AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54581

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54581.t1 MTR_4g066460 80.635 315 23 5 1 286 24 329 3.26e-174 484
MS.gene54581.t1 MTR_4g066380 84.053 301 30 3 1 283 23 323 3.71e-173 481
MS.gene54581.t1 MTR_4g067010 78.317 309 27 4 1 283 24 318 5.31e-171 476
MS.gene54581.t1 MTR_6g047570 61.146 314 94 6 1 286 23 336 1.50e-121 351
MS.gene54581.t1 MTR_0011s0260 55.331 347 83 8 1 285 23 359 8.94e-109 319
MS.gene54581.t1 MTR_0011s0210 55.747 348 82 7 1 286 23 360 3.20e-108 318
MS.gene54581.t1 MTR_0250s0040 58.586 297 80 7 1 286 1 265 9.70e-106 308
MS.gene54581.t1 MTR_0246s0020 57.322 239 83 4 66 286 142 379 1.82e-81 251
MS.gene54581.t1 MTR_0246s0050 48.438 320 126 10 3 286 5 321 1.67e-79 243
MS.gene54581.t1 MTR_4g098035 48.438 320 126 10 3 286 26 342 3.84e-79 243
MS.gene54581.t1 MTR_0246s0020 53.917 217 81 4 66 264 142 357 1.33e-66 212
MS.gene54581.t1 MTR_5g014520 44.932 296 123 7 23 285 45 333 8.40e-62 199
MS.gene54581.t1 MTR_5g014560 42.809 299 128 11 3 285 36 307 1.17e-53 177
MS.gene54581.t1 MTR_6g047550 52.913 206 65 6 1 174 23 228 1.86e-53 175
MS.gene54581.t1 MTR_4g009540 41.667 204 98 6 100 282 128 331 4.46e-42 147
MS.gene54581.t1 MTR_5g014600 41.743 218 97 4 93 281 118 334 6.02e-42 147
MS.gene54581.t1 MTR_4g097920 39.130 207 110 4 85 280 108 309 7.49e-40 141
MS.gene54581.t1 MTR_2g010450 42.703 185 93 2 112 283 168 352 7.76e-40 142
MS.gene54581.t1 MTR_4g097920 39.130 207 110 4 85 280 123 324 1.07e-39 141
MS.gene54581.t1 MTR_8g009020 39.175 194 101 2 106 282 130 323 2.21e-39 140
MS.gene54581.t1 MTR_4g092700 39.614 207 103 3 93 283 132 332 8.61e-39 139
MS.gene54581.t1 MTR_4g097940 38.647 207 111 4 85 280 123 324 1.19e-38 138
MS.gene54581.t1 MTR_4g009110 37.872 235 120 7 70 282 120 350 1.30e-38 139
MS.gene54581.t1 MTR_4g097950 45.405 185 84 4 116 283 67 251 2.08e-38 135
MS.gene54581.t1 MTR_2g104550 39.409 203 111 3 95 285 113 315 6.09e-38 136
MS.gene54581.t1 MTR_2g104490 35.573 253 142 6 37 280 66 306 2.11e-37 135
MS.gene54581.t1 MTR_2g104650 39.583 240 123 8 56 279 33 266 3.93e-37 133
MS.gene54581.t1 MTR_5g014640 35.749 207 105 4 94 281 126 323 6.21e-36 131
MS.gene54581.t1 MTR_2g104560 38.421 190 105 5 105 283 38 226 9.77e-34 123
MS.gene54581.t1 MTR_4g009540 40.984 183 87 6 100 261 128 310 1.20e-33 125
MS.gene54581.t1 MTR_7g080780 37.864 206 124 3 78 282 114 316 1.63e-33 125
MS.gene54581.t1 MTR_7g080780 37.864 206 124 3 78 282 127 329 1.64e-33 125
MS.gene54581.t1 MTR_8g069740 42.690 171 82 5 105 260 96 265 2.05e-32 120
MS.gene54581.t1 MTR_8g009010 36.574 216 103 4 70 277 78 267 2.45e-32 121
MS.gene54581.t1 MTR_2g104530 37.297 185 106 4 105 281 91 273 1.96e-30 115
MS.gene54581.t1 MTR_2g104490 35.043 234 131 6 37 261 66 287 2.45e-30 115
MS.gene54581.t1 MTR_2g104500 34.975 203 108 5 103 282 71 272 9.18e-28 108
MS.gene54581.t1 MTR_4g009510 38.037 163 94 5 121 280 45 203 8.78e-27 104
MS.gene54581.t1 MTR_2g104590 34.597 211 100 8 86 279 32 221 1.11e-26 104
MS.gene54581.t1 MTR_7g451650 37.931 145 78 2 142 280 57 195 7.36e-24 96.3
MS.gene54581.t1 MTR_4g009420 39.568 139 76 2 142 280 65 195 6.41e-23 94.0
MS.gene54581.t1 MTR_7g050350 36.691 139 76 2 148 280 1 133 4.72e-22 89.7
MS.gene54581.t1 MTR_7g451650 36.691 139 76 2 148 280 1 133 4.72e-22 89.7
MS.gene54581.t1 MTR_5g014550 44.444 126 52 3 149 260 54 175 3.91e-20 86.3
MS.gene54581.t1 MTR_8g067280 30.120 166 85 2 111 245 444 609 1.25e-15 77.0
MS.gene54581.t1 MTR_7g451650 35.385 130 72 2 142 265 57 180 1.82e-15 73.6
MS.gene54581.t1 MTR_8g024790 26.050 238 142 8 34 238 187 423 9.24e-15 74.3
MS.gene54581.t1 MTR_4g009420 37.097 124 70 2 142 265 65 180 2.46e-14 70.5
MS.gene54581.t1 MTR_8g024770 29.333 150 77 4 93 218 248 392 2.93e-14 72.8
MS.gene54581.t1 MTR_1g072320 31.944 144 76 3 119 242 470 611 3.07e-14 73.2
MS.gene54581.t1 MTR_5g030430 50.685 73 32 1 104 172 474 546 1.06e-13 71.6
MS.gene54581.t1 MTR_7g117670 30.519 154 101 2 115 262 394 547 1.88e-13 70.5
MS.gene54581.t1 MTR_3g498695 28.324 173 104 2 120 272 299 471 2.64e-13 70.1
MS.gene54581.t1 MTR_3g498695 28.324 173 103 3 120 272 299 470 1.96e-12 67.4
MS.gene54581.t1 MTR_7g096350 36.082 97 52 1 86 172 312 408 2.28e-12 67.4
MS.gene54581.t1 MTR_8g027495 45.333 75 41 0 119 193 458 532 2.97e-12 67.0
MS.gene54581.t1 MTR_3g030700 32.258 155 90 3 121 260 198 352 4.12e-12 66.2
MS.gene54581.t1 MTR_8g064700 26.036 169 102 4 109 258 234 398 7.92e-12 65.5
MS.gene54581.t1 MTR_3g104100 27.742 155 92 3 121 255 197 351 6.67e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54581.t1 AT4G37850 42.079 202 96 7 100 283 129 327 2.40e-37 135
MS.gene54581.t1 AT4G37850 42.079 202 96 7 100 283 129 327 2.40e-37 135
MS.gene54581.t1 AT2G22760 38.298 188 102 4 108 281 108 295 6.71e-36 130
MS.gene54581.t1 AT2G22750 40.625 192 90 4 112 284 119 305 3.05e-34 126
MS.gene54581.t1 AT2G22750 40.625 192 90 4 112 284 147 333 3.68e-34 127
MS.gene54581.t1 AT2G22750 40.625 192 90 4 112 284 143 329 3.94e-34 126
MS.gene54581.t1 AT2G22750 40.625 192 89 5 112 284 119 304 4.96e-33 123
MS.gene54581.t1 AT2G22750 40.625 192 89 5 112 284 147 332 5.67e-33 124
MS.gene54581.t1 AT2G22770 37.766 188 92 2 118 280 131 318 6.45e-31 118
MS.gene54581.t1 AT2G22760 38.323 167 90 3 108 261 108 274 7.89e-30 114
MS.gene54581.t1 AT5G46760 32.161 199 96 8 104 265 396 592 9.32e-19 86.7
MS.gene54581.t1 AT4G17880 31.754 211 117 6 60 243 347 557 4.21e-17 81.6
MS.gene54581.t1 AT1G32640 32.075 159 81 3 111 245 434 589 1.23e-15 77.4
MS.gene54581.t1 AT2G46510 37.931 116 54 3 111 216 377 484 7.01e-15 75.1
MS.gene54581.t1 AT1G01260 29.114 158 87 3 109 258 420 560 1.12e-13 71.2
MS.gene54581.t1 AT1G01260 29.114 158 87 3 109 258 420 560 1.12e-13 71.2
MS.gene54581.t1 AT1G01260 29.114 158 87 3 109 258 420 560 1.12e-13 71.2
MS.gene54581.t1 AT4G16430 46.575 73 35 1 104 172 301 373 6.85e-13 68.9
MS.gene54581.t1 AT4G09820 24.906 265 171 7 27 284 273 516 1.06e-12 68.6
MS.gene54581.t1 AT5G46830 54.839 62 24 1 115 172 335 396 3.09e-12 67.0
MS.gene54581.t1 AT5G41315 29.348 184 90 7 110 257 437 616 1.09e-11 65.5
MS.gene54581.t1 AT5G41315 29.348 184 90 7 110 257 440 619 1.15e-11 65.5
MS.gene54581.t1 AT5G41315 29.348 184 90 7 110 257 432 611 1.18e-11 65.5
MS.gene54581.t1 AT3G26744 29.697 165 96 2 120 264 308 472 2.64e-11 64.3
MS.gene54581.t1 AT3G26744 29.697 165 96 2 120 264 308 472 2.64e-11 64.3
MS.gene54581.t1 AT3G26744 29.697 165 96 2 120 264 308 472 2.64e-11 64.3

Find 42 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGTTCCTAACCTTAAAA+AGG 0.267726 4.3:+37508850 MS.gene54581:CDS
TCAAGAACAAAACAAACAAT+TGG 0.334442 4.3:+37508526 MS.gene54581:CDS
CAAGTGGAAGCAAGAGTGTT+AGG 0.334987 4.3:+37509695 MS.gene54581:CDS
GGGGCTTCTAGTTAAAATTA+TGG 0.343764 4.3:+37509757 MS.gene54581:CDS
CTGCAAGAGCAATGAAGCTT+TGG 0.357341 4.3:-37508826 None:intergenic
ATCAGTGTCTCCAACCGAAT+TGG 0.364748 4.3:+37508661 MS.gene54581:CDS
CAAGAACAAAACAAACAATT+GGG 0.390107 4.3:+37508527 MS.gene54581:CDS
CATCTGCATCAAGAAAATTA+AGG 0.394973 4.3:-37508466 None:intergenic
ATCGCTGCATATGCATGGTT+TGG 0.407010 4.3:-37509618 None:intergenic
ACTCTTGCTTCCACTTGAAA+TGG 0.409697 4.3:-37509689 None:intergenic
AGAAACCTCAAAAGGGTCAT+TGG 0.411401 4.3:+37508703 MS.gene54581:CDS
AATAACAGTGTCTTACCCTT+TGG 0.416567 4.3:+37509812 MS.gene54581:CDS
GCCCCTTGTGCTCCTTGCAT+TGG 0.417499 4.3:-37509739 None:intergenic
CACTCAACAGAAACCTCAAA+AGG 0.444007 4.3:+37508695 MS.gene54581:CDS
TAGGAAAACAAGTGTTGATT+CGG 0.449123 4.3:+37509714 MS.gene54581:CDS
TGCAAGAGCAATGAAGCTTT+GGG 0.460124 4.3:-37508825 None:intergenic
GATAACATTGAATGTGTTGT+TGG 0.466089 4.3:+37509662 MS.gene54581:CDS
TGACTTGCTGAGATCATTTG+TGG 0.473303 4.3:-37508558 None:intergenic
GCTGAGATCATTTGTGGAAG+TGG 0.497595 4.3:-37508552 None:intergenic
AGCAAAAGGCCTCGTGCTCA+TGG 0.502148 4.3:+37508758 MS.gene54581:CDS
GGTAGCTACCTGAGCAATGA+TGG 0.511294 4.3:-37509855 None:intergenic
AAGGCCTCGTGCTCATGGTA+AGG 0.535577 4.3:+37508763 MS.gene54581:CDS
TTCTTGATGCAGATGTGGGA+GGG 0.544131 4.3:+37508474 MS.gene54581:CDS
CGACATTACCATCATTGCTC+AGG 0.544333 4.3:+37509847 MS.gene54581:CDS
GTTGATTCGGTTCCAATGCA+AGG 0.545125 4.3:+37509727 MS.gene54581:CDS
GTTCCAATGCAAGGAGCACA+AGG 0.563766 4.3:+37509736 MS.gene54581:CDS
TCTTCATCGCTGCATATGCA+TGG 0.570607 4.3:-37509623 None:intergenic
TTTCTTGATGCAGATGTGGG+AGG 0.583981 4.3:+37508473 MS.gene54581:CDS
ACTCAACAGAAACCTCAAAA+GGG 0.587077 4.3:+37508696 MS.gene54581:CDS
GTCGAGTGTAGAATCTCCAA+AGG 0.590011 4.3:-37509828 None:intergenic
TCCAATGCAAGGAGCACAAG+GGG 0.595381 4.3:+37509738 MS.gene54581:CDS
AGGGTACAACTTGAGCATAA+AGG 0.600355 4.3:+37510054 MS.gene54581:CDS
TGTTGGTTCACCATTTCAAG+TGG 0.611743 4.3:+37509679 MS.gene54581:CDS
TCATGGTAAGGATCACATCA+TGG 0.611981 4.3:+37508775 MS.gene54581:CDS
TCGAGTGTAGAATCTCCAAA+GGG 0.615421 4.3:-37509827 None:intergenic
CTGCATATGCATGGTTTGGT+CGG 0.617639 4.3:-37509614 None:intergenic
CGAATACAATATATTTGCTG+AGG 0.624364 4.3:+37508436 MS.gene54581:CDS
TGAAGATTCGTCATCATGTG+AGG 0.642706 4.3:+37509640 MS.gene54581:CDS
TTCCAATGCAAGGAGCACAA+GGG 0.644827 4.3:+37509737 MS.gene54581:CDS
AAGAACAAAACAAACAATTG+GGG 0.650416 4.3:+37508528 MS.gene54581:CDS
ACTTGTGAAGAACGTACGCA+TGG 0.661373 4.3:+37510078 MS.gene54581:CDS
TGATCCTTACCATGAGCACG+AGG 0.705697 4.3:-37508767 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCATATATTATTTTATAGT+TGG + chr4.3:37510027-37510046 MS.gene54581:intron 10.0%
!!! GTTTATATTTTGAAATATTT+AGG + chr4.3:37509037-37509056 MS.gene54581:intron 10.0%
!!! TCATATATTATTTTATAGTT+GGG + chr4.3:37510028-37510047 MS.gene54581:intron 10.0%
!!! TTTATTATTTTTCTTTTAGA+TGG + chr4.3:37509511-37509530 MS.gene54581:intron 10.0%
!! ATGATTAATATTAGATACAA+GGG - chr4.3:37510012-37510031 None:intergenic 15.0%
!! CATTAAAAAAAAATTGTGAT+AGG - chr4.3:37509879-37509898 None:intergenic 15.0%
!! TATGATTAATATTAGATACA+AGG - chr4.3:37510013-37510032 None:intergenic 15.0%
!!! AGACAAATCAATTTTATTTA+AGG + chr4.3:37509453-37509472 MS.gene54581:intron 15.0%
!! ATACATGACATATATGAAAT+TGG - chr4.3:37508965-37508984 None:intergenic 20.0%
!! ATACTTTGATCATATGTAAA+GGG - chr4.3:37509096-37509115 None:intergenic 20.0%
!! TGTATATTGTTTGTGTATAT+AGG - chr4.3:37509315-37509334 None:intergenic 20.0%
!!! TCATTCTCTTTTGAAATATT+TGG - chr4.3:37508635-37508654 None:intergenic 20.0%
!!! TTACATAACATACCTTTTTA+AGG - chr4.3:37508865-37508884 None:intergenic 20.0%
! AAGAACAAAACAAACAATTG+GGG + chr4.3:37508528-37508547 MS.gene54581:CDS 25.0%
! CAAGAACAAAACAAACAATT+GGG + chr4.3:37508527-37508546 MS.gene54581:CDS 25.0%
! CACAAAAGTTGTCAAAAAAA+TGG - chr4.3:37509150-37509169 None:intergenic 25.0%
! CATACTTTGATCATATGTAA+AGG - chr4.3:37509097-37509116 None:intergenic 25.0%
! CTTTGACATATAATTATGAG+CGG + chr4.3:37509343-37509362 MS.gene54581:intron 25.0%
! TAAAATTTGCACAAAAACCA+AGG - chr4.3:37509223-37509242 None:intergenic 25.0%
! TCAAGAACAAAACAAACAAT+TGG + chr4.3:37508526-37508545 MS.gene54581:CDS 25.0%
!! ATTCTAAGAGTTAGCTAATA+GGG - chr4.3:37508898-37508917 None:intergenic 25.0%
!!! ATTATTTTATAGTTGGGTGA+AGG + chr4.3:37510034-37510053 MS.gene54581:intron 25.0%
!!! GTGTTATTTGAACAACTATT+TGG - chr4.3:37509291-37509310 None:intergenic 25.0%
!!! TAACATACCTTTTTAAGGTT+AGG - chr4.3:37508860-37508879 None:intergenic 25.0%
!!! TTATTTTATAGTTGGGTGAA+GGG + chr4.3:37510035-37510054 MS.gene54581:intron 25.0%
ACTTTATCTCTTTATTGCCT+TGG + chr4.3:37509203-37509222 MS.gene54581:intron 30.0%
AGATACAAGGGTAAATTTCA+TGG - chr4.3:37510000-37510019 None:intergenic 30.0%
CAAAAACCTCAAAAAGCAAA+AGG + chr4.3:37508744-37508763 MS.gene54581:CDS 30.0%
CATCTGCATCAAGAAAATTA+AGG - chr4.3:37508469-37508488 None:intergenic 30.0%
GATAACATTGAATGTGTTGT+TGG + chr4.3:37509662-37509681 MS.gene54581:CDS 30.0%
TCTTGTTCCTAACCTTAAAA+AGG + chr4.3:37508850-37508869 MS.gene54581:CDS 30.0%
! AATTTTCTTGATGCAGATGT+GGG + chr4.3:37508470-37508489 MS.gene54581:CDS 30.0%
! CGAATACAATATATTTGCTG+AGG + chr4.3:37508436-37508455 MS.gene54581:CDS 30.0%
! GATTCTAAGAGTTAGCTAAT+AGG - chr4.3:37508899-37508918 None:intergenic 30.0%
! GTGATTCATGTTTTCCAATT+CGG - chr4.3:37508678-37508697 None:intergenic 30.0%
! TAATTTTCTTGATGCAGATG+TGG + chr4.3:37508469-37508488 MS.gene54581:CDS 30.0%
!! TAGGAAAACAAGTGTTGATT+CGG + chr4.3:37509714-37509733 MS.gene54581:CDS 30.0%
!!! TTTTTTCCACAACTTCCAAT+CGG - chr4.3:37509589-37509608 None:intergenic 30.0%
AATAACAGTGTCTTACCCTT+TGG + chr4.3:37509812-37509831 MS.gene54581:CDS 35.0%
ACTCAACAGAAACCTCAAAA+GGG + chr4.3:37508696-37508715 MS.gene54581:CDS 35.0%
GAAAGAGCTTAAAAACCGAT+TGG + chr4.3:37509571-37509590 MS.gene54581:CDS 35.0%
TAAAAACCGATTGGAAGTTG+TGG + chr4.3:37509580-37509599 MS.gene54581:CDS 35.0%
! ATTTTCCAATGACCCTTTTG+AGG - chr4.3:37508711-37508730 None:intergenic 35.0%
! GGGGCTTCTAGTTAAAATTA+TGG + chr4.3:37509757-37509776 MS.gene54581:CDS 35.0%
! TTCATGTTTTCCAATTCGGT+TGG - chr4.3:37508674-37508693 None:intergenic 35.0%
ACTCTTGCTTCCACTTGAAA+TGG - chr4.3:37509692-37509711 None:intergenic 40.0%
AGAAACCTCAAAAGGGTCAT+TGG + chr4.3:37508703-37508722 MS.gene54581:CDS 40.0%
AGGGTACAACTTGAGCATAA+AGG + chr4.3:37510054-37510073 MS.gene54581:CDS 40.0%
CACTCAACAGAAACCTCAAA+AGG + chr4.3:37508695-37508714 MS.gene54581:CDS 40.0%
TCATGGTAAGGATCACATCA+TGG + chr4.3:37508775-37508794 MS.gene54581:CDS 40.0%
TCGAGTGTAGAATCTCCAAA+GGG - chr4.3:37509830-37509849 None:intergenic 40.0%
TGAAGATTCGTCATCATGTG+AGG + chr4.3:37509640-37509659 MS.gene54581:CDS 40.0%
TGCAAGAGCAATGAAGCTTT+GGG - chr4.3:37508828-37508847 None:intergenic 40.0%
!! TGACTTGCTGAGATCATTTG+TGG - chr4.3:37508561-37508580 None:intergenic 40.0%
!! TGTTGGTTCACCATTTCAAG+TGG + chr4.3:37509679-37509698 MS.gene54581:CDS 40.0%
ACTTGTGAAGAACGTACGCA+TGG + chr4.3:37510078-37510097 MS.gene54581:CDS 45.0%
ATCAGTGTCTCCAACCGAAT+TGG + chr4.3:37508661-37508680 MS.gene54581:CDS 45.0%
ATCGCTGCATATGCATGGTT+TGG - chr4.3:37509621-37509640 None:intergenic 45.0%
CGACATTACCATCATTGCTC+AGG + chr4.3:37509847-37509866 MS.gene54581:CDS 45.0%
CTGCAAGAGCAATGAAGCTT+TGG - chr4.3:37508829-37508848 None:intergenic 45.0%
GCTGAGATCATTTGTGGAAG+TGG - chr4.3:37508555-37508574 None:intergenic 45.0%
GTCGAGTGTAGAATCTCCAA+AGG - chr4.3:37509831-37509850 None:intergenic 45.0%
TCTTCATCGCTGCATATGCA+TGG - chr4.3:37509626-37509645 None:intergenic 45.0%
TTCTTGATGCAGATGTGGGA+GGG + chr4.3:37508474-37508493 MS.gene54581:CDS 45.0%
TTTCTTGATGCAGATGTGGG+AGG + chr4.3:37508473-37508492 MS.gene54581:CDS 45.0%
! TTCCAATGCAAGGAGCACAA+GGG + chr4.3:37509737-37509756 MS.gene54581:CDS 45.0%
!! CAAGTGGAAGCAAGAGTGTT+AGG + chr4.3:37509695-37509714 MS.gene54581:CDS 45.0%
!! CTGCATATGCATGGTTTGGT+CGG - chr4.3:37509617-37509636 None:intergenic 45.0%
!! GTTGATTCGGTTCCAATGCA+AGG + chr4.3:37509727-37509746 MS.gene54581:CDS 45.0%
!!! ACGAGGCCTTTTGCTTTTTG+AGG - chr4.3:37508753-37508772 None:intergenic 45.0%
!!! TATTTTTTTTTTGTAAATTT+TGG + chr4.3:37509246-37509265 MS.gene54581:intron 5.0%
!!! TTTATATTTTGAAATATTTA+GGG + chr4.3:37509038-37509057 MS.gene54581:intron 5.0%
!!! TTTGTTTTTTTTATTTATTT+TGG + chr4.3:37509964-37509983 MS.gene54581:intron 5.0%
GGTAGCTACCTGAGCAATGA+TGG - chr4.3:37509858-37509877 None:intergenic 50.0%
TGATCCTTACCATGAGCACG+AGG - chr4.3:37508770-37508789 None:intergenic 50.0%
! GTTCCAATGCAAGGAGCACA+AGG + chr4.3:37509736-37509755 MS.gene54581:CDS 50.0%
! TCCAATGCAAGGAGCACAAG+GGG + chr4.3:37509738-37509757 MS.gene54581:CDS 50.0%
AAGGCCTCGTGCTCATGGTA+AGG + chr4.3:37508763-37508782 MS.gene54581:CDS 55.0%
AGCAAAAGGCCTCGTGCTCA+TGG + chr4.3:37508758-37508777 MS.gene54581:CDS 55.0%
GCCCCTTGTGCTCCTTGCAT+TGG - chr4.3:37509742-37509761 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 37508431 37510126 37508431 ID=MS.gene54581
chr4.3 mRNA 37508431 37510126 37508431 ID=MS.gene54581.t1;Parent=MS.gene54581
chr4.3 exon 37508431 37508871 37508431 ID=MS.gene54581.t1.exon1;Parent=MS.gene54581.t1
chr4.3 CDS 37508431 37508871 37508431 ID=cds.MS.gene54581.t1;Parent=MS.gene54581.t1
chr4.3 exon 37509530 37509868 37509530 ID=MS.gene54581.t1.exon2;Parent=MS.gene54581.t1
chr4.3 CDS 37509530 37509868 37509530 ID=cds.MS.gene54581.t1;Parent=MS.gene54581.t1
chr4.3 exon 37510046 37510126 37510046 ID=MS.gene54581.t1.exon3;Parent=MS.gene54581.t1
chr4.3 CDS 37510046 37510126 37510046 ID=cds.MS.gene54581.t1;Parent=MS.gene54581.t1
Gene Sequence

>MS.gene54581

ATGGACGAATACAATATATTTGCTGAGGAATGCAACCTTAATTTTCTTGATGCAGATGTGGGAGGGTTTCTTTCAGATGACATAGCTAATGTATTTCAAGAACAAAACAAACAATTGGGGTCCACTTCCACAAATGATCTCAGCAAGTCATTCATTCATGAAACAATTGATAATAGTGACAAAATCAATGAATCTCTTTCACCAAATATTTCAAAAGAGAATGAAACAATATCAGTGTCTCCAACCGAATTGGAAAACATGAATCACTCAACAGAAACCTCAAAAGGGTCATTGGAAAATGAAAAGTTTGAAGCAAAAACCTCAAAAAGCAAAAGGCCTCGTGCTCATGGTAAGGATCACATCATGGCTGAGAGAAATCGAAGAGAGAAACTCACCCAAAGCTTCATTGCTCTTGCAGCTCTTGTTCCTAACCTTAAAAAGGTATGTTATGTAATTTTCACTTACCCTATTAGCTAACTCTTAGAATCATCAACTATCAATCAATTACTTCATCGATAAATACATGTTGCACCAATTTCATATATGTCATGTATAAGATTTTGATCACTAATATCTTTAAATATTTATCATAAAAAGTTATGAAAAGTTTATATTTTGAAATATTTAGGGAGACAAATCGAACATCATATATATTAACATTTCCCTTTACATATGATCAAAGTATGTTATATGAATGAGAAATGATATTTGAACATCCATTTTTTTGACAACTTTTGTGATAATTTTCTTTTTCATACTCACATTATTTTTTACTTTATCTCTTTATTGCCTTGGTTTTTGTGCAAATTTTATTTTATTTTTTTTTTGTAAATTTTGGTTGTTATATAAGTTGTCAACCAAATAGTTGTTCAAATAACACTCCTATATACACAAACAATATACATAGTAAAACTTTGACATATAATTATGAGCGGAGAGTACAAATATAAGAAAATTAATTACATATTTAATACATTCTTTGTCAAAAAATATTTAATACATTCTTATCTTTCTTTAAAATAAGACAAATCAATTTTATTTAAGGACAAATCTATCATTTAACATTATTATTTCTAACTCTTTATTATTTTTCTTTTAGATGGACAAGTTATCTGTACTAATTGACACTATCAAATACTTGAAAGAGCTTAAAAACCGATTGGAAGTTGTGGAAAAAAAGTCACCGACCAAACCATGCATATGCAGCGATGAAGATTCGTCATCATGTGAGGATAACATTGAATGTGTTGTTGGTTCACCATTTCAAGTGGAAGCAAGAGTGTTAGGAAAACAAGTGTTGATTCGGTTCCAATGCAAGGAGCACAAGGGGCTTCTAGTTAAAATTATGGTCGAAATTCAAAAATTTCAACTATTTGTTGTCAATAACAGTGTCTTACCCTTTGGAGATTCTACACTCGACATTACCATCATTGCTCAGGTAGCTACCTATCACAATTTTTTTTTAATGTTATTATCTTATAATAAGTAGTTTATTCTAAGTTGTTTTCTACAATAATTGCGTGATATATTTATTTTGTTTTTTTTATTTATTTTGGTTTTTTTTCTCCATGAAATTTACCCTTGTATCTAATATTAATCATATATTATTTTATAGTTGGGTGAAGGGTACAACTTGAGCATAAAGGAACTTGTGAAGAACGTACGCATGGCATTATTGAAGTTTACGTCATCATAA
Protein sequence

>MS.gene54581.t1

MDEYNIFAEECNLNFLDADVGGFLSDDIANVFQEQNKQLGSTSTNDLSKSFIHETIDNSDKINESLSPNISKENETISVSPTELENMNHSTETSKGSLENEKFEAKTSKSKRPRAHGKDHIMAERNRREKLTQSFIALAALVPNLKKMDKLSVLIDTIKYLKELKNRLEVVEKKSPTKPCICSDEDSSSCEDNIECVVGSPFQVEARVLGKQVLIRFQCKEHKGLLVKIMVEIQKFQLFVVNNSVLPFGDSTLDITIIAQLGEGYNLSIKELVKNVRMALLKFTSS