Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53495.t1 | XP_024629307.1 | 97.7 | 176 | 4 | 0 | 1 | 176 | 1 | 176 | 4.90E-39 | 171 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53495.t1 | P94077 | 75.4 | 187 | 32 | 4 | 1 | 176 | 6 | 189 | 7.4e-20 | 98.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53495.t1 | G7L9L6 | 97.7 | 176 | 4 | 0 | 1 | 176 | 1 | 176 | 3.5e-39 | 171.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene53495.t1 | TF | C2C2-LSD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53495.t1 | MTR_8g089310 | 97.159 | 176 | 5 | 0 | 1 | 176 | 48 | 223 | 3.02e-124 | 349 |
| MS.gene53495.t1 | MTR_8g089310 | 97.159 | 176 | 5 | 0 | 1 | 176 | 14 | 189 | 5.40e-124 | 347 |
| MS.gene53495.t1 | MTR_8g089310 | 97.159 | 176 | 5 | 0 | 1 | 176 | 1 | 176 | 8.77e-124 | 346 |
| MS.gene53495.t1 | MTR_2g047838 | 70.950 | 179 | 43 | 2 | 1 | 176 | 1 | 173 | 7.67e-87 | 252 |
| MS.gene53495.t1 | MTR_4g098500 | 72.566 | 113 | 31 | 0 | 2 | 114 | 5 | 117 | 5.95e-57 | 175 |
| MS.gene53495.t1 | MTR_4g098500 | 72.566 | 113 | 31 | 0 | 2 | 114 | 31 | 143 | 4.02e-56 | 174 |
| MS.gene53495.t1 | MTR_4g088850 | 51.899 | 79 | 38 | 0 | 41 | 119 | 40 | 118 | 5.77e-24 | 91.7 |
| MS.gene53495.t1 | MTR_4g088850 | 42.105 | 76 | 43 | 1 | 3 | 78 | 41 | 115 | 4.18e-11 | 58.2 |
| MS.gene53495.t1 | MTR_4g088850 | 51.316 | 76 | 37 | 0 | 41 | 116 | 40 | 115 | 2.00e-22 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53495.t1 | AT4G20380 | 71.658 | 187 | 39 | 4 | 1 | 176 | 6 | 189 | 2.53e-75 | 224 |
| MS.gene53495.t1 | AT4G20380 | 71.658 | 187 | 39 | 4 | 1 | 176 | 6 | 189 | 2.53e-75 | 224 |
| MS.gene53495.t1 | AT4G20380 | 71.658 | 187 | 39 | 4 | 1 | 176 | 1 | 184 | 4.37e-75 | 223 |
| MS.gene53495.t1 | AT4G20380 | 71.658 | 187 | 39 | 4 | 1 | 176 | 1 | 184 | 4.37e-75 | 223 |
| MS.gene53495.t1 | AT4G20380 | 71.658 | 187 | 39 | 4 | 1 | 176 | 1 | 184 | 4.37e-75 | 223 |
| MS.gene53495.t1 | AT4G20380 | 71.658 | 187 | 39 | 4 | 1 | 176 | 1 | 184 | 4.37e-75 | 223 |
| MS.gene53495.t1 | AT4G20380 | 71.658 | 187 | 39 | 4 | 1 | 176 | 1 | 184 | 4.37e-75 | 223 |
| MS.gene53495.t1 | AT4G20380 | 62.911 | 213 | 39 | 4 | 1 | 176 | 1 | 210 | 6.02e-71 | 213 |
| MS.gene53495.t1 | AT1G32540 | 72.727 | 110 | 30 | 0 | 2 | 111 | 65 | 174 | 1.28e-55 | 174 |
| MS.gene53495.t1 | AT1G32540 | 72.727 | 110 | 30 | 0 | 2 | 111 | 32 | 141 | 1.27e-54 | 170 |
| MS.gene53495.t1 | AT1G32540 | 72.727 | 110 | 30 | 0 | 2 | 111 | 32 | 141 | 1.27e-54 | 170 |
| MS.gene53495.t1 | AT1G32540 | 74.074 | 108 | 28 | 0 | 2 | 109 | 32 | 139 | 4.58e-54 | 169 |
| MS.gene53495.t1 | AT4G20380 | 68.548 | 124 | 28 | 3 | 1 | 113 | 1 | 124 | 4.51e-50 | 157 |
| MS.gene53495.t1 | AT1G32540 | 76.389 | 72 | 17 | 0 | 2 | 73 | 65 | 136 | 3.16e-36 | 123 |
| MS.gene53495.t1 | AT1G32540 | 52.941 | 68 | 31 | 1 | 42 | 108 | 66 | 133 | 1.89e-13 | 64.7 |
| MS.gene53495.t1 | AT1G32540 | 76.389 | 72 | 17 | 0 | 2 | 73 | 32 | 103 | 1.42e-35 | 120 |
| MS.gene53495.t1 | AT1G32540 | 52.941 | 68 | 31 | 1 | 42 | 108 | 33 | 100 | 1.53e-13 | 63.9 |
| MS.gene53495.t1 | AT1G32540 | 76.389 | 72 | 17 | 0 | 2 | 73 | 32 | 103 | 1.42e-35 | 120 |
| MS.gene53495.t1 | AT1G32540 | 52.941 | 68 | 31 | 1 | 42 | 108 | 33 | 100 | 1.53e-13 | 63.9 |
| MS.gene53495.t1 | AT4G21610 | 52.500 | 80 | 38 | 0 | 40 | 119 | 57 | 136 | 4.55e-24 | 92.4 |
| MS.gene53495.t1 | AT4G21610 | 49.425 | 87 | 41 | 1 | 40 | 123 | 57 | 143 | 5.29e-22 | 87.0 |
Find 50 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTGTTTGGCTCTGAGATT+GGG | 0.218971 | 4.2:+12253993 | None:intergenic |
| CCACTGTTTGGCTCTGAGAT+TGG | 0.301892 | 4.2:+12253992 | None:intergenic |
| TGTTGATTCAAGTGGGAAAT+TGG | 0.322882 | 4.2:-12253950 | MS.gene53495:intron |
| ACAACACTCATGTATCCTTA+TGG | 0.360459 | 4.2:-12255394 | MS.gene53495:CDS |
| AATGGAAGGCTTCCAATTCC+TGG | 0.374088 | 4.2:-12254198 | MS.gene53495:CDS |
| AAGTAGCCCATGTCCCTTGC+GGG | 0.401008 | 4.2:-12255426 | MS.gene53495:CDS |
| GGCAGTTCCCGCAAGGGACA+TGG | 0.407023 | 4.2:+12255419 | None:intergenic |
| CAAACATTGGTTGCCCCTCT+AGG | 0.429678 | 4.2:+12257767 | None:intergenic |
| TGAGGTCTATGACCAGGAAT+TGG | 0.430540 | 4.2:+12254186 | None:intergenic |
| ATGTCCCTTGCGGGAACTGC+CGG | 0.445439 | 4.2:-12255417 | MS.gene53495:CDS |
| CCACTTGAATCAACAGACAT+TGG | 0.458263 | 4.2:+12253958 | None:intergenic |
| CAGGTGAGCAATGTTGTTGT+TGG | 0.459951 | 4.2:-12253813 | MS.gene53495:CDS |
| AAACATACCGTTGAAGTAGA+AGG | 0.466644 | 4.2:+12254138 | None:intergenic |
| AGGAATTGGAAGCCTTCCAT+TGG | 0.509054 | 4.2:+12254200 | None:intergenic |
| AAACATTGGTTGCCCCTCTA+GGG | 0.521552 | 4.2:+12257768 | None:intergenic |
| AACGTTACCTTCTACTTCAA+CGG | 0.522038 | 4.2:-12254145 | MS.gene53495:intron |
| GCATGTTGCTTTACCCTAGA+GGG | 0.526229 | 4.2:-12257781 | MS.gene53495:CDS |
| TTGACTGAAGGAGCTCCATA+AGG | 0.536562 | 4.2:+12255379 | None:intergenic |
| ACCTCACGGGACAACCGACT+CGG | 0.536569 | 4.2:-12254169 | MS.gene53495:CDS |
| AAGGATACATGAGTGTTGTC+CGG | 0.538194 | 4.2:+12255398 | None:intergenic |
| ACTGTTTGGCTCTGAGATTG+GGG | 0.544116 | 4.2:+12253994 | None:intergenic |
| GTTGTCCGGCAGTTCCCGCA+AGG | 0.550249 | 4.2:+12255412 | None:intergenic |
| AACTTGTGTGTAATGGTTGT+AGG | 0.557278 | 4.2:-12257805 | MS.gene53495:CDS |
| GCAGTTCCCGCAAGGGACAT+GGG | 0.560859 | 4.2:+12255420 | None:intergenic |
| CAGAGTCAACTTGTGTGTAA+TGG | 0.563559 | 4.2:-12257812 | MS.gene53495:CDS |
| AGAAGGTAACGTTCCCGAGT+CGG | 0.568975 | 4.2:+12254155 | None:intergenic |
| GATATGTCTCAACTATATTG+TGG | 0.572327 | 4.2:-12257547 | MS.gene53495:CDS |
| CCAATGTCTGTTGATTCAAG+TGG | 0.574429 | 4.2:-12253958 | MS.gene53495:CDS |
| GTCCCGTGAGGTCTATGACC+AGG | 0.577307 | 4.2:+12254180 | None:intergenic |
| CCTCACGGGACAACCGACTC+GGG | 0.587267 | 4.2:-12254168 | MS.gene53495:CDS |
| AACTATATTGTGGAGGCTGT+AGG | 0.590469 | 4.2:-12257537 | MS.gene53495:CDS |
| ATTCCTGGTCATAGACCTCA+CGG | 0.590721 | 4.2:-12254183 | MS.gene53495:CDS |
| TTGTCCGGCAGTTCCCGCAA+GGG | 0.594632 | 4.2:+12255413 | None:intergenic |
| ATTACCTCTGTTCCTCCACC+TGG | 0.595203 | 4.2:-12257725 | MS.gene53495:intron |
| CATACTGTAAACCTTGCTCC+AGG | 0.599148 | 4.2:-12257463 | MS.gene53495:intron |
| AATATACATTACCTGGAGCA+AGG | 0.599284 | 4.2:+12257452 | None:intergenic |
| CAATGTCTGTTGATTCAAGT+GGG | 0.600952 | 4.2:-12253957 | MS.gene53495:CDS |
| CGTTGGAGCTTACCAGGTGG+AGG | 0.603157 | 4.2:+12257713 | None:intergenic |
| GCACAATGCACAACAAACAT+TGG | 0.623040 | 4.2:+12257754 | None:intergenic |
| ATCTCAGAGCCAAACAGTGG+TGG | 0.625723 | 4.2:-12253989 | MS.gene53495:CDS |
| AGCATGTTGCTTTACCCTAG+AGG | 0.627744 | 4.2:-12257782 | MS.gene53495:CDS |
| CAAACAGCACATTTGACTGA+AGG | 0.639168 | 4.2:+12255367 | None:intergenic |
| CCCGAGTCGGTTGTCCCGTG+AGG | 0.642543 | 4.2:+12254168 | None:intergenic |
| ATGTCTCAACTATATTGTGG+AGG | 0.644670 | 4.2:-12257544 | MS.gene53495:CDS |
| CAAGTAGCCCATGTCCCTTG+CGG | 0.646539 | 4.2:-12255427 | MS.gene53495:CDS |
| CATGTTGCTTTACCCTAGAG+GGG | 0.647362 | 4.2:-12257780 | MS.gene53495:CDS |
| CTTACCAGGTGGAGGAACAG+AGG | 0.665101 | 4.2:+12257721 | None:intergenic |
| TTCCTGGTCATAGACCTCAC+GGG | 0.671842 | 4.2:-12254182 | MS.gene53495:CDS |
| CCAATCTCAGAGCCAAACAG+TGG | 0.689166 | 4.2:-12253992 | MS.gene53495:CDS |
| ACATTGTTAATGTACACACG+CGG | 0.795848 | 4.2:-12257514 | MS.gene53495:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAGAAAAAATAATACTT+TGG | - | chr4.2:12257191-12257210 | MS.gene53495:intron | 10.0% |
| !!! | TAAAATTTAAAATGTTATAC+GGG | - | chr4.2:12254939-12254958 | MS.gene53495:intron | 10.0% |
| !!! | TTCAACAAGATTTTTTTTTT+AGG | + | chr4.2:12255615-12255634 | None:intergenic | 15.0% |
| !!! | TTTTTTTCTAGTTTTGTTTT+TGG | - | chr4.2:12257495-12257514 | MS.gene53495:CDS | 15.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | - | chr4.2:12257157-12257176 | MS.gene53495:intron | 20.0% |
| !! | AACATGTAGTTGTTTATAAA+TGG | + | chr4.2:12255772-12255791 | None:intergenic | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | + | chr4.2:12257158-12257177 | None:intergenic | 20.0% |
| !! | AGTGTTTCATTATTTAATCT+TGG | - | chr4.2:12255927-12255946 | MS.gene53495:intron | 20.0% |
| !! | GAAATTGAAGATTATTACAA+TGG | + | chr4.2:12254764-12254783 | None:intergenic | 20.0% |
| !! | GTAACATAGTATTAATTGAA+GGG | - | chr4.2:12257221-12257240 | MS.gene53495:intron | 20.0% |
| !! | TGTAAAATGGAATTCTTTAT+TGG | + | chr4.2:12256082-12256101 | None:intergenic | 20.0% |
| !! | TGTAACATAGTATTAATTGA+AGG | - | chr4.2:12257220-12257239 | MS.gene53495:intron | 20.0% |
| !!! | AGACTTGTTTAAAATGAATT+TGG | - | chr4.2:12257763-12257782 | MS.gene53495:CDS | 20.0% |
| !!! | ATATTTGCATAATCATTTTC+TGG | - | chr4.2:12255835-12255854 | MS.gene53495:intron | 20.0% |
| !!! | CATTTTGAAACAGATTTTTT+TGG | - | chr4.2:12257295-12257314 | MS.gene53495:intron | 20.0% |
| !!! | CTAAAACAGTTATGTTATTT+AGG | - | chr4.2:12254704-12254723 | MS.gene53495:intron | 20.0% |
| !!! | TAGCTAATGTTTTGTAAATT+TGG | - | chr4.2:12255363-12255382 | MS.gene53495:CDS | 20.0% |
| !!! | TATTTGCATAATCATTTTCT+GGG | - | chr4.2:12255836-12255855 | MS.gene53495:intron | 20.0% |
| !!! | TCACACATAGATTATTTTTT+TGG | - | chr4.2:12256732-12256751 | MS.gene53495:intron | 20.0% |
| !!! | TTTAATCTGCGTTTTTAAAT+AGG | - | chr4.2:12256702-12256721 | MS.gene53495:intron | 20.0% |
| !!! | TTTTTTTTAGGAAGAATTGA+TGG | + | chr4.2:12255603-12255622 | None:intergenic | 20.0% |
| ! | AAAAGCAAATATACATTACC+TGG | + | chr4.2:12254164-12254183 | None:intergenic | 25.0% |
| ! | AAACAAACCAATAGTTGATT+AGG | + | chr4.2:12257167-12257186 | None:intergenic | 25.0% |
| ! | AAACAACTACATGTTAATCT+GGG | - | chr4.2:12255777-12255796 | MS.gene53495:intron | 25.0% |
| ! | AACATTGAACACATCTTAAA+GGG | - | chr4.2:12256958-12256977 | MS.gene53495:intron | 25.0% |
| ! | AATTTGGAGACAAAATTTCT+TGG | - | chr4.2:12255379-12255398 | MS.gene53495:CDS | 25.0% |
| ! | ATTATTACAATGGAACACTA+GGG | + | chr4.2:12254754-12254773 | None:intergenic | 25.0% |
| ! | CAATAAAAATAATGACAACC+TGG | - | chr4.2:12255412-12255431 | MS.gene53495:CDS | 25.0% |
| ! | CCAACTTAAAAGAATAAGAT+TGG | - | chr4.2:12256878-12256897 | MS.gene53495:intron | 25.0% |
| ! | CTTGAAATCTGATTAGAAAA+AGG | - | chr4.2:12256449-12256468 | MS.gene53495:intron | 25.0% |
| ! | GAATAAATCACACTGTAAAA+TGG | + | chr4.2:12256095-12256114 | None:intergenic | 25.0% |
| ! | GAGATTTATTTACGCTAAAA+AGG | - | chr4.2:12254996-12255015 | MS.gene53495:intron | 25.0% |
| ! | GAGATTTGAAGAGTAATAAA+AGG | + | chr4.2:12255980-12255999 | None:intergenic | 25.0% |
| ! | TAAACAACTACATGTTAATC+TGG | - | chr4.2:12255776-12255795 | MS.gene53495:intron | 25.0% |
| ! | TAGTCTTTAATTCTTGTATG+TGG | + | chr4.2:12256392-12256411 | None:intergenic | 25.0% |
| ! | TGAGAACATTAGAGTTATAA+TGG | - | chr4.2:12255049-12255068 | MS.gene53495:intron | 25.0% |
| ! | TTATTTACGCTAAAAAGGAT+GGG | - | chr4.2:12255001-12255020 | MS.gene53495:intron | 25.0% |
| ! | TTGAACAAAGCAAGAAAATA+AGG | + | chr4.2:12254905-12254924 | None:intergenic | 25.0% |
| ! | TTGCTAAATAAGATTGCTAA+TGG | - | chr4.2:12254793-12254812 | MS.gene53495:intron | 25.0% |
| ! | TTTATTTACGCTAAAAAGGA+TGG | - | chr4.2:12255000-12255019 | MS.gene53495:intron | 25.0% |
| !! | AGTCACTGAATAATTTCTTT+TGG | - | chr4.2:12254829-12254848 | MS.gene53495:intron | 25.0% |
| !! | CTACAGAATTTTGTTAATCT+GGG | - | chr4.2:12256296-12256315 | MS.gene53495:intron | 25.0% |
| !! | TCTACAGAATTTTGTTAATC+TGG | - | chr4.2:12256295-12256314 | MS.gene53495:intron | 25.0% |
| !!! | CCAATCTTATTCTTTTAAGT+TGG | + | chr4.2:12256881-12256900 | None:intergenic | 25.0% |
| !!! | TGTATGTTTTGAACTGTATT+TGG | - | chr4.2:12254415-12254434 | MS.gene53495:intron | 25.0% |
| !!! | TTCAAAATGAATGTCACTTT+CGG | + | chr4.2:12257284-12257303 | None:intergenic | 25.0% |
| AAATAATGAAACACTGACCT+TGG | + | chr4.2:12255922-12255941 | None:intergenic | 30.0% | |
| AAGAATAAGATTGGAGTCTA+AGG | - | chr4.2:12256887-12256906 | MS.gene53495:intron | 30.0% | |
| AAGTAGCTACAGAATTAGTT+AGG | + | chr4.2:12256625-12256644 | None:intergenic | 30.0% | |
| AAGTGAAGAATCAACACATT+CGG | + | chr4.2:12255642-12255661 | None:intergenic | 30.0% | |
| AATCAAAGAAGACTGAATCA+GGG | + | chr4.2:12254866-12254885 | None:intergenic | 30.0% | |
| CAACATTGAACACATCTTAA+AGG | - | chr4.2:12256957-12256976 | MS.gene53495:intron | 30.0% | |
| CAAGCTTATCAAGAATAAGT+AGG | + | chr4.2:12256817-12256836 | None:intergenic | 30.0% | |
| CAGTATGAAAAAATCAACTC+AGG | + | chr4.2:12257365-12257384 | None:intergenic | 30.0% | |
| GATATGTCTCAACTATATTG+TGG | - | chr4.2:12254059-12254078 | MS.gene53495:intron | 30.0% | |
| GATGTACGAACATTACATAT+AGG | + | chr4.2:12253950-12253969 | None:intergenic | 30.0% | |
| GATTATTACAATGGAACACT+AGG | + | chr4.2:12254755-12254774 | None:intergenic | 30.0% | |
| GTGGTTTAGTATTAGTTAAG+CGG | - | chr4.2:12254211-12254230 | MS.gene53495:intron | 30.0% | |
| TAAAGACTAGTATGAGAGAA+AGG | - | chr4.2:12256403-12256422 | MS.gene53495:intron | 30.0% | |
| TCTTCAAATCTCTATTGTAG+AGG | - | chr4.2:12255988-12256007 | MS.gene53495:intron | 30.0% | |
| TGGTGATTAATAGCATAGAA+AGG | - | chr4.2:12257515-12257534 | MS.gene53495:CDS | 30.0% | |
| TGGTTATAGTAGTAAAGGAA+GGG | + | chr4.2:12256602-12256621 | None:intergenic | 30.0% | |
| TGGTTTAGTATTAGTTAAGC+GGG | - | chr4.2:12254212-12254231 | MS.gene53495:intron | 30.0% | |
| TGGTTTATTTATGTTGGTCA+CGG | - | chr4.2:12254681-12254700 | MS.gene53495:intron | 30.0% | |
| TGTGAGTGGTTTATTTATGT+TGG | - | chr4.2:12254675-12254694 | MS.gene53495:intron | 30.0% | |
| TTAGAGTTATAATGGCTAAG+TGG | - | chr4.2:12255057-12255076 | MS.gene53495:intron | 30.0% | |
| TTAGGTGGTTATAGTAGTAA+AGG | + | chr4.2:12256607-12256626 | None:intergenic | 30.0% | |
| TTAGGTGTTCTTACTTGTAA+TGG | - | chr4.2:12254722-12254741 | MS.gene53495:intron | 30.0% | |
| TTATAATGGCTAAGTGGTTA+TGG | - | chr4.2:12255063-12255082 | MS.gene53495:intron | 30.0% | |
| TTGAACTGTATTTGGATAAG+AGG | - | chr4.2:12254423-12254442 | MS.gene53495:intron | 30.0% | |
| ! | AAAATGCTTTTCCAAAAAGG+TGG | - | chr4.2:12255207-12255226 | MS.gene53495:intron | 30.0% |
| ! | ATGATGTTCTTTTGTATGCA+TGG | - | chr4.2:12254523-12254542 | MS.gene53495:intron | 30.0% |
| ! | CATTTTAAGCTTTGCAGAAA+AGG | + | chr4.2:12255103-12255122 | None:intergenic | 30.0% |
| ! | GCTAAAATGCTTTTCCAAAA+AGG | - | chr4.2:12255204-12255223 | MS.gene53495:intron | 30.0% |
| ! | TACATGTTAATCTGGGATTA+AGG | - | chr4.2:12255784-12255803 | MS.gene53495:intron | 30.0% |
| ! | TCTGCGTTTTTAAATAGGAA+AGG | - | chr4.2:12256707-12256726 | MS.gene53495:intron | 30.0% |
| !! | GATTCAGTTAATTTGTAGGA+AGG | + | chr4.2:12256579-12256598 | None:intergenic | 30.0% |
| !! | TGAGACTCTAAGTTGATATT+AGG | - | chr4.2:12254004-12254023 | MS.gene53495:intron | 30.0% |
| !! | TTACTTTGATTCCACTTTTG+AGG | - | chr4.2:12254578-12254597 | MS.gene53495:intron | 30.0% |
| !! | TTTTTAGGAAGAATTGATGG+AGG | + | chr4.2:12255600-12255619 | None:intergenic | 30.0% |
| AAACATACCGTTGAAGTAGA+AGG | + | chr4.2:12257471-12257490 | None:intergenic | 35.0% | |
| AACGTTACCTTCTACTTCAA+CGG | - | chr4.2:12257461-12257480 | MS.gene53495:intron | 35.0% | |
| AACTTGTGTGTAATGGTTGT+AGG | - | chr4.2:12253801-12253820 | MS.gene53495:CDS | 35.0% | |
| AATAGAATCAGTTCCTTGAG+TGG | + | chr4.2:12255563-12255582 | None:intergenic | 35.0% | |
| AATATACATTACCTGGAGCA+AGG | + | chr4.2:12254157-12254176 | None:intergenic | 35.0% | |
| ACAACACTCATGTATCCTTA+TGG | - | chr4.2:12256212-12256231 | MS.gene53495:intron | 35.0% | |
| ACATGCCTGTTATCAGATAT+TGG | - | chr4.2:12256852-12256871 | MS.gene53495:intron | 35.0% | |
| ACATTGTTAATGTACACACG+CGG | - | chr4.2:12254092-12254111 | MS.gene53495:intron | 35.0% | |
| ATAACAGGCATGTGATAACT+TGG | + | chr4.2:12256845-12256864 | None:intergenic | 35.0% | |
| ATAGTACTCATCAAGACGAA+CGG | + | chr4.2:12255956-12255975 | None:intergenic | 35.0% | |
| ATGAAATTTCATTCCCGTTG+AGG | - | chr4.2:12257006-12257025 | MS.gene53495:intron | 35.0% | |
| ATGTCTCAACTATATTGTGG+AGG | - | chr4.2:12254062-12254081 | MS.gene53495:intron | 35.0% | |
| ATTGCACACAGATTAAGGAA+TGG | - | chr4.2:12257101-12257120 | MS.gene53495:intron | 35.0% | |
| ATTGGACATCTACAAAAGAC+AGG | + | chr4.2:12257391-12257410 | None:intergenic | 35.0% | |
| CACAACATCAACTTGATCAT+TGG | + | chr4.2:12254652-12254671 | None:intergenic | 35.0% | |
| CAGCACCTCAGTTATAAAAA+AGG | + | chr4.2:12256508-12256527 | None:intergenic | 35.0% | |
| CATCATAATCTACAAACTGC+AGG | + | chr4.2:12254509-12254528 | None:intergenic | 35.0% | |
| CATGCCTGTTATCAGATATT+GGG | - | chr4.2:12256853-12256872 | MS.gene53495:intron | 35.0% | |
| CATTGCTTGATCATGGAATA+TGG | - | chr4.2:12254301-12254320 | MS.gene53495:intron | 35.0% | |
| GAATCAAAGAAGACTGAATC+AGG | + | chr4.2:12254867-12254886 | None:intergenic | 35.0% | |
| GATTAGAAAAAGGATCCCAA+GGG | - | chr4.2:12256459-12256478 | MS.gene53495:intron | 35.0% | |
| GGAGATACATTTAAGTCTTC+TGG | - | chr4.2:12256753-12256772 | MS.gene53495:intron | 35.0% | |
| GGTTATAGTAGTAAAGGAAG+GGG | + | chr4.2:12256601-12256620 | None:intergenic | 35.0% | |
| GTGGTTATAGTAGTAAAGGA+AGG | + | chr4.2:12256603-12256622 | None:intergenic | 35.0% | |
| TAAGCTTTGCAGAAAAGGTT+AGG | + | chr4.2:12255098-12255117 | None:intergenic | 35.0% | |
| TACAACAGACAAAAGCTCAA+AGG | + | chr4.2:12257032-12257051 | None:intergenic | 35.0% | |
| TAGCATAGAAAGGATGATGT+TGG | - | chr4.2:12257525-12257544 | MS.gene53495:CDS | 35.0% | |
| TAGCTACAGAATTAGTTAGG+TGG | + | chr4.2:12256622-12256641 | None:intergenic | 35.0% | |
| TATTGCTTGCATTTAGTCCA+AGG | - | chr4.2:12255902-12255921 | MS.gene53495:intron | 35.0% | |
| TGATTAGAAAAAGGATCCCA+AGG | - | chr4.2:12256458-12256477 | MS.gene53495:intron | 35.0% | |
| TGTATTTGGATAAGAGGCAA+TGG | - | chr4.2:12254429-12254448 | MS.gene53495:intron | 35.0% | |
| TGTGAAAGGTGAATGTATGT+TGG | - | chr4.2:12255248-12255267 | MS.gene53495:intron | 35.0% | |
| TTCCTTAATCTGTGTGCAAT+TGG | + | chr4.2:12257101-12257120 | None:intergenic | 35.0% | |
| TTTAATAACGAGAACAGCGT+TGG | + | chr4.2:12253913-12253932 | None:intergenic | 35.0% | |
| TTTAGTATTAGTTAAGCGGG+TGG | - | chr4.2:12254215-12254234 | MS.gene53495:intron | 35.0% | |
| TTTATGAGCCTTGGTAAACA+CGG | - | chr4.2:12254615-12254634 | MS.gene53495:intron | 35.0% | |
| ! | GAGCTTTTGTCTGTTGTAAA+TGG | - | chr4.2:12257034-12257053 | MS.gene53495:intron | 35.0% |
| ! | TAGTGAAAGGTTTGGTTGTT+TGG | - | chr4.2:12254460-12254479 | MS.gene53495:intron | 35.0% |
| ! | TCTTTCTGAACTGTTAGCTT+TGG | + | chr4.2:12256540-12256559 | None:intergenic | 35.0% |
| ! | TGTCTTTTGTAGATGTCCAA+TGG | - | chr4.2:12257390-12257409 | MS.gene53495:intron | 35.0% |
| ! | TTTTGTAGATGTCCAATGGA+AGG | - | chr4.2:12257394-12257413 | MS.gene53495:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4.2:12257321-12257340 | MS.gene53495:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+TGG | + | chr4.2:12257340-12257321 | None:intergenic | 35.0% |
| !! | AGGGGATTCAGTTAATTTGT+AGG | + | chr4.2:12256583-12256602 | None:intergenic | 35.0% |
| !! | CAATGTCTGTTGATTCAAGT+GGG | - | chr4.2:12257649-12257668 | MS.gene53495:intron | 35.0% |
| !! | CATCTCTTTGAAATGAAGTC+TGG | - | chr4.2:12255674-12255693 | MS.gene53495:intron | 35.0% |
| !! | CTTTCTGAACTGTTAGCTTT+GGG | + | chr4.2:12256539-12256558 | None:intergenic | 35.0% |
| !! | TCAGTTAATTTGTAGGAAGG+CGG | + | chr4.2:12256576-12256595 | None:intergenic | 35.0% |
| !! | TGTTGATTCAAGTGGGAAAT+TGG | - | chr4.2:12257656-12257675 | MS.gene53495:intron | 35.0% |
| !! | TTTCTGAACTGTTAGCTTTG+GGG | + | chr4.2:12256538-12256557 | None:intergenic | 35.0% |
| !!! | GACACTCATTTTGAAATGGA+GGG | + | chr4.2:12257071-12257090 | None:intergenic | 35.0% |
| AAAATCCCGTCTTATGTTCC+CGG | - | chr4.2:12255441-12255460 | MS.gene53495:intron | 40.0% | |
| AACTATATTGTGGAGGCTGT+AGG | - | chr4.2:12254069-12254088 | MS.gene53495:intron | 40.0% | |
| ACGACAAATGACCTCAAAAG+TGG | + | chr4.2:12254592-12254611 | None:intergenic | 40.0% | |
| AGCCAATTGCACACAGATTA+AGG | - | chr4.2:12257096-12257115 | MS.gene53495:intron | 40.0% | |
| ATTTACTGCACGATTGGTGT+TGG | - | chr4.2:12255128-12255147 | MS.gene53495:intron | 40.0% | |
| CAAACAGCACATTTGACTGA+AGG | + | chr4.2:12256242-12256261 | None:intergenic | 40.0% | |
| CAGAGTCAACTTGTGTGTAA+TGG | - | chr4.2:12253794-12253813 | MS.gene53495:CDS | 40.0% | |
| CAGTTCAAAACATACACTCG+AGG | + | chr4.2:12254411-12254430 | None:intergenic | 40.0% | |
| CATTCACCTTTCACAAGCAT+AGG | + | chr4.2:12255243-12255262 | None:intergenic | 40.0% | |
| CATTTCAAAGAGATGACGTG+AGG | + | chr4.2:12255669-12255688 | None:intergenic | 40.0% | |
| CCAATAACTGGAATGAGGTT+GGG | - | chr4.2:12255177-12255196 | MS.gene53495:intron | 40.0% | |
| CCACTTGAATCAACAGACAT+TGG | + | chr4.2:12257651-12257670 | None:intergenic | 40.0% | |
| GAAGCTATTTACTGCACGAT+TGG | - | chr4.2:12255122-12255141 | MS.gene53495:intron | 40.0% | |
| GAGAATCCAAAGTTTCCCTA+GGG | + | chr4.2:12256934-12256953 | None:intergenic | 40.0% | |
| GCACAATGCACAACAAACAT+TGG | + | chr4.2:12253855-12253874 | None:intergenic | 40.0% | |
| GGATCCCAATATCTGATAAC+AGG | + | chr4.2:12256860-12256879 | None:intergenic | 40.0% | |
| TAATCCGTACACGAGGATTT+CGG | + | chr4.2:12254345-12254364 | None:intergenic | 40.0% | |
| TATATGCCCTAGGGAAACTT+TGG | - | chr4.2:12256925-12256944 | MS.gene53495:intron | 40.0% | |
| TCCAATAACTGGAATGAGGT+TGG | - | chr4.2:12255176-12255195 | MS.gene53495:intron | 40.0% | |
| TGAGAATCCAAAGTTTCCCT+AGG | + | chr4.2:12256935-12256954 | None:intergenic | 40.0% | |
| TTGGATAAGAGGCAATGGAA+GGG | - | chr4.2:12254434-12254453 | MS.gene53495:intron | 40.0% | |
| TTTCCCTAGGGCATATAAGT+CGG | + | chr4.2:12256922-12256941 | None:intergenic | 40.0% | |
| TTTGCACACTACGAGATGTT+TGG | - | chr4.2:12256032-12256051 | MS.gene53495:intron | 40.0% | |
| TTTGCTGCATTGCTTGATCA+TGG | - | chr4.2:12254294-12254313 | MS.gene53495:intron | 40.0% | |
| TTTGGATAAGAGGCAATGGA+AGG | - | chr4.2:12254433-12254452 | MS.gene53495:intron | 40.0% | |
| ! | AAGGATACATGAGTGTTGTC+CGG | + | chr4.2:12256211-12256230 | None:intergenic | 40.0% |
| ! | AGACGGGATTTTATAGTACC+AGG | + | chr4.2:12255433-12255452 | None:intergenic | 40.0% |
| ! | ATACGGGATTCCTTTTGCAT+GGG | - | chr4.2:12254955-12254974 | MS.gene53495:intron | 40.0% |
| ! | GATTTTCTACCACCACTGTT+TGG | + | chr4.2:12257629-12257648 | None:intergenic | 40.0% |
| ! | TATACGGGATTCCTTTTGCA+TGG | - | chr4.2:12254954-12254973 | MS.gene53495:intron | 40.0% |
| ! | TCTTATTTAGCAACAGCGTC+TGG | + | chr4.2:12254786-12254805 | None:intergenic | 40.0% |
| ! | TTGATGTTGTGACTTGTGAG+TGG | - | chr4.2:12254661-12254680 | MS.gene53495:intron | 40.0% |
| ! | TTTACTGCACGATTGGTGTT+GGG | - | chr4.2:12255129-12255148 | MS.gene53495:intron | 40.0% |
| !! | CCAATGTCTGTTGATTCAAG+TGG | - | chr4.2:12257648-12257667 | MS.gene53495:intron | 40.0% |
| !! | TGTCGTGTTTTTATGAGCCT+TGG | - | chr4.2:12254606-12254625 | MS.gene53495:intron | 40.0% |
| !! | TTAATTTGTAGGAAGGCGGA+AGG | + | chr4.2:12256572-12256591 | None:intergenic | 40.0% |
| !!! | CGACACTCATTTTGAAATGG+AGG | + | chr4.2:12257072-12257091 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr4.2:12257325-12257344 | MS.gene53495:intron | 40.0% |
| !!! | GGCAGCCTTTTTTATAACTG+AGG | - | chr4.2:12256500-12256519 | MS.gene53495:intron | 40.0% |
| AAAAGCTCAAAGGCCTCAAC+GGG | + | chr4.2:12257022-12257041 | None:intergenic | 45.0% | |
| AAAAGGCTGCCCTTTGTTGA+AGG | + | chr4.2:12256491-12256510 | None:intergenic | 45.0% | |
| AAACCCGACTTATATGCCCT+AGG | - | chr4.2:12256915-12256934 | MS.gene53495:intron | 45.0% | |
| AAAGGATGGGTGCTTAGTCT+TGG | - | chr4.2:12255014-12255033 | MS.gene53495:intron | 45.0% | |
| AAAGGCTGCCCTTTGTTGAA+GGG | + | chr4.2:12256490-12256509 | None:intergenic | 45.0% | |
| AAATCCCGTCTTATGTTCCC+GGG | - | chr4.2:12255442-12255461 | MS.gene53495:intron | 45.0% | |
| AACCCGACTTATATGCCCTA+GGG | - | chr4.2:12256916-12256935 | MS.gene53495:intron | 45.0% | |
| AATCAGTTCCTTGAGTGGTG+TGG | + | chr4.2:12255558-12255577 | None:intergenic | 45.0% | |
| AATGACCTTAATGTACCCCC+TGG | + | chr4.2:12254368-12254387 | None:intergenic | 45.0% | |
| AATGGAAGGCTTCCAATTCC+TGG | - | chr4.2:12257408-12257427 | MS.gene53495:intron | 45.0% | |
| ACAATGGAACACTAGGGAAG+AGG | + | chr4.2:12254748-12254767 | None:intergenic | 45.0% | |
| AGAGAAGCAGTCAAATGCAG+TGG | + | chr4.2:12257723-12257742 | None:intergenic | 45.0% | |
| AGGAATTGGAAGCCTTCCAT+TGG | + | chr4.2:12257409-12257428 | None:intergenic | 45.0% | |
| ATCAGATTCCACACCACTCA+AGG | - | chr4.2:12255547-12255566 | MS.gene53495:intron | 45.0% | |
| ATTCCAGTTATTGGAGCCAG+TGG | + | chr4.2:12255171-12255190 | None:intergenic | 45.0% | |
| ATTCCTGGTCATAGACCTCA+CGG | - | chr4.2:12257423-12257442 | MS.gene53495:intron | 45.0% | |
| CAAAAGCTCAAAGGCCTCAA+CGG | + | chr4.2:12257023-12257042 | None:intergenic | 45.0% | |
| CAGGTGAGCAATGTTGTTGT+TGG | - | chr4.2:12257793-12257812 | MS.gene53495:CDS | 45.0% | |
| CATACTGTAAACCTTGCTCC+AGG | - | chr4.2:12254143-12254162 | MS.gene53495:intron | 45.0% | |
| CCCAACCTCATTCCAGTTAT+TGG | + | chr4.2:12255180-12255199 | None:intergenic | 45.0% | |
| GCTTGACAGATGAAGCTTAG+TGG | - | chr4.2:12254192-12254211 | MS.gene53495:CDS | 45.0% | |
| GGTGAATGTATGTTGGAGAG+TGG | - | chr4.2:12255255-12255274 | MS.gene53495:intron | 45.0% | |
| TAGTTAAGCGGGTGGCATAT+TGG | - | chr4.2:12254223-12254242 | MS.gene53495:intron | 45.0% | |
| TGAGGTCTATGACCAGGAAT+TGG | + | chr4.2:12257423-12257442 | None:intergenic | 45.0% | |
| TGGATAAGAGGCAATGGAAG+GGG | - | chr4.2:12254435-12254454 | MS.gene53495:intron | 45.0% | |
| TGGCTCCAATAACTGGAATG+AGG | - | chr4.2:12255172-12255191 | MS.gene53495:intron | 45.0% | |
| TGTTGAAGGGGAAAACCCTT+GGG | + | chr4.2:12256477-12256496 | None:intergenic | 45.0% | |
| TTCCAGTTATTGGAGCCAGT+GGG | + | chr4.2:12255170-12255189 | None:intergenic | 45.0% | |
| TTCCCTAGGGCATATAAGTC+GGG | + | chr4.2:12256921-12256940 | None:intergenic | 45.0% | |
| TTGACTGAAGGAGCTCCATA+AGG | + | chr4.2:12256230-12256249 | None:intergenic | 45.0% | |
| TTGTTGAAGGGGAAAACCCT+TGG | + | chr4.2:12256478-12256497 | None:intergenic | 45.0% | |
| ! | AAACATTGGTTGCCCCTCTA+GGG | + | chr4.2:12253841-12253860 | None:intergenic | 45.0% |
| ! | AAGGGGGTTAGTGAAAGGTT+TGG | - | chr4.2:12254452-12254471 | MS.gene53495:intron | 45.0% |
| ! | AATGGAAGGGGGTTAGTGAA+AGG | - | chr4.2:12254447-12254466 | MS.gene53495:intron | 45.0% |
| ! | AGGGTTTTCCCCTTCAACAA+AGG | - | chr4.2:12256478-12256497 | MS.gene53495:intron | 45.0% |
| ! | GATTACCAGGGGGTACATTA+AGG | - | chr4.2:12254360-12254379 | MS.gene53495:intron | 45.0% |
| ! | GGGTTTTCCCCTTCAACAAA+GGG | - | chr4.2:12256479-12256498 | MS.gene53495:intron | 45.0% |
| ! | TACGGGATTCCTTTTGCATG+GGG | - | chr4.2:12254956-12254975 | MS.gene53495:intron | 45.0% |
| !! | ACTGTTTGGCTCTGAGATTG+GGG | + | chr4.2:12257615-12257634 | None:intergenic | 45.0% |
| !! | AGCATGTTGCTTTACCCTAG+AGG | - | chr4.2:12253824-12253843 | MS.gene53495:intron | 45.0% |
| !! | CACTGTTTGGCTCTGAGATT+GGG | + | chr4.2:12257616-12257635 | None:intergenic | 45.0% |
| !! | CATGTTGCTTTACCCTAGAG+GGG | - | chr4.2:12253826-12253845 | MS.gene53495:intron | 45.0% |
| !! | GCATGTTGCTTTACCCTAGA+GGG | - | chr4.2:12253825-12253844 | MS.gene53495:intron | 45.0% |
| !! | GGTGCTTAGTCTTGGTAAGT+TGG | - | chr4.2:12255022-12255041 | MS.gene53495:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4.2:12257324-12257343 | MS.gene53495:intron | 45.0% |
| !!! | ATAAAATTTAAAATGTTATA+CGG | - | chr4.2:12254938-12254957 | MS.gene53495:intron | 5.0% |
| AAATTTGTCCGCCTCTTCCC+GGG | + | chr4.2:12255462-12255481 | None:intergenic | 50.0% | |
| AAGGCTGCCCTTTGTTGAAG+GGG | + | chr4.2:12256489-12256508 | None:intergenic | 50.0% | |
| AGAAGGTAACGTTCCCGAGT+CGG | + | chr4.2:12257454-12257473 | None:intergenic | 50.0% | |
| ATCTCAGAGCCAAACAGTGG+TGG | - | chr4.2:12257617-12257636 | MS.gene53495:intron | 50.0% | |
| ATGGGGGTCATTTGGCTACT+CGG | - | chr4.2:12254973-12254992 | MS.gene53495:intron | 50.0% | |
| ATTACCTCTGTTCCTCCACC+TGG | - | chr4.2:12253881-12253900 | MS.gene53495:intron | 50.0% | |
| ATTTGTAGGAAGGCGGAAGG+AGG | + | chr4.2:12256569-12256588 | None:intergenic | 50.0% | |
| CAAATTTGTCCGCCTCTTCC+CGG | + | chr4.2:12255463-12255482 | None:intergenic | 50.0% | |
| CAGCCAAACCGTGTTTACCA+AGG | + | chr4.2:12254626-12254645 | None:intergenic | 50.0% | |
| CCAAATGACCCCCATGCAAA+AGG | + | chr4.2:12254968-12254987 | None:intergenic | 50.0% | |
| CCAATCTCAGAGCCAAACAG+TGG | - | chr4.2:12257614-12257633 | MS.gene53495:intron | 50.0% | |
| CCTTTCACAAGCATAGGAGC+CGG | + | chr4.2:12255237-12255256 | None:intergenic | 50.0% | |
| CGTTCCGAAATCCTCGTGTA+CGG | - | chr4.2:12254338-12254357 | MS.gene53495:intron | 50.0% | |
| CTCTTCCCGGGAACATAAGA+CGG | + | chr4.2:12255450-12255469 | None:intergenic | 50.0% | |
| CTTTCACAAGCATAGGAGCC+GGG | + | chr4.2:12255236-12255255 | None:intergenic | 50.0% | |
| GAGCCTTGGTAAACACGGTT+TGG | - | chr4.2:12254620-12254639 | MS.gene53495:intron | 50.0% | |
| GGATAAGAGGCAATGGAAGG+GGG | - | chr4.2:12254436-12254455 | MS.gene53495:intron | 50.0% | |
| GGCATATAAGTCGGGTTTGC+AGG | + | chr4.2:12256913-12256932 | None:intergenic | 50.0% | |
| TACTGATGTTCCTGCAGGGA+TGG | - | chr4.2:12254037-12254056 | MS.gene53495:intron | 50.0% | |
| TAGGACGACGTAGACACGAA+TGG | + | chr4.2:12256798-12256817 | None:intergenic | 50.0% | |
| TCCCTGCAGGAACATCAGTA+CGG | + | chr4.2:12254037-12254056 | None:intergenic | 50.0% | |
| TCTTCCCGGGAACATAAGAC+GGG | + | chr4.2:12255449-12255468 | None:intergenic | 50.0% | |
| TGAGACATATCCATCCCTGC+AGG | + | chr4.2:12254050-12254069 | None:intergenic | 50.0% | |
| TTCCTGGTCATAGACCTCAC+GGG | - | chr4.2:12257424-12257443 | MS.gene53495:intron | 50.0% | |
| TTTCCAAAAAGGTGGCAGCC+CGG | - | chr4.2:12255215-12255234 | MS.gene53495:intron | 50.0% | |
| TTTGTAGGAAGGCGGAAGGA+GGG | + | chr4.2:12256568-12256587 | None:intergenic | 50.0% | |
| ! | ACCGTACTGATGTTCCTGCA+GGG | - | chr4.2:12254033-12254052 | MS.gene53495:intron | 50.0% |
| ! | ACGGGATTCCTTTTGCATGG+GGG | - | chr4.2:12254957-12254976 | MS.gene53495:intron | 50.0% |
| ! | ATCCTCGTGTACGGATTACC+AGG | - | chr4.2:12254347-12254366 | MS.gene53495:intron | 50.0% |
| ! | CAAACATTGGTTGCCCCTCT+AGG | + | chr4.2:12253842-12253861 | None:intergenic | 50.0% |
| ! | CCTTTTGCATGGGGGTCATT+TGG | - | chr4.2:12254965-12254984 | MS.gene53495:intron | 50.0% |
| ! | TACCGTACTGATGTTCCTGC+AGG | - | chr4.2:12254032-12254051 | MS.gene53495:intron | 50.0% |
| ! | TCCTCGTGTACGGATTACCA+GGG | - | chr4.2:12254348-12254367 | MS.gene53495:intron | 50.0% |
| !! | AACCCACTGGCTCCAATAAC+TGG | - | chr4.2:12255165-12255184 | MS.gene53495:intron | 50.0% |
| !! | CCACTGTTTGGCTCTGAGAT+TGG | + | chr4.2:12257617-12257636 | None:intergenic | 50.0% |
| !! | GAGATTGGGGCATTGACTGT+AGG | + | chr4.2:12257602-12257621 | None:intergenic | 50.0% |
| AAGTAGCCCATGTCCCTTGC+GGG | - | chr4.2:12256180-12256199 | MS.gene53495:intron | 55.0% | |
| CAAGTAGCCCATGTCCCTTG+CGG | - | chr4.2:12256179-12256198 | MS.gene53495:intron | 55.0% | |
| CCGGCTCCTATGCTTGTGAA+AGG | - | chr4.2:12255234-12255253 | MS.gene53495:intron | 55.0% | |
| CGTCTTATGTTCCCGGGAAG+AGG | - | chr4.2:12255448-12255467 | MS.gene53495:intron | 55.0% | |
| CTTACCAGGTGGAGGAACAG+AGG | + | chr4.2:12253888-12253907 | None:intergenic | 55.0% | |
| CTTATGTTCCCGGGAAGAGG+CGG | - | chr4.2:12255451-12255470 | MS.gene53495:intron | 55.0% | |
| GTGAGAAACCACCATCCCGT+CGG | + | chr4.2:12254487-12254506 | None:intergenic | 55.0% | |
| GTTTGGTTGTTTGGCCCGAC+GGG | - | chr4.2:12254469-12254488 | MS.gene53495:intron | 55.0% | |
| TGAGAAACCACCATCCCGTC+GGG | + | chr4.2:12254486-12254505 | None:intergenic | 55.0% | |
| TGGGGGTCATTTGGCTACTC+GGG | - | chr4.2:12254974-12254993 | MS.gene53495:intron | 55.0% | |
| TTGTAGGAAGGCGGAAGGAG+GGG | + | chr4.2:12256567-12256586 | None:intergenic | 55.0% | |
| ! | CCTCGTGTACGGATTACCAG+GGG | - | chr4.2:12254349-12254368 | MS.gene53495:intron | 55.0% |
| ! | CTCGTGTACGGATTACCAGG+GGG | - | chr4.2:12254350-12254369 | MS.gene53495:intron | 55.0% |
| ! | GAACAGCGTTGGAGCTTACC+AGG | + | chr4.2:12253902-12253921 | None:intergenic | 55.0% |
| ! | GGTTTGGTTGTTTGGCCCGA+CGG | - | chr4.2:12254468-12254487 | MS.gene53495:intron | 55.0% |
| ACCTCACGGGACAACCGACT+CGG | - | chr4.2:12257437-12257456 | MS.gene53495:intron | 60.0% | |
| ATGTCCCTTGCGGGAACTGC+CGG | - | chr4.2:12256189-12256208 | MS.gene53495:intron | 60.0% | |
| CCCCTGGTAATCCGTACACG+AGG | + | chr4.2:12254352-12254371 | None:intergenic | 60.0% | |
| CGTTGGAGCTTACCAGGTGG+AGG | + | chr4.2:12253896-12253915 | None:intergenic | 60.0% | |
| GCAGTTCCCGCAAGGGACAT+GGG | + | chr4.2:12256189-12256208 | None:intergenic | 60.0% | |
| GTCCCGTGAGGTCTATGACC+AGG | + | chr4.2:12257429-12257448 | None:intergenic | 60.0% | |
| TGTAGGAAGGCGGAAGGAGG+GGG | + | chr4.2:12256566-12256585 | None:intergenic | 60.0% | |
| TTGTCCGGCAGTTCCCGCAA+GGG | + | chr4.2:12256196-12256215 | None:intergenic | 60.0% | |
| ! | ATTGGAGCCAGTGGGTTCGC+AGG | + | chr4.2:12255162-12255181 | None:intergenic | 60.0% |
| ! | CAGCGTTGGAGCTTACCAGG+TGG | + | chr4.2:12253899-12253918 | None:intergenic | 60.0% |
| ! | TTGGAGCCAGTGGGTTCGCA+GGG | + | chr4.2:12255161-12255180 | None:intergenic | 60.0% |
| AGCAAGCCCTGCGAACCCAC+TGG | - | chr4.2:12255152-12255171 | MS.gene53495:intron | 65.0% | |
| GGCAGTTCCCGCAAGGGACA+TGG | + | chr4.2:12256190-12256209 | None:intergenic | 65.0% | |
| GGTTGTTTGGCCCGACGGGA+TGG | - | chr4.2:12254473-12254492 | MS.gene53495:intron | 65.0% | |
| GTTGTCCGGCAGTTCCCGCA+AGG | + | chr4.2:12256197-12256216 | None:intergenic | 65.0% | |
| TGTTTGGCCCGACGGGATGG+TGG | - | chr4.2:12254476-12254495 | MS.gene53495:intron | 65.0% | |
| ! | CCTCACGGGACAACCGACTC+GGG | - | chr4.2:12257438-12257457 | MS.gene53495:intron | 65.0% |
| ! | GAGCCGGGCTGCCACCTTTT+TGG | + | chr4.2:12255221-12255240 | None:intergenic | 65.0% |
| CCCGAGTCGGTTGTCCCGTG+AGG | + | chr4.2:12257441-12257460 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 12253791 | 12257837 | 12253791 | ID=MS.gene53495 |
| chr4.2 | mRNA | 12253791 | 12257837 | 12253791 | ID=MS.gene53495.t1;Parent=MS.gene53495 |
| chr4.2 | exon | 12257726 | 12257837 | 12257726 | ID=MS.gene53495.t1.exon1;Parent=MS.gene53495.t1 |
| chr4.2 | CDS | 12257726 | 12257837 | 12257726 | ID=cds.MS.gene53495.t1;Parent=MS.gene53495.t1 |
| chr4.2 | exon | 12257464 | 12257574 | 12257464 | ID=MS.gene53495.t1.exon2;Parent=MS.gene53495.t1 |
| chr4.2 | CDS | 12257464 | 12257574 | 12257464 | ID=cds.MS.gene53495.t1;Parent=MS.gene53495.t1 |
| chr4.2 | exon | 12255345 | 12255457 | 12255345 | ID=MS.gene53495.t1.exon3;Parent=MS.gene53495.t1 |
| chr4.2 | CDS | 12255345 | 12255457 | 12255345 | ID=cds.MS.gene53495.t1;Parent=MS.gene53495.t1 |
| chr4.2 | exon | 12254146 | 12254226 | 12254146 | ID=MS.gene53495.t1.exon4;Parent=MS.gene53495.t1 |
| chr4.2 | CDS | 12254146 | 12254226 | 12254146 | ID=cds.MS.gene53495.t1;Parent=MS.gene53495.t1 |
| chr4.2 | exon | 12253951 | 12254022 | 12253951 | ID=MS.gene53495.t1.exon5;Parent=MS.gene53495.t1 |
| chr4.2 | CDS | 12253951 | 12254022 | 12253951 | ID=cds.MS.gene53495.t1;Parent=MS.gene53495.t1 |
| chr4.2 | exon | 12253791 | 12253832 | 12253791 | ID=MS.gene53495.t1.exon6;Parent=MS.gene53495.t1 |
| chr4.2 | CDS | 12253791 | 12253832 | 12253791 | ID=cds.MS.gene53495.t1;Parent=MS.gene53495.t1 |
| Gene Sequence |
| Protein sequence |
