AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene53562

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53562.t1 MTR_1g045610 98.062 258 5 0 1 258 1 258 0.0 535
MS.gene53562.t1 MTR_1g073170 65.975 241 74 4 5 238 4 243 2.51e-102 298
MS.gene53562.t1 MTR_1g110460 69.091 110 34 0 17 126 22 131 2.38e-53 175
MS.gene53562.t1 MTR_7g035075 70.476 105 31 0 22 126 15 119 1.80e-52 169
MS.gene53562.t1 MTR_1g086530 69.159 107 33 0 20 126 32 138 4.01e-52 171
MS.gene53562.t1 MTR_1g086510 70.476 105 31 0 22 126 22 126 6.68e-52 170
MS.gene53562.t1 MTR_6g006030 69.524 105 32 0 22 126 15 119 8.26e-52 168
MS.gene53562.t1 MTR_4g063100 65.455 110 38 0 15 124 1 110 5.44e-51 167
MS.gene53562.t1 MTR_2g096380 64.602 113 39 1 15 127 1 112 6.86e-50 164
MS.gene53562.t1 MTR_5g078140 51.515 165 73 4 22 180 13 176 8.35e-47 158
MS.gene53562.t1 MTR_4g478180 60.909 110 43 0 15 124 7 116 1.32e-46 159
MS.gene53562.t1 MTR_7g117730 63.810 105 38 0 23 127 14 118 7.67e-46 154
MS.gene53562.t1 MTR_4g073420 55.072 138 59 2 23 160 14 148 9.10e-46 155
MS.gene53562.t1 MTR_4g121460 66.990 103 34 0 22 124 13 115 1.12e-45 156
MS.gene53562.t1 MTR_2g033170 70.476 105 31 0 22 126 25 129 1.96e-45 155
MS.gene53562.t1 MTR_3g097450 62.727 110 41 0 15 124 6 115 2.82e-45 154
MS.gene53562.t1 MTR_7g076740 61.682 107 40 1 22 127 13 119 5.22e-45 153
MS.gene53562.t1 MTR_4g102380 65.049 103 36 0 22 124 13 115 1.48e-44 151
MS.gene53562.t1 MTR_4g125520 60.000 110 44 0 18 127 9 118 1.78e-44 152
MS.gene53562.t1 MTR_5g007370 56.481 108 47 0 17 124 8 115 5.68e-44 150
MS.gene53562.t1 MTR_3g074520 58.182 110 46 0 15 124 6 115 7.24e-44 151
MS.gene53562.t1 MTR_8g027345 65.686 102 35 0 23 124 14 115 7.45e-44 150
MS.gene53562.t1 MTR_7g115650 59.048 105 43 0 22 126 13 117 1.82e-43 146
MS.gene53562.t1 MTR_2g034790 63.107 103 38 0 22 124 13 115 2.05e-43 150
MS.gene53562.t1 MTR_3g083540 62.264 106 40 0 22 127 42 147 2.05e-43 149
MS.gene53562.t1 MTR_3g065440 53.906 128 57 1 22 149 13 138 2.06e-43 149
MS.gene53562.t1 MTR_4g123040 67.619 105 34 0 22 126 25 129 2.29e-43 149
MS.gene53562.t1 MTR_8g031360 60.577 104 40 1 22 124 14 117 3.58e-43 148
MS.gene53562.t1 MTR_7g011170 63.107 103 38 0 22 124 13 115 5.01e-43 148
MS.gene53562.t1 MTR_2g011660 61.165 103 40 0 22 124 14 116 5.55e-43 149
MS.gene53562.t1 MTR_1g085040 58.772 114 47 0 13 126 4 117 5.88e-43 150
MS.gene53562.t1 MTR_5g029840 62.136 103 39 0 22 124 13 115 5.95e-43 149
MS.gene53562.t1 MTR_1g076150 61.165 103 40 0 22 124 13 115 1.07e-42 146
MS.gene53562.t1 MTR_2g099740 56.250 112 49 0 13 124 4 115 1.09e-42 150
MS.gene53562.t1 MTR_3g011610 55.372 121 50 1 6 126 26 142 1.20e-42 152
MS.gene53562.t1 MTR_1g100653 56.250 112 49 0 15 126 6 117 2.01e-42 146
MS.gene53562.t1 MTR_7g096930 46.795 156 77 3 22 171 13 168 2.21e-42 146
MS.gene53562.t1 MTR_5g079670 56.364 110 48 0 15 124 5 114 3.23e-42 143
MS.gene53562.t1 MTR_1g062940 60.952 105 41 0 22 126 7 111 4.81e-42 143
MS.gene53562.t1 MTR_8g095390 59.091 110 45 0 15 124 6 115 5.35e-42 146
MS.gene53562.t1 MTR_2g089620 60.194 103 41 0 22 124 13 115 6.02e-42 146
MS.gene53562.t1 MTR_4g091490 60.194 103 41 0 22 124 14 116 6.27e-42 147
MS.gene53562.t1 MTR_1g112760 57.143 112 48 0 13 124 5 116 6.64e-42 143
MS.gene53562.t1 MTR_3g052450 59.091 110 45 0 17 126 36 145 9.13e-42 150
MS.gene53562.t1 MTR_3g052430 60.952 105 41 0 22 126 42 146 9.20e-42 150
MS.gene53562.t1 MTR_8g017440 56.250 112 49 0 13 124 4 115 1.02e-41 145
MS.gene53562.t1 MTR_4g065017 42.714 199 91 4 22 198 18 215 1.50e-41 145
MS.gene53562.t1 MTR_2g064160 54.386 114 52 0 11 124 1 114 2.96e-41 144
MS.gene53562.t1 MTR_1g043080 55.455 110 49 0 15 124 6 115 3.44e-41 142
MS.gene53562.t1 MTR_0140s0030 50.746 134 66 0 22 155 14 147 3.51e-41 144
MS.gene53562.t1 MTR_0489s0020 50.746 134 66 0 22 155 14 147 3.51e-41 144
MS.gene53562.t1 MTR_3g077110 61.165 103 40 0 22 124 13 115 5.36e-41 144
MS.gene53562.t1 MTR_0008s0390 56.034 116 51 0 22 137 14 129 6.97e-41 142
MS.gene53562.t1 MTR_7g111290 61.905 105 40 0 13 117 4 108 7.48e-41 144
MS.gene53562.t1 MTR_4g485530 60.784 102 40 0 23 124 14 115 8.07e-41 139
MS.gene53562.t1 MTR_2g097910 54.400 125 49 1 22 138 21 145 8.20e-41 143
MS.gene53562.t1 MTR_1g100667 61.538 104 40 0 22 125 14 117 1.08e-40 141
MS.gene53562.t1 MTR_4g082290 63.107 103 38 0 22 124 13 115 1.19e-40 144
MS.gene53562.t1 MTR_1g021230 60.000 105 42 0 22 126 58 162 1.25e-40 145
MS.gene53562.t1 MTR_8g042410 59.048 105 43 0 20 124 36 140 1.40e-40 147
MS.gene53562.t1 MTR_7g087130 56.897 116 49 1 22 137 13 127 1.43e-40 143
MS.gene53562.t1 MTR_4g082230 62.136 103 39 0 22 124 13 115 2.16e-40 144
MS.gene53562.t1 MTR_7g010210 57.143 112 48 0 15 126 6 117 2.50e-40 142
MS.gene53562.t1 MTR_8g017540 55.357 112 50 0 13 124 50 161 2.64e-40 143
MS.gene53562.t1 MTR_1g043050 54.867 113 51 0 15 127 6 118 2.68e-40 140
MS.gene53562.t1 MTR_3g028740 60.000 105 42 0 22 126 23 127 2.79e-40 142
MS.gene53562.t1 MTR_7g010210 57.143 112 48 0 15 126 6 117 2.90e-40 140
MS.gene53562.t1 MTR_6g012690 61.165 103 40 0 22 124 13 115 2.91e-40 142
MS.gene53562.t1 MTR_0251s0050 59.434 106 43 0 22 127 14 119 4.37e-40 140
MS.gene53562.t1 MTR_6g055910 56.881 109 47 0 16 124 9 117 4.49e-40 140
MS.gene53562.t1 MTR_8g020490 61.765 102 39 0 23 124 10 111 4.52e-40 139
MS.gene53562.t1 MTR_8g098860 54.386 114 52 0 13 126 4 117 4.94e-40 141
MS.gene53562.t1 MTR_3g039990 44.706 170 87 3 22 188 14 179 5.36e-40 140
MS.gene53562.t1 MTR_4g100720 57.407 108 46 0 18 125 10 117 7.38e-40 136
MS.gene53562.t1 MTR_7g110830 55.263 114 51 0 13 126 4 117 9.21e-40 141
MS.gene53562.t1 MTR_8g017500 54.464 112 51 0 13 124 4 115 1.26e-39 140
MS.gene53562.t1 MTR_0008s0470 54.310 116 53 0 22 137 14 129 1.55e-39 139
MS.gene53562.t1 MTR_1g085640 55.263 114 51 0 13 126 4 117 2.98e-39 140
MS.gene53562.t1 MTR_0008s0280 57.143 105 45 0 22 126 13 117 5.33e-39 135
MS.gene53562.t1 MTR_4g105130 55.357 112 50 0 13 124 4 115 1.54e-38 138
MS.gene53562.t1 MTR_8g017340 54.867 113 50 1 13 124 4 116 1.75e-38 140
MS.gene53562.t1 MTR_5g010020 55.140 107 48 0 13 119 4 110 3.13e-38 137
MS.gene53562.t1 MTR_8g017390 54.867 113 50 1 13 124 4 116 3.85e-38 139
MS.gene53562.t1 MTR_4g063100 76.712 73 17 0 52 124 9 81 5.71e-38 133
MS.gene53562.t1 MTR_2g089450 58.824 102 42 0 22 123 13 114 6.12e-38 134
MS.gene53562.t1 MTR_8g017350 53.982 113 51 1 13 124 4 116 1.59e-37 139
MS.gene53562.t1 MTR_2g089420 59.223 103 42 0 22 124 12 114 1.61e-37 137
MS.gene53562.t1 MTR_1g017000 52.252 111 52 1 15 124 6 116 2.15e-37 132
MS.gene53562.t1 MTR_6g009430 56.311 103 45 0 22 124 13 115 2.20e-37 134
MS.gene53562.t1 MTR_6g012180 56.604 106 46 0 15 120 6 111 4.23e-37 133
MS.gene53562.t1 MTR_0063s0090 53.774 106 49 0 22 127 13 118 5.70e-37 130
MS.gene53562.t1 MTR_2g096380 72.368 76 21 0 52 127 18 93 2.26e-36 129
MS.gene53562.t1 MTR_1g017140 53.333 120 53 2 22 138 13 132 3.93e-36 131
MS.gene53562.t1 MTR_7g109320 63.462 104 38 0 22 125 13 116 4.14e-36 131
MS.gene53562.t1 MTR_4g057635 56.731 104 44 1 22 124 13 116 8.65e-36 130
MS.gene53562.t1 MTR_3g103570 51.639 122 56 2 22 140 13 134 1.77e-35 129
MS.gene53562.t1 MTR_3g461490 52.727 110 52 0 15 124 6 115 2.58e-35 129
MS.gene53562.t1 MTR_5g042030 55.340 103 46 0 22 124 8 110 2.80e-35 127
MS.gene53562.t1 MTR_5g079120 55.769 104 46 0 22 125 62 165 4.82e-35 127
MS.gene53562.t1 MTR_2g067420 56.566 99 43 0 22 120 15 113 6.57e-35 127
MS.gene53562.t1 MTR_2g088170 58.095 105 44 0 22 126 30 134 9.81e-35 130
MS.gene53562.t1 MTR_5g014990 44.586 157 70 3 22 175 13 155 1.17e-34 126
MS.gene53562.t1 MTR_2g095520 56.566 99 42 1 22 119 13 111 2.57e-34 126
MS.gene53562.t1 MTR_7g102110 53.846 104 47 1 22 124 13 116 3.24e-34 124
MS.gene53562.t1 MTR_1g083630 55.238 105 47 0 22 126 13 117 5.58e-34 129
MS.gene53562.t1 MTR_5g078910 54.808 104 47 0 22 125 8 111 7.22e-34 124
MS.gene53562.t1 MTR_0197s0010 55.556 99 44 0 26 124 6 104 8.72e-34 122
MS.gene53562.t1 MTR_8g006470 49.565 115 57 1 13 126 2 116 2.41e-33 122
MS.gene53562.t1 MTR_5g079290 54.369 103 47 0 22 124 18 120 6.88e-33 120
MS.gene53562.t1 MTR_4g097570 55.670 97 42 1 22 117 13 109 9.62e-33 121
MS.gene53562.t1 MTR_5g078800 54.808 104 47 0 22 125 8 111 1.90e-32 119
MS.gene53562.t1 MTR_6g090405 52.885 104 48 1 22 124 13 116 2.28e-32 119
MS.gene53562.t1 MTR_4g128670 55.556 99 43 1 22 119 13 111 2.89e-32 121
MS.gene53562.t1 MTR_8g060940 55.000 100 45 0 22 121 8 107 2.99e-32 119
MS.gene53562.t1 MTR_5g079220 54.369 103 47 0 22 124 22 124 3.34e-32 119
MS.gene53562.t1 MTR_4g097570 55.102 98 42 2 22 117 13 110 9.43e-32 119
MS.gene53562.t1 MTR_0247s0040 54.455 101 46 0 22 122 8 108 9.55e-32 115
MS.gene53562.t1 MTR_5g088640 33.166 199 112 4 22 216 13 194 1.38e-31 117
MS.gene53562.t1 MTR_7g017260 38.554 166 97 2 22 185 26 188 1.46e-31 117
MS.gene53562.t1 MTR_0001s0360 53.846 104 48 0 22 125 8 111 2.09e-31 117
MS.gene53562.t1 MTR_5g088080 37.423 163 89 3 22 180 13 166 3.90e-31 116
MS.gene53562.t1 MTR_5g088150 37.423 163 89 3 22 180 13 166 3.90e-31 116
MS.gene53562.t1 MTR_5g488210 37.423 163 89 3 22 180 13 166 3.90e-31 116
MS.gene53562.t1 MTR_5g488170 37.423 163 89 3 22 180 13 166 6.86e-31 115
MS.gene53562.t1 MTR_5g078860 52.885 104 49 0 22 125 8 111 1.31e-30 115
MS.gene53562.t1 MTR_5g062790 33.971 209 108 7 22 219 10 199 1.37e-30 115
MS.gene53562.t1 MTR_5g078930 51.456 103 50 0 22 124 10 112 2.59e-30 113
MS.gene53562.t1 MTR_0193s0090 51.961 102 49 0 22 123 8 109 2.66e-30 112
MS.gene53562.t1 MTR_3g101290 50.485 103 50 1 23 125 37 138 2.94e-30 113
MS.gene53562.t1 MTR_4g029540 44.262 122 63 2 22 138 11 132 3.66e-30 114
MS.gene53562.t1 MTR_6g055910 65.753 73 25 0 52 124 16 88 6.15e-30 113
MS.gene53562.t1 MTR_5g078950 50.495 101 50 0 22 122 8 108 2.68e-29 111
MS.gene53562.t1 MTR_5g016510 48.113 106 52 2 23 127 5 108 1.73e-28 110
MS.gene53562.t1 MTR_5g088610 46.429 112 56 2 22 129 10 121 2.37e-28 110
MS.gene53562.t1 MTR_3g045430 49.524 105 53 0 20 124 12 116 3.05e-28 109
MS.gene53562.t1 MTR_6g015455 49.515 103 49 2 23 124 5 105 6.31e-28 112
MS.gene53562.t1 MTR_4g094982 46.667 105 55 1 23 127 5 108 1.23e-27 107
MS.gene53562.t1 MTR_7g111290 72.727 66 18 0 52 117 1 66 1.28e-27 108
MS.gene53562.t1 MTR_5g070020 51.000 100 46 2 19 117 118 215 6.38e-27 107
MS.gene53562.t1 MTR_5g049190 51.042 96 44 2 23 117 19 112 1.39e-26 103
MS.gene53562.t1 MTR_5g007300 53.947 76 35 0 22 97 65 140 1.61e-26 100
MS.gene53562.t1 MTR_4g019370 49.038 104 50 2 23 125 38 139 1.62e-26 105
MS.gene53562.t1 MTR_3g077650 30.045 223 139 5 23 244 181 387 2.13e-25 104
MS.gene53562.t1 MTR_5g082910 48.000 100 49 2 23 121 19 116 5.15e-25 100
MS.gene53562.t1 MTR_3g463400 42.400 125 64 3 23 141 133 255 1.21e-24 102
MS.gene53562.t1 MTR_4g105660 48.485 99 48 2 20 117 177 273 3.32e-24 100
MS.gene53562.t1 MTR_7g037260 39.837 123 73 1 23 145 145 266 1.17e-23 98.2
MS.gene53562.t1 MTR_7g061330 47.573 103 51 2 23 124 113 213 1.19e-23 99.8
MS.gene53562.t1 MTR_7g061330 38.000 100 60 2 23 121 61 159 2.72e-12 66.6
MS.gene53562.t1 MTR_7g461410 47.573 103 51 2 23 124 113 213 1.19e-23 99.8
MS.gene53562.t1 MTR_7g461410 38.000 100 60 2 23 121 61 159 2.72e-12 66.6
MS.gene53562.t1 MTR_3g110028 44.660 103 54 2 23 124 85 185 1.42e-23 100
MS.gene53562.t1 MTR_7g061330 47.573 103 51 2 23 124 77 177 1.47e-23 99.4
MS.gene53562.t1 MTR_7g061330 38.000 100 60 2 23 121 25 123 2.77e-12 66.6
MS.gene53562.t1 MTR_7g451170 46.154 117 53 4 23 138 191 298 2.15e-23 98.2
MS.gene53562.t1 MTR_7g450950 32.237 152 96 2 23 168 157 307 6.96e-23 95.9
MS.gene53562.t1 MTR_1g026870 43.689 103 55 2 23 124 85 185 8.15e-23 97.8
MS.gene53562.t1 MTR_1g026870 34.000 100 64 2 23 121 33 131 1.41e-11 64.7
MS.gene53562.t1 MTR_6g074860 43.590 117 55 3 23 130 4 118 9.94e-23 93.6
MS.gene53562.t1 MTR_1g085880 47.475 99 51 1 26 123 17 115 1.70e-22 92.0
MS.gene53562.t1 MTR_5g041570 38.760 129 73 3 23 150 134 257 5.50e-22 94.4
MS.gene53562.t1 MTR_1g085770 47.475 99 51 1 26 123 17 115 6.46e-22 92.8
MS.gene53562.t1 MTR_1g057980 43.878 98 54 1 22 119 79 175 6.50e-22 92.4
MS.gene53562.t1 MTR_4g088015 38.211 123 75 1 23 145 221 342 1.29e-21 93.6
MS.gene53562.t1 MTR_4g128190 35.625 160 85 5 22 178 12 156 1.34e-21 90.5
MS.gene53562.t1 MTR_5g010650 50.000 96 45 2 23 117 110 203 1.64e-21 93.6
MS.gene53562.t1 MTR_4g082040 36.090 133 79 3 23 154 105 232 4.22e-21 92.0
MS.gene53562.t1 MTR_6g027340 42.708 96 52 2 23 117 16 109 9.35e-21 87.4
MS.gene53562.t1 MTR_4g063100 76.087 46 11 0 79 124 1 46 2.83e-20 85.9
MS.gene53562.t1 MTR_6g027360 41.837 98 54 2 23 119 78 173 3.64e-20 88.2
MS.gene53562.t1 MTR_7g061550 43.564 101 54 2 26 124 10 109 6.08e-20 88.2
MS.gene53562.t1 MTR_2g096380 71.429 49 14 0 79 127 1 49 6.25e-20 84.3
MS.gene53562.t1 MTR_7g035350 39.024 123 66 4 26 146 228 343 7.39e-20 88.6
MS.gene53562.t1 MTR_7g037130 41.228 114 63 2 23 133 145 257 1.54e-19 87.0
MS.gene53562.t1 MTR_5g038910 41.176 102 57 2 26 126 29 128 4.93e-19 85.9
MS.gene53562.t1 MTR_5g038910 41.176 102 57 2 26 126 29 128 5.05e-19 86.3
MS.gene53562.t1 MTR_3g089045 45.631 103 53 2 23 124 16 116 1.26e-18 83.6
MS.gene53562.t1 MTR_8g468380 39.091 110 64 2 26 134 25 132 2.18e-18 84.3
MS.gene53562.t1 MTR_6g027370 40.777 103 58 2 23 124 99 199 7.33e-18 82.0
MS.gene53562.t1 MTR_7g086960 43.000 100 54 2 19 117 85 182 2.29e-17 80.9
MS.gene53562.t1 MTR_0023s0210 44.737 76 42 0 22 97 8 83 4.76e-15 68.9
MS.gene53562.t1 MTR_6g055910 58.696 46 19 0 79 124 2 47 2.25e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53562.t1 AT4G13480 54.511 266 93 5 16 258 1 261 7.26e-88 261
MS.gene53562.t1 AT3G24310 59.160 262 79 8 18 258 15 269 2.21e-87 261
MS.gene53562.t1 AT3G30210 47.059 255 94 8 22 258 28 259 5.61e-64 201
MS.gene53562.t1 AT3G46130 39.608 255 133 4 15 258 3 247 1.77e-53 174
MS.gene53562.t1 AT5G59780 69.725 109 33 0 18 126 5 113 4.03e-53 172
MS.gene53562.t1 AT3G27810 69.091 110 33 1 17 126 17 125 3.06e-52 169
MS.gene53562.t1 AT1G48000 71.429 105 30 0 22 126 33 137 1.07e-51 169
MS.gene53562.t1 AT5G40350 70.588 102 30 0 22 123 18 119 1.75e-51 167
MS.gene53562.t1 AT1G68320 66.972 109 36 0 18 126 16 124 3.88e-51 169
MS.gene53562.t1 AT1G25340 67.619 105 34 0 22 126 19 123 2.85e-50 166
MS.gene53562.t1 AT2G47190 66.981 106 35 0 22 127 21 126 1.35e-49 164
MS.gene53562.t1 AT3G01530 58.730 126 52 0 1 126 5 130 3.42e-49 161
MS.gene53562.t1 AT1G06180 61.062 113 44 0 22 134 13 125 1.59e-46 155
MS.gene53562.t1 AT3G53200 65.421 107 37 0 18 124 6 112 1.74e-46 155
MS.gene53562.t1 AT5G14750 62.500 104 39 0 21 124 16 119 3.41e-46 153
MS.gene53562.t1 AT5G40330 61.111 108 42 0 17 124 8 115 3.89e-46 154
MS.gene53562.t1 AT5G49620 68.750 112 35 0 15 126 20 131 8.24e-46 155
MS.gene53562.t1 AT1G25340 64.762 105 32 1 22 126 19 118 1.14e-45 154
MS.gene53562.t1 AT1G25340 64.762 105 32 1 22 126 19 118 1.84e-45 155
MS.gene53562.t1 AT5G10280 60.000 110 44 0 15 124 6 115 2.24e-45 155
MS.gene53562.t1 AT1G22640 66.667 102 34 0 23 124 14 115 2.47e-45 153
MS.gene53562.t1 AT1G35515 62.832 113 42 0 15 127 6 118 2.49e-45 151
MS.gene53562.t1 AT3G06490 66.964 112 36 1 16 126 13 124 5.16e-45 154
MS.gene53562.t1 AT3G62610 62.963 108 40 0 22 129 13 120 1.58e-44 153
MS.gene53562.t1 AT4G28110 62.136 103 39 0 22 124 13 115 2.42e-44 151
MS.gene53562.t1 AT3G27920 44.242 165 90 1 17 179 10 174 5.33e-44 149
MS.gene53562.t1 AT5G60890 59.821 112 45 0 15 126 6 117 5.68e-44 150
MS.gene53562.t1 AT2G31180 62.136 103 39 0 22 124 13 115 6.39e-44 149
MS.gene53562.t1 AT5G07690 63.810 105 38 0 19 123 10 114 7.15e-44 151
MS.gene53562.t1 AT4G09460 65.686 102 35 0 23 124 14 115 8.16e-44 148
MS.gene53562.t1 AT5G26660 59.649 114 46 0 13 126 4 117 1.10e-43 151
MS.gene53562.t1 AT5G16770 59.091 110 45 0 15 124 6 115 1.13e-43 150
MS.gene53562.t1 AT5G16770 59.091 110 45 0 15 124 6 115 1.13e-43 150
MS.gene53562.t1 AT5G54230 63.107 103 38 0 22 124 13 115 1.14e-43 150
MS.gene53562.t1 AT5G65230 60.185 108 43 0 17 124 8 115 1.26e-43 150
MS.gene53562.t1 AT3G02940 59.091 110 45 0 15 124 6 115 1.32e-43 150
MS.gene53562.t1 AT4G34990 43.605 172 95 1 15 186 6 175 1.75e-43 149
MS.gene53562.t1 AT1G09540 59.649 114 46 0 13 126 4 117 1.78e-43 151
MS.gene53562.t1 AT1G66230 53.846 130 51 1 22 142 13 142 1.91e-43 149
MS.gene53562.t1 AT2G16720 60.909 110 43 0 15 124 6 115 2.28e-43 148
MS.gene53562.t1 AT2G32460 58.407 113 47 0 14 126 11 123 2.38e-43 153
MS.gene53562.t1 AT5G16770 59.091 110 45 0 15 124 6 115 2.54e-43 150
MS.gene53562.t1 AT5G16770 59.091 110 45 0 15 124 6 115 2.54e-43 150
MS.gene53562.t1 AT3G02940 59.091 110 45 0 15 124 6 115 2.68e-43 149
MS.gene53562.t1 AT3G02940 59.091 110 45 0 15 124 6 115 2.68e-43 149
MS.gene53562.t1 AT5G16600 48.428 159 64 4 22 164 13 169 2.83e-43 149
MS.gene53562.t1 AT4G05100 61.165 103 40 0 22 124 14 116 2.97e-43 149
MS.gene53562.t1 AT3G47600 48.052 154 74 1 22 169 13 166 4.11e-43 149
MS.gene53562.t1 AT4G21440 57.273 110 47 0 15 124 6 115 5.37e-43 149
MS.gene53562.t1 AT1G57560 50.355 141 61 1 13 144 4 144 6.62e-43 147
MS.gene53562.t1 AT1G34670 59.091 110 45 0 15 124 6 115 7.36e-43 149
MS.gene53562.t1 AT5G07700 58.772 114 41 1 11 124 8 115 7.52e-43 149
MS.gene53562.t1 AT5G07700 58.772 114 41 1 11 124 8 115 7.52e-43 149
MS.gene53562.t1 AT4G22680 39.151 212 108 3 22 231 13 205 7.54e-43 147
MS.gene53562.t1 AT3G13540 62.136 103 39 0 22 124 24 126 7.54e-43 146
MS.gene53562.t1 AT4G12350 62.136 103 39 0 22 124 13 115 8.94e-43 147
MS.gene53562.t1 AT5G61420 61.321 106 41 0 19 124 10 115 9.01e-43 149
MS.gene53562.t1 AT1G57560 58.929 112 46 0 13 124 4 115 9.06e-43 148
MS.gene53562.t1 AT2G32460 56.897 116 44 1 11 126 2 111 1.05e-42 151
MS.gene53562.t1 AT3G01140 64.078 103 37 0 22 124 13 115 1.66e-42 148
MS.gene53562.t1 AT3G11440 60.000 105 42 0 20 124 40 144 2.14e-42 150
MS.gene53562.t1 AT4G38620 60.952 105 41 0 23 127 14 118 2.23e-42 146
MS.gene53562.t1 AT1G18570 64.078 103 37 0 22 124 14 116 2.27e-42 148
MS.gene53562.t1 AT2G47460 54.331 127 47 1 22 148 13 128 2.43e-42 148
MS.gene53562.t1 AT3G13890 55.357 112 50 0 13 124 4 115 2.82e-42 148
MS.gene53562.t1 AT3G01140 64.078 103 37 0 22 124 56 158 3.23e-42 148
MS.gene53562.t1 AT5G49620 61.111 126 35 1 15 126 20 145 4.22e-42 146
MS.gene53562.t1 AT5G15310 63.107 103 38 0 22 124 13 115 4.22e-42 144
MS.gene53562.t1 AT5G62470 48.649 148 75 1 22 169 13 159 6.15e-42 147
MS.gene53562.t1 AT3G61250 59.223 103 42 0 22 124 13 115 9.98e-42 145
MS.gene53562.t1 AT4G26930 44.970 169 85 3 1 167 3 165 1.11e-41 147
MS.gene53562.t1 AT5G15310 63.107 103 38 0 22 124 13 115 1.12e-41 145
MS.gene53562.t1 AT5G15310 63.107 103 38 0 22 124 13 115 1.12e-41 145
MS.gene53562.t1 AT1G08810 54.918 122 54 1 22 143 13 133 1.39e-41 144
MS.gene53562.t1 AT3G11440 60.000 105 42 0 20 124 40 144 1.48e-41 149
MS.gene53562.t1 AT3G11440 60.000 105 42 0 20 124 40 144 1.48e-41 149
MS.gene53562.t1 AT3G11440 60.000 105 42 0 20 124 40 144 1.48e-41 149
MS.gene53562.t1 AT5G52600 59.615 104 42 0 22 125 13 116 1.78e-41 141
MS.gene53562.t1 AT5G06100 57.522 113 42 1 12 124 29 135 4.40e-41 147
MS.gene53562.t1 AT3G23250 52.991 117 55 0 22 138 13 129 9.47e-41 142
MS.gene53562.t1 AT5G49330 62.136 103 39 0 22 124 13 115 1.08e-40 143
MS.gene53562.t1 AT5G62320 60.000 110 37 1 22 124 14 123 1.12e-40 140
MS.gene53562.t1 AT5G06100 57.522 113 42 1 12 124 29 135 1.87e-40 146
MS.gene53562.t1 AT5G06100 57.522 113 42 1 12 124 29 135 1.87e-40 146
MS.gene53562.t1 AT5G06100 57.522 113 42 1 12 124 29 135 1.87e-40 146
MS.gene53562.t1 AT5G06100 57.522 113 42 1 12 124 29 135 1.87e-40 146
MS.gene53562.t1 AT1G63910 53.448 116 54 0 13 128 4 119 3.05e-40 142
MS.gene53562.t1 AT5G55020 60.577 104 41 0 20 123 25 128 3.55e-40 145
MS.gene53562.t1 AT4G01680 57.018 114 49 0 13 126 4 117 3.87e-40 139
MS.gene53562.t1 AT3G08500 60.952 105 41 0 22 126 31 135 4.80e-40 141
MS.gene53562.t1 AT1G74080 61.905 105 40 0 19 123 10 114 4.98e-40 141
MS.gene53562.t1 AT5G62470 48.649 148 74 2 22 169 13 158 5.68e-40 141
MS.gene53562.t1 AT4G01680 57.018 114 49 0 13 126 4 117 9.61e-40 140
MS.gene53562.t1 AT5G12870 59.048 105 43 0 22 126 19 123 1.15e-39 139
MS.gene53562.t1 AT4G17785 61.165 103 40 0 22 124 14 116 1.28e-39 140
MS.gene53562.t1 AT1G74430 58.182 110 45 1 22 130 13 122 1.41e-39 138
MS.gene53562.t1 AT4G17785 61.165 103 40 0 22 124 14 116 1.77e-39 140
MS.gene53562.t1 AT4G25560 36.596 235 138 4 22 246 11 244 2.30e-39 138
MS.gene53562.t1 AT2G26960 61.165 103 40 0 21 123 20 122 2.60e-39 141
MS.gene53562.t1 AT1G74650 61.165 103 40 0 22 124 13 115 2.73e-39 139
MS.gene53562.t1 AT3G13890 51.240 121 50 1 13 124 4 124 3.24e-39 140
MS.gene53562.t1 AT3G12720 51.304 115 56 0 10 124 11 125 3.42e-39 138
MS.gene53562.t1 AT1G79180 55.652 115 50 1 22 135 15 129 3.95e-39 138
MS.gene53562.t1 AT3G28910 60.194 103 41 0 22 124 13 115 1.57e-38 137
MS.gene53562.t1 AT5G35550 53.390 118 54 1 7 124 1 117 3.68e-38 134
MS.gene53562.t1 AT1G56160 56.311 103 45 0 22 124 15 117 3.73e-38 135
MS.gene53562.t1 AT1G16490 55.340 103 46 0 22 124 15 117 4.76e-38 134
MS.gene53562.t1 AT3G46130 37.069 232 121 5 38 258 8 225 5.65e-38 133
MS.gene53562.t1 AT3G46130 37.788 217 114 4 53 258 9 215 7.57e-38 132
MS.gene53562.t1 AT5G59780 79.452 73 15 0 54 126 20 92 1.31e-37 132
MS.gene53562.t1 AT3G48920 57.547 106 45 0 18 123 15 120 1.88e-37 132
MS.gene53562.t1 AT5G14340 58.491 106 44 0 22 127 25 130 2.56e-37 132
MS.gene53562.t1 AT4G01680 52.381 126 48 1 13 126 4 129 3.92e-37 134
MS.gene53562.t1 AT4G37780 57.692 104 43 1 22 124 13 116 2.38e-36 131
MS.gene53562.t1 AT5G56110 56.481 108 47 0 17 124 8 115 2.93e-36 131
MS.gene53562.t1 AT5G52260 58.252 103 43 0 22 124 13 115 3.30e-36 129
MS.gene53562.t1 AT3G28470 57.143 98 42 0 22 119 13 110 3.51e-36 130
MS.gene53562.t1 AT3G12820 55.340 103 46 0 22 124 15 117 5.59e-36 128
MS.gene53562.t1 AT3G27810 73.973 73 19 0 54 126 4 76 5.77e-36 126
MS.gene53562.t1 AT5G40350 74.286 70 18 0 54 123 5 74 9.58e-35 123
MS.gene53562.t1 AT1G66370 56.311 103 45 0 22 124 9 111 1.46e-34 125
MS.gene53562.t1 AT5G57620 56.731 104 44 1 22 124 13 116 1.64e-34 127
MS.gene53562.t1 AT1G18710 53.398 103 48 0 22 124 13 115 2.25e-34 125
MS.gene53562.t1 AT3G49690 55.140 107 47 1 22 127 13 119 5.69e-34 125
MS.gene53562.t1 AT5G65790 54.206 107 48 1 22 127 13 119 1.16e-33 125
MS.gene53562.t1 AT3G53200 74.648 71 18 0 54 124 9 79 1.64e-33 120
MS.gene53562.t1 AT5G23000 54.808 104 46 1 22 124 13 116 2.51e-33 124
MS.gene53562.t1 AT1G79180 42.568 148 51 2 22 135 15 162 1.08e-32 122
MS.gene53562.t1 AT2G36890 53.846 104 47 1 22 124 13 116 2.22e-32 120
MS.gene53562.t1 AT2G36890 53.846 104 47 1 22 124 54 157 4.64e-32 120
MS.gene53562.t1 AT2G26950 52.000 100 48 0 18 117 13 112 1.67e-31 120
MS.gene53562.t1 AT3G60460 48.649 111 56 1 17 126 7 117 3.26e-31 117
MS.gene53562.t1 AT1G66380 56.311 103 45 0 22 124 9 111 3.68e-31 112
MS.gene53562.t1 AT1G56650 55.340 103 46 0 22 124 9 111 1.63e-30 114
MS.gene53562.t1 AT1G66390 56.311 103 45 0 22 124 9 111 2.30e-30 114
MS.gene53562.t1 AT5G26660 69.863 73 22 0 54 126 14 86 3.59e-30 115
MS.gene53562.t1 AT3G47600 46.721 122 59 1 54 169 39 160 2.00e-28 110
MS.gene53562.t1 AT5G14750 58.025 81 29 1 49 124 5 85 7.39e-28 105
MS.gene53562.t1 AT5G58850 48.031 127 51 4 23 136 105 229 5.40e-27 108
MS.gene53562.t1 AT5G35550 61.842 76 29 0 49 124 45 120 6.59e-27 105
MS.gene53562.t1 AT3G27785 51.579 95 45 1 23 117 189 282 7.64e-27 108
MS.gene53562.t1 AT3G12820 66.176 68 23 0 57 124 2 69 8.33e-27 103
MS.gene53562.t1 AT2G23290 49.038 104 50 2 23 125 13 114 8.76e-27 105
MS.gene53562.t1 AT2G39880 48.544 103 50 2 23 124 50 150 7.58e-26 104
MS.gene53562.t1 AT3G09230 47.414 116 54 3 23 137 55 164 8.72e-26 104
MS.gene53562.t1 AT4G37260 46.602 103 54 1 23 125 13 114 1.05e-25 103
MS.gene53562.t1 AT3G55730 48.544 103 50 2 23 124 56 156 2.50e-25 103
MS.gene53562.t1 AT4G18770 48.421 95 48 1 23 117 217 310 6.19e-25 102
MS.gene53562.t1 AT5G02320 46.602 103 52 2 23 124 127 227 1.01e-24 102
MS.gene53562.t1 AT5G02320 37.000 100 61 2 23 121 75 173 8.98e-12 65.1
MS.gene53562.t1 AT5G02320 46.602 103 52 2 23 124 127 227 1.01e-24 102
MS.gene53562.t1 AT5G02320 37.000 100 61 2 23 121 75 173 8.98e-12 65.1
MS.gene53562.t1 AT5G02320 46.602 103 52 2 23 124 67 167 1.16e-24 102
MS.gene53562.t1 AT5G02320 37.000 100 61 2 23 121 15 113 9.24e-12 65.1
MS.gene53562.t1 AT5G11050 50.000 96 45 2 23 117 105 198 1.54e-24 101
MS.gene53562.t1 AT3G50060 44.231 104 55 2 23 125 6 107 2.05e-24 99.4
MS.gene53562.t1 AT3G09370 45.714 105 54 2 23 126 135 237 2.44e-24 101
MS.gene53562.t1 AT3G09370 37.000 100 61 2 23 121 83 181 7.28e-11 62.4
MS.gene53562.t1 AT3G09370 45.714 105 54 2 23 126 143 245 2.70e-24 101
MS.gene53562.t1 AT3G09370 37.000 100 61 2 23 121 91 189 5.66e-11 62.8
MS.gene53562.t1 AT3G09370 45.714 105 54 2 23 126 130 232 2.77e-24 101
MS.gene53562.t1 AT3G09370 37.000 100 61 2 23 121 78 176 8.48e-11 62.0
MS.gene53562.t1 AT5G11510 43.689 103 55 2 23 124 81 181 3.38e-23 99.0
MS.gene53562.t1 AT5G11510 36.000 100 62 2 23 121 29 127 1.24e-11 64.7
MS.gene53562.t1 AT5G11510 43.689 103 55 2 23 124 81 181 3.38e-23 99.0
MS.gene53562.t1 AT5G11510 36.000 100 62 2 23 121 29 127 1.24e-11 64.7
MS.gene53562.t1 AT5G11510 43.689 103 55 2 23 124 81 181 3.38e-23 99.0
MS.gene53562.t1 AT5G11510 36.000 100 62 2 23 121 29 127 1.24e-11 64.7
MS.gene53562.t1 AT5G11510 43.689 103 55 2 23 124 81 181 3.47e-23 99.0
MS.gene53562.t1 AT5G11510 36.000 100 62 2 23 121 29 127 1.00e-11 65.1
MS.gene53562.t1 AT5G11510 43.689 103 55 2 23 124 81 181 3.53e-23 99.0
MS.gene53562.t1 AT5G11510 36.000 100 62 2 23 121 29 127 9.39e-12 65.1
MS.gene53562.t1 AT5G67300 44.231 104 55 2 23 125 6 107 1.20e-22 94.7
MS.gene53562.t1 AT5G40360 36.641 131 76 3 17 141 152 281 1.66e-22 95.1
MS.gene53562.t1 AT4G32730 42.718 103 56 2 23 124 87 187 5.40e-22 95.5
MS.gene53562.t1 AT4G32730 42.718 103 56 2 23 124 87 187 5.40e-22 95.5
MS.gene53562.t1 AT4G32730 42.718 103 56 2 23 124 87 187 5.40e-22 95.5
MS.gene53562.t1 AT4G32730 42.718 103 56 2 23 124 87 187 5.40e-22 95.5
MS.gene53562.t1 AT4G32730 42.718 103 56 2 23 124 87 187 5.45e-22 95.5
MS.gene53562.t1 AT4G32730 30.252 119 81 2 4 121 16 133 9.71e-11 62.0
MS.gene53562.t1 AT1G17950 44.762 105 55 2 23 126 5 107 5.91e-22 91.7
MS.gene53562.t1 AT5G59780 79.167 48 10 0 79 126 1 48 6.40e-22 89.7
MS.gene53562.t1 AT3G46130 79.167 48 10 0 79 126 1 48 1.29e-21 89.7
MS.gene53562.t1 AT1G69560 43.689 103 55 2 23 124 107 207 1.59e-21 92.0
MS.gene53562.t1 AT1G69560 43.689 103 55 2 23 124 123 223 1.62e-21 92.4
MS.gene53562.t1 AT1G26780 40.870 115 65 2 23 136 98 210 1.62e-21 91.3
MS.gene53562.t1 AT1G26780 42.593 108 59 2 20 126 95 200 2.23e-21 92.0
MS.gene53562.t1 AT1G73410 45.714 105 54 2 23 126 6 108 3.08e-21 89.7
MS.gene53562.t1 AT1G73410 45.714 105 54 2 23 126 6 108 4.83e-21 88.2
MS.gene53562.t1 AT1G22640 65.517 58 20 0 67 124 1 58 5.02e-21 88.2
MS.gene53562.t1 AT1G66380 55.844 77 34 0 48 124 2 78 5.65e-21 85.5
MS.gene53562.t1 AT3G23250 55.556 72 32 0 67 138 1 72 7.99e-21 88.2
MS.gene53562.t1 AT5G14750 60.345 58 23 0 67 124 1 58 5.66e-20 84.0
MS.gene53562.t1 AT5G14750 60.345 58 23 0 67 124 1 58 5.66e-20 84.0
MS.gene53562.t1 AT3G29020 38.318 107 65 1 20 126 62 167 9.39e-20 85.5
MS.gene53562.t1 AT3G29020 38.318 107 65 1 20 126 64 169 1.82e-19 86.3
MS.gene53562.t1 AT1G14350 38.843 121 69 3 26 145 28 144 1.95e-19 87.4
MS.gene53562.t1 AT1G14350 38.843 121 69 3 26 145 28 144 1.95e-19 87.4
MS.gene53562.t1 AT4G33450 39.474 114 66 2 23 135 19 130 2.73e-19 84.7
MS.gene53562.t1 AT5G17800 37.500 120 71 2 7 126 80 195 3.99e-19 85.5
MS.gene53562.t1 AT2G02820 41.441 111 58 2 26 133 33 139 1.38e-18 84.0
MS.gene53562.t1 AT2G02820 41.441 111 58 2 26 133 33 139 1.81e-18 84.7
MS.gene53562.t1 AT2G02820 41.441 111 58 2 26 133 33 139 2.81e-18 84.3
MS.gene53562.t1 AT2G25230 42.105 95 52 2 26 119 29 121 3.81e-18 81.3
MS.gene53562.t1 AT1G71030 37.755 98 57 1 60 153 5 102 5.17e-18 79.7
MS.gene53562.t1 AT2G37630 40.594 101 57 2 26 124 7 106 7.35e-18 82.4
MS.gene53562.t1 AT1G71030 37.000 100 59 1 60 155 19 118 8.87e-18 79.3
MS.gene53562.t1 AT1G66380 50.000 80 40 0 22 101 9 88 1.34e-17 76.6
MS.gene53562.t1 AT1G18960 38.235 102 60 2 23 124 10 108 5.96e-17 79.0
MS.gene53562.t1 AT4G00540 41.509 106 56 3 23 124 103 206 3.58e-16 77.8
MS.gene53562.t1 AT4G00540 41.509 106 56 3 23 124 101 204 4.96e-16 77.4
MS.gene53562.t1 AT4G25560 30.899 178 112 4 79 246 2 178 1.96e-14 70.9
MS.gene53562.t1 AT5G39700 36.735 98 61 1 22 119 55 151 2.38e-14 70.1
MS.gene53562.t1 AT5G40430 38.776 98 56 3 23 119 54 148 1.16e-13 69.3
MS.gene53562.t1 AT1G14350 41.463 82 46 1 64 145 22 101 1.29e-12 67.4
MS.gene53562.t1 AT1G14350 41.463 82 46 1 64 145 22 101 1.29e-12 67.4
MS.gene53562.t1 AT3G18100 36.082 97 61 1 22 118 545 640 1.65e-11 64.3
MS.gene53562.t1 AT3G18100 36.082 97 61 1 22 118 497 592 1.67e-11 64.3
MS.gene53562.t1 AT3G18100 36.082 97 61 1 22 118 384 479 1.92e-11 64.3
MS.gene53562.t1 AT3G18100 36.082 97 61 1 22 118 332 427 2.17e-11 63.9
MS.gene53562.t1 AT5G61420 74.286 35 9 0 90 124 2 36 6.08e-11 61.6

Find 60 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTGATCATCTGTTGTATT+TGG 0.168813 1.2:+28505350 None:intergenic
GTTTGATGGTCTGTGGAATT+TGG 0.262122 1.2:-28505270 MS.gene53562:CDS
AACTCAGTTGCTAGGCTTAC+AGG 0.272684 1.2:-28506519 MS.gene53562:intron
ATTTCATTGTCTGTTCTTCC+TGG 0.287218 1.2:+28505629 None:intergenic
CCATGATACCATGACCAATT+TGG 0.296887 1.2:+28506631 None:intergenic
CATGTTGAAAATTTCTTGTC+TGG 0.326162 1.2:+28505376 None:intergenic
GAAGATGATAGTTTGTTTGA+TGG 0.331186 1.2:-28505284 MS.gene53562:CDS
CTATCATCTTCTGTTGCATT+AGG 0.338553 1.2:+28505296 None:intergenic
ACAATGAAATAAAGAATTAC+TGG 0.345073 1.2:-28505616 MS.gene53562:CDS
ACATTTGATTCTACATGTAT+TGG 0.353073 1.2:-28506671 None:intergenic
TCCAAATACAACAGATGATC+AGG 0.360219 1.2:-28505351 MS.gene53562:CDS
ATAACTGCTTTCTCAGAAAT+CGG 0.374451 1.2:+28505534 None:intergenic
CAGGGTTACTTTATGCTCAA+TGG 0.388112 1.2:-28505332 MS.gene53562:CDS
TGTCTGGCTTGAGATATATA+AGG 0.396316 1.2:+28505392 None:intergenic
ATCTAAGACCTGATCTCAAA+AGG 0.406655 1.2:-28506022 MS.gene53562:CDS
GGTTGTTGATTGACTATGTT+AGG 0.410992 1.2:-28506563 MS.gene53562:CDS
GAGATATATAAGGAATTCTA+TGG 0.419104 1.2:+28505402 None:intergenic
AATATTATGCTTTCTTCTTG+TGG 0.423745 1.2:+28505987 None:intergenic
TTCATGCTAGGTGGGGAAAC+AGG 0.426004 1.2:-28505959 MS.gene53562:intron
TCTAAGACCTGATCTCAAAA+GGG 0.452488 1.2:-28506021 MS.gene53562:CDS
TATTGTGAATAGGATTGAAA+AGG 0.465627 1.2:-28506079 MS.gene53562:intron
GGAGTGATGGCAGGCCAAAT+TGG 0.469256 1.2:-28506645 MS.gene53562:CDS
TCCATTTGATGCTTCCGAAA+AGG 0.471438 1.2:-28505564 MS.gene53562:CDS
GTATCATGGAGGAAGAGGTT+TGG 0.478271 1.2:-28506617 MS.gene53562:CDS
CCAAATTGGTCATGGTATCA+TGG 0.489340 1.2:-28506631 MS.gene53562:CDS
TGAATAGGATTGAAAAGGAA+TGG 0.493359 1.2:-28506074 MS.gene53562:intron
ACAACAACTGCAATTCAACT+TGG 0.507410 1.2:-28505465 MS.gene53562:CDS
TCTAAGTAAAACTAACAGTA+AGG 0.510800 1.2:+28505179 None:intergenic
GGCTGCATGGTGAAGGCAGA+TGG 0.514412 1.2:-28506542 MS.gene53562:CDS
GAGGAAGAGGTTTGGAGGAA+AGG 0.515111 1.2:-28506609 MS.gene53562:CDS
ATGGAAAGAGTTGCAGATTG+AGG 0.519759 1.2:-28506055 MS.gene53562:CDS
ATTAGAGCTTCATGCTAGGT+GGG 0.524194 1.2:-28505967 MS.gene53562:CDS
TCATGGTATCATGGAGGAAG+AGG 0.529376 1.2:-28506622 MS.gene53562:CDS
TGGAATTTGGATGATGTTCA+AGG 0.535682 1.2:-28505257 MS.gene53562:CDS
TCATGGAGGAAGAGGTTTGG+AGG 0.542638 1.2:-28506614 MS.gene53562:CDS
ATTGACTATGTTAGGCTGCA+TGG 0.543560 1.2:-28506555 MS.gene53562:CDS
AGGTGTCATGTCCATGTTTG+AGG 0.551244 1.2:-28505435 MS.gene53562:CDS
CATGGACTGCTGAAGAGGAT+AGG 0.552283 1.2:-28506584 MS.gene53562:CDS
ATAGTTTGTTTGATGGTCTG+TGG 0.553505 1.2:-28505277 MS.gene53562:CDS
GCTAATGCAACAAACAAAGC+TGG 0.555726 1.2:-28505221 MS.gene53562:CDS
CAATTCAACTTGGACATGAA+AGG 0.556323 1.2:-28505455 MS.gene53562:CDS
CTATCCTCTTCAGCAGTCCA+TGG 0.557457 1.2:+28506585 None:intergenic
CATGTATTGGCGTGGAGTGA+TGG 0.557598 1.2:-28506658 MS.gene53562:CDS
ACAATTGCAAGAAGTTTACC+AGG 0.565868 1.2:-28505647 MS.gene53562:CDS
GCAGATGGAACTCAGTTGCT+AGG 0.568807 1.2:-28506527 MS.gene53562:CDS
TATTGGCGTGGAGTGATGGC+AGG 0.570660 1.2:-28506654 MS.gene53562:CDS
AGGACCATGGACTGCTGAAG+AGG 0.572659 1.2:-28506589 MS.gene53562:CDS
TATTAGAGCTTCATGCTAGG+TGG 0.600065 1.2:-28505968 MS.gene53562:CDS
TAATATTAGAGCTTCATGCT+AGG 0.601475 1.2:-28505971 MS.gene53562:CDS
TGATTCTACATGTATTGGCG+TGG 0.606123 1.2:-28506666 None:intergenic
TATGTTAGGCTGCATGGTGA+AGG 0.611355 1.2:-28506549 MS.gene53562:CDS
ATGGCAGGCCAAATTGGTCA+TGG 0.615150 1.2:-28506639 MS.gene53562:CDS
TTAGAGCTTCATGCTAGGTG+GGG 0.621689 1.2:-28505966 MS.gene53562:CDS
CTAAGACCTGATCTCAAAAG+GGG 0.623043 1.2:-28506020 MS.gene53562:CDS
AAAGAGTTGCAGATTGAGGT+GGG 0.627035 1.2:-28506051 MS.gene53562:CDS
GAAAGAGTTGCAGATTGAGG+TGG 0.638530 1.2:-28506052 MS.gene53562:CDS
AGGTTTGGAGGAAAGGACCA+TGG 0.648109 1.2:-28506602 MS.gene53562:CDS
CCAAATACAACAGATGATCA+GGG 0.652014 1.2:-28505350 MS.gene53562:CDS
ATGAAATAAAGAATTACTGG+AGG 0.671820 1.2:-28505613 MS.gene53562:CDS
AATTGGTCATGGTATCATGG+AGG 0.749718 1.2:-28506628 MS.gene53562:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAAAAAAATATATGTTG+CGG - chr1.2:28505623-28505642 MS.gene53562:CDS 15.0%
!! CTGAAAATTTACAAATTTAT+TGG + chr1.2:28506173-28506192 None:intergenic 15.0%
!!! TAAATTTGTAAATTTTCAGA+TGG - chr1.2:28506174-28506193 MS.gene53562:intron 15.0%
!!! TTATTGTTTTTATTGTGAAT+AGG - chr1.2:28505758-28505777 MS.gene53562:intron 15.0%
!! ACAATGAAATAAAGAATTAC+TGG - chr1.2:28506231-28506250 MS.gene53562:intron 20.0%
! AACAAGAGTAGAAAAAAGAT+TGG + chr1.2:28505364-28505383 None:intergenic 25.0%
! AATATTATGCTTTCTTCTTG+TGG + chr1.2:28505863-28505882 None:intergenic 25.0%
! AATGTCTATGTTTCATATAC+TGG - chr1.2:28506121-28506140 MS.gene53562:intron 25.0%
! ATGAAATAAAGAATTACTGG+AGG - chr1.2:28506234-28506253 MS.gene53562:intron 25.0%
! ATGTAGCTCAAAAATATTTG+AGG + chr1.2:28505928-28505947 None:intergenic 25.0%
! GAGATATATAAGGAATTCTA+TGG + chr1.2:28506448-28506467 None:intergenic 25.0%
! TATAGTAGATAAGTTTCAAG+AGG - chr1.2:28505586-28505605 MS.gene53562:CDS 25.0%
! TATTGTGAATAGGATTGAAA+AGG - chr1.2:28505768-28505787 MS.gene53562:intron 25.0%
!! ATTTTATCTGCTATAGCAAT+AGG - chr1.2:28505536-28505555 MS.gene53562:CDS 25.0%
!!! GCTACATGTTTTTTTATGAT+TGG - chr1.2:28505941-28505960 MS.gene53562:intron 25.0%
ATAACTGCTTTCTCAGAAAT+CGG + chr1.2:28506316-28506335 None:intergenic 30.0%
CATGTTGAAAATTTCTTGTC+TGG + chr1.2:28506474-28506493 None:intergenic 30.0%
GCTAACAAAAAACTTGATCA+TGG + chr1.2:28505696-28505715 None:intergenic 30.0%
TAATATTAGAGCTTCATGCT+AGG - chr1.2:28505876-28505895 MS.gene53562:intron 30.0%
TATGTTTCATATACTGGCAA+AGG - chr1.2:28506127-28506146 MS.gene53562:intron 30.0%
TGAAACTTATCTACTATAGC+AGG + chr1.2:28505584-28505603 None:intergenic 30.0%
TGAATAGGATTGAAAAGGAA+TGG - chr1.2:28505773-28505792 MS.gene53562:intron 30.0%
!! AATAGTAGCATTGATAGTGA+TGG - chr1.2:28505477-28505496 MS.gene53562:CDS 30.0%
!! GAAGATGATAGTTTGTTTGA+TGG - chr1.2:28506563-28506582 MS.gene53562:CDS 30.0%
!!! TTTTTTTCATGTCTCTGCAA+TGG + chr1.2:28505613-28505632 None:intergenic 30.0%
ACAACAACTGCAATTCAACT+TGG - chr1.2:28506382-28506401 MS.gene53562:intron 35.0%
ACAATTGCAAGAAGTTTACC+AGG - chr1.2:28506200-28506219 MS.gene53562:intron 35.0%
ATTTCATTGTCTGTTCTTCC+TGG + chr1.2:28506221-28506240 None:intergenic 35.0%
CAATTCAACTTGGACATGAA+AGG - chr1.2:28506392-28506411 MS.gene53562:intron 35.0%
CCAAATACAACAGATGATCA+GGG - chr1.2:28506497-28506516 MS.gene53562:intron 35.0%
CTATCATCTTCTGTTGCATT+AGG + chr1.2:28506554-28506573 None:intergenic 35.0%
CTTATCTACTATAGCAGGTA+AGG + chr1.2:28505579-28505598 None:intergenic 35.0%
GTTTCTTGTAATAGCGATCA+AGG - chr1.2:28505381-28505400 MS.gene53562:CDS 35.0%
TCCAAATACAACAGATGATC+AGG - chr1.2:28506496-28506515 MS.gene53562:intron 35.0%
TGGAATTTGGATGATGTTCA+AGG - chr1.2:28506590-28506609 MS.gene53562:CDS 35.0%
! ACTCCTTCTATAAGAAGTGT+CGG + chr1.2:28505979-28505998 None:intergenic 35.0%
! ATCTAAGACCTGATCTCAAA+AGG - chr1.2:28505825-28505844 MS.gene53562:intron 35.0%
! GCTATTGTTTTCCTCAAACA+TGG + chr1.2:28506426-28506445 None:intergenic 35.0%
! GGTTGTTGATTGACTATGTT+AGG - chr1.2:28505284-28505303 MS.gene53562:CDS 35.0%
! TCTAAGACCTGATCTCAAAA+GGG - chr1.2:28505826-28505845 MS.gene53562:intron 35.0%
! TGTCTGGCTTGAGATATATA+AGG + chr1.2:28506458-28506477 None:intergenic 35.0%
!! AAATCGGTTTTTCGCCTTTT+CGG + chr1.2:28506300-28506319 None:intergenic 35.0%
!! ATAGTTTGTTTGATGGTCTG+TGG - chr1.2:28506570-28506589 MS.gene53562:CDS 35.0%
AAAGAGTTGCAGATTGAGGT+GGG - chr1.2:28505796-28505815 MS.gene53562:intron 40.0%
AACCCGACACTTCTTATAGA+AGG - chr1.2:28505973-28505992 MS.gene53562:CDS 40.0%
AATTGGTCATGGTATCATGG+AGG - chr1.2:28505219-28505238 MS.gene53562:CDS 40.0%
ATGGAAAGAGTTGCAGATTG+AGG - chr1.2:28505792-28505811 MS.gene53562:intron 40.0%
ATTAGAGCTTCATGCTAGGT+GGG - chr1.2:28505880-28505899 MS.gene53562:intron 40.0%
ATTGACTATGTTAGGCTGCA+TGG - chr1.2:28505292-28505311 MS.gene53562:CDS 40.0%
CCAAATTGGTCATGGTATCA+TGG - chr1.2:28505216-28505235 MS.gene53562:CDS 40.0%
CCATGATACCATGACCAATT+TGG + chr1.2:28505219-28505238 None:intergenic 40.0%
CCCTGATCATCTGTTGTATT+TGG + chr1.2:28506500-28506519 None:intergenic 40.0%
CTAAGACCTGATCTCAAAAG+GGG - chr1.2:28505827-28505846 MS.gene53562:intron 40.0%
GCTAATGCAACAAACAAAGC+TGG - chr1.2:28506626-28506645 MS.gene53562:CDS 40.0%
TATTAGAGCTTCATGCTAGG+TGG - chr1.2:28505879-28505898 MS.gene53562:intron 40.0%
TCCATTTGATGCTTCCGAAA+AGG - chr1.2:28506283-28506302 MS.gene53562:intron 40.0%
! ATTGTTGTTGTTGTTGCTGC+TGG + chr1.2:28506343-28506362 None:intergenic 40.0%
! CAGGGTTACTTTATGCTCAA+TGG - chr1.2:28506515-28506534 MS.gene53562:intron 40.0%
! GTTTGATGGTCTGTGGAATT+TGG - chr1.2:28506577-28506596 MS.gene53562:CDS 40.0%
!! AGTAGCATTGATAGTGATGG+TGG - chr1.2:28505480-28505499 MS.gene53562:CDS 40.0%
!! CTCCTTCTATAAGAAGTGTC+GGG + chr1.2:28505978-28505997 None:intergenic 40.0%
!! TGGCAAAGGTGTTTGAATCA+AGG - chr1.2:28506141-28506160 MS.gene53562:intron 40.0%
!!! ATTTGACCCCTTTTGAGATC+AGG + chr1.2:28505836-28505855 None:intergenic 40.0%
AACTCAGTTGCTAGGCTTAC+AGG - chr1.2:28505328-28505347 MS.gene53562:CDS 45.0%
CAATGCGTCAGTGTCGTATT+TGG - chr1.2:28506094-28506113 MS.gene53562:intron 45.0%
CTCATTGGTCATGTCTACGA+TGG - chr1.2:28505504-28505523 MS.gene53562:CDS 45.0%
GAAAGAGTTGCAGATTGAGG+TGG - chr1.2:28505795-28505814 MS.gene53562:intron 45.0%
GCGGTTCAAATTGCTATCAC+AGG - chr1.2:28505642-28505661 MS.gene53562:CDS 45.0%
GTATCATGGAGGAAGAGGTT+TGG - chr1.2:28505230-28505249 MS.gene53562:CDS 45.0%
TATGTTAGGCTGCATGGTGA+AGG - chr1.2:28505298-28505317 MS.gene53562:CDS 45.0%
TCATGGTATCATGGAGGAAG+AGG - chr1.2:28505225-28505244 MS.gene53562:CDS 45.0%
TTAGAGCTTCATGCTAGGTG+GGG - chr1.2:28505881-28505900 MS.gene53562:intron 45.0%
! AGGTGTCATGTCCATGTTTG+AGG - chr1.2:28506412-28506431 MS.gene53562:intron 45.0%
!! GATAGTGATGGTGGTCTCAT+TGG - chr1.2:28505489-28505508 MS.gene53562:CDS 45.0%
!!! GCCTTTTCGGAAGCATCAAA+TGG + chr1.2:28506287-28506306 None:intergenic 45.0%
AGGTTTGGAGGAAAGGACCA+TGG - chr1.2:28505245-28505264 MS.gene53562:CDS 50.0%
ATGGCAGGCCAAATTGGTCA+TGG - chr1.2:28505208-28505227 MS.gene53562:CDS 50.0%
CTATCCTCTTCAGCAGTCCA+TGG + chr1.2:28505265-28505284 None:intergenic 50.0%
CTGACACCAACACGTCTTAC+TGG + chr1.2:28506004-28506023 None:intergenic 50.0%
GAGGAAGAGGTTTGGAGGAA+AGG - chr1.2:28505238-28505257 MS.gene53562:CDS 50.0%
GAGTCTCCAGTAAGACGTGT+TGG - chr1.2:28505995-28506014 MS.gene53562:CDS 50.0%
GCAGATGGAACTCAGTTGCT+AGG - chr1.2:28505320-28505339 MS.gene53562:CDS 50.0%
TCATGGAGGAAGAGGTTTGG+AGG - chr1.2:28505233-28505252 MS.gene53562:CDS 50.0%
TTCATGCTAGGTGGGGAAAC+AGG - chr1.2:28505888-28505907 MS.gene53562:intron 50.0%
! CAGTAAGACGTGTTGGTGTC+AGG - chr1.2:28506002-28506021 MS.gene53562:CDS 50.0%
! CATGGACTGCTGAAGAGGAT+AGG - chr1.2:28505263-28505282 MS.gene53562:CDS 50.0%
GGAGTGATGGCAGGCCAAAT+TGG - chr1.2:28505202-28505221 MS.gene53562:CDS 55.0%
TATTGGCGTGGAGTGATGGC+AGG - chr1.2:28505193-28505212 MS.gene53562:CDS 55.0%
! AGGACCATGGACTGCTGAAG+AGG - chr1.2:28505258-28505277 MS.gene53562:CDS 55.0%
GGCTGCATGGTGAAGGCAGA+TGG - chr1.2:28505305-28505324 MS.gene53562:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 28505190 28506679 28505190 ID=MS.gene53562
chr1.2 mRNA 28505190 28506679 28505190 ID=MS.gene53562.t1;Parent=MS.gene53562
chr1.2 exon 28506520 28506679 28506520 ID=MS.gene53562.t1.exon1;Parent=MS.gene53562.t1
chr1.2 CDS 28506520 28506679 28506520 ID=cds.MS.gene53562.t1;Parent=MS.gene53562.t1
chr1.2 exon 28505960 28506089 28505960 ID=MS.gene53562.t1.exon2;Parent=MS.gene53562.t1
chr1.2 CDS 28505960 28506089 28505960 ID=cds.MS.gene53562.t1;Parent=MS.gene53562.t1
chr1.2 exon 28505190 28505676 28505190 ID=MS.gene53562.t1.exon3;Parent=MS.gene53562.t1
chr1.2 CDS 28505190 28505676 28505190 ID=cds.MS.gene53562.t1;Parent=MS.gene53562.t1
Gene Sequence

>MS.gene53562

ATGTATTGGCGTGGAGTGATGGCAGGCCAAATTGGTCATGGTATCATGGAGGAAGAGGTTTGGAGGAAAGGACCATGGACTGCTGAAGAGGATAGGTTGTTGATTGACTATGTTAGGCTGCATGGTGAAGGCAGATGGAACTCAGTTGCTAGGCTTACAGGTAATTACAAACCAATCTTTTTTCTACTCTTGTTTCTTGTAATAGCGATCAAGGTTTTAAATTGCAGTTGCAGTAACTATTAAAGATATAGTTTGTTATCAATTAGATACTAGCTTACTATATCTCTAATAGTAGCATTGATAGTGATGGTGGTCTCATTGGTCATGTCTACGATGGATCTCTTGAATTTTATCTGCTATAGCAATAGGAAGTTAACATAATATTTCCTTACCTGCTATAGTAGATAAGTTTCAAGAGGTCCATTGCAGAGACATGAAAAAAAATATATGTTGCGGTTCAAATTGCTATCACAGGAAAGTTGCTTATAACTTGTACTCTTCAACCATGATCAAGTTTTTTGTTAGCTGTTTATTTTTCAACTATGATCAAGTTGTTATGTAGCTTAATTTATTGTTTTTATTGTGAATAGGATTGAAAAGGAATGGAAAGAGTTGCAGATTGAGGTGGGTGAATTATCTAAGACCTGATCTCAAAAGGGGTCAAATAACACCACAAGAAGAAAGCATAATATTAGAGCTTCATGCTAGGTGGGGAAACAGGTAAATTTCTTAAATCCTCAAATATTTTTGAGCTACATGTTTTTTTATGATTGGCAATTAAGTAACCCGACACTTCTTATAGAAGGAGTCTCCAGTAAGACGTGTTGGTGTCAGGTAGTGACATGACACTAACACATATAAATATATTCAATTAATTCAACTATTCAAATCATTATCTGTGTATCAATGCGTCAGTGTCGTATTTGGTGTCAATGTCTATGTTTCATATACTGGCAAAGGTGTTTGAATCAAGGACTTGACCAATAAATTTGTAAATTTTCAGATGGTCAACAATTGCAAGAAGTTTACCAGGAAGAACAGACAATGAAATAAAGAATTACTGGAGGACTCATTTCAAGAAAAAAGCAAAAAATCCATTTGATGCTTCCGAAAAGGCGAAAAACCGATTTCTGAGAAAGCAGTTATTTCACCAGCAGCAACAACAACAACAATTGCAGCAGCAGCAGCAACAACAACAACTGCAATTCAACTTGGACATGAAAGGTGTCATGTCCATGTTTGAGGAAAACAATAGCCATAGAATTCCTTATATATCTCAAGCCAGACAAGAAATTTTCAACATGTATCCAAATACAACAGATGATCAGGGTTACTTTATGCTCAATGGAAACTCTTCTGTACCTAATGCAACAGAAGATGATAGTTTGTTTGATGGTCTGTGGAATTTGGATGATGTTCAAGGAAATTTCAGTGTTGCTAATGCAACAAACAAAGCTGGTCTATATAATTTAGTTGCTCCTTACTGTTAG
Protein sequence

>MS.gene53562.t1

MYWRGVMAGQIGHGIMEEEVWRKGPWTAEEDRLLIDYVRLHGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDLKRGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKNPFDASEKAKNRFLRKQLFHQQQQQQQLQQQQQQQQLQFNLDMKGVMSMFEENNSHRIPYISQARQEIFNMYPNTTDDQGYFMLNGNSSVPNATEDDSLFDGLWNLDDVQGNFSVANATNKAGLYNLVAPYC