989-55965008 None:intergenic 35.0%
AGCTGAAGACCTTAAAATGA+AGG + chr1.1:55965035-55965054 MS.gene53022:CDS 35.0%
AGGGAGAATGGGATTATATA+AGG - chr1.1:55964491-55964510 None:intergenic 35.0%
ATACACAACAGGTTCTACTA+TGG + chr1.1:55962578-55962597 MS.gene53022:intron 35.0%
ATCATCATGCACAACAAGAT+TGG - chr1.1:55965098-55965117 None:intergenic 35.0%
ATGCATAAAGTTGCAGGATA+AGG + chr1.1:55965387-55965406 MS.gene53022:intron 35.0%
ATGTGAAGGTCAATAACTCA+GGG - chr1.1:55964510-55964529 None:intergenic 35.0%
CACATACCTACAATGAACAA+AGG - chr1.1:55964129-55964148 None:intergenic 35.0%
CGACTCACATATTTACTTGA+TGG + chr1.1:55965172-55965191 MS.gene53022:intron 35.0%
CTATAAGCACTTATGTGACA+AGG + chr1.1:55962418-55962437 MS.gene53022:intron 35.0%
CTCACTGTCAAAGAAGAAAA+TGG - chr1.1:55963841-55963860 None:intergenic 35.0%
GGATAGCCAATGATTTGAAT+AGG - chr1.1:55962022-55962041 None:intergenic 35.0%
GGGGACAAATAAGAATGATA+AGG + chr1.1:55965408-55965427 MS.gene53022:CDS 35.0%
GGTAGCTAATCATGTATGTA+TGG - chr1.1:55964762-55964781 None:intergenic 35.0%
TATGGTAGAATCGATTAGAC+TGG - chr1.1:55964744-55964763 None:intergenic 35.0%
TATGTTTCATAGGCTATACC+TGG - chr1.1:55964384-55964403 None:intergenic 35.0%
TCATCATGCACAACAAGATT+GGG - chr1.1:55965097-55965116 None:intergenic 35.0%
TCTCAGTATTGTCAAAGGTT+GGG + chr1.1:55965321-55965340 MS.gene53022:intron 35.0%
TGACCTAGTAAAAAGTTCTC+TGG - chr1.1:55964167-55964186 None:intergenic 35.0%
TGCATAAAGTTGCAGGATAA+GGG + chr1.1:55965388-55965407 MS.gene53022:intron 35.0%
TGTTGACATCAATACACAAC+AGG + chr1.1:55962567-55962586 MS.gene53022:intron 35.0%
TTATCAATAATAGGTAGGGC+TGG + chr1.1:55962162-55962181 MS.gene53022:intron 35.0%
TTCATTGTAGGTATGTGCAT+GGG + chr1.1:55964132-55964151 MS.gene53022:intron 35.0%
TTCTCAGTATTGTCAAAGGT+TGG + chr1.1:55965320-55965339 MS.gene53022:intron 35.0%
TTTCTTGTTGATCTCGGATT+AGG + chr1.1:55964215-55964234 MS.gene53022:CDS 35.0%
! GATGTTCCGCAATCTTTTAA+CGG + chr1.1:55964845-55964864 MS.gene53022:intron 35.0%
! GTTCTACTATGGTTCTACTA+TGG + chr1.1:55962658-55962677 MS.gene53022:intron 35.0%
! TAGCCAATAGTTTGCAGAAT+CGG - chr1.1:55964918-55964937 None:intergenic 35.0%
! TTCTCACCCAGTATTTTCAT+TGG + chr1.1:55962698-55962717 MS.gene53022:intron 35.0%
!! CAATAGCTTTTAGAAGTGAC+CGG - chr1.1:55964625-55964644 None:intergenic 35.0%
!!! ACTCCCTTTTTTGTCTTTTC+CGG + chr1.1:55963875-55963894 MS.gene53022:intron 35.0%
!!! AGCTTGGTTGTTTTTCTTGT+AGG + chr1.1:55963483-55963502 MS.gene53022:intron 35.0%
!!! ATTTTGTTTTGAAGCACCCT+TGG + chr1.1:55962951-55962970 MS.gene53022:intron 35.0%
AAAAGATTGCGGAACATCGA+AGG - chr1.1:55964843-55964862 None:intergenic 40.0%
AAAGATTGCGGAACATCGAA+GGG - chr1.1:55964842-55964861 None:intergenic 40.0%
AACTTTCTGCGCTTCTTTCT+AGG - chr1.1:55965224-55965243 None:intergenic 40.0%
AATGAAGGAAAAGAGGAAGC+GGG + chr1.1:55965050-55965069 MS.gene53022:CDS 40.0%
ACTAAGTAGAATCCGCTACT+TGG - chr1.1:55963456-55963475 None:intergenic 40.0%
ACTTCCTCTTGTACCTGAAA+GGG - chr1.1:55965670-55965689 None:intergenic 40.0%
AGATGATTCTTCTCAGAAGG+TGG + chr1.1:55964999-55965018 MS.gene53022:CDS 40.0%
ATCAAACCCATAACCTCCAT+GGG - chr1.1:55962192-55962211 None:intergenic 40.0%
ATCACGAGGACATGCAAAAT+TGG - chr1.1:55964357-55964376 None:intergenic 40.0%
CCTTCACCGTTAAAAGATTG+CGG - chr1.1:55964854-55964873 None:intergenic 40.0%
CTACTTAGTGGGATAAAGCT+TGG + chr1.1:55963467-55963486 MS.gene53022:intron 40.0%
CTCAGTATTGTCAAAGGTTG+GGG + chr1.1:55965322-55965341 MS.gene53022:intron 40.0%
CTCCAGATCGAGAATGAAAT+CGG - chr1.1:55965614-55965633 None:intergenic 40.0%
GATCCGATTCTGCAAACTAT+TGG + chr1.1:55964912-55964931 MS.gene53022:intron 40.0%
GATGTGAAGGTCAATAACTC+AGG - chr1.1:55964511-55964530 None:intergenic 40.0%
GCATAAAGTTGCAGGATAAG+GGG + chr1.1:55965389-55965408 MS.gene53022:intron 40.0%
GGAAGATGATTCTTCTCAGA+AGG + chr1.1:55964996-55965015 MS.gene53022:CDS 40.0%
GTCAATAACTCAGGGAGAAT+GGG - chr1.1:55964502-55964521 None:intergenic 40.0%
GTTCATTGTAGGTATGTGCA+TGG + chr1.1:55964131-55964150 MS.gene53022:intron 40.0%
TACCATTCACATCCTGGATT+TGG + chr1.1:55962529-55962548 MS.gene53022:intron 40.0%
TACTTCCTCTTGTACCTGAA+AGG - chr1.1:55965671-55965690 None:intergenic 40.0%
TATTCCATGACTTCCACCAA+GGG - chr1.1:55962970-55962989 None:intergenic 40.0%
TCATTGTAGGTATGTGCATG+GGG + chr1.1:55964133-55964152 MS.gene53022:intron 40.0%
TGAAGCTATGTTCATCGAGT+GGG + chr1.1:55964542-55964561 MS.gene53022:intron 40.0%
TTAACAGGCATCCTTGGATA+AGG + chr1.1:55964975-55964994 MS.gene53022:intron 40.0%
TTGAAGCTATGTTCATCGAG+TGG + chr1.1:55964541-55964560 MS.gene53022:intron 40.0%
TTTGATGCTGGGAGAATTTG+TGG + chr1.1:55962206-55962225 MS.gene53022:CDS 40.0%
! AACTTTTTACTAGGTCAGCC+AGG + chr1.1:55964170-55964189 MS.gene53022:CDS 40.0%
! AATTCCCTTTCAGGTACAAG+AGG + chr1.1:55965663-55965682 MS.gene53022:intron 40.0%
! CAATCTTTTAACGGTGAAGG+TGG + chr1.1:55964854-55964873 MS.gene53022:intron 40.0%
! TAGAAAGAAGCGCAGAAAGT+TGG + chr1.1:55965223-55965242 MS.gene53022:CDS 40.0%
! TGTATAGGTGGTTTGTGGTT+TGG + chr1.1:55963388-55963407 MS.gene53022:intron 40.0%
! TTTAAGGTCTTCAGCTTGCT+GGG - chr1.1:55965031-55965050 None:intergenic 40.0%
!! AAGTAGCGGATTCTACTTAG+TGG + chr1.1:55963455-55963474 MS.gene53022:intron 40.0%
!! AGTAGCGGATTCTACTTAGT+GGG + chr1.1:55963456-55963475 MS.gene53022:intron 40.0%
!! TACCGATTTCATTCTCGATC+TGG + chr1.1:55965609-55965628 MS.gene53022:intron 40.0%
!! TGTGGAGTCATTTTCGATCT+TGG + chr1.1:55963997-55964016 MS.gene53022:CDS 40.0%
!!! TTTTAAGGTCTTCAGCTTGC+TGG - chr1.1:55965032-55965051 None:intergenic 40.0%
AAAAGGCTTATACTCACGCC+TGG - chr1.1:55963179-55963198 None:intergenic 45.0%
AGCAATGCATGCCACCATTT+CGG - chr1.1:55963978-55963997 None:intergenic 45.0%
AGCCAAATCCAGGATGTGAA+TGG - chr1.1:55962534-55962553 None:intergenic 45.0%
ATCCGCTACTTGGATCAAAC+AGG - chr1.1:55963446-55963465 None:intergenic 45.0%
ATGCAGGTTATGGACATGCT+TGG + chr1.1:55963120-55963139 MS.gene53022:intron 45.0%
ATGTAGGATGTCTGCCGAAA+TGG + chr1.1:55963961-55963980 MS.gene53022:intron 45.0%
CATCAAACCCATAACCTCCA+TGG - chr1.1:55962193-55962212 None:intergenic 45.0%
CTATACCTGGTAAGATCACG+AGG - chr1.1:55964371-55964390 None:intergenic 45.0%
CTTGGAGAAGATGCACTCAA+GGG + chr1.1:55964015-55964034 MS.gene53022:CDS 45.0%
GAGGTTATGGGTTTGATGCT+GGG + chr1.1:55962195-55962214 MS.gene53022:CDS 45.0%
GCACTTATGTGACAAGGGAT+TGG + chr1.1:55962424-55962443 MS.gene53022:intron 45.0%
GGTCAATAACTCAGGGAGAA+TGG - chr1.1:55964503-55964522 None:intergenic 45.0%
GTATTCCATGACTTCCACCA+AGG - chr1.1:55962971-55962990 None:intergenic 45.0%
TCCGCTACTTGGATCAAACA+GGG - chr1.1:55963445-55963464 None:intergenic 45.0%
TCTTGGAGAAGATGCACTCA+AGG + chr1.1:55964014-55964033 MS.gene53022:CDS 45.0%
TGACTGTTAACAGGCATCCT+TGG + chr1.1:55964969-55964988 MS.gene53022:intron 45.0%
TGCAGACGAGAGATAGTTGT+TGG + chr1.1:55962502-55962521 MS.gene53022:intron 45.0%
TTAATGCACAAAGCGGGTCA+AGG - chr1.1:55963747-55963766 None:intergenic 45.0%
TTCCAAACATCCCACAAGCT+TGG - chr1.1:55963147-55963166 None:intergenic 45.0%
TTCTTCTCTTGTGCTGTACC+TGG - chr1.1:55964191-55964210 None:intergenic 45.0%
TTGGAGAAGATGCACTCAAG+GGG + chr1.1:55964016-55964035 MS.gene53022:CDS 45.0%
TTGTACACTTGCCACTCGTA+AGG - chr1.1:55962808-55962827 None:intergenic 45.0%
! CCGCAATCTTTTAACGGTGA+AGG + chr1.1:55964851-55964870 MS.gene53022:intron 45.0%
! TGGGATGTTTGGAATACCAC+AGG + chr1.1:55963153-55963172 MS.gene53022:CDS 45.0%
!! CCTTTACTGCTTTTGCACGT+CGG - chr1.1:55965462-55965481 None:intergenic 45.0%
!!! TTGTTTTGAAGCACCCTTGG+TGG + chr1.1:55962954-55962973 MS.gene53022:intron 45.0%
AATGGTGGCATGCATTGCTG+TGG + chr1.1:55963979-55963998 MS.gene53022:CDS 50.0%
ACACTTGCCACTCGTAAGGA+GGG - chr1.1:55962804-55962823 None:intergenic 50.0%
ACATGCTTGGTCCAAGCTTG+TGG + chr1.1:55963133-55963152 MS.gene53022:CDS 50.0%
AGCTGCTAGAGAGATGTTGG+AGG + chr1.1:55965247-55965266 MS.gene53022:CDS 50.0%
CACATCCTGGATTTGGCTGT+TGG + chr1.1:55962536-55962555 MS.gene53022:intron 50.0%
CATGCTTGGTCCAAGCTTGT+GGG + chr1.1:55963134-55963153 MS.gene53022:CDS 50.0%
CATGTCCTCGTGATCTTACC+AGG + chr1.1:55964363-55964382 MS.gene53022:CDS 50.0%
CCGACGTGCAAAAGCAGTAA+AGG + chr1.1:55965459-55965478 MS.gene53022:CDS 50.0%
CGAGTGGCAAGTGTACAAGT+AGG + chr1.1:55962810-55962829 MS.gene53022:intron 50.0%
CTAACACCAGTTCCACTCTG+TGG - chr1.1:55962270-55962289 None:intergenic 50.0%
GACAACCAACAGCCAAATCC+AGG - chr1.1:55962544-55962563 None:intergenic 50.0%
GACGAGAGATAGTTGTTGGC+TGG + chr1.1:55962506-55962525 MS.gene53022:intron 50.0%
GAGGACACAGCCAGAATAGA+AGG - chr1.1:55963804-55963823 None:intergenic 50.0%
GCCCTGTTTGATCCAAGTAG+CGG + chr1.1:55963441-55963460 MS.gene53022:intron 50.0%
GGAAGCTGCTAGAGAGATGT+TGG + chr1.1:55965244-55965263 MS.gene53022:CDS 50.0%
GGAGGTTATGGGTTTGATGC+TGG + chr1.1:55962194-55962213 MS.gene53022:CDS 50.0%
GGTGTACCCATGGAGGTTAT+GGG + chr1.1:55962183-55962202 MS.gene53022:CDS 50.0%
GTCCAAGCTTGTGGGATGTT+TGG + chr1.1:55963142-55963161 MS.gene53022:CDS 50.0%
GTGTTTGCAATGCCACAGAG+TGG + chr1.1:55962255-55962274 MS.gene53022:CDS 50.0%
TACACTTGCCACTCGTAAGG+AGG - chr1.1:55962805-55962824 None:intergenic 50.0%
TACTACAAGAGCTGGGAGAG+CGG + chr1.1:55964568-55964587 MS.gene53022:CDS 50.0%
TAGAGAGATGTTGGAGGACG+AGG + chr1.1:55965253-55965272 MS.gene53022:CDS 50.0%
TAGGATGTCTGCCGAAATGG+TGG + chr1.1:55963964-55963983 MS.gene53022:intron 50.0%
TCCTCCAGAACCTCTCTTGA+CGG - chr1.1:55965485-55965504 None:intergenic 50.0%
TGGAGAAGATGCACTCAAGG+GGG + chr1.1:55964017-55964036 MS.gene53022:CDS 50.0%
TGGGTCGTACTACAAGAGCT+GGG + chr1.1:55964561-55964580 MS.gene53022:CDS 50.0%
TGGTGTACCCATGGAGGTTA+TGG + chr1.1:55962182-55962201 MS.gene53022:CDS 50.0%
! GGATTTGGCTGTTGGTTGTC+TGG + chr1.1:55962544-55962563 MS.gene53022:intron 50.0%
! TGTTTGGAATACCACAGGCC+AGG + chr1.1:55963158-55963177 MS.gene53022:CDS 50.0%
!! AAGAGAGGTTCTGGAGGAGT+AGG + chr1.1:55965487-55965506 MS.gene53022:CDS 50.0%
AAGGCCGTCAAGAGAGGTTC+TGG + chr1.1:55965478-55965497 MS.gene53022:CDS 55.0%
ACTACAAGAGCTGGGAGAGC+GGG + chr1.1:55964569-55964588 MS.gene53022:CDS 55.0%
AGCACCCTTGGTGGAAGTCA+TGG + chr1.1:55962963-55962982 MS.gene53022:intron 55.0%
GCAATGCCACAGAGTGGAAC+TGG + chr1.1:55962261-55962280 MS.gene53022:CDS 55.0%
GCAGTAAAGGCCGTCAAGAG+AGG + chr1.1:55965472-55965491 MS.gene53022:CDS 55.0%
GGCTGGTACCATTCACATCC+TGG + chr1.1:55962523-55962542 MS.gene53022:intron 55.0%
GTGGGTCGTACTACAAGAGC+TGG + chr1.1:55964560-55964579 MS.gene53022:CDS 55.0%
TAACGGTGAAGGTGGCATGC+TGG + chr1.1:55964862-55964881 MS.gene53022:intron 55.0%
TTATACTCACGCCTGGCCTG+TGG - chr1.1:55963172-55963191 None:intergenic 55.0%
AAAGAGGAAGCGGGAGCGAG+AGG + chr1.1:55965059-55965078 MS.gene53022:CDS 60.0%
ACTACGGCCCTCCTTACGAG+TGG + chr1.1:55962794-55962813 MS.gene53022:CDS 60.0%
GATGTTGGAGGACGAGGAGC+AGG + chr1.1:55965259-55965278 MS.gene53022:CDS 60.0%
! AGGTAGGGCTGGTGTACCCA+TGG + chr1.1:55962173-55962192 MS.gene53022:intron 60.0%
! GCCGTCAAGAGAGGTTCTGG+AGG + chr1.1:55965481-55965500 MS.gene53022:CDS 60.0%
! TAGGGCTGGTGTACCCATGG+AGG + chr1.1:55962176-55962195 MS.gene53022:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 55961987 55965691 55961987 ID=MS.gene53022
chr1.1 mRNA 55961987 55965691 55961987 ID=MS.gene53022.t1;Parent=MS.gene53022
chr1.1 exon 55961987 55961999 55961987 ID=MS.gene53022.t1.exon1;Parent=MS.gene53022.t1
chr1.1 CDS 55961987 55961999 55961987 ID=cds.MS.gene53022.t1;Parent=MS.gene53022.t1
chr1.1 exon 55962175 55962284 55962175 ID=MS.gene53022.t1.exon2;Parent=MS.gene53022.t1
chr1.1 CDS 55962175 55962284 55962175 ID=cds.MS.gene53022.t1;Parent=MS.gene53022.t1
chr1.1 exon 55962754 55962827 55962754 ID=MS.gene53022.t1.exon3;Parent=MS.gene53022.t1
chr1.1 CDS 55962754 55962827 55962754 ID=cds.MS.gene53022.t1;Parent=MS.gene53022.t1
chr1.1 exon 55962965 55963034 55962965 ID=MS.gene53022.t1.exon4;Parent=MS.gene53022.t1
chr1.1 CDS 55962965 55963034 55962965 ID=cds.MS.gene53022.t1;Parent=MS.gene53022.t1
chr1.1 exon 55963126 55963181 55963126 ID=MS.gene53022.t1.exon5;Parent=MS.gene53022.t1
chr1.1 CDS 55963126 55963181 55963126 ID=cds.MS.gene53022.t1;Parent=MS.gene53022.t1
chr1.1 exon 55963967 55964038 55963967 ID=MS.gene53022.t1.exon6;Parent=MS.gene53022.t1
chr1.1 CDS 55963967 55964038 55963967 ID=cds.MS.gene53022.t1;Parent=MS.gene53022.t1
chr1.1 exon 55964142 55964236 55964142 ID=MS.gene53022.t1.exon7;Parent=MS.gene53022.t1
chr1.1 CDS 55964142 55964236 55964142 ID=cds.MS.gene53022.t1;Parent=MS.gene53022.t1
chr1.1 exon 55964351 55964384 55964351 ID=MS.gene53022.t1.exon8;Parent=MS.gene53022.t1
chr1.1 CDS 55964351 55964384 55964351 ID=cds.MS.gene53022.t1;Parent=MS.gene53022.t1
chr1.1 exon 55964547 55964643 55964547 ID=MS.gene53022.t1.exon9;Parent=MS.gene53022.t1
chr1.1 CDS 55964547 55964643 55964547 ID=cds.MS.gene53022.t1;Parent=MS.gene53022.t1
chr1.1 exon 55964982 55965080 55964982 ID=MS.gene53022.t1.exon10;Parent=MS.gene53022.t1
chr1.1 CDS 55964982 55965080 55964982 ID=cds.MS.gene53022.t1;Parent=MS.gene53022.t1
chr1.1 exon 55965212 55965295 55965212 ID=MS.gene53022.t1.exon11;Parent=MS.gene53022.t1
chr1.1 CDS 55965212 55965295 55965212 ID=cds.MS.gene53022.t1;Parent=MS.gene53022.t1
chr1.1 exon 55965397 55965542 55965397 ID=MS.gene53022.t1.exon12;Parent=MS.gene53022.t1
chr1.1 CDS 55965397 55965542 55965397 ID=cds.MS.gene53022.t1;Parent=MS.gene53022.t1
chr1.1 exon 55965676 55965691 55965676 ID=MS.gene53022.t1.exon13;Parent=MS.gene53022.t1
chr1.1 CDS 55965676 55965691 55965676 ID=cds.MS.gene53022.t1;Parent=MS.gene53022.t1
Gene Sequence

>MS.gene53022

ATGCTTAAACACGGTAAAGTTTCGATCTTTAACCTATTCAAATCATTGGCTATCCAATTTCATAATTAGGGTTTTGTCAATTCGTTTTTTAATCATAATAAAGTTTCAATTTTAACTTAATTAAATCATGGGTATTTCAATTTCAAAAGTAGGGTTTCATCAATTTGTGTTTTTTTTATCAATAATAGGTAGGGCTGGTGTACCCATGGAGGTTATGGGTTTGATGCTGGGAGAATTTGTGGATGAGTATACAGTTCGTGTTGTTGATGTGTTTGCAATGCCACAGAGTGGAACTGGTGTTAGTGTTGAAGCTGTTGATCATAAATAGTTATAGAAATAGCTTTAAGCTTATTTGCATAAGTTGCGATGTTCAAGATAGCTTATGAAAACAATTTGATTTTATTTTATCTGTTGTTATAGAAATAGCTTATCTATAAGCACTTATGTGACAAGGGATTGGTCAAGTTGTTTATCCAAACATTGTGTTATTCATGTTAGTCGTTGCTTGATTGTGTTGCAGACGAGAGATAGTTGTTGGCTGGTACCATTCACATCCTGGATTTGGCTGTTGGTTGTCTGGTGTTGACATCAATACACAACAGGTTCTACTATGGTCCTTTATGTCTTGTTTCTGTATCTATTTTGATTATTATTGTTGATTTGTCAATTAGGTTCTACTATGGTTCTACTATGGTGCTTACACCTTTTTTATTCTCACCCAGTATTTTCATTGGTTTTAAGTTTATTGCTATCTTTTCATATTTCAGGTGGCTTTGAAATTTGAACATAGAAACAGTAAAGGTTGCAACTACGGCCCTCCTTACGAGTGGCAAGTGTACAAGTAGGTATCTTAATTGCAGTATATTGTATAGTAAATTTTTTTAATTGCAGTATATTGCAAATTGGTTTGCATTTATGTACAAGTTTCGTGAAAAGGTAAATTTGTCTGAGATTTGTTTTTTAAATTTTGTTTTGAAGCACCCTTGGTGGAAGTCATGGAATACCCAAAGTACATTATAAAGGAAGACAAGGAGAATATTACGTGATGGTATGATCTACACAATAAGCCTTGTATATCATCTCATTTCACCTTAGCCAATTAGCTATTTTTTTAATGATTATCATTATATTATATGCAGGTTATGGACATGCTTGGTCCAAGCTTGTGGGATGTTTGGAATACCACAGGCCAGGCGTGAGTATAAGCCTTTTATGATTGTATTTACTTCTTTATTGCTCTTGTGTTGTACAATAATGACCGTTACATATTGATTGTATATTTTAAGATTTCTTTGTTAAGATTATATTGGAGTGAGGTGTGACTCAGTTTTAGTTTAATTTCTTCCATATGACTAGGTAACTAAATATACTAACCAAACTAAAACAAGATTAGTTATATTTTGTATAGGTGGTTTGTGGTTTGGCTATTGATATGATTTATGTAGAACATTATGGCCCTGTTTGATCCAAGTAGCGGATTCTACTTAGTGGGATAAAGCTTGGTTGTTTTTCTTGTAGGTGTAAATGGTTTATACTGAACTCTTTGTGATGTCAGTCTTTTGTTTTCATTTTTCGAAGAAAATTTGATCTTGACATTTGTAGAAATCTTGAATTCTACTTTATATGTACTGAACTCTTTGTGATGTCAGTCTTTTGTTTTCATTTTTCGAAGAAAATTTGATCTTGACATTTGTAGAAATCTTGAATTCTACTTTATATGTAAATCACCATTCAAGTAAATTCTTTGAATATTGTAGCCTTGACCCGCTTTGTGCATTAATTATGTATTCTCCTTCACAATTGTTATATCTAAGCCTTCTATTCTGGCTGTGTCCTCTATATCTTATTTTTCCATTTTCTTCTTTGACAGTGAGCCAATAACTAATATACTCCCTTTTTTGTCTTTTCCGGTTAACATTCTGCTGTGTTTGTCTTTTTTTTAATGGAGTTTATTGATTTGATTGTCTTTTGAATATGTAGGATGTCTGCCGAAATGGTGGCATGCATTGCTGTGGAGTCATTTTCGATCTTGGAGAAGATGCACTCAAGGGGGTATGTTATAGATCAAACTCATGCTTGTATTCAGCCTTTAGTTTGTTATATTGATTTAATTTTGAGTTTTCTGGTTTCTAAATATTGCCTTTGTTCATTGTAGGTATGTGCATGGGGATGTAAAACCAGAGAACTTTTTACTAGGTCAGCCAGGTACAGCACAAGAGAAGAAATTGTTTCTTGTTGATCTCGGATTAGGTGAGTAGTTTGAATTTGAAGTGTGAGAAATTTTGTTCTCACCCAGTATTTACTTGTATTTGACAGTCTCTTAATTTTACTTACAGGGCCTTGACATTATTCGTGTTCAAACAGTTACCAATTTTGCATGTCCTCGTGATCTTACCAGGTATAGCCTATGAAACATATCGTTGATAACTGAAAACTCTGCTCTTGATGACGATTGTGATATGTTATCAGTTTTGTACTAGTACATCCTTCAGTTTTAGTTACCTTATATAATCCCATTCTCCCTGAGTTATTGACCTTCACATCTTTATCAACTTTGAAGCTATGTTCATCGAGTGGGTCGTACTACAAGAGCTGGGAGAGCGGGATCTGCTGTCACATTTGTTACTGATAATGACCGGTCACTTCTAAAAGCTATTGTGAGTATCATTTGTAGAATTGTTGACCACTTTATATAATATCCCTTGAAAAACCATTATTTTTTATTCTTTTCATGGGTTGCTAATGATTATTCTGCCAGTCTAATCGATTCTACCATACATACATGATTAGCTACCGTAAATACCTAAGATTTTCTAACATAGTATTATGCATGTGAAGAAGGCTCGTTATTTCCCTTCGATGTTCCGCAATCTTTTAACGGTGAAGGTGGCATGCTGGCCGAACTAGTGATTAACTGACATTTTGGATCCGATTCTGCAAACTATTGGCTAAAATGCAGCCTTTTGTTAATAAGAAATGAAATGACTGTTAACAGGCATCCTTGGATAAGGAAGATGATTCTTCTCAGAAGGTGGTTAGTGCCCAGCAAGCTGAAGACCTTAAAATGAAGGAAAAGAGGAAGCGGGAGCGAGAGGTAAGAAGTGTTTCCCAATCTTGTTGTGCATGATGATCAATTTGTTTTGCGACATATATAAGGTACATAAGGTTGCTTGTGCGCTTTGTTACGACTCACATATTTACTTGATGGAAATATCTTTAAGGCAGAAAAATTTGCCTAGAAAGAAGCGCAGAAAGTTGGAAGCTGCTAGAGAGATGTTGGAGGACGAGGAGCAGGTTGACAAACCAAAAGTAATCACTTCTTAAATGTTAACTTTCTCAGTATTGTCAAAGGTTGGGGTGCATTTCCTTATTCCTCACTTTTCATTACACTGAAAATGAAATGCATAAAGTTGCAGGATAAGGGGACAAATAAGAATGATAAGGGTGGAATGACACTTGTTGATCTTGCATACCGACGTGCAAAAGCAGTAAAGGCCGTCAAGAGAGGTTCTGGAGGAGTAGGAAAAGTCAAGAAATCGTTCAAAAGCAAGTCAAGGTATCATTTGAAAAACCTATCTCATTTCTGAAACTATTCTCTGATCTTTTTAAGAGTCAAGTGAACTACCGATTTCATTCTCGATCTGGAGTGCAATGCTAATAAATAAAATGTTATTCAAATTCCCTTTCAGGTACAAGAGGAAGTAG
Protein sequence

>MS.gene53022.t1

MLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNTTGQAMSAEMVACIAVESFSILEKMHSRGYVHGDVKPENFLLGQPGTAQEKKLFLVDLGLVTNFACPRDLTSYVHRVGRTTRAGRAGSAVTFVTDNDRSLLKAIASLDKEDDSSQKVVSAQQAEDLKMKEKRKREREKNLPRKKRRKLEAAREMLEDEEQVDKPKLQDKGTNKNDKGGMTLVDLAYRRAKAVKAVKRGSGGVGKVKKSFKSKSRYKRK