AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54740.t1 MTR_6g008970 97.549 1387 23 4 1 1376 1 1387 0.0 2782
MS.gene54740.t1 MTR_5g036670 51.816 1459 565 37 1 1373 1 1407 0.0 1283
MS.gene54740.t1 MTR_8g062700 50.204 1468 572 34 1 1373 1 1404 0.0 1274
MS.gene54740.t1 MTR_8g062700 50.204 1468 571 35 1 1373 1 1403 0.0 1271
MS.gene54740.t1 MTR_6g008995 68.276 435 84 7 49 476 27 414 0.0 562
MS.gene54740.t1 MTR_6g008995 67.574 404 77 7 80 476 1 357 2.17e-171 517
MS.gene54740.t1 MTR_8g069945 47.934 363 159 11 843 1189 66 414 2.56e-81 274
MS.gene54740.t1 MTR_7g013410 46.939 147 69 2 63 207 2 141 4.91e-39 142
MS.gene54740.t1 MTR_8g062350 41.000 200 76 4 50 207 2 201 2.52e-35 134
MS.gene54740.t1 MTR_1g105955 44.079 152 78 2 56 207 13 157 1.08e-28 114
MS.gene54740.t1 MTR_1g105955 53.623 69 32 0 59 127 95 163 1.78e-15 76.6
MS.gene54740.t1 MTR_1g105960 64.000 75 27 0 60 134 2 76 1.91e-25 102
MS.gene54740.t1 MTR_3g006150 40.506 158 85 4 53 207 2 153 1.49e-22 96.3
MS.gene54740.t1 MTR_3g006150 58.974 78 31 1 52 128 83 160 1.71e-19 87.4
MS.gene54740.t1 MTR_4g133300 40.000 160 86 3 49 208 3 152 3.76e-22 97.8
MS.gene54740.t1 MTR_4g133300 34.810 158 100 1 51 208 81 235 9.45e-19 87.8
MS.gene54740.t1 MTR_4g133300 53.247 77 34 1 52 128 167 241 1.69e-15 78.6
MS.gene54740.t1 MTR_1g104960 34.211 152 100 0 57 208 11 162 1.81e-21 93.6
MS.gene54740.t1 MTR_1g104960 44.595 74 41 0 60 133 100 173 1.50e-13 70.9
MS.gene54740.t1 MTR_3g006125 40.373 161 90 3 53 207 83 243 2.21e-21 95.9
MS.gene54740.t1 MTR_3g006125 58.108 74 30 1 55 127 176 249 1.85e-19 90.1
MS.gene54740.t1 MTR_3g006105 38.750 160 92 3 53 206 2 161 3.26e-21 93.2
MS.gene54740.t1 MTR_3g006105 52.703 74 34 1 55 127 95 168 7.79e-15 74.7
MS.gene54740.t1 MTR_4g133470 39.073 151 83 2 58 208 11 152 8.57e-21 94.0
MS.gene54740.t1 MTR_4g133470 34.177 158 101 1 51 208 81 235 3.41e-17 83.2
MS.gene54740.t1 MTR_4g133470 53.247 77 34 1 52 128 167 241 1.55e-15 78.6
MS.gene54740.t1 MTR_3g006065 39.241 158 87 4 53 207 2 153 1.20e-20 91.7
MS.gene54740.t1 MTR_3g006065 58.974 78 31 1 52 128 83 160 1.13e-19 89.0
MS.gene54740.t1 MTR_1g104940 55.263 76 34 0 59 134 14 89 4.63e-20 87.8
MS.gene54740.t1 MTR_3g006185 38.125 160 94 3 53 207 2 161 1.06e-18 85.5
MS.gene54740.t1 MTR_3g006185 51.351 74 35 1 55 127 94 167 9.82e-16 77.0
MS.gene54740.t1 MTR_5g036790 51.429 70 34 0 138 207 13 82 6.91e-17 77.4
MS.gene54740.t1 MTR_1g105010 40.000 95 52 1 48 137 5 99 4.39e-16 76.3
MS.gene54740.t1 MTR_8g469180 42.553 94 54 0 332 425 192 285 5.03e-16 80.5
MS.gene54740.t1 MTR_8g469180 45.349 86 47 0 328 413 107 192 1.56e-15 79.3
MS.gene54740.t1 MTR_1g023820 37.419 155 37 6 89 241 17 113 1.71e-15 74.7
MS.gene54740.t1 MTR_5g055670 80.488 41 8 0 92 132 89 129 2.53e-15 74.7
MS.gene54740.t1 MTR_1g104937 46.154 78 42 0 57 134 10 87 3.12e-15 73.6
MS.gene54740.t1 MTR_7g013380 31.818 154 99 3 59 208 99 250 4.92e-15 77.8
MS.gene54740.t1 MTR_7g013380 30.516 213 134 8 60 262 14 222 2.58e-13 72.8
MS.gene54740.t1 MTR_7g013380 29.586 169 59 3 59 225 185 295 1.96e-11 67.0
MS.gene54740.t1 MTR_5g033370 51.807 83 38 2 1185 1266 121 202 5.74e-15 76.6
MS.gene54740.t1 MTR_2g097830 40.187 107 55 2 58 164 69 166 9.41e-15 73.9
MS.gene54740.t1 MTR_1g109550 35.833 120 67 2 56 175 13 122 9.59e-15 73.2
MS.gene54740.t1 MTR_1g093310 50.649 77 30 2 54 128 2 72 7.16e-14 68.6
MS.gene54740.t1 MTR_7g089490 45.679 81 43 1 47 127 5 84 7.80e-13 67.0
MS.gene54740.t1 MTR_1g104980 30.872 149 88 1 61 209 1 134 2.08e-12 67.4
MS.gene54740.t1 MTR_1g091047 44.776 67 36 1 58 123 8 74 2.16e-11 61.2
MS.gene54740.t1 MTR_5g036820 41.667 72 40 1 138 207 13 84 7.72e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54740.t1 AT5G15020 57.509 1405 516 26 1 1375 1 1354 0.0 1472
MS.gene54740.t1 AT5G15020 57.022 1417 516 27 1 1375 1 1366 0.0 1464
MS.gene54740.t1 AT3G01320 57.236 1382 513 33 1 1341 1 1345 0.0 1424
MS.gene54740.t1 AT3G01320 57.039 1378 510 33 1 1341 1 1333 0.0 1410
MS.gene54740.t1 AT1G70060 48.308 1389 588 34 48 1373 3 1324 0.0 1148
MS.gene54740.t1 AT1G70060 48.308 1389 588 34 48 1373 3 1324 0.0 1148
MS.gene54740.t1 AT1G24190 49.224 1353 587 36 45 1348 3 1304 0.0 1145
MS.gene54740.t1 AT1G24190 49.224 1353 587 36 45 1348 3 1304 0.0 1144
MS.gene54740.t1 AT1G24190 49.005 1357 588 37 45 1348 3 1308 0.0 1136
MS.gene54740.t1 AT1G59890 51.868 455 186 7 401 825 249 700 1.93e-133 441
MS.gene54740.t1 AT1G59890 45.860 471 202 12 934 1373 717 1165 1.03e-105 363
MS.gene54740.t1 AT1G59890 50.741 270 109 7 1 266 1 250 5.29e-60 226
MS.gene54740.t1 AT1G59890 43.643 582 242 10 326 825 118 695 4.72e-132 437
MS.gene54740.t1 AT1G59890 46.325 449 197 11 934 1360 712 1138 7.48e-104 358
MS.gene54740.t1 AT1G59890 50.741 270 109 7 1 266 1 250 4.51e-60 226
MS.gene54740.t1 AT1G59890 43.643 582 242 10 326 825 118 695 7.69e-132 436
MS.gene54740.t1 AT1G59890 45.860 471 202 12 934 1373 712 1160 8.59e-106 363
MS.gene54740.t1 AT1G59890 50.741 270 109 7 1 266 1 250 5.23e-60 226
MS.gene54740.t1 AT1G59890 43.299 582 240 11 326 825 118 691 2.93e-128 426
MS.gene54740.t1 AT1G59890 45.860 471 202 12 934 1373 708 1156 7.46e-106 364
MS.gene54740.t1 AT1G59890 50.741 270 109 7 1 266 1 250 4.59e-60 226
MS.gene54740.t1 AT1G10450 48.879 446 201 9 430 851 264 706 2.07e-120 404
MS.gene54740.t1 AT1G10450 44.266 436 222 8 934 1364 689 1108 6.08e-97 338
MS.gene54740.t1 AT1G10450 44.898 294 123 7 1 293 1 256 1.76e-57 218
MS.gene54740.t1 AT1G10450 48.879 446 201 9 430 851 264 706 2.07e-120 404
MS.gene54740.t1 AT1G10450 44.266 436 222 8 934 1364 689 1108 6.08e-97 338
MS.gene54740.t1 AT1G10450 44.898 294 123 7 1 293 1 256 1.76e-57 218
MS.gene54740.t1 AT1G10450 48.879 446 201 9 430 851 315 757 9.22e-120 403
MS.gene54740.t1 AT1G10450 44.266 436 222 8 934 1364 740 1159 1.20e-96 338
MS.gene54740.t1 AT1G10450 44.898 294 123 7 1 293 52 307 2.45e-57 218
MS.gene54740.t1 AT1G24200 54.301 186 76 3 45 230 3 179 1.17e-53 186
MS.gene54740.t1 AT1G70030 53.846 156 70 2 52 207 4 157 8.02e-47 165
MS.gene54740.t1 AT5G15025 55.970 134 46 2 1 133 1 122 2.11e-38 140
MS.gene54740.t1 AT1G70030 44.231 156 53 2 52 207 15 136 2.05e-30 117
MS.gene54740.t1 AT1G70030 53.704 108 49 1 52 159 15 121 2.29e-28 111
MS.gene54740.t1 AT5G35610 42.953 149 70 3 51 188 2 146 2.32e-28 112
MS.gene54740.t1 AT1G24230 39.735 151 86 3 54 203 81 227 6.24e-27 111
MS.gene54740.t1 AT1G24230 31.361 169 98 4 48 213 3 156 1.08e-16 81.6
MS.gene54740.t1 AT1G10250 70.000 70 20 1 1141 1209 1 70 1.50e-23 95.9
MS.gene54740.t1 AT1G24250 37.342 158 75 2 56 212 117 251 3.73e-23 100
MS.gene54740.t1 AT1G24250 24.171 211 139 4 47 236 2 212 3.66e-11 65.5
MS.gene54740.t1 AT1G27280 35.616 146 93 1 47 191 69 214 5.24e-22 96.7
MS.gene54740.t1 AT1G23810 35.032 157 78 2 56 211 106 239 5.42e-22 97.1
MS.gene54740.t1 AT4G12020 55.914 93 35 2 41 133 295 381 8.07e-22 103
MS.gene54740.t1 AT4G12020 55.914 93 35 2 41 133 295 381 8.72e-22 103
MS.gene54740.t1 AT4G12020 55.914 93 35 2 41 133 295 381 8.72e-22 103
MS.gene54740.t1 AT4G12020 55.914 93 35 2 41 133 295 381 9.28e-22 103
MS.gene54740.t1 AT4G12020 55.914 93 35 2 41 133 295 381 9.28e-22 103
MS.gene54740.t1 AT4G12020 55.914 93 35 2 41 133 295 381 9.45e-22 103
MS.gene54740.t1 AT4G12020 55.914 93 35 2 41 133 295 381 9.71e-22 103
MS.gene54740.t1 AT4G12020 55.914 93 35 2 41 133 295 381 9.72e-22 103
MS.gene54740.t1 AT4G12020 55.914 93 35 2 41 133 295 381 9.97e-22 103
MS.gene54740.t1 AT4G12020 55.914 93 35 2 41 133 295 381 9.98e-22 103
MS.gene54740.t1 AT4G12020 55.914 93 35 2 41 133 228 314 1.03e-21 103
MS.gene54740.t1 AT5G15040 57.143 70 30 0 62 131 6 75 5.22e-20 86.3
MS.gene54740.t1 AT5G15040 57.143 70 30 0 62 131 6 75 5.22e-20 86.3
MS.gene54740.t1 AT5G15040 57.143 70 30 0 62 131 6 75 5.22e-20 86.3
MS.gene54740.t1 AT1G24210 32.544 169 92 3 48 215 3 150 1.23e-19 87.8
MS.gene54740.t1 AT1G27260 32.500 160 84 2 48 206 82 218 9.63e-18 84.3
MS.gene54740.t1 AT1G27260 30.128 156 101 2 57 206 1 154 9.10e-17 81.3
MS.gene54740.t1 AT1G27240 33.721 172 93 4 56 206 11 182 1.23e-17 82.8
MS.gene54740.t1 AT1G27220 48.750 80 41 0 47 126 2 81 1.01e-16 80.1
MS.gene54740.t1 AT1G27250 45.349 86 43 1 45 126 3 88 1.22e-15 75.5
MS.gene54740.t1 AT1G27270 33.766 154 78 3 56 208 110 240 8.26e-12 67.4

Find 287 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCATTGGTTGTCAATTTC+TGG 0.090804 6.2:+4507148 None:intergenic
AAAGAATGATTTACAAAATT+TGG 0.100558 6.2:-4505152 MS.gene54740:intron
TGTAAACATGTTCATCATTT+TGG 0.116960 6.2:+4506634 None:intergenic
AATCTCCATGCGACTTAAAA+AGG 0.189205 6.2:+4506426 None:intergenic
CTCAGAAACAAACCGAAATA+TGG 0.194221 6.2:-4500113 MS.gene54740:intron
ACTTCATTCTTGTCAGATTT+TGG 0.196682 6.2:+4502533 None:intergenic
TAGTAGAGATGATCATTTAA+TGG 0.245705 6.2:-4502420 MS.gene54740:CDS
GTTCAGATTTCAATAAAGTT+TGG 0.277896 6.2:-4503139 MS.gene54740:CDS
GAAGATGTCAAAGTAGTTAA+TGG 0.280275 6.2:-4500053 MS.gene54740:CDS
GGAGTTAACGGAGGAGGAGG+TGG 0.295858 6.2:-4507186 MS.gene54740:CDS
ATCTTCAAACTTGGCATTCT+CGG 0.300196 6.2:+4500879 None:intergenic
TTAGAGCGATGTGAAAATAT+TGG 0.306978 6.2:-4504369 MS.gene54740:intron
GCTGCCAATGATAAAGAAAA+TGG 0.311099 6.2:-4502464 MS.gene54740:CDS
GATCATTTAATGGAAAATAA+AGG 0.315724 6.2:-4502410 MS.gene54740:CDS
GTCTGTCCTCCCTGGCAAAA+AGG 0.316087 6.2:-4500315 MS.gene54740:CDS
TTTATGCAGTTCTAAATCTA+AGG 0.318526 6.2:-4503289 MS.gene54740:intron
GAGGCTCTGGAGTACCTTCT+TGG 0.321223 6.2:-4502696 MS.gene54740:CDS
GGAAGTGAAAGACATGTTTC+AGG 0.324751 6.2:-4507109 MS.gene54740:CDS
TGCAGTCGTCTAGTCCTTCT+CGG 0.325669 6.2:-4500436 MS.gene54740:intron
GTCTTTCACTTCCTTCAAAT+AGG 0.332619 6.2:+4507119 None:intergenic
TCTGCTGCTGTCACAATTAG+AGG 0.333540 6.2:-4502308 MS.gene54740:CDS
TTCAATCGAGTCAATATTAC+AGG 0.334568 6.2:+4503191 None:intergenic
GGAGGTGGTGGCGGCGGAGG+TGG 0.337202 6.2:-4507207 MS.gene54740:CDS
CCCGGAGGTGGTGGCGGCGG+AGG 0.337404 6.2:-4507210 MS.gene54740:CDS
GATGAATGTCGAGCAATTCT+TGG 0.338703 6.2:-4500859 MS.gene54740:CDS
ACCTCCGCCGCCACCACCTC+CGG 0.340971 6.2:+4507209 None:intergenic
TCATCTAAGTCCCCATATTT+CGG 0.343556 6.2:+4500101 None:intergenic
TTCAGATTTCAATAAAGTTT+GGG 0.344404 6.2:-4503138 MS.gene54740:CDS
TCCTCCTCAGAGTCGGCATT+CGG 0.347982 6.2:+4501710 None:intergenic
CTTGAATTGGACTCTCTGTT+GGG 0.353244 6.2:+4502560 None:intergenic
CTTCCTCCTCATGATCTTCC+CGG 0.362474 6.2:+4501483 None:intergenic
CCTCCTCAGAGTCGGCATTC+GGG 0.362704 6.2:+4501711 None:intergenic
ATGATTTCTTTGTTCTCTTT+AGG 0.364298 6.2:-4501253 MS.gene54740:CDS
AGGAAATACGAGTCTAGAAA+TGG 0.366851 6.2:-4501632 MS.gene54740:CDS
CAAATAGGATAAAGCATCAT+TGG 0.368007 6.2:+4507134 None:intergenic
AGATCATGAGGAGGAAGATA+TGG 0.369226 6.2:-4501477 MS.gene54740:CDS
CGCTGACTAGCAGTAGGAAT+TGG 0.371739 6.2:+4503797 None:intergenic
TTTGCAGACGGGTTCCTTGC+TGG 0.381199 6.2:-4504262 MS.gene54740:intron
ACACCATTGGCCACTGGTAC+TGG 0.384065 6.2:+4501815 None:intergenic
TTCAATGCAGCGGAGTTCTA+TGG 0.387006 6.2:-4506327 MS.gene54740:CDS
TAAGACACTTCAAGAATGTT+TGG 0.387594 6.2:+4505200 None:intergenic
CCTTGAATTGGACTCTCTGT+TGG 0.392637 6.2:+4502559 None:intergenic
AGGTGCATTGAACGCCTATA+TGG 0.395051 6.2:-4503269 MS.gene54740:CDS
CAAATCACAATGACGATAGA+AGG 0.396177 6.2:-4501652 MS.gene54740:CDS
AGTTAACGGAGGAGGAGGTG+GGG 0.396605 6.2:-4507184 MS.gene54740:CDS
ATCATTGGTTGTCAATTTCT+GGG 0.397391 6.2:+4507149 None:intergenic
AACAGAGGAAGCGTGAGAGC+AGG 0.401466 6.2:-4506091 MS.gene54740:CDS
CACTGGGTATCTGTGACTTC+CGG 0.410808 6.2:-4503743 MS.gene54740:CDS
CAAGGCCCCGGAGGTGGTGG+CGG 0.412053 6.2:-4507216 MS.gene54740:CDS
GGTCAAGGCCCCGGAGGTGG+TGG 0.414214 6.2:-4507219 MS.gene54740:CDS
TCAGAAACAAACCGAAATAT+GGG 0.416743 6.2:-4500112 MS.gene54740:intron
AGAAACAAGAGGAGTGGAAT+AGG 0.416915 6.2:-4503166 MS.gene54740:CDS
GGCCCCGGAGGTGGTGGCGG+CGG 0.422534 6.2:-4507213 MS.gene54740:CDS
TCAATAAAATTATGAGGCTC+TGG 0.422837 6.2:-4502709 MS.gene54740:CDS
GACGAGCACCGTCCAGAGGC+TGG 0.424663 6.2:-4501605 MS.gene54740:CDS
CATCAAGTACATCATCTTCT+CGG 0.425732 6.2:-4499237 MS.gene54740:CDS
CCTCCGCCGCCACCACCTCC+GGG 0.426551 6.2:+4507210 None:intergenic
TCCGAGTGCTAATGTACCTT+TGG 0.428070 6.2:-4502059 MS.gene54740:CDS
CAACAAGCGCTGAAGTGAAA+TGG 0.428634 6.2:-4501098 MS.gene54740:CDS
AGAATTATCTGGTAAGAATC+TGG 0.428698 6.2:+4506388 None:intergenic
TCCACACAGCATGCTCCATT+TGG 0.429499 6.2:-4506356 MS.gene54740:CDS
TATTGAATAACTCTTTACTT+TGG 0.429894 6.2:+4502726 None:intergenic
TTCTGCAATTTGTGCTGTAA+TGG 0.430468 6.2:-4500075 MS.gene54740:CDS
TGATGCTTTATCCTATTTGA+AGG 0.431866 6.2:-4507130 MS.gene54740:CDS
CATTCATATTGTCCATGAGC+TGG 0.432194 6.2:+4500405 None:intergenic
ATCATTTAATGGAAAATAAA+GGG 0.432519 6.2:-4502409 MS.gene54740:CDS
GAGAACTGTTTAACAAATCC+AGG 0.434098 6.2:+4502356 None:intergenic
CTCTGCTTCACCTTCACTCT+CGG 0.434724 6.2:+4501430 None:intergenic
GGCGGCGGAGGTGGAGTTAA+CGG 0.435228 6.2:-4507198 MS.gene54740:CDS
TCGACATTCATCTTCAAACT+TGG 0.440486 6.2:+4500870 None:intergenic
TATGAAAAGTCTCGGAAACC+TGG 0.442004 6.2:-4500638 MS.gene54740:CDS
CAGTTTCTGCGATAAAGTTA+AGG 0.442484 6.2:-4505248 MS.gene54740:CDS
TATGGTCAAGGCCCCGGAGG+TGG 0.442797 6.2:-4507222 MS.gene54740:CDS
TGCATTGAATTTCGACCAAA+TGG 0.444405 6.2:+4506341 None:intergenic
GAGTTAACGGAGGAGGAGGT+GGG 0.447308 6.2:-4507185 MS.gene54740:CDS
CACGATCATGAGAAGAAAAT+CGG 0.448821 6.2:+4506174 None:intergenic
GAGTGTTGAACGTCCTGATC+TGG 0.449508 6.2:-4506147 MS.gene54740:CDS
TCTGACAAGAATGAAGTTGA+TGG 0.449745 6.2:-4502527 MS.gene54740:CDS
TCATTATCACCTCCAGCCTC+TGG 0.449905 6.2:+4501593 None:intergenic
GCTAAGGTCAAGTTCTTGAA+TGG 0.450350 6.2:+4503965 None:intergenic
GAAAGAGTAATCCTCGCTTC+CGG 0.451243 6.2:+4503724 None:intergenic
CGAGGTCATGAAAGATTTCA+AGG 0.454978 6.2:-4507058 MS.gene54740:CDS
CGCAAGTACTGAATGATCAC+TGG 0.457151 6.2:-4503760 MS.gene54740:CDS
GTTAACGGAGGAGGAGGTGG+GGG 0.458649 6.2:-4507183 MS.gene54740:CDS
CAAGACCATGGTCACCATAT+AGG 0.459075 6.2:+4503255 None:intergenic
CCTTTCCGACTCATGCGATT+GGG 0.460266 6.2:+4502652 None:intergenic
CCCTTTCCGACTCATGCGAT+TGG 0.461152 6.2:+4502651 None:intergenic
AGCGAAAATGTTTCTGAAGC+TGG 0.461684 6.2:-4501548 MS.gene54740:CDS
ACTGAATCATTTAATTTCCC+AGG 0.462924 6.2:+4500620 None:intergenic
GAAGGTGCTGAAGAATTATC+TGG 0.464158 6.2:+4506377 None:intergenic
GGAAAGATTCCGCAAATTGA+TGG 0.464870 6.2:-4499197 MS.gene54740:CDS
AGTTATTCAATAAAATTATG+AGG 0.465617 6.2:-4502715 MS.gene54740:CDS
CATCATCTTCTCGGTCTCGC+AGG 0.469915 6.2:-4499228 MS.gene54740:CDS
TGTGATGCTGATGCACAAAC+TGG 0.470759 6.2:-4501401 MS.gene54740:CDS
AACAGCAACAGCAGCAATCT+CGG 0.471061 6.2:+4500376 None:intergenic
GATGCACAAACTGGAGTAGA+TGG 0.473082 6.2:-4501392 MS.gene54740:CDS
AACATGATCTTGATAACAGC+AGG 0.473114 6.2:-4506037 MS.gene54740:CDS
AGTGTTATCTCATATCCCTT+TGG 0.473567 6.2:+4506838 None:intergenic
TTTCTGATGTAGGTTTGAGC+TGG 0.475066 6.2:-4503530 MS.gene54740:intron
CGAAGCTCCTCCGAAGAAAA+CGG 0.475667 6.2:-4506800 MS.gene54740:CDS
GGAAATACGAGTCTAGAAAT+GGG 0.477628 6.2:-4501631 MS.gene54740:CDS
CATTGGCAGCTACGCTAGTC+CGG 0.479133 6.2:+4502477 None:intergenic
ACCTTCTTGGAACCGATGCT+TGG 0.481962 6.2:-4502683 MS.gene54740:CDS
CTTGGCAGATTCTTTATGAA+AGG 0.482166 6.2:-4501143 MS.gene54740:intron
AGCGTGAGAGCAGGGATAGA+AGG 0.483093 6.2:-4506082 MS.gene54740:CDS
GACATCAGCATCAGTAGGTC+GGG 0.485289 6.2:+4502108 None:intergenic
ATGTTCTCTGTCCTCCAACT+TGG 0.490073 6.2:+4504049 None:intergenic
AACGTTGTTCTCCGAGCTAC+CGG 0.490493 6.2:-4503935 MS.gene54740:CDS
TGGTGTCATAGCAAGGGTTA+AGG 0.492194 6.2:-4506911 MS.gene54740:CDS
TGTCAAAGTAGTTAATGGAT+TGG 0.492576 6.2:-4500048 MS.gene54740:CDS
TGCTAATGTACCTTTGGTTG+AGG 0.494649 6.2:-4502053 MS.gene54740:intron
AAGAAAATGGTTCTGTTGGT+GGG 0.494771 6.2:-4502451 MS.gene54740:CDS
TTCATTTGTTGAAGATGTGA+AGG 0.494932 6.2:-4501300 MS.gene54740:CDS
TTATCTCATATCCCTTTGGC+AGG 0.495574 6.2:+4506842 None:intergenic
CTTCCATCACCTCCTACGTT+AGG 0.495943 6.2:+4502584 None:intergenic
TCGGCTCTCGATCCAGCTCA+TGG 0.496091 6.2:-4500417 MS.gene54740:CDS
AGGGCTGAGGACAGGAAAGC+AGG 0.496502 6.2:-4502632 MS.gene54740:CDS
TACTTGCATTTGCCGCATCA+CGG 0.497670 6.2:+4506301 None:intergenic
CTGCTGGTGATGAATGCTCC+CGG 0.497940 6.2:-4501502 MS.gene54740:CDS
TTTCAGGTGACCGATTTGCT+TGG 0.500661 6.2:-4504429 MS.gene54740:intron
TTGAAGATGTGAAGGATTCA+AGG 0.505444 6.2:-4501292 MS.gene54740:CDS
TCCGAGCTACCGGCTTCTAC+CGG 0.510477 6.2:-4503925 MS.gene54740:CDS
AATAACGAACAAGTTTATAC+AGG 0.511876 6.2:+4502765 None:intergenic
TACATTAGCACTCGGAGACT+TGG 0.511993 6.2:+4502066 None:intergenic
TAAAGAGAAGCAGCAGAAAG+AGG 0.512413 6.2:-4502879 MS.gene54740:CDS
CCAACAGAGAGTCCAATTCA+AGG 0.512813 6.2:-4502559 MS.gene54740:CDS
TTAGAGCCACTTGCTGCTGA+TGG 0.513114 6.2:-4504089 MS.gene54740:intron
GTTTCCAGGACTGACACTAC+TGG 0.514491 6.2:-4506931 MS.gene54740:intron
AATATATAAATTAATCAGAC+AGG 0.514617 6.2:-4500800 MS.gene54740:intron
CCATGAATTTACAGTTTAGG+TGG 0.516414 6.2:+4499168 None:intergenic
GCCGGTAGAAGCCGGTAGCT+CGG 0.517350 6.2:+4503924 None:intergenic
TTACAGGCAGAGCATGAGTT+GGG 0.517425 6.2:+4503207 None:intergenic
GCTGCTCATGATGATAAAGA+TGG 0.518148 6.2:-4505948 MS.gene54740:CDS
AATGAAGTTGATGGTAGAGT+AGG 0.518384 6.2:-4502518 MS.gene54740:CDS
TGAAGGTATGGTCAAGGCCC+CGG 0.518872 6.2:-4507228 MS.gene54740:intron
ACTTGCATTTGCCGCATCAC+GGG 0.520193 6.2:+4506302 None:intergenic
GACAGAAACCTCTCTGATAA+CGG 0.520965 6.2:+4501359 None:intergenic
TTTAACACTTTCCTGCCAAA+GGG 0.523436 6.2:-4506853 MS.gene54740:CDS
TTGAATTGGACTCTCTGTTG+GGG 0.524634 6.2:+4502561 None:intergenic
GAAAACAGTGACAAAGCCCC+TGG 0.525047 6.2:-4502374 MS.gene54740:CDS
GGTGGAGTTAACGGAGGAGG+AGG 0.526833 6.2:-4507189 MS.gene54740:CDS
GCTAGTCAGCGATCTGAGCT+TGG 0.528684 6.2:-4503785 MS.gene54740:CDS
AAGGACCTACAGATTGAAAC+CGG 0.529512 6.2:+4500552 None:intergenic
AGAATGCTTTCCAAGCAAAT+CGG 0.530128 6.2:+4504419 None:intergenic
TGTTCAGATGTGAAGATGAC+AGG 0.530892 6.2:-4503667 MS.gene54740:intron
AGCAGTGTGCATATGTCTCC+AGG 0.534155 6.2:-4502281 MS.gene54740:intron
ACAGCAACAGCAGCAATCTC+GGG 0.534699 6.2:+4500377 None:intergenic
AGTCGGAAAGGGCTGAGGAC+AGG 0.535860 6.2:-4502640 MS.gene54740:CDS
AAGCTTAGCGTCTTCCTCAT+CGG 0.537190 6.2:+4500676 None:intergenic
ACACTACTGGTGTCATAGCA+AGG 0.537234 6.2:-4506918 MS.gene54740:CDS
TGATTGTGTAGGTATGAAGA+GGG 0.537685 6.2:-4507907 None:intergenic
TTCCTCCTCATGATCTTCCC+GGG 0.538480 6.2:+4501484 None:intergenic
TTGGCCACTGGTACTGGAGG+TGG 0.538878 6.2:+4501821 None:intergenic
CGAGAGTGAAGGTGAAGCAG+AGG 0.539112 6.2:-4501429 MS.gene54740:CDS
ACAGAGGAAGCGTGAGAGCA+GGG 0.539160 6.2:-4506090 MS.gene54740:CDS
ATCGTTCAGACTATTGCTGC+AGG 0.539751 6.2:-4502851 MS.gene54740:CDS
ATGGAACATGATGATGTTGA+TGG 0.540343 6.2:-4501458 MS.gene54740:CDS
TGGAGGACGCCATCAATTTG+CGG 0.540685 6.2:+4499188 None:intergenic
ACTCTTTCAAACATATGCGC+AGG 0.541044 6.2:-4503709 MS.gene54740:CDS
ATCACGATCATCCAAGTTGG+AGG 0.541515 6.2:-4504060 MS.gene54740:CDS
GGAGGTGGAGTTAACGGAGG+AGG 0.541649 6.2:-4507192 MS.gene54740:CDS
AGCTGGATCGAGAGCCGAGA+AGG 0.542987 6.2:+4500422 None:intergenic
CCCAATCGCATGAGTCGGAA+AGG 0.547446 6.2:-4502652 MS.gene54740:CDS
ATTTAACACTTTCCTGCCAA+AGG 0.547821 6.2:-4506854 MS.gene54740:CDS
CAGTGAAGTGATCTTCAATA+CGG 0.549092 6.2:+4503413 None:intergenic
GTCTTATGTGCTATTCACAT+TGG 0.549324 6.2:-4500830 MS.gene54740:CDS
TTTATCACGATCATCCAAGT+TGG 0.549919 6.2:-4504063 MS.gene54740:CDS
GCACCTAACGTAGGAGGTGA+TGG 0.551899 6.2:-4502587 MS.gene54740:CDS
AAGATACAAGGAGAAGTACA+TGG 0.552134 6.2:-4503994 MS.gene54740:CDS
AACTCGAAATGTGGAATGAG+AGG 0.553226 6.2:+4502818 None:intergenic
CACTGGTACTGGAGGTGGAG+CGG 0.553326 6.2:+4501826 None:intergenic
GATAAAGAAAATGGTTCTGT+TGG 0.554787 6.2:-4502455 MS.gene54740:CDS
CGTATTGAAGATCACTTCAC+TGG 0.555491 6.2:-4503412 MS.gene54740:intron
ATTACAGGCAGAGCATGAGT+TGG 0.556003 6.2:+4503206 None:intergenic
GCGGCAAATGCAAGTAGATA+AGG 0.557680 6.2:-4506294 MS.gene54740:intron
GCATTGTATAATTTGCTCGA+TGG 0.557862 6.2:-4500907 MS.gene54740:CDS
CGACCCTTTGCTTCATCACG+TGG 0.558667 6.2:-4507843 MS.gene54740:CDS
GAACATAGGCGTGAGACGGA+TGG 0.558726 6.2:-4504032 MS.gene54740:CDS
ACTAACACACCATTGGCCAC+TGG 0.561768 6.2:+4501809 None:intergenic
GCATGAGTCGGAAAGGGCTG+AGG 0.562256 6.2:-4502645 MS.gene54740:CDS
GAGGATAACTTTGTTGCCTA+CGG 0.563304 6.2:-4501692 MS.gene54740:CDS
CTCCTCAGAGTCGGCATTCG+GGG 0.564679 6.2:+4501712 None:intergenic
GAAAAGTCAAACTCGAAATG+TGG 0.564709 6.2:+4502809 None:intergenic
TTGATTGTGTAGGTATGAAG+AGG 0.565183 6.2:-4507908 None:intergenic
AAAGAAAATGGTTCTGTTGG+TGG 0.565258 6.2:-4502452 MS.gene54740:CDS
GACGGATGGAGGTAAAGAGA+AGG 0.565586 6.2:-4504018 MS.gene54740:CDS
CCAATCGCATGAGTCGGAAA+GGG 0.570311 6.2:-4502651 MS.gene54740:CDS
TACAGGATGTACCTTGCGTA+AGG 0.570569 6.2:+4501048 None:intergenic
TCAGCATCAGTAGGTCGGGT+TGG 0.570850 6.2:+4502112 None:intergenic
GAGAGTGAAGGTGAAGCAGA+GGG 0.572305 6.2:-4501428 MS.gene54740:CDS
ATCACCACGTGATGAAGCAA+AGG 0.572307 6.2:+4507839 None:intergenic
TATACGAGTATGAAAAGTCT+CGG 0.573722 6.2:-4500646 MS.gene54740:CDS
TGAATTTACAGTTTAGGTGG+AGG 0.574319 6.2:+4499171 None:intergenic
TGAAAGTTACGTACATCGGC+CGG 0.575323 6.2:+4503906 None:intergenic
AACAACGTTTGCAGTCGCTA+AGG 0.575680 6.2:+4503949 None:intergenic
TGTTGAAAATAAGATTAGTG+TGG 0.575761 6.2:-4503446 MS.gene54740:CDS
CGCTCCACCTCCAGTACCAG+TGG 0.577034 6.2:-4501825 MS.gene54740:CDS
TGCTGGTGATGAATGCTCCC+GGG 0.577683 6.2:-4501501 MS.gene54740:CDS
TAAAGAGAAGGAAAGATACA+AGG 0.578798 6.2:-4504006 MS.gene54740:CDS
TCTCGCTGTTTGTTCATCAG+AGG 0.579279 6.2:+4502334 None:intergenic
AGACATCAGCATCAGTAGGT+CGG 0.579798 6.2:+4502107 None:intergenic
GGTATATGTTCTCCTCATGA+AGG 0.581471 6.2:+4500573 None:intergenic
GTTCTCAACTAACACACCAT+TGG 0.587585 6.2:+4501802 None:intergenic
ATCTGTGACTTCCGGAAGCG+AGG 0.588696 6.2:-4503735 MS.gene54740:CDS
CATCTTTACCGTTATCAGAG+AGG 0.590079 6.2:-4501367 MS.gene54740:CDS
TTCATGAGGAGAACATATAC+CGG 0.591256 6.2:-4500571 MS.gene54740:CDS
CTGTGCATTTGAATCTCCGT+AGG 0.591326 6.2:+4501676 None:intergenic
GCAGATACATGCTTTGTGAG+AGG 0.591857 6.2:+4501326 None:intergenic
TGTGTATGAAGGTATGGTCA+AGG 0.592939 6.2:-4507234 MS.gene54740:intron
GTACATCGGCCGGTAGAAGC+CGG 0.594614 6.2:+4503916 None:intergenic
ACCAAGCATCGGTTCCAAGA+AGG 0.594776 6.2:+4502682 None:intergenic
TCGGTCTCGCAGGGAAAGAG+AGG 0.595406 6.2:-4499218 MS.gene54740:CDS
TCAGATCGCTGACTAGCAGT+AGG 0.596565 6.2:+4503791 None:intergenic
ATCATCTTCTCGGTCTCGCA+GGG 0.597004 6.2:-4499227 MS.gene54740:CDS
ATGTGAATAGCACATAAGAC+TGG 0.597599 6.2:+4500833 None:intergenic
GAAGCTGGTGAAGATGTGTC+AGG 0.597921 6.2:-4501533 MS.gene54740:CDS
GATAACACTTGATGAGGATG+AGG 0.597977 6.2:-4506824 MS.gene54740:CDS
ATGAAAAGTCTCGGAAACCT+GGG 0.598934 6.2:-4500637 MS.gene54740:CDS
GTTCTATGGCACCCGTGATG+CGG 0.601049 6.2:-4506313 MS.gene54740:CDS
GATGTACTTGATGATGATGA+TGG 0.602390 6.2:+4499247 None:intergenic
TGAAGCAGAAACAAGAGGAG+TGG 0.606159 6.2:-4503172 MS.gene54740:CDS
AACTTCCCAATCGCATGAGT+CGG 0.608820 6.2:-4502657 MS.gene54740:CDS
ACAGAGACATCAGCATCAGT+AGG 0.609672 6.2:+4502103 None:intergenic
AGGGTTAAGGAACTATTCAA+AGG 0.610387 6.2:-4506898 MS.gene54740:CDS
TGGGAAGTTACACCAAGCAT+CGG 0.611514 6.2:+4502671 None:intergenic
TATCACCTCCAGCCTCTGGA+CGG 0.613337 6.2:+4501597 None:intergenic
CCTCCAGTACCAGTGGCCAA+TGG 0.614685 6.2:-4501818 MS.gene54740:CDS
GATATCTTGCAACTCATCCA+AGG 0.615932 6.2:-4500018 MS.gene54740:intron
AGAAAATGGTTCTGTTGGTG+GGG 0.616773 6.2:-4502450 MS.gene54740:CDS
ACTTGTTCGTTATTCATGTG+AGG 0.618582 6.2:-4502756 MS.gene54740:CDS
CAGAGAACATAGGCGTGAGA+CGG 0.618824 6.2:-4504036 MS.gene54740:CDS
AAATGACCATCAGCAGCAAG+TGG 0.621642 6.2:+4504083 None:intergenic
AATGGAGCATGCTGTGTGGA+AGG 0.623233 6.2:+4506359 None:intergenic
TCACCACGTGATGAAGCAAA+GGG 0.623273 6.2:+4507840 None:intergenic
GGAGGACGAGCACCGTCCAG+AGG 0.623885 6.2:-4501609 MS.gene54740:CDS
GAAACTCATACCTCAACCAA+AGG 0.625270 6.2:+4502043 None:intergenic
AGAACTGTTTAACAAATCCA+GGG 0.625745 6.2:+4502357 None:intergenic
CACTACTGGTGTCATAGCAA+GGG 0.626400 6.2:-4506917 MS.gene54740:CDS
ACCAAAGGTACATTAGCACT+CGG 0.627066 6.2:+4502058 None:intergenic
TCTGTTGCACCTAACGTAGG+AGG 0.627975 6.2:-4502593 MS.gene54740:CDS
TTCAAACTTGGCATTCTCGG+CGG 0.628512 6.2:+4500882 None:intergenic
CCCGAATGCCGACTCTGAGG+AGG 0.630018 6.2:-4501711 MS.gene54740:CDS
TCGATTGAAGCAGAAACAAG+AGG 0.630186 6.2:-4503177 MS.gene54740:CDS
TGCACATGTTATCCTTCATG+AGG 0.631484 6.2:-4500585 MS.gene54740:CDS
AAAGTTATCCTCCTCAGAGT+CGG 0.632174 6.2:+4501703 None:intergenic
TTCTGATGCTGAAATTCACG+AGG 0.632331 6.2:-4502789 MS.gene54740:CDS
TTGGTCGAAATTCAATGCAG+CGG 0.637861 6.2:-4506337 MS.gene54740:CDS
ATATGAGATAACACTTGATG+AGG 0.638086 6.2:-4506830 MS.gene54740:CDS
ATGCTCCCGGGAAGATCATG+AGG 0.641352 6.2:-4501489 MS.gene54740:CDS
GTGTCAGGAAGTGAGTCTGC+TGG 0.641941 6.2:-4501518 MS.gene54740:CDS
CTCACTATAAACCTCAGTGA+TGG 0.642207 6.2:+4506566 None:intergenic
CATCACTGAGGTTTATAGTG+AGG 0.647512 6.2:-4506565 MS.gene54740:intron
CATAGGCGTGAGACGGATGG+AGG 0.647806 6.2:-4504029 MS.gene54740:CDS
GGAGAAGTTGAGCAGCGCTG+AGG 0.647893 6.2:-4505227 MS.gene54740:CDS
CCATTGGCCACTGGTACTGG+AGG 0.648776 6.2:+4501818 None:intergenic
TGAAGATGTGAAGGATTCAA+GGG 0.650035 6.2:-4501291 MS.gene54740:CDS
CTCCGCCGCCACCACCTCCG+GGG 0.650323 6.2:+4507211 None:intergenic
ATCCCCGAATGCCGACTCTG+AGG 0.663402 6.2:-4501714 MS.gene54740:CDS
GCAAGTACTGAATGATCACT+GGG 0.663594 6.2:-4503759 MS.gene54740:CDS
CAGAAACAAACCGAAATATG+GGG 0.665228 6.2:-4500111 MS.gene54740:CDS
CTCGTCAGCTCGTTTAGCAG+CGG 0.666549 6.2:+4503483 None:intergenic
AGATACAAGGAGAAGTACAT+GGG 0.666573 6.2:-4503993 MS.gene54740:CDS
TGAAATCTTTCATGACCTCG+AGG 0.667983 6.2:+4507061 None:intergenic
GATGGTAAAGCCGAGAGTGA+AGG 0.667991 6.2:-4501440 MS.gene54740:CDS
GAAATACGAGTCTAGAAATG+GGG 0.668085 6.2:-4501630 MS.gene54740:CDS
GTTCTACAGATCCTTACGCA+AGG 0.668821 6.2:-4501059 MS.gene54740:intron
AGTTGGAGGACAGAGAACAT+AGG 0.668867 6.2:-4504046 MS.gene54740:CDS
GAACGCCTATATGGTGACCA+TGG 0.669220 6.2:-4503260 MS.gene54740:CDS
TGAACTTTCACAAGGAACAG+AGG 0.670025 6.2:-4506106 MS.gene54740:CDS
CTCCCGGGAAGATCATGAGG+AGG 0.670660 6.2:-4501486 MS.gene54740:CDS
AACAATGATGAACTTTCACA+AGG 0.672817 6.2:-4506114 MS.gene54740:CDS
ATACGAGTCTAGAAATGGGG+AGG 0.677243 6.2:-4501627 MS.gene54740:CDS
TCAAACTGTTGCAACCGATG+AGG 0.677271 6.2:-4500690 MS.gene54740:CDS
TGTCTAAGACATCAAGACCA+TGG 0.679362 6.2:+4503243 None:intergenic
AAAATATGACATGTTCCTCG+AGG 0.689273 6.2:-4507076 MS.gene54740:CDS
GAACTGTTTAACAAATCCAG+GGG 0.690057 6.2:+4502358 None:intergenic
AGTTCTGTTGCACCTAACGT+AGG 0.693937 6.2:-4502596 MS.gene54740:CDS
ACATGATCTTGATAACAGCA+GGG 0.695132 6.2:-4506036 MS.gene54740:CDS
AGAGTGAAGGTGAAGCAGAG+GGG 0.699362 6.2:-4501427 MS.gene54740:CDS
ACCAAATGGAGCATGCTGTG+TGG 0.702132 6.2:+4506355 None:intergenic
ATTGGTTGTCAATTTCTGGG+AGG 0.705049 6.2:+4507152 None:intergenic
GGCGGAGGTGGAGTTAACGG+AGG 0.708735 6.2:-4507195 MS.gene54740:CDS
GAGCACCGTCCAGAGGCTGG+AGG 0.711256 6.2:-4501602 MS.gene54740:CDS
CTTTCCAGTAAAATGCCGTG+AGG 0.738774 6.2:+4500290 None:intergenic
GTCGGGTTGGAGTAAGTACG+CGG 0.743399 6.2:+4502125 None:intergenic
AGGTATGGTCAAGGCCCCGG+AGG 0.761750 6.2:-4507225 MS.gene54740:CDS
AGAGCACAAGACCATCACTG+AGG 0.814963 6.2:-4506577 MS.gene54740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.2 gene 4499183 4507916 4499183 ID=MS.gene54740
chr6.2 mRNA 4499183 4507916 4499183 ID=MS.gene54740.t1;Parent=MS.gene54740
chr6.2 exon 4507837 4507916 4507837 ID=MS.gene54740.t1.exon1;Parent=MS.gene54740.t1
chr6.2 CDS 4507837 4507916 4507837 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4507051 4507245 4507051 ID=MS.gene54740.t1.exon2;Parent=MS.gene54740.t1
chr6.2 CDS 4507051 4507245 4507051 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4506759 4506945 4506759 ID=MS.gene54740.t1.exon3;Parent=MS.gene54740.t1
chr6.2 CDS 4506759 4506945 4506759 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4506566 4506664 4506566 ID=MS.gene54740.t1.exon4;Parent=MS.gene54740.t1
chr6.2 CDS 4506566 4506664 4506566 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4506295 4506456 4506295 ID=MS.gene54740.t1.exon5;Parent=MS.gene54740.t1
chr6.2 CDS 4506295 4506456 4506295 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4505940 4506213 4505940 ID=MS.gene54740.t1.exon6;Parent=MS.gene54740.t1
chr6.2 CDS 4505940 4506213 4505940 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4505153 4505289 4505153 ID=MS.gene54740.t1.exon7;Parent=MS.gene54740.t1
chr6.2 CDS 4505153 4505289 4505153 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4504370 4504445 4504370 ID=MS.gene54740.t1.exon8;Parent=MS.gene54740.t1
chr6.2 CDS 4504370 4504445 4504370 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4504248 4504277 4504248 ID=MS.gene54740.t1.exon9;Parent=MS.gene54740.t1
chr6.2 CDS 4504248 4504277 4504248 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4503920 4504107 4503920 ID=MS.gene54740.t1.exon10;Parent=MS.gene54740.t1
chr6.2 CDS 4503920 4504107 4503920 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4503668 4503822 4503668 ID=MS.gene54740.t1.exon11;Parent=MS.gene54740.t1
chr6.2 CDS 4503668 4503822 4503668 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4503413 4503540 4503413 ID=MS.gene54740.t1.exon12;Parent=MS.gene54740.t1
chr6.2 CDS 4503413 4503540 4503413 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4503048 4503302 4503048 ID=MS.gene54740.t1.exon13;Parent=MS.gene54740.t1
chr6.2 CDS 4503048 4503302 4503048 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4502282 4502926 4502282 ID=MS.gene54740.t1.exon14;Parent=MS.gene54740.t1
chr6.2 CDS 4502282 4502926 4502282 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4502054 4502148 4502054 ID=MS.gene54740.t1.exon15;Parent=MS.gene54740.t1
chr6.2 CDS 4502054 4502148 4502054 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4501244 4501855 4501244 ID=MS.gene54740.t1.exon16;Parent=MS.gene54740.t1
chr6.2 CDS 4501244 4501855 4501244 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4501060 4501157 4501060 ID=MS.gene54740.t1.exon17;Parent=MS.gene54740.t1
chr6.2 CDS 4501060 4501157 4501060 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4500801 4500939 4500801 ID=MS.gene54740.t1.exon18;Parent=MS.gene54740.t1
chr6.2 CDS 4500801 4500939 4500801 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4500562 4500714 4500562 ID=MS.gene54740.t1.exon19;Parent=MS.gene54740.t1
chr6.2 CDS 4500562 4500714 4500562 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4500290 4500453 4500290 ID=MS.gene54740.t1.exon20;Parent=MS.gene54740.t1
chr6.2 CDS 4500290 4500453 4500290 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4500019 4500130 4500019 ID=MS.gene54740.t1.exon21;Parent=MS.gene54740.t1
chr6.2 CDS 4500019 4500130 4500019 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
chr6.2 exon 4499183 4499329 4499183 ID=MS.gene54740.t1.exon22;Parent=MS.gene54740.t1
chr6.2 CDS 4499183 4499329 4499183 ID=cds.MS.gene54740.t1;Parent=MS.gene54740.t1
Gene Sequence

>MS.gene54740

ATGAAGAGGGCTAGAGATGATATTTACTCTGCTTCTGCTTCTCAATTCAAACGACCCTTTGCTTCATCACGTGGTGATTCGTATGTTTTTTGATCTTGATTTTATTAATATTATCATTTGAATTTGAAAATTTGATTATGGTATTTTTTTTGCCTTATTTTGTGTTAATGCACCAATTTTGTTTTTTCAGTATTTTGGGTTAGTTTTGTGCCCTAATTTTGTGTTTCACTGTTGAATTGTTGAATTTGAATTCATATACTTATATCTATTTCACTTATGGTGTGAAATTGTTGTTGAATTTCATTACGGTTATGTTTGATTTGAATTTAATTTGATTTGGAATTAGTTTTGTGCCCTAATTTTGTGTTTCACTGTTGAATTTTAAATTTTGAATTCATATACCTATATCTATCTCACTTGTGGTGTTTAATTGTTGTCAAATTTCATTAGGGTTATGTTTCATTTGAGTTTAAATTGATTGTGGAGTTTTTGTATAAAACTTACTAGGCAAGTAATACGAGTTATGTTGAAAATTGAAGAACTCCTTGTGTGCATGTATTTGTGGATTGAAGAATATTATGAATTTTGATAGTGTTGTAGGTTGTGATTAGCATGTTGTAGTTGTTGATAATTAGGGTTTCTGAAATTGTGATTGCATTTTGTGTATGAAGGTATGGTCAAGGCCCCGGAGGTGGTGGCGGCGGAGGTGGAGTTAACGGAGGAGGAGGTGGGGGAGCAACTACCTCCCAGAAATTGACAACCAATGATGCTTTATCCTATTTGAAGGAAGTGAAAGACATGTTTCAGGATCAAAAAGAAAAATATGACATGTTCCTCGAGGTCATGAAAGATTTCAAGGCTCAAAAGTATGTTCTTAAACATTTGTACGTTTTGTAATGATTTTGAATGACGGAACATTGTGCCTAAACAATCAGGGGATCTTAATATTATTTATTTTTGGCTGTTTCCAGGACTGACACTACTGGTGTCATAGCAAGGGTTAAGGAACTATTCAAAGGTCACAACCATTTGATTTTTGGATTTAACACTTTCCTGCCAAAGGGATATGAGATAACACTTGATGAGGATGAGGACGAAGCTCCTCCGAAGAAAACGGTTGAATTTGAAGAAGCTATTAGTTTTGTGAACAAGATAAAGGTAATGTACTTTTTTTTTCTTCCATTCCAGTTACCAAGTTAGTTTACCGGTATAATTGATTCATAGCTTTAATTGGTTGGTTTTTCTTCCACAGAAACGTTTCCAAAATGATGAACATGTTTACAAATCATTTTTGGACATTTTGAATATGTATCGCAAAGAGCACAAGACCATCACTGAGGTTTATAGTGAGGTAATAGCTTTGTCCTATAAACTTTAGGCACTTCGCTTTCTTTTTTCTTGTTTTTTTTGTTTAAAAAAATTGGCTGAAATGTTTACTTTTTTTAAATAAAAAACTCTAGGTTGCCACCCTTTTTAAGTCGCATGGAGATTTGCTCGATGAGTTCACCAGATTCTTACCAGATAATTCTTCAGCACCTTCCACACAGCATGCTCCATTTGGTCGAAATTCAATGCAGCGGAGTTCTATGGCACCCGTGATGCGGCAAATGCAAGTAGATAAGGTAGTAAGAGCCTTCCTCTTCATAACGATTTTTGTACTTTTTGAAAGAAAAGAACATTGTCATAAAAACTTACTTTTACAGCAACGATATCGGCGAGACCGATTTTCTTCTCATGATCGTGATATGAGTGTTGAACGTCCTGATCTGGATGATGACAAAACAATGATGAACTTTCACAAGGAACAGAGGAAGCGTGAGAGCAGGGATAGAAGGATGCGCGATCACGATGATAGAGAACATGATCTTGATAACAGCAGGGATTTGCACTCACAACGCTTTCCTGACAAAAAGAAATCTGTTAAGAAGACTGAAGCTTATGACTTTGCTGCTCATGATGATAAAGATGGAATGAAGCGTAAGATATCATACTATGCTTTGGATTATTACATTTGAGTCTATATTTATTACATTTTTGGTTCTTACTGTTATTTTAGTTTGCCTGTGAACCATCATGTTTTCAATATGCTGTAGATTTCTATATACTTGTGTTATAAAATATAACGGTTATTGGCACTAGTGTCACAGCCTAAAAAAATTAAGAGGAAATGAAACTATAATTACTTTTCTATATTATCAAACACTCAAATTTTAGATACAGAGAGATTGACGTAGATCAATATGTGTGGACGTAGATCAATTGTTATAAAACTATCAAATTTGACTCCACTATTTCTTCTTATTTGTTTGGATACAAGACTCCACTATTTATATTACCGCCATATCACTTTTTCTTTCTTTACAAGTTGTTAGATGCATAGAACTTACTATTAGGACGGTAACAATTGTTGAATGATGCATTCCCATGTTTGGAGTTAAAAAAAATGAACGTATGCATGATTAAATTTAGCCATGCCGAGTTTCTTGACTTTTTTTTATTAGTATTTGTTTGTCCTGTTAGCATCTTTCTTGATTATCAGCTTTCTTGATTTTTATCTGAGACAATATTGACCTTTATAATTTTCTATGTTTTGTTACTTATTTATTTAATTTTTGTATTTGTAGCAGTCATGTATAGTCAAGCAATCAGTTTCTGCGATAAAGTTAAGGAGAAGTTGAGCAGCGCTGAGGACTACCAAACATTCTTGAAGTGTCTTAATATTTTTGGCAACGGAATTATAAAAAAGAATGATTTACAAAATTTGGTATGTGCTTCATTTTCGTATTGGATCGTTTATGTCACGTTGCTCCCTTTAGATCTCTAGGACTTTTATAAAGTTTCATTAGTTGAATTATGAAAATTAGTTAGTTAACATTATTTACTACTCAAATGCTTTCACTTATGGGATATGCTACTTTGGACAAATTATTTGGTACGCATTTGCACAGCCTTAGCCGAAAAGAAAATGATAGGAGCTTTCATAGTGTGTATGAAAGGTTTAGGGTCACAGAAAACTGCCAGTCTCTTGTTAAACTTGGAACTTCTGATCTAGGCTCACATTTTTGGCTGCACTATAGCAAGTGTCTGAGATTGTAATCTAATATTGCATTTTCTTATATAATTATACATATTTAGATTGGATGTATATGGTTGTGTAAGTTCCCAACCCTAGTTTTTGGATTGTCATTCTGGTTTGTGCCTGGGATGTTTGAATAACTTTCAGCCACTAACAGAAGATGTTACTTCTCTCTTCAAGTTAAACTTAAATGTATAAAATTATGTAACGAGTTTGAAAGAATTTCAATAGTATTCCAATTTATCATTTTCTGTTGTACTCTAATGTAATGTATATGTTTTATCAATTCATTGAAGTAGGCGATTACTTTGTTAATTTCACTATCTCATAAGCATTACCTTGTGAGTTCTATTGACTCCAGAGCAATTTATATCCTTTTGAAATGTATATTTCAGGTGACCGATTTGCTTGGAAAGCATTCTGATCTAATGAGCGAATTCAATGATTTCTTAGAGCGATGTGAAAATATTGGTAATTACTCTTCAACTCTTCTGTTTATTGTTGTCGATGTTATCATATTTACTCATGCCTTGGGGTTTTCTTGTGCCTATTTGTTTTTGCAGACGGGTTCCTTGCTGGTGTCATGAGTAAAAGTATGTTTATGCTTATATCATTACAATTTCTTACTTCATTTAAGGAGTCATTCAAATGATGTTGAATTAGCTGAATAATTTAAGTATTTTTTTTTTCATTCATTTGGTTAATTTTATCGTTGGAATTATATTGATTTTAGAGCCACTTGCTGCTGATGGTCATTTATCACGATCATCCAAGTTGGAGGACAGAGAACATAGGCGTGAGACGGATGGAGGTAAAGAGAAGGAAAGATACAAGGAGAAGTACATGGGAAAATCCATTCAAGAACTTGACCTTAGCGACTGCAAACGTTGTTCTCCGAGCTACCGGCTTCTACCGGCCGATGTACGTAACTTTCAAATCGATTACTTTTCTTTTCTTGTTGGTTTTGTCAAATGCACTGTTCTTGTGAAGCTCCTTCACACCTTTTGTGTTCTTGCAGTATCCAATTCCTACTGCTAGTCAGCGATCTGAGCTTGGTGCGCAAGTACTGAATGATCACTGGGTATCTGTGACTTCCGGAAGCGAGGATTACTCTTTCAAACATATGCGCAGGAATCAATACGAAGAAAGCTTGTTCAGATGTGAAGATGACAGGTAAAAATTGTTCTGTTTTGCTGCTCCTGAATGCAATGTTCATTTCAGAGTCATTAGTTTGTCTTAAGATGTAGTGTGTCGACATTGTTAGCATTTAGAGGTGATAACATTGTTATTTCTGATGTAGGTTTGAGCTGGACATGTTATTAGAGTCTGTAAGTTCCGCTGCTAAACGAGCTGACGAGTTGTACAACAGCATTGTTGAAAATAAGATTAGTGTGGAGAGTCTAAGCCGTATTGAAGATCACTTCACTGGTATGTGTCAAAATAATCTCATTCTAAAGTGTTATTCACTGTAACCTTATTTCTCTACTTCGTTATAGCATTTTGAATTGATTTAATCCGATATATACACGTTTATGCAGTTCTAAATCTAAGGTGCATTGAACGCCTATATGGTGACCATGGTCTTGATGTCTTAGACATACTGCGTAAGAACCCAACTCATGCTCTGCCTGTAATATTGACTCGATTGAAGCAGAAACAAGAGGAGTGGAATAGGTGTCGTTCAGATTTCAATAAAGTTTGGGCTGACATTTATTCTAAAAATCACTACAAATCACTTGATCATCGTAGCTTCTATTTCAAGCAACAAGATTCGAAGAACTTGAGCACAAAATGTAAGTCAATCTTAAATAATAATGACTGAATTGCATTGTATACAGTACTAAATTGGTTGCTAGTTTAGTGGTATATCATCTTCGTAATCTGTTGCAATATTTCATGTTTGGCAATATACAGCTTTGGTGACTGAGATCAAAGAAATTAAAGAGAAGCAGCAGAAAGAGGATGACATCGTTCAGACTATTGCTGCAGGAGCAAAACATCCTCTCATTCCACATTTCGAGTTTGACTTTTCTGATGCTGAAATTCACGAGGACCTGTATAAACTTGTTCGTTATTCATGTGAGGAAGTATTCCAAAGTAAAGAGTTATTCAATAAAATTATGAGGCTCTGGAGTACCTTCTTGGAACCGATGCTTGGTGTAACTTCCCAATCGCATGAGTCGGAAAGGGCTGAGGACAGGAAAGCAGGACATAACGCTCGAAGTTCTGTTGCACCTAACGTAGGAGGTGATGGAAGCCCCAACAGAGAGTCCAATTCAAGGCTACCAAAATCTGACAAGAATGAAGTTGATGGTAGAGTAGGTGAAGTTAAAAATGGTCACCGGACTAGCGTAGCTGCCAATGATAAAGAAAATGGTTCTGTTGGTGGGGAGCTTGTTAGTAGAGATGATCATTTAATGGAAAATAAAGGGCAGAAAAGTGTTGAAAACAGTGACAAAGCCCCTGGATTTGTTAAACAGTTCTCCTCTGATGAACAAACAGCGAGAAACTCTGCTGCTGTCACAATTAGAGGCGAAAGCAGTGTGCATATGTCTCCAGGTCCGTATACAACATAGTTGTGTACCCCATGATTTTTGTTTTTCTATTTATATTTACTCAATTTAATTCTTTTGCAGTTCTGTTTAATTAATTTTGTTGTTGTCAGAATACTAAATTTTGTTTATATTTCAAGGCCGCGTACTTACTCCAACCCGACCTACTGATGCTGATGTCTCTGTTGCTGTAGTCATAGCCAAGTCTCCGAGTGCTAATGTACCTTTGGTTGAGGTATGAGTTTCCATCTATGTCCAATGTCGAGTTCCTTTTATCTAGTTTTTATACTTGAAAGATAAGCTAATTTTTTAACAAAGATCTTTTTTTTTTTTTTTAAAATACCGCTTGACCCAAACATATCCTTAGTCGAAGGGTTTTATTTTTTTAATGCTTATATTGATATCGGTATGTCGGCTTATATCTGTGTCTCAGGGCGTTGCCGCTCCACCTCCAGTACCAGTGGCCAATGGTGTGTTAGTTGAGAACAGTAAAGTTAAAAGCAATGAAGAATCTTCTGTGCCTTGCAAAGTTGAAAAAGAAGAGGGTGAGTTATCCCCGAATGCCGACTCTGAGGAGGATAACTTTGTTGCCTACGGAGATTCAAATGCACAGTCAAATCACAATGACGATAGAAGGAAATACGAGTCTAGAAATGGGGAGGACGAGCACCGTCCAGAGGCTGGAGGTGATAATGATGCAGATGCTGATGACGAAGACAGCGAAAATGTTTCTGAAGCTGGTGAAGATGTGTCAGGAAGTGAGTCTGCTGGTGATGAATGCTCCCGGGAAGATCATGAGGAGGAAGATATGGAACATGATGATGTTGATGGTAAAGCCGAGAGTGAAGGTGAAGCAGAGGGGATGTGTGATGCTGATGCACAAACTGGAGTAGATGGCTCATCTTTACCGTTATCAGAGAGGTTTCTGTCAACTGTGAAACCTCTCACAAAGCATGTATCTGCAGTTTCATTTGTTGAAGATGTGAAGGATTCAAGGGTGTTTTACGGAAATGATGATTTCTTTGTTCTCTTTAGGCTTCATCAAGTAAGAAAAATGTTGATTCTTTTTTGTTTATGTCGAAAAAATTTCCTTTGTGTTGATGTCTTATGTATTCTTTATGAACTTGGCAGATTCTTTATGAAAGGATCTTATCTGCAAAAGAAAATTCAACAAGCGCTGAAGTGAAATGGAAAACAAAAGATTCTAGTTCTACAGATCCTTACGCAAGGTACATCCTGTAATTATGTATTAGGTTTAAACTATATAATAACATTAGTACTTGTACTTTTCAATTCAATCAACATCATTTAGTTTTTATCTTATTTTCCACTGTTCGTTTTTTGTTTAGATTTATGGATGCATTGTATAATTTGCTCGATGGATCCGCCGAGAATGCCAAGTTTGAAGATGAATGTCGAGCAATTCTTGGAAACCAGTCTTATGTGCTATTCACATTGGACAAGTTAATATATAAATTAATCAGACAGGTATATTGCTTTATTCATTTGTCCTACATACTTGTCATTTGTTTCTCTTTAATGGCTGTAAATGTAATAATATACCTACACTGCAGCTTCAAACTGTTGCAACCGATGAGGAAGACGCTAAGCTTCTCCAATTATACGAGTATGAAAAGTCTCGGAAACCTGGGAAATTAAATGATTCAGTATATCATTCAAATGCACATGTTATCCTTCATGAGGAGAACATATACCGGTTTCAATCTGTAGGTCCTTTGTAACCTGGAGCATTTGTTTTCTACTTCGTGATTTGTTATTTTTATCGTTATTGTTATCTGTTGTTAATGTTATTTTGCATTGTTATCTTATTGCAGTCGTCTAGTCCTTCTCGGCTCTCGATCCAGCTCATGGACAATATGAATGAAAAGCCCGAGATTGCTGCTGTTGCTGTTGATCCAGATTTTTCATTTTATCTGCACAATGATTTTCTGTCTGTCCTCCCTGGCAAAAAGGAGCCTCACGGCATTTTACTGGAAAGGTACATCTTTTGGGGACTTAAAATCTATAAAAAATTATAGAGGCTAAAATCGACATTTGTTCAATTTATCATCCATCAATTCTTTATTTTAGCATTTTTATTTATTCATATTCAATTTAGTGATGCATAAGATTCTTATTTTTATTTTGCTCTTCTCAGAAACAAACCGAAATATGGGGACTTAGATGAGCTTTCTGCAATTTGTGCTGTAATGGAAGATGTCAAAGTAGTTAATGGATTGGAATGCAAGATATCTTGCAACTCATCCAAGGTATGCTTCTTTTTCATACTTGTGCTTGTGATTTTCCATTTTGCAGGTTAGTACTTTATTTATAACTAGTTAAAACACATGCAATGCACCTTTTATCAATATTTAAATCATTAAGATGAAATAAATAAATAAATATATTAGAAAGTTTATTTTGATTCCTTAATAAGTTTTTCCTCATTTTTGTAGGATGAATAAACAATATTTTACAACTATTGGTATATAATTGGTATTAGAGATGAGAAACAAATGTTAATCTAACAAAGGAATTAGGTCTTTGTGCAACCGTTGTTTAGTCTGGAAACTTGTACAACACACCACCGTAGTTCTTGTAGCACCTGAGTTTTTATGTGTCATTATGAACCCTCTGGATTTGAAATGTTTGATTATATATAGTAGAATTTGAAGAACCTATATTTACAAGGTAATTTGATATTATTATTATTATCAGAATTTATTATTTATTATTTTTTGCAATACTTATTATTTCTTGAAAACCAATGAAAACAACCGAAAGCTTTTTCCCACTAAATTGTGTCAAAATAATTAACAAAAACAATGTTATAAAGTCTTGTCATGAATTAAATCCAATCCAAATGATGAATTGTTTAATTCTCAACTCTCTTGATATAATGTCATATAGTTTTTCTATGGCATATAGTTTTCTTCATGTTCACTATTTTCATCTGCAGATTTCTTATGTTCTCGACACACAAGATTTTTTCTTCCGACCAAGAAGGAAAAGACGAACACCATCATCATCATCAAGTACATCATCTTCTCGGTCTCGCAGGGAAAGAGAGGAAAGATTCCGCAAATTGATGGCGTCCTCCACCTAA

Protein sequence

>MS.gene54740.t1

MKRARDDIYSASASQFKRPFASSRGDSYGQGPGGGGGGGGVNGGGGGGATTSQKLTTNDALSYLKEVKDMFQDQKEKYDMFLEVMKDFKAQKTDTTGVIARVKELFKGHNHLIFGFNTFLPKGYEITLDEDEDEAPPKKTVEFEEAISFVNKIKKRFQNDEHVYKSFLDILNMYRKEHKTITEVYSEVATLFKSHGDLLDEFTRFLPDNSSAPSTQHAPFGRNSMQRSSMAPVMRQMQVDKQRYRRDRFSSHDRDMSVERPDLDDDKTMMNFHKEQRKRESRDRRMRDHDDREHDLDNSRDLHSQRFPDKKKSVKKTEAYDFAAHDDKDGMKLMYSQAISFCDKVKEKLSSAEDYQTFLKCLNIFGNGIIKKNDLQNLVTDLLGKHSDLMSEFNDFLERCENIDGFLAGVMSKKPLAADGHLSRSSKLEDREHRRETDGGKEKERYKEKYMGKSIQELDLSDCKRCSPSYRLLPADYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSAAKRADELYNSIVENKISVESLSRIEDHFTVLNLRCIERLYGDHGLDVLDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWADIYSKNHYKSLDHRSFYFKQQDSKNLSTKSLVTEIKEIKEKQQKEDDIVQTIAAGAKHPLIPHFEFDFSDAEIHEDLYKLVRYSCEEVFQSKELFNKIMRLWSTFLEPMLGVTSQSHESERAEDRKAGHNARSSVAPNVGGDGSPNRESNSRLPKSDKNEVDGRVGEVKNGHRTSVAANDKENGSVGGELVSRDDHLMENKGQKSVENSDKAPGFVKQFSSDEQTARNSAAVTIRGESSVHMSPGRVLTPTRPTDADVSVAVVIAKSPSANVPLVEGVAAPPPVPVANGVLVENSKVKSNEESSVPCKVEKEEGELSPNADSEEDNFVAYGDSNAQSNHNDDRRKYESRNGEDEHRPEAGGDNDADADDEDSENVSEAGEDVSGSESAGDECSREDHEEEDMEHDDVDGKAESEGEAEGMCDADAQTGVDGSSLPLSERFLSTVKPLTKHVSAVSFVEDVKDSRVFYGNDDFFVLFRLHQILYERILSAKENSTSAEVKWKTKDSSSTDPYARFMDALYNLLDGSAENAKFEDECRAILGNQSYVLFTLDKLIYKLIRQLQTVATDEEDAKLLQLYEYEKSRKPGKLNDSVYHSNAHVILHEENIYRFQSSSSPSRLSIQLMDNMNEKPEIAAVAVDPDFSFYLHNDFLSVLPGKKEPHGILLERNKPKYGDLDELSAICAVMEDVKVVNGLECKISCNSSKISYVLDTQDFFFRPRRKRRTPSSSSSTSSSRSRREREERFRKLMASST