AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54560.t1 MTR_4g067160 95.613 661 9 3 1 642 76 735 0.0 1292
MS.gene54560.t1 MTR_5g024510 26.490 302 178 14 351 630 364 643 6.22e-15 79.0
MS.gene54560.t1 MTR_5g024510 26.490 302 178 14 351 630 486 765 8.56e-15 78.6
MS.gene54560.t1 MTR_8g073190 32.275 189 102 8 460 632 532 710 1.18e-14 78.2
MS.gene54560.t1 MTR_4g007750 24.281 313 170 9 344 639 1 263 1.28e-13 72.8
MS.gene54560.t1 MTR_4g107490 26.102 295 160 11 351 630 77 328 3.33e-13 73.2
MS.gene54560.t1 MTR_8g095440 25.424 295 162 10 351 630 34 285 3.46e-13 72.8
MS.gene54560.t1 MTR_8g095440 25.249 301 159 11 351 632 34 287 4.19e-13 72.0
MS.gene54560.t1 MTR_2g078740 24.573 293 173 6 347 632 15 266 5.00e-13 72.8
MS.gene54560.t1 MTR_2g078740 24.573 293 173 6 347 632 15 266 5.13e-13 72.8
MS.gene54560.t1 MTR_2g078740 24.573 293 173 6 347 632 15 266 5.40e-13 72.8
MS.gene54560.t1 MTR_1g055255 25.478 314 185 12 328 630 104 379 1.46e-12 70.9
MS.gene54560.t1 MTR_5g024510 25.939 293 173 14 351 621 486 756 2.83e-12 70.5
MS.gene54560.t1 MTR_1g101630 24.567 289 182 9 381 639 20 302 3.99e-12 69.3
MS.gene54560.t1 MTR_3g040810 25.820 244 146 8 340 574 16 233 1.37e-11 67.8
MS.gene54560.t1 MTR_3g040520 25.410 244 147 8 340 574 18 235 3.16e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54560.t1 AT3G59410 59.463 671 242 6 1 643 73 741 0.0 756
MS.gene54560.t1 AT3G59410 59.463 671 242 6 1 643 73 741 0.0 756
MS.gene54560.t1 AT3G59410 59.463 671 242 6 1 643 97 765 0.0 756
MS.gene54560.t1 AT3G59410 59.463 671 242 6 1 643 73 741 0.0 756
MS.gene54560.t1 AT3G59410 59.584 673 239 8 1 643 73 742 0.0 755
MS.gene54560.t1 AT3G54180 25.402 311 167 10 344 639 1 261 4.68e-15 77.0
MS.gene54560.t1 AT2G38620 23.962 313 171 11 344 639 1 263 4.46e-14 73.9
MS.gene54560.t1 AT2G38620 25.610 246 134 9 344 572 1 214 3.53e-13 70.5
MS.gene54560.t1 AT2G38620 25.610 246 134 9 344 572 1 214 3.53e-13 70.5
MS.gene54560.t1 AT5G19360 24.662 296 163 10 351 630 72 323 3.91e-13 72.8
MS.gene54560.t1 AT1G12580 24.832 298 160 8 353 632 50 301 1.75e-12 70.9
MS.gene54560.t1 AT1G49180 31.250 176 107 6 456 619 78 251 4.51e-12 68.9
MS.gene54560.t1 AT1G49180 34.646 127 76 3 456 576 78 203 5.22e-12 68.6
MS.gene54560.t1 AT5G24360 33.750 160 85 7 486 630 594 747 4.20e-11 66.6
MS.gene54560.t1 AT5G24360 33.750 160 85 7 486 630 588 741 4.22e-11 66.6
MS.gene54560.t1 AT5G24360 33.750 160 85 7 486 630 574 727 4.27e-11 66.6

Find 154 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAACAGAGCTGTACAATTT+AGG 0.134939 4.3:-37220307 MS.gene54560:CDS
CATCCAGAATATCTCAATTT+TGG 0.149788 4.3:-37220001 MS.gene54560:CDS
GTGCCAAACCTTCTACTATT+TGG 0.235886 4.3:+37216271 None:intergenic
CAACAGAGCTGTACAATTTA+GGG 0.267102 4.3:-37220306 MS.gene54560:CDS
TGTCCAAAATTGAGATATTC+TGG 0.277987 4.3:+37219998 None:intergenic
TTCTGACTCGGCACGTGATA+TGG 0.282507 4.3:-37220174 MS.gene54560:CDS
TTCTCCGACAGTATCTAATT+TGG 0.283657 4.3:+37221567 None:intergenic
ATTAAATTCACCTTAATATT+CGG 0.285573 4.3:+37219451 None:intergenic
CTATGGAGAGTCCTGGAATT+GGG 0.290457 4.3:-37221728 MS.gene54560:CDS
TTGAGCTTTGGCATCCATTT+GGG 0.294228 4.3:-37215435 MS.gene54560:CDS
TAAATAGGTCATGGTGGTTT+TGG 0.296967 4.3:-37219558 MS.gene54560:intron
GAGTCCTGGAATTGGGGTTT+TGG 0.314175 4.3:-37221721 MS.gene54560:CDS
GATTCAGTTGGTTTGGCAAT+AGG 0.318107 4.3:+37222133 None:intergenic
GCAAGCTCCAATGATGCTAT+TGG 0.323573 4.3:-37217731 MS.gene54560:CDS
TGGACACCTTCTTCTGATCT+TGG 0.327775 4.3:-37219981 MS.gene54560:CDS
TTTGAGCTTTGGCATCCATT+TGG 0.330708 4.3:-37215436 MS.gene54560:CDS
ACATGTTGTTCGGTATTATC+AGG 0.331570 4.3:-37218065 MS.gene54560:intron
CCAAGCTTCTATTCGTGGTT+TGG 0.336668 4.3:+37221642 None:intergenic
CGCAGCAAGGATTCCTGTTC+TGG 0.337604 4.3:+37215334 None:intergenic
GCATGCCTGACCGAATATTA+AGG 0.342152 4.3:-37219461 MS.gene54560:intron
TCCCTCCCTAGCATTTAAAT+TGG 0.342928 4.3:+37222213 None:intergenic
CGCCTTGTTTGTGCCTCTAA+AGG 0.347600 4.3:-37220358 MS.gene54560:CDS
TGAATTGTGTCCCAAGGATA+TGG 0.368428 4.3:-37221806 MS.gene54560:CDS
CTCAAGCCCAATAGCATCAT+TGG 0.369085 4.3:+37217724 None:intergenic
TTTGTCTCTCCTCCTTGATC+AGG 0.372085 4.3:-37222373 MS.gene54560:intron
TTCCAGGCATGGTTTGAAAC+TGG 0.374951 4.3:-37217827 MS.gene54560:intron
TTGTTTCGCCAAATAGTAGA+AGG 0.376729 4.3:-37216279 MS.gene54560:CDS
AAGCGAAGTTTCCACCTTCA+TGG 0.382307 4.3:-37215369 MS.gene54560:CDS
TTCAGCCAAGTTCTTGAAGT+TGG 0.382689 4.3:-37215711 MS.gene54560:intron
GCTCACAGATTCAGTTGGTT+TGG 0.387662 4.3:+37222126 None:intergenic
TTTCTATTGTTTGAGATGCT+TGG 0.388882 4.3:+37220492 None:intergenic
TAGATCTCTGGTGGATGCTT+TGG 0.396434 4.3:-37221500 MS.gene54560:CDS
CTCTAATGACATGGGTTATG+AGG 0.398183 4.3:-37222940 None:intergenic
AATGAAGAAAATTCGCCTTA+AGG 0.409579 4.3:-37219490 MS.gene54560:CDS
GATTCTTGTGGTGATCCTGC+TGG 0.412130 4.3:-37217797 MS.gene54560:CDS
TTTCCGCTCTTCTTGTTGTC+AGG 0.412156 4.3:-37222908 MS.gene54560:intron
GCTATGGAGAGTCCTGGAAT+TGG 0.412214 4.3:-37221729 MS.gene54560:CDS
TTTGAAGATGCCATATCCTT+GGG 0.413569 4.3:+37221796 None:intergenic
ATTTGAAGATGCCATATCCT+TGG 0.414251 4.3:+37221795 None:intergenic
AATAGAAAAGGATCTAATAA+TGG 0.415727 4.3:-37220477 MS.gene54560:intron
ACAACTGGAGTTTCCATTGA+TGG 0.419034 4.3:-37215653 MS.gene54560:CDS
TACAACATCAACATGTTGTT+CGG 0.419219 4.3:-37218075 MS.gene54560:CDS
TCGCCAAATAGTAGAAGGTT+TGG 0.420863 4.3:-37216274 MS.gene54560:CDS
TTTGGAGGCATCTAACTTAG+AGG 0.420919 4.3:+37221660 None:intergenic
GTTCTTGAAGTTGGAGCAGC+TGG 0.424118 4.3:-37215702 MS.gene54560:CDS
AATTCCAAAACCCCAATTCC+AGG 0.427210 4.3:+37221717 None:intergenic
CAAGCTCCAATGATGCTATT+GGG 0.428086 4.3:-37217730 MS.gene54560:CDS
GTCAGCCAAGGTACCTTTAG+AGG 0.429848 4.3:+37220345 None:intergenic
ATTCTTGTGGTGATCCTGCT+GGG 0.432238 4.3:-37217796 MS.gene54560:CDS
TCCACGAATGGAGTCTGAAT+TGG 0.432451 4.3:-37215245 MS.gene54560:CDS
GAAGTTCTTGCAATATGAAC+GGG 0.434216 4.3:+37221593 None:intergenic
CTGCTCCAACTTCAAGAACT+TGG 0.437353 4.3:+37215706 None:intergenic
GGTTGCTGAGTTTCCAGAAC+AGG 0.440799 4.3:-37215347 MS.gene54560:CDS
AACTCATTCAAGTAGATCTC+TGG 0.442100 4.3:-37221512 MS.gene54560:CDS
ACACCTTCTTCTGATCTTGG+AGG 0.446526 4.3:-37219978 MS.gene54560:CDS
ATTCACCTTAATATTCGGTC+AGG 0.446642 4.3:+37219456 None:intergenic
AACATATCTTTATATACAAA+TGG 0.451751 4.3:-37217687 MS.gene54560:CDS
ATGGCCTAAGATTGATGAAA+AGG 0.454759 4.3:-37215579 MS.gene54560:intron
TACAGCTCTGTTGCTAATTG+AGG 0.456911 4.3:+37220316 None:intergenic
AGCTTCTATTCGTGGTTTGG+AGG 0.457162 4.3:+37221645 None:intergenic
CTCTGGTGGATGCTTTGGTA+GGG 0.457549 4.3:-37221495 MS.gene54560:CDS
TCCAGGCCAATTTAAATGCT+AGG 0.461777 4.3:-37222219 MS.gene54560:intron
TCGGGAGTAATCTGCAACTT+GGG 0.462634 4.3:+37222429 None:intergenic
GATTATATGATTCAAACATC+TGG 0.463611 4.3:+37216328 None:intergenic
CTCGGGAGTAATCTGCAACT+TGG 0.466932 4.3:+37222428 None:intergenic
GGCCATCCTTGCTCAATCTC+AGG 0.468999 4.3:+37215596 None:intergenic
GCCCATCCTGCTGATACAAC+TGG 0.470509 4.3:-37215668 MS.gene54560:CDS
AACTTGTCCAGTGCCATCAA+TGG 0.472833 4.3:+37215640 None:intergenic
AGCATCTCAAACAATAGAAA+AGG 0.478262 4.3:-37220489 MS.gene54560:CDS
TTTGAGGAGCTACGCCCTCT+TGG 0.478498 4.3:-37219915 MS.gene54560:intron
AGCGAAGTTTCCACCTTCAT+GGG 0.484273 4.3:-37215368 MS.gene54560:CDS
GGAGTTCTTGATTCCCCAGC+AGG 0.484376 4.3:+37217782 None:intergenic
CTCTCCATTGCAGTCCCAAA+TGG 0.491843 4.3:+37215421 None:intergenic
CCAGGCCAATTTAAATGCTA+GGG 0.496194 4.3:-37222218 MS.gene54560:intron
TCTCTGGTGGATGCTTTGGT+AGG 0.498599 4.3:-37221496 MS.gene54560:CDS
AGACAAAAGTTTATTAGCAT+CGG 0.500837 4.3:+37222389 None:intergenic
CAGGCTGACATGTACAGCTT+AGG 0.501324 4.3:-37215469 MS.gene54560:CDS
CCAAACCACGAATAGAAGCT+TGG 0.505145 4.3:-37221642 MS.gene54560:CDS
CTGCGGCAGTTAATGTCTCC+AGG 0.505896 4.3:-37215316 MS.gene54560:CDS
GAAGGTTTGGCACACATACA+TGG 0.508183 4.3:-37216261 MS.gene54560:CDS
GGAGTTTCCATTGATGGCAC+TGG 0.509434 4.3:-37215647 MS.gene54560:CDS
TATGGAGAGTCCTGGAATTG+GGG 0.514589 4.3:-37221727 MS.gene54560:CDS
TGTTGCAGACGGGCGATCTG+AGG 0.515657 4.3:+37215291 None:intergenic
CCGACAGTATCTAATTTGGC+AGG 0.517669 4.3:+37221571 None:intergenic
ATTGATGGCACTGGACAAGT+TGG 0.517938 4.3:-37215638 MS.gene54560:CDS
CAAACCACGAATAGAAGCTT+GGG 0.518812 4.3:-37221641 MS.gene54560:CDS
ACTCTCCATAGCCACTGAAA+AGG 0.525018 4.3:+37221740 None:intergenic
CTCCTGAGATTGAGCAAGGA+TGG 0.525511 4.3:-37215598 MS.gene54560:CDS
TGCAAAAGTTCTGTTGCAGA+CGG 0.527373 4.3:+37215280 None:intergenic
TCCAGTTGTATCAGCAGGAT+GGG 0.528959 4.3:+37215667 None:intergenic
TTGCAGATTACTCCCGAGAT+GGG 0.529753 4.3:-37222423 MS.gene54560:CDS
ACCAATTCAGACTCCATTCG+TGG 0.530139 4.3:+37215244 None:intergenic
GCATCCATTTGGGACTGCAA+TGG 0.531216 4.3:-37215425 MS.gene54560:CDS
TGTTACTTGGTGTTAAGTCC+CGG 0.535287 4.3:+37216223 None:intergenic
CTTCGCTTTCTGTTTCAGAT+CGG 0.535427 4.3:+37215384 None:intergenic
GACGGGCGATCTGAGGGACC+TGG 0.537153 4.3:+37215298 None:intergenic
AACAGGCAAGCACCTGATCA+AGG 0.539948 4.3:+37222361 None:intergenic
TTTCTTGAAGATATGATCAA+AGG 0.540567 4.3:+37220121 None:intergenic
TTGATGGCACTGGACAAGTT+GGG 0.541943 4.3:-37215637 MS.gene54560:CDS
TTGTGCCTCTAAAGGTACCT+TGG 0.542041 4.3:-37220350 MS.gene54560:CDS
GTTGCAGATTACTCCCGAGA+TGG 0.547558 4.3:-37222424 MS.gene54560:CDS
GCAAAAGTTCTGTTGCAGAC+GGG 0.549592 4.3:+37215281 None:intergenic
GTTTGTGATAAACCCATCTC+GGG 0.555876 4.3:+37222411 None:intergenic
CTCCAGTTGTATCAGCAGGA+TGG 0.556693 4.3:+37215666 None:intergenic
CGACAATGAAGGTGAGAAAG+AGG 0.557508 4.3:-37221470 MS.gene54560:intron
GGTTTGTGATAAACCCATCT+CGG 0.560922 4.3:+37222410 None:intergenic
ATGGGCAAGGAATAATTCAC+CGG 0.561143 4.3:-37216242 MS.gene54560:CDS
GTTGCAGACGGGCGATCTGA+GGG 0.563114 4.3:+37215292 None:intergenic
TACAAATGGAGTACTGTCCC+AGG 0.564051 4.3:-37217673 MS.gene54560:intron
TCAGTGGCTATGGAGAGTCC+TGG 0.564268 4.3:-37221735 MS.gene54560:CDS
TGACATGGGTTATGAGGATG+TGG 0.564466 4.3:-37222934 None:intergenic
ACGAATGGAGTCTGAATTGG+TGG 0.564484 4.3:-37215242 MS.gene54560:CDS
GATGATCTTTAATTTAGTTG+AGG 0.566294 4.3:-37222185 MS.gene54560:CDS
TGCAACTTGGGACACTTGAA+AGG 0.569087 4.3:+37222441 None:intergenic
GGAAGTTCTTGCAATATGAA+CGG 0.569290 4.3:+37221592 None:intergenic
GAAACTCCAGTTGTATCAGC+AGG 0.570373 4.3:+37215662 None:intergenic
GAATGCATTTCCTCCACGAA+TGG 0.573668 4.3:-37215257 MS.gene54560:CDS
AGTAAGCTCACAGATTCAGT+TGG 0.574686 4.3:+37222121 None:intergenic
GAGGCATCTAACTTAGAGGA+AGG 0.577615 4.3:+37221664 None:intergenic
GTTTGAGATGCTTGGTGATG+AGG 0.577776 4.3:+37220500 None:intergenic
TCTGGTGGATGCTTTGGTAG+GGG 0.581878 4.3:-37221494 MS.gene54560:CDS
GGAAACTCAGCAACCCATGA+AGG 0.582976 4.3:+37215355 None:intergenic
ATGAAGTTCCTTTACCAAGA+GGG 0.584316 4.3:+37219901 None:intergenic
TTGGTAGGGGACGACAATGA+AGG 0.588723 4.3:-37221481 MS.gene54560:CDS
TCATTCAAGTAGATCTCTGG+TGG 0.591402 4.3:-37221509 MS.gene54560:CDS
AACTCAGCAACCCATGAAGG+TGG 0.591480 4.3:+37215358 None:intergenic
GAGCCTCCAAGATCAGAAGA+AGG 0.592708 4.3:+37219975 None:intergenic
ACTTGAAAGGATACCCAGGC+AGG 0.598421 4.3:+37222454 None:intergenic
GGCCAATTTAAATGCTAGGG+AGG 0.603128 4.3:-37222215 MS.gene54560:CDS
TTCTTGTGGTGATCCTGCTG+GGG 0.608130 4.3:-37217795 MS.gene54560:CDS
GCCAATTTAAATGCTAGGGA+GGG 0.619171 4.3:-37222214 MS.gene54560:CDS
ACAGCTCCTGAGATTGAGCA+AGG 0.622634 4.3:-37215602 MS.gene54560:CDS
TATTTGGCGAAACAAATGCC+AGG 0.625503 4.3:+37216287 None:intergenic
TCATATCTTCAAGAAACACC+TGG 0.628086 4.3:-37220114 MS.gene54560:intron
TAGCTGAAAGTAGAGCTCGC+TGG 0.629194 4.3:+37217761 None:intergenic
CCTGCCAAATTAGATACTGT+CGG 0.629783 4.3:-37221571 MS.gene54560:CDS
AAGGTTTGGCACACATACAT+GGG 0.632113 4.3:-37216260 MS.gene54560:CDS
AGACATTAACTGCCGCAGCA+AGG 0.635803 4.3:+37215321 None:intergenic
CATAGATGAATTGTGTCCCA+AGG 0.637696 4.3:-37221812 MS.gene54560:CDS
TACCTTTAGAGGCACAAACA+AGG 0.642091 4.3:+37220356 None:intergenic
CAGAACAGGAATCCTTGCTG+CGG 0.657560 4.3:-37215333 MS.gene54560:CDS
ACTGGAGTTGCAGATTCTTG+TGG 0.658843 4.3:-37217809 MS.gene54560:CDS
AACAGAGCTGTACAATTTAG+GGG 0.661067 4.3:-37220305 MS.gene54560:intron
ATGGAGTCTGAATTGGTGGA+TGG 0.662386 4.3:-37215238 MS.gene54560:CDS
TGACATGTACAGCTTAGGAG+TGG 0.664023 4.3:-37215464 MS.gene54560:CDS
CATTTGGGACTGCAATGGAG+AGG 0.671627 4.3:-37215420 MS.gene54560:CDS
TTGGCACACATACATGGGCA+AGG 0.672832 4.3:-37216255 MS.gene54560:CDS
GGACACTTGAAAGGATACCC+AGG 0.680449 4.3:+37222450 None:intergenic
TTGAGGCAAAGAGTCAGCCA+AGG 0.682964 4.3:+37220333 None:intergenic
TGGGCAAGGAATAATTCACC+GGG 0.683427 4.3:-37216241 MS.gene54560:CDS
ATACCTGACAACAAGAAGAG+CGG 0.693866 4.3:+37222905 None:intergenic
ACAATGTAAATAGGTCATGG+TGG 0.696536 4.3:-37219564 MS.gene54560:intron
AATTCAGACTCCATTCGTGG+AGG 0.716408 4.3:+37215247 None:intergenic
AGGCAAGCACCTGATCAAGG+AGG 0.727142 4.3:+37222364 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.3 gene 37215231 37222952 37215231 ID=MS.gene54560
chr4.3 mRNA 37215231 37222952 37215231 ID=MS.gene54560.t1;Parent=MS.gene54560
chr4.3 exon 37222909 37222952 37222909 ID=MS.gene54560.t1.exon1;Parent=MS.gene54560.t1
chr4.3 CDS 37222909 37222952 37222909 ID=cds.MS.gene54560.t1;Parent=MS.gene54560.t1
chr4.3 exon 37222374 37222479 37222374 ID=MS.gene54560.t1.exon2;Parent=MS.gene54560.t1
chr4.3 CDS 37222374 37222479 37222374 ID=cds.MS.gene54560.t1;Parent=MS.gene54560.t1
chr4.3 exon 37222132 37222236 37222132 ID=MS.gene54560.t1.exon3;Parent=MS.gene54560.t1
chr4.3 CDS 37222132 37222236 37222132 ID=cds.MS.gene54560.t1;Parent=MS.gene54560.t1
chr4.3 exon 37221471 37221860 37221471 ID=MS.gene54560.t1.exon4;Parent=MS.gene54560.t1
chr4.3 CDS 37221471 37221860 37221471 ID=cds.MS.gene54560.t1;Parent=MS.gene54560.t1
chr4.3 exon 37220478 37220606 37220478 ID=MS.gene54560.t1.exon5;Parent=MS.gene54560.t1
chr4.3 CDS 37220478 37220606 37220478 ID=cds.MS.gene54560.t1;Parent=MS.gene54560.t1
chr4.3 exon 37220306 37220392 37220306 ID=MS.gene54560.t1.exon6;Parent=MS.gene54560.t1
chr4.3 CDS 37220306 37220392 37220306 ID=cds.MS.gene54560.t1;Parent=MS.gene54560.t1
chr4.3 exon 37220115 37220201 37220115 ID=MS.gene54560.t1.exon7;Parent=MS.gene54560.t1
chr4.3 CDS 37220115 37220201 37220115 ID=cds.MS.gene54560.t1;Parent=MS.gene54560.t1
chr4.3 exon 37219916 37220027 37219916 ID=MS.gene54560.t1.exon8;Parent=MS.gene54560.t1
chr4.3 CDS 37219916 37220027 37219916 ID=cds.MS.gene54560.t1;Parent=MS.gene54560.t1
chr4.3 exon 37219462 37219573 37219462 ID=MS.gene54560.t1.exon9;Parent=MS.gene54560.t1
chr4.3 CDS 37219462 37219573 37219462 ID=cds.MS.gene54560.t1;Parent=MS.gene54560.t1
chr4.3 exon 37218066 37218120 37218066 ID=MS.gene54560.t1.exon10;Parent=MS.gene54560.t1
chr4.3 CDS 37218066 37218120 37218066 ID=cds.MS.gene54560.t1;Parent=MS.gene54560.t1
chr4.3 exon 37217674 37217843 37217674 ID=MS.gene54560.t1.exon11;Parent=MS.gene54560.t1
chr4.3 CDS 37217674 37217843 37217674 ID=cds.MS.gene54560.t1;Parent=MS.gene54560.t1
chr4.3 exon 37216229 37216359 37216229 ID=MS.gene54560.t1.exon12;Parent=MS.gene54560.t1
chr4.3 CDS 37216229 37216359 37216229 ID=cds.MS.gene54560.t1;Parent=MS.gene54560.t1
chr4.3 exon 37215580 37215728 37215580 ID=MS.gene54560.t1.exon13;Parent=MS.gene54560.t1
chr4.3 CDS 37215580 37215728 37215580 ID=cds.MS.gene54560.t1;Parent=MS.gene54560.t1
chr4.3 exon 37215231 37215488 37215231 ID=MS.gene54560.t1.exon14;Parent=MS.gene54560.t1
chr4.3 CDS 37215231 37215488 37215231 ID=cds.MS.gene54560.t1;Parent=MS.gene54560.t1
Gene Sequence

>MS.gene54560

ATGGGTTATGAGGATGTGGATGTTTCCGCTCTTCTTGTTGTCAGGTATGTTATGTGATTTCTTCAGTTAGAACAACAACCTGTTCAAAAGAGTTAAAAATCAATAAGCACAAACAATGAACATCTGATATTTGTTAATGAAGTTTGGCCAATTATGCCTACGTCTCTGACTGCAGTTCCTTTGTGTTATCATTGAAAGATTAGGGTTTACAGTGTACACTTGTTAGTATTTATGAGCCATACTCAACAATTTTCACGAATCACACACTTCAGACATGACACTGACATGTAAACACCGATAACAGTTTAAGAAAATGGAAACGGTTTAATGTAATGTAAATGCATGTGTCCGAGTCTACCTTCAATCTGAAGTGTCTGTGCTACGTAGGTTGCTTTCTATTTTTGTTTCTGAAGAAGGGGATCTTTGTTGCTCTAAAGTCAATCATTGTTTTTCACTCTTTTCTTTTTGGCTAGGTGCCTGCCTGGGTATCCTTTCAAGTGTCCCAAGTTGCAGATTACTCCCGAGATGGGTTTATCACAAACCGATGCTAATAAACTTTTGTCTCTCCTCCTTGATCAGGTGCTTGCCTGTTCATTTGGCATTAACTATTGTTTCACAGTTAATTCGTGATGTATTCTTTGTTTGAGTGTGGCAAGGGAGATATATTCTTTGTTGTGTGTAAAATGTAGTGATCTTTTGTTCTTGCCATTTTCCAGGCCAATTTAAATGCTAGGGAGGGACGAGTGATGATCTTTAATTTAGTTGAGGCTGCTCAAGAATTTCTGTCTAGAATTGAGCCTATTGCCAAACCAACTGAATCTGTGAGCTTACTGTTTCTTACATACTATTTTCTGTTAAGCTATTGTAACTATTATTATTCATTCATTTTATTATTATTCACTGAAGGTTGTAATCATAAAATCAATATTAGTTAGTATTTTGTTTTTAAAAGAAAAGAATATTGTAGATGTCAGTGTTGATATTCTTTAATTTCTTATATAATTTTTGAGGTTTGATCAATCATTTATTTCTATGAAAAAGTTAATTTTCTACTTAAACTGATGGTGCTATGCTTCTATCCTCGGATTGTAGAAGTTTTCACACTCAACTACAGAGGGCATAGATGAATTGTGTCCCAAGGATATGGCATCTTCAAATAAGAATAGATCTTTTGTCTATGGTTTCATCGACCTTTTCAGTGGCTATGGAGAGTCCTGGAATTGGGGTTTTGGAATTGATGAACCTGCTGTAAAAATTTCTTCTCTTCCTTCCTCTAAGTTAGATGCCTCCAAACCACGAATAGAAGCTTGGGAAAAAAAATCTGATAGCAAGGAAAACCCGTTCATATTGCAAGAACTTCCTGCCAAATTAGATACTGTCGGAGAAGTTAGTGAAGACAATAACAATAGCTCAACTTTAACTCATTCAAGTAGATCTCTGGTGGATGCTTTGGTAGGGGACGACAATGAAGGTGAGAAAGAGGTAATGTAAAGGACATGATTTGCTTGTTGTAAGGGTCGTGTATTGTTTGTTGGACATCAGTAATTATTTTTTATTTTTTTACTTTTGTTCCTATATATCCTATGTTAAGAACTACTCTTGTTAAATTTATTATTTATAACCGGCCAGAATTATGTCGCTAACTGTTGAAGTTGACGAGTCTTTCAATGATTTTTGGACTTTTGGTATCTTGCTTTCCACCTGAACAAAAAAATGGTAATGATAATGGTCATGGATTTTTAGGAAAATGAGTTAAGCAATTTGATCAGATGGTGCACAATATTTGATGTAATTCCTGAAAGGTTTAATGCATTAGATTGTTGAATTTTAATTAAGCACACGAAGACGAACAATGCAGATCATGTAATTTAGAAGTTCTTAACCTTTGTTTTTGTCTGGATTTGTAGGTTTGACGTTTGAAATAATTGCGCAATAAATGAGTTAAAATCAGAAAAATGTTAATGTTATAGAGGGATGGAAATGTAATATATATGTCTGTGTATGTCATCCTATGTCAAGATATTATCATTGGTCCTGTCCTGATAGGAAAAGCCTTACCTTATTACTCTTTTTAAACCCAGACCTACCTGGATTTTTAGGCTCATACTGTTTATGCGAGAGTCCCAGGTTTGTTCAAATGAACTAATTAAAGATAACTCGAATTGACATATACGAGGAAATTCCTTGAATTGATGCAACATGCCTCTATTCTGATGGGAAATCATTCATGTTTCATTGAAATTTAGAAATTCTCTCATATTTTTTTGGCACCATTGTAATTGGTCTGCATCTGTTTGAGACACCTGTTTATGCCAATTCCTTTATTTTCTATCATTTCACATGCAGTATTTTATTGTGGATGAGTATACAACAGAAGATAACAAAGATATGTCTGACAGTGAGTCTACAGAGTCTCTATCTTCTGTGTCGCCTCATCACCAAGCATCTCAAACAATAGAAAAGGATCTAATAATGGTAAAAACTCAAAATTTACTGTTATCAGCTTGTCACAACAGATTTACGCTCAACATTAATTTTGTTTTTCCTTCTTTTGCATCAGGTTCACATGCTTCGCCTTGTTTGTGCCTCTAAAGGTACCTTGGCTGACTCTTTGCCTCAATTAGCAACAGAGCTGTACAATTTAGGGGTATAAACTAGATTGCTATTTTACCAAAACAATAATATTTTTACTCCTATTTTCAAATAATTTCCAGGTCTAGAATGATCCTAATCCTTTGAGTTGTATTCCAGATATTTTCTGACTCGGCACGTGATATGGCATCAAAACCACCTTCCCTTTTCAACAAAACCTTTGATCATATCTTCAAGAAACACCTGGTTGGCAAATCTTATGGGGAAATATACTCTCTTTCTTACCACTAAATTTTTGTTTATTTTTTTTTATTATTTATTTGTTTTGTCTAGGCATCATCCAGAATATCTCAATTTTGGACACCTTCTTCTGATCTTGGAGGCTCTAATACAGTTCAACACAGTTCTCGATATTTAAATGATTTTGAGGAGCTACGCCCTCTTGGTAAAGGAACTTCATGAACTTGTGTCGAGTTTTATATATATAATAATATAATAATATTCTTTGATGTCATATACTCCTAGATGTCTCCCATGATGATGGTAGACTACTATAATTTCTTTTTGTCGATGATCTTGATTGCCTGGCCTTTGTGTTTGCTGGAAAAGATAGCATGAATGATTGCCTGGCCTTTGTGTTTGCTGGAAAAGATAGCATGAATTATTATAGCTTTGGAAATGTTTTTAATCATTTCAATGAACTTTTTTATTAAAAGATGATTATTTAACTGGATTTTCTCATATCTCTAATCATTTACTGAAACATTTTGCTTGACAATGTAAATAGGTCATGGTGGTTTTGGTCACGTTGTGTTGTGCAAAAATAAACTCGATGGAAGGCAGTATGCAATGAAGAAAATTCGCCTTAAGGACAAAAGCATGCCTGACCGAATATTAAGGTGAATTTAATTGATCTAGGAAGGAACTTGCTACAGCTTTTTCACTAATGTATATAATTCAGTGCATGATTATGTAATTATGGCCAAAGCATTACATTTACAGTCATTGATTAATATTAGAATATTTACCTGATCCAGTTTTTGCAAATCTTCAATTTCTTTTTACAAAACGGGCTGTATTGTCATCTGCACTTTCTGATCCAACTCCTGCATGCTGTAGTTTATGATTAACTTTGGGTTGATGAAACATTTTGAAGCAGTAACCGTAACTGCTGTTGAAACTAAACTTTCTTCAGAATCCAAGGATTGATTTCGTTCTTTGACATAAGTTTTATTGGTCATACGGAAAGTATGATTGCGCTTAAAAACTTCATATTCTGATAAAAGTCTTAACTGTGGTGGTGTTTGAAGATGTATCCGTTACTAAGCATGTCAATTTGTCAACATTTTGATCAATTAATTTCTTTGCCACCCACCATTTTTTGGTCTACATAATTTATTGTAGGATTTCAACTAGACAACTAGGCATAACTTTGCATTTCATCTACCTGTATTAGATTCTGAGGTCGATCTTCGATCTTATTGTTACGTTAAATTATTGATCTCATTATTACAAAATATTTCCTCCTTCGGTTTTACTATTGCTTAACCTAAATATCTTTAAAATCTTGTATCTTAGTGTTCTCAAACTTATTGAAATCCTGTACAGCTGCATCAACTAGTATCCCCGTAGCTATATGTTAAATTATATTGAGGGAATCAAATATAATTTAGAGCCATTATTTGTTGATGACAAAAAATAGAGCTGATGTCTGATGTAGATCATAAAGCTAGAAGATAGGATTTGTGATGGAAGATGAATGCAGATTTAAAAGAGATTTGAAAAAGAAAAAAATTGTGAAAAGATATCATGGTCAATTTATTTAATTGGTGCTAATGTTTCGTTGCATAAAATTGAAATGACACGCAGAGGAGAATTTAAATTAAAACCAAGGGGAGGGCAAGTATGGCTTGTAAATAAGTATAAGTATACTTCATCTTTGCATCACACATGAACTTTTTTTATTGGCCAATTAGATTTCATGGTATACGTATGACATATCTTATGTATTGTCTCACCTCATGTTTTGATATAGTTCATTTTCCTTTATGTTGTTTGTCCTCCCCATTTCATTTTTTTTTTCTTGTGTTGAAAATTCTAAGAGAAAGAATATATTTATTTGATTACTGCCAGCTTTGCCCATTTCTTATCTTTTCTTACTGTTTATATGTAACTGTTTACTCGTTTTTTAATTACAATAACTTACTTGTTTATCCATCTATCTATGGTGAGAAAATCAGGGAAGTAGCTACGCTTTCTCGTTTACAACATCAACATGTTGTTCGGTATTATCAGGTATAAAGGTTTTTATTTTTTGCACAAATTTTCATATTATGGAAACTTTTGTTTCTTGTATCAGATTTTTTATTTCCTTATGTTGCTGCATTAACTGTATGCTCTAGTGCACAGTTTTTGGAAGAGTCTATGAATAGAAATGCAAATAAAATGTTTTAGTTTACCACAATATTATGTGGTCATATGATGGTTTTAAATTTTTAATAGCTGTAAAACTTCCAGGCATGGTTTGAAACTGGAGTTGCAGATTCTTGTGGTGATCCTGCTGGGGAATCAAGAACTCCAGCGAGCTCTACTTTCAGCTACAAAGCTGCAAGCTCCAATGATGCTATTGGGCTTGAGAATCAGCTTGAATCAACATATCTTTATATACAAATGGAGTACTGTCCCAGGTAAGATTTTCAGAGAGCTAAGTTCTTCATAATTATTTTCTCTTCTTATTGAACTTCTCCTTTTGTATTAGAAAAGAGGTCTTTCCTTTTGGCAGTTAATGTAGTATAATGACTAGTAAGTTTTGGACATGAAAGTCGGGGCATTTATAACTGAAGGAAATTTTTGTTGTTGTTGGGAACTTGGAGGCTCGAAAGTTGAAATATACTTTTCAATTGGAATTCATACAGTCTACATGTTTGTCCAGTCTCCACTTTCTTTGGCCGTGTTTTTATTTCCTGCTGCCGTTTCCAATAGGCTTCCTTCAATTCACTGCCACTGTACATCTCTAACTGTTGCTGCCAGCTTGTCAGTCTCAGTTTTCGTCCAGCCTTTCACTAGGTCTGGCTTGCAGTTGTTGGATCAAACCATCCTTAGATATCAAACACACCCACTTGTGCTCTTTCTCGCGTGTAACCTAACATTGCCGCCACTGTTTGCCGCACATTCCGACGAGTCTTTGTCAATATTTGTAGTGCTTGGTTTATACCTTACAATTATTTGTTTCCATATTTGTGCTATACTGCTATTTCTTACTTTTCTTTGTTGATTCACACCGAATTCTAATCCTCTGAAGTCTGATCCTTCCATTTTCACCAACTATATCAGTGCCCCACTGTCAACTGACAAGTTAGACAAAAAAAACTATAATATGTGGGCCTCCAACATCAAACTTTGCTTGAATTCTAGGAACATAAAGACTACCGCGCCAAGATGGTCGATTTTGTGCTTGAGCCCAACCGTTCTTATAAGATCGGTTGTTATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAAATAAAATAAAAAAAAAGAATAAGATTGGTTTTAGAATGAAGGTCTGAAGAGGTTACAGAGACGACACTCATTTTTGACAATCAGATTGCTCTGCACATATTCTCTCAAATCCAGCGTTCCATGAGAGGATCAAACATATTTAGGTATAGGTCATTATACTAGTTTTGTAAATTCAAATTATCAACTGGTAGAGGTCTTCACTAAAGATTGAAGGTCCTTGAATCAGTTATGTGTGTAACAAACTTGGTGTATGTCATTTATATGCTCCAGATGAGGGTGGCTGATAGAAGCAATGTAAATAGGGTACTTATAGGCTGATCTTGTGTTGTATATGATTGTTATTGTTATTGTTATTGTGTTTGTGTTTGTGTCTATTGTTTCATTTAATTCTTGACTCATGTATACAAAATTTCACAAGTACACTCATTATTGTTAATTATGTGGTATTCACTAAATGTCATTGTTGTGGGTTCAAAGGACTCTTCGCCAGATGTTTGAATCATATAATCATTTTGACAAAGAATTGGCCTGGCATTTGTTTCGCCAAATAGTAGAAGGTTTGGCACACATACATGGGCAAGGAATAATTCACCGGGACTTAACACCAAGTAACATATTCTTTGATGCTCGCCAATGATATTAAAATTGGTGACTTTGGTCTCGGTAAGATCTTCAATCCTTTAGTTACTTATTTTCTTTTTCTTCGTGTATGTTTCCAATATTTTTTCTATCTAGATTATCACAACAATGAACAACTTCAATATATGTGATTGGTGCTCATGAAATTATTAGAATATGTGATAGGCCTAGTAATCTGTAGGCTAGCAAGGTTTCCAATTGCATCCTGATTTGCATCTGCAAATTTTCATTTATCCATATAATTCTCTTTGTAATACAGTCGAGGTCATTAATAAATGCCTGCACTTATACACATTTTCCTGTGTGTGCAGTGACATTATGTAACTCTTGGTGTAGTGTTTCGCTGTTTCTGATTTGGTCTAAAAATTCATATAAAACAATGCCCTGTTAATGTGTGAGCTTTCTACACTGGAGGGAGTGGTGTTTGTTCATGAATGAATTCTCAAATTTTCTTTTCTTTTTCTTTCAGCCAAGTTCTTGAAGTTGGAGCAGCTGGATCAAGATCTAGCCCATCCTGCTGATACAACTGGAGTTTCCATTGATGGCACTGGACAAGTTGGGACATATTTCTATACAGCTCCTGAGATTGAGCAAGGATGGCCTAAGATTGATGAAAAGGTGTAAAGCATTCAGCACTATCCTTTATAGCCATATAACAATGTTTGCTTCGAGCAAAATTATGTAATTCTTGGGTTTAATTGATGTGCAGGCTGACATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCATCCATTTGGGACTGCAATGGAGAGGCACGTTGTTTTATCCGATCTGAAACAGAAAGCGAAGTTTCCACCTTCATGGGTTGCTGAGTTTCCAGAACAGGAATCCTTGCTGCGGCAGTTAATGTCTCCAGGTCCCTCAGATCGCCCGTCTGCAACAGAACTTTTGCAGAATGCATTTCCTCCACGAATGGAGTCTGAATTGGTGGATGGCAAGTGA
Protein sequence

>MS.gene54560.t1

MGYEDVDVSALLVVRCLPGYPFKCPKLQITPEMGLSQTDANKLLSLLLDQANLNAREGRVMIFNLVEAAQEFLSRIEPIAKPTESKFSHSTTEGIDELCPKDMASSNKNRSFVYGFIDLFSGYGESWNWGFGIDEPAVKISSLPSSKLDASKPRIEAWEKKSDSKENPFILQELPAKLDTVGEVSEDNNNSSTLTHSSRSLVDALVGDDNEGEKEYFIVDEYTTEDNKDMSDSESTESLSSVSPHHQASQTIEKDLIMVHMLRLVCASKGTLADSLPQLATELYNLGIFSDSARDMASKPPSLFNKTFDHIFKKHLASSRISQFWTPSSDLGGSNTVQHSSRYLNDFEELRPLGHGGFGHVVLCKNKLDGRQYAMKKIRLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETGVADSCGDPAGESRTPASSTFSYKAASSNDAIGLENQLESTYLYIQMEYCPRTLRQMFESYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPTKFLKLEQLDQDLAHPADTTGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKQKAKFPPSWVAEFPEQESLLRQLMSPGPSDRPSATELLQNAFPPRMESELVDGK