Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54801.t1 | RHN81490.1 | 69.2 | 620 | 9 | 2 | 1 | 439 | 76 | 694 | 4.70E-232 | 813.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54801.t1 | Q93YR9 | 66.8 | 386 | 114 | 5 | 1 | 379 | 1 | 379 | 5.7e-146 | 518.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54801.t1 | G7I382 | 69.2 | 620 | 9 | 2 | 1 | 439 | 1 | 619 | 3.4e-232 | 813.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene54801.t1 | TF | B3-ARF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54801.t1 | MTR_1g094960 | 98.417 | 379 | 5 | 1 | 1 | 379 | 1 | 378 | 0.0 | 790 |
MS.gene54801.t1 | MTR_1g094960 | 94.915 | 59 | 3 | 0 | 381 | 439 | 561 | 619 | 8.49e-26 | 110 |
MS.gene54801.t1 | MTR_2g094570 | 69.149 | 376 | 104 | 6 | 10 | 379 | 2 | 371 | 1.53e-180 | 519 |
MS.gene54801.t1 | MTR_2g094570 | 69.149 | 376 | 104 | 6 | 10 | 379 | 2 | 371 | 2.59e-180 | 520 |
MS.gene54801.t1 | MTR_2g094570 | 69.149 | 376 | 104 | 6 | 10 | 379 | 58 | 427 | 1.05e-179 | 520 |
MS.gene54801.t1 | MTR_4g058930 | 69.554 | 381 | 104 | 7 | 8 | 379 | 1 | 378 | 7.63e-179 | 515 |
MS.gene54801.t1 | MTR_4g058930 | 69.554 | 381 | 104 | 7 | 8 | 379 | 1 | 378 | 2.21e-178 | 515 |
MS.gene54801.t1 | MTR_1g064430 | 64.921 | 382 | 112 | 6 | 13 | 379 | 21 | 395 | 2.77e-169 | 491 |
MS.gene54801.t1 | MTR_1g064430 | 64.136 | 382 | 115 | 5 | 13 | 379 | 34 | 408 | 4.67e-169 | 491 |
MS.gene54801.t1 | MTR_7g101280 | 58.747 | 383 | 143 | 6 | 10 | 379 | 22 | 402 | 2.75e-151 | 444 |
MS.gene54801.t1 | MTR_0041s0110 | 58.747 | 383 | 143 | 6 | 10 | 379 | 22 | 402 | 2.75e-151 | 444 |
MS.gene54801.t1 | MTR_7g101275 | 54.386 | 342 | 119 | 4 | 28 | 368 | 1 | 306 | 5.22e-126 | 371 |
MS.gene54801.t1 | MTR_0041s0120 | 53.801 | 342 | 133 | 6 | 28 | 368 | 1 | 318 | 8.82e-120 | 355 |
MS.gene54801.t1 | MTR_3g073420 | 46.684 | 377 | 172 | 6 | 16 | 379 | 16 | 376 | 4.77e-106 | 326 |
MS.gene54801.t1 | MTR_5g061220 | 42.597 | 385 | 181 | 10 | 7 | 379 | 7 | 363 | 4.45e-90 | 283 |
MS.gene54801.t1 | MTR_4g124900 | 41.160 | 362 | 165 | 9 | 14 | 367 | 18 | 339 | 2.88e-81 | 271 |
MS.gene54801.t1 | MTR_4g124900 | 41.160 | 362 | 165 | 9 | 14 | 367 | 18 | 339 | 2.92e-81 | 271 |
MS.gene54801.t1 | MTR_2g024430 | 40.691 | 376 | 148 | 9 | 16 | 375 | 17 | 333 | 3.69e-81 | 259 |
MS.gene54801.t1 | MTR_5g076270 | 40.761 | 368 | 170 | 8 | 9 | 367 | 14 | 342 | 1.43e-80 | 266 |
MS.gene54801.t1 | MTR_2g014770 | 38.889 | 396 | 187 | 9 | 15 | 399 | 51 | 402 | 3.34e-80 | 259 |
MS.gene54801.t1 | MTR_2g014770 | 38.889 | 396 | 187 | 9 | 15 | 399 | 51 | 402 | 1.55e-79 | 259 |
MS.gene54801.t1 | MTR_5g040880 | 39.370 | 381 | 163 | 9 | 11 | 379 | 3 | 327 | 2.83e-79 | 255 |
MS.gene54801.t1 | MTR_3g064050 | 40.385 | 364 | 169 | 8 | 13 | 367 | 20 | 344 | 9.68e-78 | 258 |
MS.gene54801.t1 | MTR_2g018690 | 39.510 | 367 | 176 | 7 | 9 | 367 | 13 | 341 | 5.95e-77 | 257 |
MS.gene54801.t1 | MTR_4g088210 | 39.899 | 396 | 185 | 11 | 12 | 395 | 33 | 387 | 6.68e-77 | 253 |
MS.gene54801.t1 | MTR_4g088210 | 39.500 | 400 | 189 | 11 | 12 | 399 | 33 | 391 | 8.32e-77 | 253 |
MS.gene54801.t1 | MTR_8g079492 | 39.071 | 366 | 178 | 7 | 9 | 367 | 13 | 340 | 8.80e-76 | 254 |
MS.gene54801.t1 | MTR_8g079492 | 39.071 | 366 | 178 | 7 | 9 | 367 | 13 | 340 | 8.97e-76 | 254 |
MS.gene54801.t1 | MTR_1g024025 | 40.548 | 365 | 166 | 10 | 14 | 368 | 38 | 361 | 4.34e-74 | 252 |
MS.gene54801.t1 | MTR_5g082140 | 37.696 | 382 | 178 | 8 | 8 | 379 | 1 | 332 | 3.43e-73 | 237 |
MS.gene54801.t1 | MTR_5g040740 | 39.142 | 373 | 155 | 9 | 16 | 373 | 9 | 324 | 6.43e-73 | 235 |
MS.gene54801.t1 | MTR_2g093740 | 39.946 | 368 | 161 | 8 | 19 | 367 | 56 | 382 | 1.52e-72 | 241 |
MS.gene54801.t1 | MTR_2g093740 | 39.946 | 368 | 161 | 8 | 19 | 367 | 56 | 382 | 5.85e-72 | 241 |
MS.gene54801.t1 | MTR_2g093740 | 39.946 | 368 | 161 | 8 | 19 | 367 | 56 | 382 | 1.13e-71 | 241 |
MS.gene54801.t1 | MTR_1g058210 | 35.979 | 378 | 192 | 5 | 8 | 379 | 1 | 334 | 2.91e-71 | 232 |
MS.gene54801.t1 | MTR_8g101360 | 39.566 | 369 | 173 | 8 | 9 | 367 | 21 | 349 | 1.19e-70 | 242 |
MS.gene54801.t1 | MTR_2g043250 | 40.443 | 361 | 169 | 11 | 14 | 367 | 18 | 339 | 2.23e-70 | 241 |
MS.gene54801.t1 | MTR_8g100050 | 37.566 | 378 | 188 | 7 | 10 | 379 | 50 | 387 | 5.89e-70 | 235 |
MS.gene54801.t1 | MTR_8g100050 | 37.566 | 378 | 188 | 7 | 10 | 379 | 50 | 387 | 2.41e-69 | 235 |
MS.gene54801.t1 | MTR_2g093740 | 38.583 | 381 | 161 | 9 | 19 | 367 | 56 | 395 | 8.09e-69 | 232 |
MS.gene54801.t1 | MTR_4g060460 | 38.462 | 377 | 154 | 9 | 19 | 367 | 54 | 380 | 8.68e-69 | 233 |
MS.gene54801.t1 | MTR_4g060460 | 38.462 | 377 | 154 | 9 | 19 | 367 | 54 | 380 | 9.31e-69 | 233 |
MS.gene54801.t1 | MTR_2g093740 | 38.583 | 381 | 161 | 9 | 19 | 367 | 56 | 395 | 3.11e-68 | 231 |
MS.gene54801.t1 | MTR_2g093740 | 38.583 | 381 | 161 | 9 | 19 | 367 | 56 | 395 | 4.57e-68 | 231 |
MS.gene54801.t1 | MTR_2g005240 | 37.105 | 380 | 184 | 7 | 11 | 379 | 15 | 350 | 1.29e-66 | 225 |
MS.gene54801.t1 | MTR_2g006270 | 36.585 | 369 | 177 | 11 | 19 | 379 | 13 | 332 | 1.20e-65 | 217 |
MS.gene54801.t1 | MTR_4g021580 | 38.400 | 375 | 177 | 10 | 15 | 379 | 15 | 345 | 1.84e-65 | 221 |
MS.gene54801.t1 | MTR_4g021580 | 38.400 | 375 | 177 | 10 | 15 | 379 | 15 | 345 | 2.61e-65 | 221 |
MS.gene54801.t1 | MTR_8g027440 | 39.612 | 361 | 165 | 10 | 16 | 367 | 26 | 342 | 1.04e-59 | 206 |
MS.gene54801.t1 | MTR_7g062540 | 37.097 | 372 | 178 | 10 | 8 | 368 | 3 | 329 | 2.96e-59 | 205 |
MS.gene54801.t1 | MTR_8g079492 | 40.136 | 294 | 137 | 5 | 75 | 367 | 3 | 258 | 1.24e-58 | 206 |
MS.gene54801.t1 | MTR_2g006380 | 33.947 | 380 | 180 | 13 | 19 | 385 | 20 | 341 | 1.49e-55 | 191 |
MS.gene54801.t1 | MTR_5g061890 | 35.121 | 373 | 183 | 14 | 16 | 379 | 9 | 331 | 2.50e-54 | 186 |
MS.gene54801.t1 | MTR_5g060780 | 34.853 | 373 | 184 | 14 | 16 | 379 | 9 | 331 | 5.05e-54 | 185 |
MS.gene54801.t1 | MTR_2g093740 | 42.231 | 251 | 108 | 3 | 118 | 367 | 38 | 252 | 3.43e-53 | 188 |
MS.gene54801.t1 | MTR_5g460920 | 34.316 | 373 | 186 | 13 | 16 | 379 | 9 | 331 | 4.87e-53 | 182 |
MS.gene54801.t1 | MTR_2g093740 | 42.231 | 251 | 108 | 3 | 118 | 367 | 38 | 252 | 5.89e-53 | 188 |
MS.gene54801.t1 | MTR_2g093740 | 40.152 | 264 | 108 | 4 | 118 | 367 | 38 | 265 | 1.50e-49 | 178 |
MS.gene54801.t1 | MTR_2g093740 | 40.152 | 264 | 108 | 4 | 118 | 367 | 38 | 265 | 2.03e-49 | 179 |
MS.gene54801.t1 | MTR_5g062970 | 41.294 | 201 | 99 | 3 | 16 | 206 | 35 | 226 | 5.55e-48 | 164 |
MS.gene54801.t1 | MTR_8g446900 | 31.804 | 327 | 180 | 7 | 53 | 379 | 1 | 284 | 1.95e-45 | 162 |
MS.gene54801.t1 | MTR_5g060630 | 32.419 | 401 | 191 | 16 | 16 | 379 | 9 | 366 | 6.17e-44 | 161 |
MS.gene54801.t1 | MTR_5g460740 | 32.419 | 401 | 191 | 16 | 16 | 379 | 9 | 366 | 6.17e-44 | 161 |
MS.gene54801.t1 | MTR_5g060770 | 35.333 | 150 | 86 | 4 | 63 | 212 | 6 | 144 | 3.24e-18 | 85.9 |
MS.gene54801.t1 | MTR_5g062960 | 41.121 | 107 | 56 | 3 | 277 | 379 | 1 | 104 | 1.65e-16 | 78.2 |
MS.gene54801.t1 | MTR_3g064050 | 45.000 | 80 | 42 | 2 | 289 | 367 | 29 | 107 | 3.41e-13 | 72.0 |
MS.gene54801.t1 | MTR_5g032260 | 40.426 | 94 | 54 | 2 | 277 | 369 | 49 | 141 | 1.47e-12 | 69.3 |
MS.gene54801.t1 | MTR_1g058350 | 35.780 | 109 | 67 | 2 | 113 | 218 | 71 | 179 | 2.89e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54801.t1 | AT4G30080 | 68.135 | 386 | 109 | 6 | 1 | 379 | 1 | 379 | 0.0 | 534 |
MS.gene54801.t1 | AT2G28350 | 67.268 | 388 | 92 | 7 | 13 | 379 | 4 | 377 | 1.04e-175 | 507 |
MS.gene54801.t1 | AT2G28350 | 67.268 | 388 | 92 | 7 | 13 | 379 | 4 | 377 | 1.04e-175 | 508 |
MS.gene54801.t1 | AT1G77850 | 45.676 | 370 | 183 | 6 | 16 | 379 | 16 | 373 | 4.73e-107 | 328 |
MS.gene54801.t1 | AT1G77850 | 45.676 | 370 | 183 | 6 | 16 | 379 | 16 | 373 | 5.05e-107 | 329 |
MS.gene54801.t1 | AT5G37020 | 40.385 | 364 | 169 | 8 | 13 | 367 | 16 | 340 | 1.12e-79 | 262 |
MS.gene54801.t1 | AT5G37020 | 40.385 | 364 | 169 | 8 | 13 | 367 | 16 | 340 | 2.90e-79 | 261 |
MS.gene54801.t1 | AT1G19220 | 40.811 | 370 | 173 | 9 | 5 | 367 | 9 | 339 | 6.66e-78 | 262 |
MS.gene54801.t1 | AT1G30330 | 40.379 | 369 | 171 | 9 | 9 | 367 | 14 | 343 | 1.35e-76 | 256 |
MS.gene54801.t1 | AT1G30330 | 40.379 | 369 | 171 | 9 | 9 | 367 | 14 | 343 | 1.35e-76 | 256 |
MS.gene54801.t1 | AT1G30330 | 39.835 | 364 | 171 | 8 | 13 | 367 | 17 | 341 | 2.36e-76 | 256 |
MS.gene54801.t1 | AT2G33860 | 39.196 | 398 | 191 | 10 | 15 | 403 | 52 | 407 | 2.32e-75 | 247 |
MS.gene54801.t1 | AT5G20730 | 39.835 | 364 | 169 | 10 | 13 | 367 | 18 | 340 | 7.71e-75 | 254 |
MS.gene54801.t1 | AT1G19850 | 40.431 | 371 | 165 | 11 | 11 | 368 | 35 | 362 | 1.42e-74 | 250 |
MS.gene54801.t1 | AT1G19850 | 39.892 | 371 | 167 | 11 | 11 | 368 | 46 | 373 | 1.78e-74 | 250 |
MS.gene54801.t1 | AT5G20730 | 39.726 | 365 | 169 | 11 | 13 | 367 | 18 | 341 | 1.55e-73 | 250 |
MS.gene54801.t1 | AT5G20730 | 39.726 | 365 | 169 | 11 | 13 | 367 | 18 | 341 | 1.98e-73 | 250 |
MS.gene54801.t1 | AT5G60450 | 37.949 | 390 | 182 | 7 | 8 | 379 | 30 | 377 | 1.66e-72 | 243 |
MS.gene54801.t1 | AT5G60450 | 38.421 | 380 | 174 | 7 | 18 | 379 | 64 | 401 | 3.05e-71 | 239 |
MS.gene54801.t1 | AT5G62000 | 37.600 | 375 | 186 | 6 | 13 | 379 | 55 | 389 | 2.99e-69 | 235 |
MS.gene54801.t1 | AT5G62000 | 37.600 | 375 | 186 | 6 | 13 | 379 | 55 | 389 | 3.18e-69 | 235 |
MS.gene54801.t1 | AT5G62000 | 37.600 | 375 | 186 | 6 | 13 | 379 | 55 | 389 | 3.18e-69 | 235 |
MS.gene54801.t1 | AT5G62000 | 37.600 | 375 | 186 | 6 | 13 | 379 | 55 | 389 | 3.18e-69 | 235 |
MS.gene54801.t1 | AT5G62000 | 37.600 | 375 | 186 | 6 | 13 | 379 | 55 | 389 | 3.18e-69 | 235 |
MS.gene54801.t1 | AT1G59750 | 38.070 | 373 | 182 | 7 | 15 | 379 | 18 | 349 | 1.27e-66 | 225 |
MS.gene54801.t1 | AT1G59750 | 38.070 | 373 | 182 | 7 | 15 | 379 | 18 | 349 | 1.27e-66 | 225 |
MS.gene54801.t1 | AT1G59750 | 38.070 | 373 | 182 | 7 | 15 | 379 | 18 | 349 | 1.36e-66 | 225 |
MS.gene54801.t1 | AT1G59750 | 38.070 | 373 | 182 | 7 | 15 | 379 | 18 | 349 | 1.41e-66 | 225 |
MS.gene54801.t1 | AT2G46530 | 39.096 | 376 | 170 | 13 | 16 | 379 | 18 | 346 | 3.04e-65 | 220 |
MS.gene54801.t1 | AT2G46530 | 39.096 | 376 | 170 | 13 | 16 | 379 | 39 | 367 | 4.63e-65 | 220 |
MS.gene54801.t1 | AT3G61830 | 35.545 | 422 | 213 | 11 | 7 | 415 | 13 | 388 | 2.54e-63 | 215 |
MS.gene54801.t1 | AT4G23980 | 36.207 | 406 | 199 | 11 | 16 | 404 | 9 | 371 | 2.94e-63 | 215 |
MS.gene54801.t1 | AT4G23980 | 37.802 | 373 | 180 | 10 | 16 | 379 | 9 | 338 | 3.64e-63 | 215 |
MS.gene54801.t1 | AT1G35540 | 34.483 | 406 | 207 | 11 | 12 | 403 | 20 | 380 | 2.66e-55 | 193 |
MS.gene54801.t1 | AT5G37020 | 39.437 | 284 | 131 | 6 | 86 | 367 | 1 | 245 | 7.33e-55 | 194 |
MS.gene54801.t1 | AT1G35520 | 36.264 | 364 | 177 | 10 | 12 | 367 | 20 | 336 | 7.17e-54 | 189 |
MS.gene54801.t1 | AT1G35240 | 35.616 | 365 | 178 | 11 | 12 | 367 | 20 | 336 | 1.48e-53 | 188 |
MS.gene54801.t1 | AT2G33860 | 39.721 | 287 | 134 | 5 | 118 | 403 | 2 | 250 | 1.58e-53 | 185 |
MS.gene54801.t1 | AT1G34310 | 36.043 | 369 | 181 | 9 | 19 | 379 | 27 | 348 | 4.58e-53 | 187 |
MS.gene54801.t1 | AT1G34170 | 34.109 | 387 | 190 | 13 | 19 | 387 | 25 | 364 | 2.69e-52 | 183 |
MS.gene54801.t1 | AT1G34390 | 35.616 | 365 | 176 | 12 | 12 | 367 | 20 | 334 | 2.73e-52 | 185 |
MS.gene54801.t1 | AT1G34410 | 35.165 | 364 | 181 | 10 | 12 | 367 | 20 | 336 | 1.42e-51 | 183 |
MS.gene54801.t1 | AT3G61830 | 36.188 | 362 | 179 | 10 | 60 | 415 | 22 | 337 | 1.50e-51 | 182 |
MS.gene54801.t1 | AT2G46530 | 40.226 | 266 | 114 | 8 | 117 | 379 | 36 | 259 | 1.09e-46 | 168 |
MS.gene54801.t1 | AT1G34170 | 32.558 | 387 | 170 | 13 | 19 | 387 | 25 | 338 | 1.12e-44 | 162 |
MS.gene54801.t1 | AT1G34170 | 32.558 | 387 | 170 | 13 | 19 | 387 | 25 | 338 | 6.88e-44 | 161 |
MS.gene54801.t1 | AT1G43950 | 40.654 | 214 | 108 | 7 | 12 | 217 | 20 | 222 | 3.87e-39 | 140 |
MS.gene54801.t1 | AT2G36080 | 34.234 | 111 | 69 | 2 | 112 | 218 | 32 | 142 | 9.15e-12 | 63.9 |
MS.gene54801.t1 | AT2G36080 | 34.234 | 111 | 69 | 2 | 112 | 218 | 32 | 142 | 9.15e-12 | 63.9 |
MS.gene54801.t1 | AT3G25730 | 32.824 | 131 | 76 | 2 | 118 | 246 | 183 | 303 | 1.82e-11 | 65.5 |
MS.gene54801.t1 | AT2G36080 | 34.234 | 111 | 69 | 2 | 112 | 218 | 32 | 142 | 1.91e-11 | 64.3 |
MS.gene54801.t1 | AT2G36080 | 34.234 | 111 | 69 | 2 | 112 | 218 | 32 | 142 | 2.06e-11 | 64.3 |
MS.gene54801.t1 | AT2G46870 | 34.906 | 106 | 62 | 2 | 110 | 215 | 27 | 125 | 5.50e-11 | 63.9 |
MS.gene54801.t1 | AT4G01500 | 33.654 | 104 | 66 | 1 | 118 | 221 | 36 | 136 | 7.18e-11 | 63.9 |
MS.gene54801.t1 | AT1G01030 | 36.842 | 95 | 59 | 1 | 113 | 207 | 51 | 144 | 7.60e-11 | 63.5 |
Find 83 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTAGGATTAGTTGGTTTA+TGG | 0.157206 | 1.2:-73236644 | MS.gene54801:CDS |
TTTGAAGAAGATTGTTTCTT+TGG | 0.183552 | 1.2:-73237348 | MS.gene54801:CDS |
GAGATCTTTGTGTTGGTATA+AGG | 0.249926 | 1.2:-73237011 | MS.gene54801:CDS |
ACGTAGACTTCATCAGTTTC+AGG | 0.253211 | 1.2:+73237411 | None:intergenic |
GAGAGGTGGAACACGGGTTT+TGG | 0.257788 | 1.2:+73237473 | None:intergenic |
TTCTCCTTGGCGCCTTCTTC+AGG | 0.267828 | 1.2:-73236575 | MS.gene54801:intron |
TTGAAACTGAGGATTCTTCT+AGG | 0.307810 | 1.2:-73236660 | MS.gene54801:CDS |
TCTAGGATTAGTTGGTTTAT+GGG | 0.316818 | 1.2:-73236643 | MS.gene54801:CDS |
GCTGTAAACTGTGCTGTTAA+TGG | 0.368748 | 1.2:-73236805 | MS.gene54801:CDS |
TGGAGGCTCTCCTTGGTATA+AGG | 0.368842 | 1.2:-73235218 | MS.gene54801:CDS |
TTTCTAATTCTTCTAGTACT+TGG | 0.397904 | 1.2:-73236948 | MS.gene54801:CDS |
ATGCAAATTCAATGGTGTTC+TGG | 0.400255 | 1.2:-73236703 | MS.gene54801:CDS |
GGAGAATCAGGCCAACGAAT+TGG | 0.402668 | 1.2:+73236592 | None:intergenic |
CTTTGGAAACAATGGCTTAG+AGG | 0.405587 | 1.2:-73237331 | MS.gene54801:CDS |
AGGATTCTTCTAGGATTAGT+TGG | 0.407748 | 1.2:-73236651 | MS.gene54801:CDS |
TTCGTTGGCCTGATTCTCCT+TGG | 0.409284 | 1.2:-73236588 | MS.gene54801:CDS |
AGAGCAAAGAAAGGTGGAAT+TGG | 0.414735 | 1.2:-73236988 | MS.gene54801:CDS |
AGAAGGCGCCAAGGAGAATC+AGG | 0.419546 | 1.2:+73236580 | None:intergenic |
AAATGGTGGTAATGATTTGA+TGG | 0.424677 | 1.2:-73236857 | MS.gene54801:CDS |
CAACACAAGCCTGATCTTGT+TGG | 0.424795 | 1.2:-73235190 | MS.gene54801:CDS |
CCTTTGTTTGGTGGTGGTGG+TGG | 0.436011 | 1.2:-73236913 | MS.gene54801:CDS |
TTAGCAATAATTGTCTGAAC+AGG | 0.436415 | 1.2:+73237180 | None:intergenic |
CCATCAGAAGAATTCTCAAC+TGG | 0.442393 | 1.2:+73235238 | None:intergenic |
AATGTCTTTGCAAAAGAAGC+TGG | 0.444449 | 1.2:+73237297 | None:intergenic |
GAAACCTTAACACAAAATTC+AGG | 0.450898 | 1.2:+73236742 | None:intergenic |
ATAGTCTCAGCACAGTATCT+AGG | 0.458408 | 1.2:+73237234 | None:intergenic |
CTTCTGATGGAGGCTCTCCT+TGG | 0.459576 | 1.2:-73235225 | MS.gene54801:CDS |
CGTAGACTTCATCAGTTTCA+GGG | 0.459745 | 1.2:+73237412 | None:intergenic |
TCACCTTTGTTTGGTGGTGG+TGG | 0.463200 | 1.2:-73236916 | MS.gene54801:CDS |
AGTGCTTAGATTCACAACTA+TGG | 0.464164 | 1.2:-73237599 | MS.gene54801:CDS |
AACCGTGTATCACCTTTGTT+TGG | 0.470136 | 1.2:-73236925 | MS.gene54801:CDS |
AAATGTTACTGCATTGTGTA+TGG | 0.470847 | 1.2:-73235161 | MS.gene54801:CDS |
AAGTTTAGACATATCTATAG+AGG | 0.484340 | 1.2:-73237135 | MS.gene54801:CDS |
AATCACAAGAAGCTTGTTGC+TGG | 0.491007 | 1.2:-73237066 | MS.gene54801:CDS |
AATCTGCAATGCAAATTCAA+TGG | 0.492272 | 1.2:-73236711 | MS.gene54801:CDS |
GAAGAATCCTCAGTTTCAAA+AGG | 0.493790 | 1.2:+73236664 | None:intergenic |
AATTCAGGAGTACTAGCTCT+TGG | 0.500520 | 1.2:+73236757 | None:intergenic |
GATTGTTTCTTTGGAAACAA+TGG | 0.500964 | 1.2:-73237339 | MS.gene54801:CDS |
GTTTGTGGTTATGGATTCCA+TGG | 0.512063 | 1.2:-73237637 | MS.gene54801:CDS |
CGTGTATCACCTTTGTTTGG+TGG | 0.513472 | 1.2:-73236922 | MS.gene54801:CDS |
ATAATATTGTTACCTGAAGA+AGG | 0.514309 | 1.2:+73236563 | None:intergenic |
CAACTATGGCACGCATGTGC+TGG | 0.516615 | 1.2:-73237585 | MS.gene54801:CDS |
TTTGGAAACAATGGCTTAGA+GGG | 0.516902 | 1.2:-73237330 | MS.gene54801:CDS |
AAGAGTGGTTCTGTTTCTGA+AGG | 0.520431 | 1.2:-73235298 | MS.gene54801:CDS |
AGTTCAAATATTTCAAAGAG+TGG | 0.525439 | 1.2:-73235313 | MS.gene54801:CDS |
GGTGGTTCTGGTTTCTTGTG+TGG | 0.526295 | 1.2:-73236895 | MS.gene54801:CDS |
AGGATATGCATGGACAGTGT+TGG | 0.527527 | 1.2:-73237158 | MS.gene54801:CDS |
GCAAAGAAAGGTGGAATTGG+TGG | 0.533246 | 1.2:-73236985 | MS.gene54801:CDS |
TAATGATTTGATGGGAAAAG+TGG | 0.533977 | 1.2:-73236848 | MS.gene54801:CDS |
CCAGTTGAGAATTCTTCTGA+TGG | 0.534523 | 1.2:-73235238 | MS.gene54801:CDS |
GTATCACCTTTGTTTGGTGG+TGG | 0.534706 | 1.2:-73236919 | MS.gene54801:CDS |
GAAAATGGAGATCTTTGTGT+TGG | 0.538803 | 1.2:-73237018 | MS.gene54801:CDS |
TGTTCAGACAATTATTGCTA+AGG | 0.546499 | 1.2:-73237178 | MS.gene54801:CDS |
TTCATAGCAGAGATTCTACA+AGG | 0.548674 | 1.2:+73237447 | None:intergenic |
TGTTGTTGATCCTTATACCA+AGG | 0.550241 | 1.2:+73235208 | None:intergenic |
GTTGTCAAAAGATGTCTCCT+TGG | 0.557297 | 1.2:+73237108 | None:intergenic |
AAGAAAGGTGGAATTGGTGG+TGG | 0.559157 | 1.2:-73236982 | MS.gene54801:CDS |
GCAATAATTGTCTGAACAGG+TGG | 0.564242 | 1.2:+73237183 | None:intergenic |
GCACGCATGTGCTGGTGCCA+TGG | 0.574468 | 1.2:-73237577 | MS.gene54801:CDS |
ATAAGGAGAGCAAAGAAAGG+TGG | 0.575173 | 1.2:-73236994 | MS.gene54801:CDS |
GGTATAAGGAGAGCAAAGAA+AGG | 0.576664 | 1.2:-73236997 | MS.gene54801:CDS |
ATTATTGCTAAGGATATGCA+TGG | 0.587806 | 1.2:-73237168 | MS.gene54801:CDS |
ATGTTCAAGATCCAATTCGT+TGG | 0.592882 | 1.2:-73236603 | MS.gene54801:CDS |
GTTGAGAATTCTTCTGATGG+AGG | 0.594043 | 1.2:-73235235 | MS.gene54801:CDS |
GAGATTCTACAAGGGATGAG+AGG | 0.595750 | 1.2:+73237456 | None:intergenic |
TCTGCTGAATAATCCAACCT+AGG | 0.603231 | 1.2:+73237207 | None:intergenic |
GCATGTTCTGCATGACCTTG+TGG | 0.603875 | 1.2:+73237516 | None:intergenic |
ATGTGAAATGTGTAAACCCT+TGG | 0.607377 | 1.2:-73235888 | MS.gene54801:intron |
AATCTCTGCTATGAAATACA+TGG | 0.608031 | 1.2:-73237439 | MS.gene54801:CDS |
AATGGTGGTAATGATTTGAT+GGG | 0.610306 | 1.2:-73236856 | MS.gene54801:CDS |
AAGGGATGAGAGGTGGAACA+CGG | 0.623921 | 1.2:+73237466 | None:intergenic |
CACCAAACAAAGGTGATACA+CGG | 0.628457 | 1.2:+73236923 | None:intergenic |
ACACAATCTGATGCAAACAA+TGG | 0.631167 | 1.2:-73237273 | MS.gene54801:CDS |
ATTCTACAAGGGATGAGAGG+TGG | 0.633006 | 1.2:+73237459 | None:intergenic |
AATGATTTGATGGGAAAAGT+GGG | 0.635170 | 1.2:-73236847 | MS.gene54801:CDS |
GTTACCTGAAGAAGGCGCCA+AGG | 0.651106 | 1.2:+73236571 | None:intergenic |
GAGTGGTGGCATTTGAACCA+TGG | 0.651177 | 1.2:+73237560 | None:intergenic |
AGGGATGAGAGGTGGAACAC+GGG | 0.668889 | 1.2:+73237467 | None:intergenic |
AAAGTCTTCTACTTTCCACA+AGG | 0.669890 | 1.2:-73237531 | MS.gene54801:CDS |
TCATAGCAGAGATTCTACAA+GGG | 0.672161 | 1.2:+73237448 | None:intergenic |
TCTGATGCAAACAATGGTGG+TGG | 0.672693 | 1.2:-73237267 | MS.gene54801:CDS |
CAATCTGATGCAAACAATGG+TGG | 0.683286 | 1.2:-73237270 | MS.gene54801:CDS |
ATATCTATAGAGGAACACCA+AGG | 0.796890 | 1.2:-73237125 | MS.gene54801:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTCCAAATAACAAAATA+TGG | + | chr1.2:73237439-73237458 | None:intergenic | 15.0% |
!! | CAAATAACAAAATATGGTTA+TGG | + | chr1.2:73237433-73237452 | None:intergenic | 20.0% |
!! | TAATTTAATTCTTGCTTAAC+AGG | + | chr1.2:73236574-73236593 | None:intergenic | 20.0% |
!!! | AAATCAGATGGATTATTATT+TGG | + | chr1.2:73237185-73237204 | None:intergenic | 20.0% |
!!! | CATAACCATATTTTGTTATT+TGG | - | chr1.2:73237431-73237450 | MS.gene54801:CDS | 20.0% |
! | AAAATATGGTTATGGTTATG+GGG | + | chr1.2:73237425-73237444 | None:intergenic | 25.0% |
! | AACTTAATAACTTTCTCTCA+AGG | + | chr1.2:73236762-73236781 | None:intergenic | 25.0% |
! | AAGTTTAGACATATCTATAG+AGG | - | chr1.2:73235657-73235676 | MS.gene54801:intron | 25.0% |
! | ACAAAATATGGTTATGGTTA+TGG | + | chr1.2:73237427-73237446 | None:intergenic | 25.0% |
! | AGTTCAAATATTTCAAAGAG+TGG | - | chr1.2:73237479-73237498 | MS.gene54801:CDS | 25.0% |
! | ATAATATTGTTACCTGAAGA+AGG | + | chr1.2:73236232-73236251 | None:intergenic | 25.0% |
! | CAAAATATGGTTATGGTTAT+GGG | + | chr1.2:73237426-73237445 | None:intergenic | 25.0% |
! | GTAATTGAGAAGATTAATGT+TGG | + | chr1.2:73237072-73237091 | None:intergenic | 25.0% |
! | TAAGTTTGTACCTACTTAAT+TGG | - | chr1.2:73236776-73236795 | MS.gene54801:CDS | 25.0% |
! | TGATTTATGAGGTGAAAATA+TGG | + | chr1.2:73237014-73237033 | None:intergenic | 25.0% |
! | TTTCTAATTCTTCTAGTACT+TGG | - | chr1.2:73235844-73235863 | MS.gene54801:intron | 25.0% |
!! | AAATTCTGGTCAAAGTTTTA+AGG | - | chr1.2:73237376-73237395 | MS.gene54801:CDS | 25.0% |
!! | ATTGTTATTGATACTCTTGT+AGG | + | chr1.2:73237309-73237328 | None:intergenic | 25.0% |
!! | TTGTTATTGATACTCTTGTA+GGG | + | chr1.2:73237308-73237327 | None:intergenic | 25.0% |
!! | TTTGAAGAAGATTGTTTCTT+TGG | - | chr1.2:73235444-73235463 | MS.gene54801:intron | 25.0% |
!!! | TTCACATTTTGAAGTAAATC+TGG | + | chr1.2:73236891-73236910 | None:intergenic | 25.0% |
AAATGTTACTGCATTGTGTA+TGG | - | chr1.2:73237631-73237650 | MS.gene54801:CDS | 30.0% | |
AATCTCTGCTATGAAATACA+TGG | - | chr1.2:73235353-73235372 | MS.gene54801:intron | 30.0% | |
AATCTGCAATGCAAATTCAA+TGG | - | chr1.2:73236081-73236100 | MS.gene54801:intron | 30.0% | |
AATGAGAACAGAAAAAATGG+TGG | - | chr1.2:73235921-73235940 | MS.gene54801:CDS | 30.0% | |
AATGATTTGATGGGAAAAGT+GGG | - | chr1.2:73235945-73235964 | MS.gene54801:intron | 30.0% | |
AATTCAGTGCATCAATAAGA+TGG | - | chr1.2:73236410-73236429 | MS.gene54801:intron | 30.0% | |
AGACTAATTCAACTAACCAA+GGG | + | chr1.2:73236923-73236942 | None:intergenic | 30.0% | |
AGATTAATGTTGGAGATTGA+TGG | + | chr1.2:73237062-73237081 | None:intergenic | 30.0% | |
ATAAACCTTGGTTTCTTTCT+TGG | + | chr1.2:73236984-73237003 | None:intergenic | 30.0% | |
ATTATTGCTAAGGATATGCA+TGG | - | chr1.2:73235624-73235643 | MS.gene54801:intron | 30.0% | |
GAAACCTTAACACAAAATTC+AGG | + | chr1.2:73236053-73236072 | None:intergenic | 30.0% | |
GGAAATGAGAACAGAAAAAA+TGG | - | chr1.2:73235918-73235937 | MS.gene54801:CDS | 30.0% | |
TAATGATTTGATGGGAAAAG+TGG | - | chr1.2:73235944-73235963 | MS.gene54801:intron | 30.0% | |
TATGGATCTTGAATAAACCT+TGG | + | chr1.2:73236996-73237015 | None:intergenic | 30.0% | |
TGTTCAGACAATTATTGCTA+AGG | - | chr1.2:73235614-73235633 | MS.gene54801:intron | 30.0% | |
TTACTTCAAGCCAATTAAGT+AGG | + | chr1.2:73236789-73236808 | None:intergenic | 30.0% | |
TTAGCAATAATTGTCTGAAC+AGG | + | chr1.2:73235615-73235634 | None:intergenic | 30.0% | |
TTGAAGGGAATTAAATCAGA+TGG | + | chr1.2:73237197-73237216 | None:intergenic | 30.0% | |
! | AAATGGTGGTAATGATTTGA+TGG | - | chr1.2:73235935-73235954 | MS.gene54801:intron | 30.0% |
! | AATGGTGGTAATGATTTGAT+GGG | - | chr1.2:73235936-73235955 | MS.gene54801:intron | 30.0% |
! | CTAACTCGTTTTCTCTTAAA+GGG | + | chr1.2:73235422-73235441 | None:intergenic | 30.0% |
! | GATTGTTTCTTTGGAAACAA+TGG | - | chr1.2:73235453-73235472 | MS.gene54801:intron | 30.0% |
! | TAACTCGTTTTCTCTTAAAG+GGG | + | chr1.2:73235421-73235440 | None:intergenic | 30.0% |
! | TACTCCTGAATTTTGTGTTA+AGG | - | chr1.2:73236046-73236065 | MS.gene54801:intron | 30.0% |
! | TCTAACTCGTTTTCTCTTAA+AGG | + | chr1.2:73235423-73235442 | None:intergenic | 30.0% |
! | TGTTAATGGAAGATCTTTTG+AGG | - | chr1.2:73236001-73236020 | MS.gene54801:intron | 30.0% |
! | TTTATGATGTCATGTTTTCC+AGG | - | chr1.2:73236851-73236870 | MS.gene54801:CDS | 30.0% |
!! | TCTAGGATTAGTTGGTTTAT+GGG | - | chr1.2:73236149-73236168 | MS.gene54801:intron | 30.0% |
!! | TTCTAGGATTAGTTGGTTTA+TGG | - | chr1.2:73236148-73236167 | MS.gene54801:intron | 30.0% |
AAAGTCTTCTACTTTCCACA+AGG | - | chr1.2:73235261-73235280 | MS.gene54801:CDS | 35.0% | |
AATGGTGAGAGATTGAAGTT+TGG | + | chr1.2:73236954-73236973 | None:intergenic | 35.0% | |
AATGTCTTTGCAAAAGAAGC+TGG | + | chr1.2:73235498-73235517 | None:intergenic | 35.0% | |
ACACAATCTGATGCAAACAA+TGG | - | chr1.2:73235519-73235538 | MS.gene54801:intron | 35.0% | |
AGTGCTTAGATTCACAACTA+TGG | - | chr1.2:73235193-73235212 | MS.gene54801:CDS | 35.0% | |
ATATCTATAGAGGAACACCA+AGG | - | chr1.2:73235667-73235686 | MS.gene54801:intron | 35.0% | |
ATCATCAACAACCGATAACT+AGG | - | chr1.2:73237270-73237289 | MS.gene54801:CDS | 35.0% | |
ATGCAAATTCAATGGTGTTC+TGG | - | chr1.2:73236089-73236108 | MS.gene54801:intron | 35.0% | |
ATGTGAAATGTGTAAACCCT+TGG | - | chr1.2:73236904-73236923 | MS.gene54801:CDS | 35.0% | |
ATGTTCAAGATCCAATTCGT+TGG | - | chr1.2:73236189-73236208 | MS.gene54801:intron | 35.0% | |
ATTCTAGCAAGTAGCAACTA+TGG | + | chr1.2:73236730-73236749 | None:intergenic | 35.0% | |
CTACAACAAGACATGTTTCT+TGG | - | chr1.2:73237224-73237243 | MS.gene54801:CDS | 35.0% | |
CTATGGTAGATAGTACTAGT+AGG | + | chr1.2:73236713-73236732 | None:intergenic | 35.0% | |
GAAAATGGAGATCTTTGTGT+TGG | - | chr1.2:73235774-73235793 | MS.gene54801:intron | 35.0% | |
GAAGAATCCTCAGTTTCAAA+AGG | + | chr1.2:73236131-73236150 | None:intergenic | 35.0% | |
GACTCAGAATCAATCAAAGA+TGG | + | chr1.2:73236285-73236304 | None:intergenic | 35.0% | |
GAGACTAATTCAACTAACCA+AGG | + | chr1.2:73236924-73236943 | None:intergenic | 35.0% | |
TCATAGCAGAGATTCTACAA+GGG | + | chr1.2:73235347-73235366 | None:intergenic | 35.0% | |
TGTTGTTGATCCTTATACCA+AGG | + | chr1.2:73237587-73237606 | None:intergenic | 35.0% | |
TTCATAGCAGAGATTCTACA+AGG | + | chr1.2:73235348-73235367 | None:intergenic | 35.0% | |
TTGAAACTGAGGATTCTTCT+AGG | - | chr1.2:73236132-73236151 | MS.gene54801:intron | 35.0% | |
TTTGGAAACAATGGCTTAGA+GGG | - | chr1.2:73235462-73235481 | MS.gene54801:intron | 35.0% | |
! | AGTTGCTACTTGCTAGAATT+TGG | - | chr1.2:73236731-73236750 | MS.gene54801:CDS | 35.0% |
! | GAGATCTTTGTGTTGGTATA+AGG | - | chr1.2:73235781-73235800 | MS.gene54801:intron | 35.0% |
! | GCATTGGAAGTTGATTTATG+AGG | + | chr1.2:73237025-73237044 | None:intergenic | 35.0% |
! | TAGAAGACTTTTGTGTTGAG+TGG | + | chr1.2:73235252-73235271 | None:intergenic | 35.0% |
! | TCTTTTGCATCAAGCATACA+GGG | - | chr1.2:73237137-73237156 | MS.gene54801:CDS | 35.0% |
! | TGAATCTAAGCACTTTTCAG+AGG | + | chr1.2:73235187-73235206 | None:intergenic | 35.0% |
! | TTCTTTTGCATCAAGCATAC+AGG | - | chr1.2:73237136-73237155 | MS.gene54801:CDS | 35.0% |
! | TTGGTAACTTGTCATTGTCA+AGG | - | chr1.2:73237243-73237262 | MS.gene54801:CDS | 35.0% |
! | TTTTCTGTTCCAACAAGATC+AGG | + | chr1.2:73237614-73237633 | None:intergenic | 35.0% |
!! | AGGATTCTTCTAGGATTAGT+TGG | - | chr1.2:73236141-73236160 | MS.gene54801:intron | 35.0% |
!! | ATTGATGGTGATGATGATGA+TGG | + | chr1.2:73237047-73237066 | None:intergenic | 35.0% |
!! | CTTTTCAGAGGTTTTTTCCA+TGG | + | chr1.2:73235175-73235194 | None:intergenic | 35.0% |
!! | GTGTTTTTGAGAGCAGAAAA+TGG | - | chr1.2:73235759-73235778 | MS.gene54801:intron | 35.0% |
!! | TGAGACTATTTTTCCTAGGT+TGG | - | chr1.2:73235572-73235591 | MS.gene54801:intron | 35.0% |
!! | TGTTGTAGTAGCTTGTTGAA+GGG | + | chr1.2:73237212-73237231 | None:intergenic | 35.0% |
!! | TTGTTGTAGTAGCTTGTTGA+AGG | + | chr1.2:73237213-73237232 | None:intergenic | 35.0% |
!!! | CAAAATGCCTTTTGAAACTG+AGG | - | chr1.2:73236121-73236140 | MS.gene54801:intron | 35.0% |
AACCGTGTATCACCTTTGTT+TGG | - | chr1.2:73235867-73235886 | MS.gene54801:intron | 40.0% | |
AACCTTGGTTTCTTTCTTGG+AGG | + | chr1.2:73236981-73237000 | None:intergenic | 40.0% | |
ACGTAGACTTCATCAGTTTC+AGG | + | chr1.2:73235384-73235403 | None:intergenic | 40.0% | |
AGAGCAAAGAAAGGTGGAAT+TGG | - | chr1.2:73235804-73235823 | MS.gene54801:intron | 40.0% | |
ATAAGGAGAGCAAAGAAAGG+TGG | - | chr1.2:73235798-73235817 | MS.gene54801:intron | 40.0% | |
ATACTCTTGTAGGGTCCATA+AGG | + | chr1.2:73237299-73237318 | None:intergenic | 40.0% | |
ATAGTCTCAGCACAGTATCT+AGG | + | chr1.2:73235561-73235580 | None:intergenic | 40.0% | |
CAATCTGATGCAAACAATGG+TGG | - | chr1.2:73235522-73235541 | MS.gene54801:intron | 40.0% | |
CACCAAACAAAGGTGATACA+CGG | + | chr1.2:73235872-73235891 | None:intergenic | 40.0% | |
CCAGTTGAGAATTCTTCTGA+TGG | - | chr1.2:73237554-73237573 | MS.gene54801:CDS | 40.0% | |
CCATCAGAAGAATTCTCAAC+TGG | + | chr1.2:73237557-73237576 | None:intergenic | 40.0% | |
CGTAGACTTCATCAGTTTCA+GGG | + | chr1.2:73235383-73235402 | None:intergenic | 40.0% | |
GCAATAATTGTCTGAACAGG+TGG | + | chr1.2:73235612-73235631 | None:intergenic | 40.0% | |
GGTATAAGGAGAGCAAAGAA+AGG | - | chr1.2:73235795-73235814 | MS.gene54801:intron | 40.0% | |
GTTGAGAATTCTTCTGATGG+AGG | - | chr1.2:73237557-73237576 | MS.gene54801:CDS | 40.0% | |
GTTGTCAAAAGATGTCTCCT+TGG | + | chr1.2:73235687-73235706 | None:intergenic | 40.0% | |
GTTTGTGGTTATGGATTCCA+TGG | - | chr1.2:73235155-73235174 | MS.gene54801:CDS | 40.0% | |
TCTGCTGAATAATCCAACCT+AGG | + | chr1.2:73235588-73235607 | None:intergenic | 40.0% | |
TTGTTGAGTGTGGGAAATTC+TGG | - | chr1.2:73237362-73237381 | MS.gene54801:CDS | 40.0% | |
! | AAGACTTTTGTGTTGAGTGG+TGG | + | chr1.2:73235249-73235268 | None:intergenic | 40.0% |
! | AGGAGACATCTTTTGACAAC+TGG | - | chr1.2:73235687-73235706 | MS.gene54801:intron | 40.0% |
! | CTTTGGAAACAATGGCTTAG+AGG | - | chr1.2:73235461-73235480 | MS.gene54801:intron | 40.0% |
! | GACATCTTTTGACAACTGGT+TGG | - | chr1.2:73235691-73235710 | MS.gene54801:intron | 40.0% |
! | GCTGTAAACTGTGCTGTTAA+TGG | - | chr1.2:73235987-73236006 | MS.gene54801:intron | 40.0% |
! | GGGTGCTTTTGCTTCAATAT+TGG | + | chr1.2:73237405-73237424 | None:intergenic | 40.0% |
! | TCATGTTTTCCAGGTAGTGT+GGG | - | chr1.2:73236860-73236879 | MS.gene54801:CDS | 40.0% |
! | TTCTTTCTTGGAGGTGTGAA+TGG | + | chr1.2:73236972-73236991 | None:intergenic | 40.0% |
! | TTGTCTTGCTTGTTGAGTGT+GGG | - | chr1.2:73237353-73237372 | MS.gene54801:CDS | 40.0% |
!! | AAGAGTGGTTCTGTTTCTGA+AGG | - | chr1.2:73237494-73237513 | MS.gene54801:CDS | 40.0% |
!! | AATCACAAGAAGCTTGTTGC+TGG | - | chr1.2:73235726-73235745 | MS.gene54801:intron | 40.0% |
!! | AATTCAGGAGTACTAGCTCT+TGG | + | chr1.2:73236038-73236057 | None:intergenic | 40.0% |
!! | GTGCTGAGACTATTTTTCCT+AGG | - | chr1.2:73235568-73235587 | MS.gene54801:intron | 40.0% |
AAGAAAGGTGGAATTGGTGG+TGG | - | chr1.2:73235810-73235829 | MS.gene54801:intron | 45.0% | |
AGGATATGCATGGACAGTGT+TGG | - | chr1.2:73235634-73235653 | MS.gene54801:intron | 45.0% | |
ATTCTACAAGGGATGAGAGG+TGG | + | chr1.2:73235336-73235355 | None:intergenic | 45.0% | |
CAACACAAGCCTGATCTTGT+TGG | - | chr1.2:73237602-73237621 | MS.gene54801:CDS | 45.0% | |
CACCTCCAAGAAAGAAACCA+AGG | - | chr1.2:73236976-73236995 | MS.gene54801:CDS | 45.0% | |
CCATAAGGAGGCCTAGTTAT+CGG | + | chr1.2:73237284-73237303 | None:intergenic | 45.0% | |
GAGATTCTACAAGGGATGAG+AGG | + | chr1.2:73235339-73235358 | None:intergenic | 45.0% | |
GCAAAGAAAGGTGGAATTGG+TGG | - | chr1.2:73235807-73235826 | MS.gene54801:intron | 45.0% | |
TCTGATGCAAACAATGGTGG+TGG | - | chr1.2:73235525-73235544 | MS.gene54801:intron | 45.0% | |
! | CGTGTATCACCTTTGTTTGG+TGG | - | chr1.2:73235870-73235889 | MS.gene54801:intron | 45.0% |
! | CTTGTCTTGCTTGTTGAGTG+TGG | - | chr1.2:73237352-73237371 | MS.gene54801:CDS | 45.0% |
! | GTATCACCTTTGTTTGGTGG+TGG | - | chr1.2:73235873-73235892 | MS.gene54801:intron | 45.0% |
! | GTCATGTTTTCCAGGTAGTG+TGG | - | chr1.2:73236859-73236878 | MS.gene54801:CDS | 45.0% |
!! | GGTGATGATGATGATGGCAT+TGG | + | chr1.2:73237041-73237060 | None:intergenic | 45.0% |
AAGGGATGAGAGGTGGAACA+CGG | + | chr1.2:73235329-73235348 | None:intergenic | 50.0% | |
CCGATAACTAGGCCTCCTTA+TGG | - | chr1.2:73237281-73237300 | MS.gene54801:CDS | 50.0% | |
CTCTTGTAGGGTCCATAAGG+AGG | + | chr1.2:73237296-73237315 | None:intergenic | 50.0% | |
GAGTGGTGGCATTTGAACCA+TGG | + | chr1.2:73235235-73235254 | None:intergenic | 50.0% | |
GCATGTTCTGCATGACCTTG+TGG | + | chr1.2:73235279-73235298 | None:intergenic | 50.0% | |
GGAGAATCAGGCCAACGAAT+TGG | + | chr1.2:73236203-73236222 | None:intergenic | 50.0% | |
TGGAGGCTCTCCTTGGTATA+AGG | - | chr1.2:73237574-73237593 | MS.gene54801:CDS | 50.0% | |
TGGTCCAAATTGAGCATGCC+TGG | + | chr1.2:73237165-73237184 | None:intergenic | 50.0% | |
! | TTCGTTGGCCTGATTCTCCT+TGG | - | chr1.2:73236204-73236223 | MS.gene54801:intron | 50.0% |
!! | GGTGGTTCTGGTTTCTTGTG+TGG | - | chr1.2:73235897-73235916 | MS.gene54801:CDS | 50.0% |
!! | TCACCTTTGTTTGGTGGTGG+TGG | - | chr1.2:73235876-73235895 | MS.gene54801:intron | 50.0% |
AGGGATGAGAGGTGGAACAC+GGG | + | chr1.2:73235328-73235347 | None:intergenic | 55.0% | |
CAACTATGGCACGCATGTGC+TGG | - | chr1.2:73235207-73235226 | MS.gene54801:CDS | 55.0% | |
CATCAAGCATACAGGGAGCC+AGG | - | chr1.2:73237144-73237163 | MS.gene54801:CDS | 55.0% | |
CCACCACCACCACCAAACAA+AGG | + | chr1.2:73235882-73235901 | None:intergenic | 55.0% | |
CTGGTTCATCCCACACTACC+TGG | + | chr1.2:73236872-73236891 | None:intergenic | 55.0% | |
CTTCTGATGGAGGCTCTCCT+TGG | - | chr1.2:73237567-73237586 | MS.gene54801:CDS | 55.0% | |
GGAGCCAGGCATGCTCAATT+TGG | - | chr1.2:73237158-73237177 | MS.gene54801:CDS | 55.0% | |
TTCTCCTTGGCGCCTTCTTC+AGG | - | chr1.2:73236217-73236236 | MS.gene54801:intron | 55.0% | |
! | GAGAGGTGGAACACGGGTTT+TGG | + | chr1.2:73235322-73235341 | None:intergenic | 55.0% |
!! | AGAAGGCGCCAAGGAGAATC+AGG | + | chr1.2:73236215-73236234 | None:intergenic | 55.0% |
!! | CCTTTGTTTGGTGGTGGTGG+TGG | - | chr1.2:73235879-73235898 | MS.gene54801:intron | 55.0% |
!! | GTTACCTGAAGAAGGCGCCA+AGG | + | chr1.2:73236224-73236243 | None:intergenic | 55.0% |
!! | TTTGGTGGTGGTGGTGGTTC+TGG | - | chr1.2:73235885-73235904 | MS.gene54801:intron | 55.0% |
! | GCACGCATGTGCTGGTGCCA+TGG | - | chr1.2:73235215-73235234 | MS.gene54801:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 73235153 | 73237661 | 73235153 | ID=MS.gene54801 |
chr1.2 | mRNA | 73235153 | 73237661 | 73235153 | ID=MS.gene54801.t1;Parent=MS.gene54801 |
chr1.2 | exon | 73236576 | 73237661 | 73236576 | ID=MS.gene54801.t1.exon1;Parent=MS.gene54801.t1 |
chr1.2 | CDS | 73236576 | 73237661 | 73236576 | ID=cds.MS.gene54801.t1;Parent=MS.gene54801.t1 |
chr1.2 | exon | 73235889 | 73235941 | 73235889 | ID=MS.gene54801.t1.exon2;Parent=MS.gene54801.t1 |
chr1.2 | CDS | 73235889 | 73235941 | 73235889 | ID=cds.MS.gene54801.t1;Parent=MS.gene54801.t1 |
chr1.2 | exon | 73235153 | 73235333 | 73235153 | ID=MS.gene54801.t1.exon3;Parent=MS.gene54801.t1 |
chr1.2 | CDS | 73235153 | 73235333 | 73235153 | ID=cds.MS.gene54801.t1;Parent=MS.gene54801.t1 |
Gene Sequence |
Protein sequence |