AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55230.t1 MTR_5g040880 89.924 526 51 2 1 526 1 524 0.0 958
MS.gene55230.t1 MTR_2g024430 59.693 521 190 8 1 516 9 514 0.0 577
MS.gene55230.t1 MTR_5g082140 53.398 515 177 7 1 510 1 457 3.65e-175 501
MS.gene55230.t1 MTR_5g040740 77.287 317 66 3 1 313 1 315 2.95e-174 497
MS.gene55230.t1 MTR_5g040740 60.000 55 21 1 464 517 352 406 8.02e-11 64.3
MS.gene55230.t1 MTR_5g061220 49.548 553 212 10 1 518 8 528 1.34e-162 472
MS.gene55230.t1 MTR_2g006270 46.552 522 196 12 1 513 1 448 2.02e-131 390
MS.gene55230.t1 MTR_3g073420 40.592 574 267 13 2 521 9 562 1.93e-122 372
MS.gene55230.t1 MTR_2g006380 41.245 514 217 14 6 513 14 448 1.28e-113 344
MS.gene55230.t1 MTR_1g058210 50.824 364 164 8 1 354 1 359 6.60e-112 340
MS.gene55230.t1 MTR_1g058210 48.718 78 40 0 426 503 359 436 6.11e-13 71.2
MS.gene55230.t1 MTR_5g060630 41.165 515 229 13 1 448 1 508 3.14e-106 328
MS.gene55230.t1 MTR_5g460740 41.165 515 229 13 1 448 1 508 3.14e-106 328
MS.gene55230.t1 MTR_5g060780 49.138 348 148 9 1 332 1 335 5.27e-102 313
MS.gene55230.t1 MTR_5g460920 49.138 348 148 9 1 332 1 335 3.22e-101 310
MS.gene55230.t1 MTR_5g061890 49.425 348 147 9 1 332 1 335 8.13e-101 310
MS.gene55230.t1 MTR_2g094570 35.348 546 265 15 9 494 8 525 1.89e-89 288
MS.gene55230.t1 MTR_2g094570 35.348 546 265 15 9 494 8 525 3.49e-89 288
MS.gene55230.t1 MTR_2g094570 35.294 544 268 14 9 494 64 581 1.40e-88 288
MS.gene55230.t1 MTR_4g058930 36.590 481 210 12 1 415 1 452 1.60e-86 281
MS.gene55230.t1 MTR_4g058930 36.590 481 210 12 1 415 1 452 2.53e-86 281
MS.gene55230.t1 MTR_1g064430 38.861 404 183 7 9 353 24 422 5.42e-83 272
MS.gene55230.t1 MTR_1g064430 38.861 404 183 7 9 353 37 435 7.34e-83 272
MS.gene55230.t1 MTR_1g094960 38.832 394 184 7 9 351 16 403 1.20e-80 264
MS.gene55230.t1 MTR_7g101280 32.920 565 264 18 9 495 28 555 2.07e-74 248
MS.gene55230.t1 MTR_0041s0110 32.920 565 264 18 9 495 28 555 2.07e-74 248
MS.gene55230.t1 MTR_5g062970 53.093 194 87 2 12 204 38 228 9.99e-65 211
MS.gene55230.t1 MTR_7g101275 38.608 316 163 9 22 317 2 306 1.09e-63 213
MS.gene55230.t1 MTR_4g021580 34.211 380 205 8 12 359 19 385 6.99e-61 211
MS.gene55230.t1 MTR_4g021580 34.211 380 205 8 12 359 19 385 1.44e-60 211
MS.gene55230.t1 MTR_2g014770 35.362 345 189 8 12 332 53 387 7.75e-60 208
MS.gene55230.t1 MTR_4g088210 35.447 347 190 8 12 332 38 376 9.26e-60 210
MS.gene55230.t1 MTR_4g088210 35.447 347 190 8 12 332 38 376 1.25e-59 209
MS.gene55230.t1 MTR_2g014770 35.362 345 189 8 12 332 53 387 1.59e-59 209
MS.gene55230.t1 MTR_2g005240 35.635 362 202 9 12 353 23 373 7.06e-58 204
MS.gene55230.t1 MTR_7g062540 35.608 337 199 7 12 334 14 346 9.97e-58 204
MS.gene55230.t1 MTR_8g027440 35.484 372 205 11 12 360 29 388 2.21e-57 203
MS.gene55230.t1 MTR_2g093740 35.150 367 206 13 12 352 56 416 1.25e-56 201
MS.gene55230.t1 MTR_0041s0120 36.280 328 166 9 22 317 2 318 2.41e-56 194
MS.gene55230.t1 MTR_2g093740 35.150 367 206 13 12 352 56 416 2.79e-56 201
MS.gene55230.t1 MTR_2g093740 35.150 367 206 13 12 352 56 416 5.67e-56 201
MS.gene55230.t1 MTR_2g018690 33.592 387 216 12 9 368 20 392 1.42e-55 201
MS.gene55230.t1 MTR_8g100050 34.160 363 211 8 12 354 59 413 1.70e-55 198
MS.gene55230.t1 MTR_8g079492 33.598 378 227 10 9 368 20 391 3.97e-55 199
MS.gene55230.t1 MTR_8g100050 34.160 363 211 8 12 354 59 413 9.13e-55 197
MS.gene55230.t1 MTR_8g079492 34.072 361 214 10 9 351 20 374 2.59e-54 197
MS.gene55230.t1 MTR_2g043250 33.613 357 199 7 9 340 20 363 4.28e-54 197
MS.gene55230.t1 MTR_1g024025 34.637 358 206 10 12 349 43 392 4.51e-54 197
MS.gene55230.t1 MTR_5g076270 32.546 381 220 11 12 367 24 392 7.60e-54 195
MS.gene55230.t1 MTR_4g124900 33.705 359 200 7 9 342 20 365 2.31e-53 195
MS.gene55230.t1 MTR_4g124900 33.705 359 200 7 9 342 20 365 2.62e-53 195
MS.gene55230.t1 MTR_2g093740 33.947 380 206 14 12 352 56 429 4.36e-53 191
MS.gene55230.t1 MTR_2g093740 33.947 380 206 14 12 352 56 429 1.25e-52 191
MS.gene55230.t1 MTR_2g093740 33.947 380 206 14 12 352 56 429 1.81e-52 191
MS.gene55230.t1 MTR_3g064050 31.701 388 214 11 12 367 26 394 4.90e-52 190
MS.gene55230.t1 MTR_8g101360 34.648 355 190 10 9 335 28 368 5.21e-52 191
MS.gene55230.t1 MTR_4g060460 34.066 364 210 10 12 349 54 413 6.95e-51 186
MS.gene55230.t1 MTR_4g060460 34.066 364 210 10 12 349 54 413 7.89e-51 186
MS.gene55230.t1 MTR_8g079492 34.505 313 183 9 72 368 3 309 4.64e-44 167
MS.gene55230.t1 MTR_5g060770 34.530 362 174 12 63 417 9 314 3.15e-43 157
MS.gene55230.t1 MTR_2g093740 36.471 255 140 9 114 352 38 286 7.59e-41 156
MS.gene55230.t1 MTR_2g093740 36.471 255 140 9 114 352 38 286 1.03e-40 156
MS.gene55230.t1 MTR_2g093740 34.701 268 140 10 114 352 38 299 1.45e-37 147
MS.gene55230.t1 MTR_2g093740 34.701 268 140 10 114 352 38 299 1.76e-37 147
MS.gene55230.t1 MTR_5g062960 41.860 215 84 8 231 439 2 181 1.49e-34 129
MS.gene55230.t1 MTR_8g446900 28.276 290 183 8 61 335 12 291 7.60e-33 129
MS.gene55230.t1 MTR_5g460910 29.600 375 178 13 51 417 13 309 1.62e-25 107
MS.gene55230.t1 MTR_5g046120 42.400 125 64 4 42 162 3 123 7.13e-21 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55230.t1 AT1G77850 36.449 535 272 11 9 494 16 531 1.08e-105 328
MS.gene55230.t1 AT1G77850 36.449 535 272 11 9 494 16 531 1.98e-105 328
MS.gene55230.t1 AT2G28350 39.651 401 178 8 9 351 7 401 3.25e-85 277
MS.gene55230.t1 AT2G28350 39.651 401 178 8 9 351 7 401 4.80e-85 277
MS.gene55230.t1 AT4G30080 36.564 454 218 9 9 411 16 450 9.05e-85 276
MS.gene55230.t1 AT4G23980 37.982 337 187 8 12 332 12 342 7.70e-64 219
MS.gene55230.t1 AT4G23980 37.982 337 187 8 12 332 12 342 8.23e-64 219
MS.gene55230.t1 AT2G33860 36.261 353 185 9 12 337 54 393 5.89e-63 216
MS.gene55230.t1 AT2G46530 35.813 363 201 11 12 355 21 370 3.22e-58 204
MS.gene55230.t1 AT2G46530 35.813 363 201 11 12 355 42 391 6.89e-58 203
MS.gene55230.t1 AT3G61830 35.000 360 208 11 12 353 25 376 9.04e-58 202
MS.gene55230.t1 AT5G37020 32.718 379 220 10 12 366 22 389 3.41e-57 204
MS.gene55230.t1 AT5G37020 32.718 379 220 10 12 366 22 389 4.44e-57 204
MS.gene55230.t1 AT1G35520 36.389 360 203 9 12 355 27 376 1.03e-56 199
MS.gene55230.t1 AT1G59750 34.349 361 208 8 12 352 22 373 1.12e-56 201
MS.gene55230.t1 AT1G59750 34.349 361 208 8 12 352 22 373 1.20e-56 201
MS.gene55230.t1 AT1G59750 34.349 361 208 8 12 352 22 373 1.20e-56 201
MS.gene55230.t1 AT1G59750 34.349 361 208 8 12 352 22 373 1.41e-56 200
MS.gene55230.t1 AT5G60450 36.164 365 209 9 7 349 36 398 1.68e-56 202
MS.gene55230.t1 AT5G60450 36.389 360 205 9 12 349 65 422 3.39e-56 201
MS.gene55230.t1 AT1G19850 34.659 352 207 9 9 342 40 386 9.91e-56 201
MS.gene55230.t1 AT1G19850 34.659 352 207 9 9 342 51 397 1.04e-55 201
MS.gene55230.t1 AT1G34410 36.095 338 191 7 12 334 27 354 7.76e-55 194
MS.gene55230.t1 AT1G35240 36.310 336 189 7 12 332 27 352 4.00e-54 192
MS.gene55230.t1 AT5G62000 33.973 365 209 10 12 354 61 415 7.28e-54 195
MS.gene55230.t1 AT1G35540 35.588 340 192 8 12 335 27 355 7.65e-54 192
MS.gene55230.t1 AT5G62000 33.973 365 209 10 12 354 61 415 7.81e-54 195
MS.gene55230.t1 AT5G62000 33.973 365 209 10 12 354 61 415 7.81e-54 195
MS.gene55230.t1 AT5G62000 33.973 365 209 10 12 354 61 415 7.81e-54 195
MS.gene55230.t1 AT5G62000 33.973 365 209 10 12 354 61 415 7.81e-54 195
MS.gene55230.t1 AT1G34390 34.699 366 211 10 12 361 27 380 2.66e-53 190
MS.gene55230.t1 AT1G34310 36.628 344 191 9 7 334 22 354 2.98e-53 190
MS.gene55230.t1 AT1G30330 33.705 359 213 10 12 351 23 375 4.68e-53 194
MS.gene55230.t1 AT1G30330 33.705 359 213 10 12 351 25 377 4.81e-53 194
MS.gene55230.t1 AT1G30330 33.705 359 213 10 12 351 25 377 4.81e-53 194
MS.gene55230.t1 AT1G19220 33.427 356 205 8 9 342 20 365 1.33e-51 190
MS.gene55230.t1 AT5G20730 31.989 372 190 7 9 342 21 367 3.31e-50 186
MS.gene55230.t1 AT5G20730 31.989 372 190 7 9 342 21 367 3.54e-50 186
MS.gene55230.t1 AT5G20730 32.258 372 188 8 9 342 21 366 1.06e-49 184
MS.gene55230.t1 AT2G33860 39.076 238 128 4 114 337 2 236 4.30e-49 176
MS.gene55230.t1 AT3G61830 34.951 309 180 8 59 353 24 325 2.48e-46 170
MS.gene55230.t1 AT1G34170 31.105 344 202 9 12 334 25 354 3.93e-46 169
MS.gene55230.t1 AT5G37020 34.328 268 157 7 114 366 31 294 2.03e-42 161
MS.gene55230.t1 AT2G46530 37.209 258 141 8 111 355 34 283 5.15e-40 152
MS.gene55230.t1 AT1G34170 29.942 344 180 10 12 334 25 328 9.33e-39 148
MS.gene55230.t1 AT1G34170 29.942 344 180 10 12 334 25 328 2.34e-38 148
MS.gene55230.t1 AT1G43950 37.561 205 116 4 12 213 27 222 7.88e-34 128
MS.gene55230.t1 AT4G01500 29.452 146 96 3 108 251 30 170 4.21e-11 64.7

Find 129 sgRNAs with CRISPR-Local

Find 171 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATGTTTAAACTCTATATT+TGG 0.091140 5.2:+30678462 None:intergenic
CCCGGTTCATTTATGCTATT+TGG 0.108058 5.2:-30678150 MS.gene55230:CDS
TCTCAATATCATAGGTTAAA+TGG 0.119810 5.2:-30678680 MS.gene55230:intron
GCACAGCACTGCCAGATTTC+TGG 0.173902 5.2:+30680178 None:intergenic
TGCTGCATTCAGTGATAAAA+AGG 0.230634 5.2:-30678529 MS.gene55230:CDS
CATGTTTACTATTTCCCATT+AGG 0.248438 5.2:-30680121 MS.gene55230:CDS
CAATCTTGGTCCTATATCTT+TGG 0.252865 5.2:-30678259 MS.gene55230:CDS
GGGAGAGTGTGTTAAGGTTT+GGG 0.292467 5.2:+30680074 None:intergenic
ATGTTTACTATTTCCCATTA+GGG 0.298210 5.2:-30680120 MS.gene55230:CDS
GTGATATTCACGGCAAAGTT+TGG 0.308610 5.2:-30679739 MS.gene55230:CDS
ATGTGTTCTAAGTGCCCTAA+TGG 0.313804 5.2:+30680106 None:intergenic
TAAACATGAGAATATAGTTT+TGG 0.323933 5.2:+30680136 None:intergenic
TTTGATGCCTTCAATTTCAT+TGG 0.329868 5.2:+30678056 None:intergenic
TGAACCGGGACTAACTTTCT+TGG 0.329918 5.2:+30678164 None:intergenic
GATAAAAGCAATGGTTTCCT+TGG 0.335382 5.2:-30678327 MS.gene55230:CDS
TCTGGAACGTGCGAGACTTT+AGG 0.336417 5.2:+30678651 None:intergenic
TGAGTCTTTCATGAAAATTA+AGG 0.342069 5.2:+30679619 None:intergenic
GATATAGGACCAAGATTGTT+TGG 0.344613 5.2:+30678264 None:intergenic
GATTTCTGGCTCAACACGGC+TGG 0.344702 5.2:+30680192 None:intergenic
AGGGAGAGTGTGTTAAGGTT+TGG 0.348408 5.2:+30680073 None:intergenic
ATTGTTCAACAATGTTTGAT+TGG 0.354882 5.2:+30678425 None:intergenic
GTTTACGGAGGCATTGGAAT+TGG 0.359403 5.2:-30679525 MS.gene55230:CDS
ACCAAATAGCATAAATGAAC+CGG 0.359465 5.2:+30678149 None:intergenic
ATGAATATTAAGTGGAATCT+TGG 0.367936 5.2:-30679410 MS.gene55230:CDS
CTCAATATCATAGGTTAAAT+GGG 0.383997 5.2:-30678679 MS.gene55230:intron
GCCGTGTTGAGCCAGAAATC+TGG 0.395763 5.2:-30680189 MS.gene55230:CDS
GAAATCTGGCAGTGCTGTGC+AGG 0.404779 5.2:-30680175 MS.gene55230:CDS
AATGTTTAAACTCTATATTT+GGG 0.405482 5.2:+30678463 None:intergenic
AAAGAGATGCTCAAAATTTG+AGG 0.405775 5.2:-30679348 MS.gene55230:CDS
GTTCGCCGACAGACAAAGTT+TGG 0.410958 5.2:-30679575 MS.gene55230:CDS
AGCATCCGCCATGGACGATT+AGG 0.415227 5.2:+30679302 None:intergenic
CATTGCATCCTCCACAACTT+TGG 0.422061 5.2:+30679430 None:intergenic
TTCCAGAGAGAGTCAGTCCT+TGG 0.427770 5.2:-30678635 MS.gene55230:CDS
TCTTGAAAATCGCTTCCAAC+AGG 0.432199 5.2:+30678114 None:intergenic
TCCCAAGGACTGACTCTCTC+TGG 0.440968 5.2:+30678633 None:intergenic
AGACCAAGATGATGACAAAA+AGG 0.442333 5.2:-30679900 MS.gene55230:CDS
GTGTATTATCCGACGGCTAA+AGG 0.444783 5.2:-30679476 MS.gene55230:CDS
ATTAATTTCGCGCATTCCAC+TGG 0.445870 5.2:+30679815 None:intergenic
TCTCTTGTGACAAAGTTTGC+CGG 0.446910 5.2:-30678204 MS.gene55230:CDS
GCTCTTCTTGATTGCATGCA+GGG 0.464239 5.2:-30678399 MS.gene55230:CDS
GACATCTGCTTACCACTGAT+TGG 0.464434 5.2:-30679682 MS.gene55230:CDS
TGTGTTCTAAGTGCCCTAAT+GGG 0.466149 5.2:+30680107 None:intergenic
ATAAAAGCAATGGTTTCCTT+GGG 0.470549 5.2:-30678326 MS.gene55230:CDS
TCAAGTGAGCCAAACAATCT+TGG 0.472055 5.2:-30678273 MS.gene55230:CDS
GGTGACAAGTCCAAAGATAT+AGG 0.472899 5.2:+30678249 None:intergenic
TGCTCTTCTTGATTGCATGC+AGG 0.478114 5.2:-30678400 MS.gene55230:CDS
AAAATCGTTTACGGAGGCAT+TGG 0.479022 5.2:-30679531 MS.gene55230:CDS
TCCAGAGAGAGTCAGTCCTT+GGG 0.479886 5.2:-30678634 MS.gene55230:CDS
AAAGCTTAGAAAATCTGATC+AGG 0.481737 5.2:-30678556 MS.gene55230:CDS
TGGGGTGAGAGTCTTGGTAT+AGG 0.489342 5.2:+30679871 None:intergenic
CTCCTTCGTCCCAAATATAG+AGG 0.491263 5.2:-30678502 MS.gene55230:CDS
TTGATTGCATGCAGGGAGCC+CGG 0.491918 5.2:-30678392 MS.gene55230:CDS
GAGACGGTGCAGAGAATGAA+TGG 0.493422 5.2:+30680034 None:intergenic
TCTTGGTCTTCACGAACCTC+AGG 0.497877 5.2:+30679914 None:intergenic
ATTTCTGGCTCAACACGGCT+GGG 0.498855 5.2:+30680193 None:intergenic
CTCACTCCTGTCACTAATAA+CGG 0.499710 5.2:-30679956 MS.gene55230:CDS
TACGGAGGCATTGGAATTGG+CGG 0.504623 5.2:-30679522 MS.gene55230:CDS
CAAGAGAGTTAGAAATATCA+TGG 0.505101 5.2:+30678220 None:intergenic
CCGCCATTGTTAGCATCAGA+TGG 0.508974 5.2:+30679851 None:intergenic
TCACGAACCTCAGGAGATTG+AGG 0.509135 5.2:+30679923 None:intergenic
CGCCATTGTTAGCATCAGAT+GGG 0.516466 5.2:+30679852 None:intergenic
AAAGGCTCCAATGAAATTGA+AGG 0.522242 5.2:-30678063 MS.gene55230:CDS
TGAACACCGTTATTAGTGAC+AGG 0.525054 5.2:+30679950 None:intergenic
GGTAAGATCATAAAACCTGT+TGG 0.525681 5.2:-30678129 MS.gene55230:CDS
CAAGAAGGGAGAGTGTGTTA+AGG 0.527767 5.2:+30680068 None:intergenic
TTTATGAATGATAAAAGCAA+TGG 0.529057 5.2:-30678336 MS.gene55230:CDS
CTCTCCATCAGTGATATTCA+CGG 0.529787 5.2:-30679749 MS.gene55230:CDS
GGTGTTGCTGTTGTCAGTAC+CGG 0.533496 5.2:+30678185 None:intergenic
AATATTAAGTGGAATCTTGG+AGG 0.534264 5.2:-30679407 MS.gene55230:CDS
ATCAGATGGGGTGAGAGTCT+TGG 0.534822 5.2:+30679865 None:intergenic
AAGAGATGCTCAAAATTTGA+GGG 0.539733 5.2:-30679347 MS.gene55230:CDS
ATGGGAAATGATGATTGTAA+AGG 0.540341 5.2:-30678081 MS.gene55230:CDS
GTTCAACAATGTTTGATTGG+AGG 0.545186 5.2:+30678428 None:intergenic
TCGTCCATGGCGGATGCTTG+AGG 0.546119 5.2:-30679297 MS.gene55230:intron
TGGATACAGTGCAAATATGT+CGG 0.548922 5.2:+30678596 None:intergenic
AGGATGCAATGAATATTAAG+TGG 0.550257 5.2:-30679418 MS.gene55230:CDS
CAGTATTGAGGTCAAGTGGC+GGG 0.551417 5.2:+30679789 None:intergenic
GGAGAGTGTGTTAAGGTTTG+GGG 0.553968 5.2:+30680075 None:intergenic
GTTGACAAGAAGAAACTAGT+TGG 0.559606 5.2:-30679650 MS.gene55230:CDS
TTTCCTTGGGAACAATTCTA+CGG 0.560425 5.2:-30678313 MS.gene55230:CDS
GAGTAAATCAACCGCGGAGA+CGG 0.561625 5.2:+30680018 None:intergenic
TTTCAAGAAGTAGATATCAT+GGG 0.561761 5.2:-30678099 MS.gene55230:CDS
CGGTGCAGAGAATGAATGGA+CGG 0.572030 5.2:+30680038 None:intergenic
CGGTGCATTCTCCGTGCCAG+TGG 0.572523 5.2:-30679831 MS.gene55230:CDS
AGTGGTAAGCAGATGTCGCA+AGG 0.572865 5.2:+30679688 None:intergenic
ATGGACGGGAACGGTCAAGA+AGG 0.574895 5.2:+30680053 None:intergenic
AGCCTCTATATTTGGGACGA+AGG 0.575856 5.2:+30678500 None:intergenic
AGTGTGTTAAGGTTTGGGGA+TGG 0.576894 5.2:+30680079 None:intergenic
TGAAGTTGTGTATTATCCGA+CGG 0.581151 5.2:-30679483 MS.gene55230:CDS
TATCTGCTCCTAATCGTCCA+TGG 0.582308 5.2:-30679310 MS.gene55230:CDS
AAAGTTGGAAGAAGTTGATG+TGG 0.582671 5.2:+30678356 None:intergenic
AGGGAGTCCCACGGTAGACA+TGG 0.583730 5.2:+30679708 None:intergenic
TAGTTTGACGAAGACTTCAT+CGG 0.587512 5.2:+30679982 None:intergenic
TGTTGTTGATGCCAAAGTTG+TGG 0.589052 5.2:-30679441 MS.gene55230:CDS
GGAATTGGCGGATAAGAACA+TGG 0.591988 5.2:-30679510 MS.gene55230:CDS
TTAGAAATATCATGGCTATG+AGG 0.592683 5.2:+30678228 None:intergenic
TGGACGGGAACGGTCAAGAA+GGG 0.593041 5.2:+30680054 None:intergenic
CCAAATAGCATAAATGAACC+GGG 0.595203 5.2:+30678150 None:intergenic
CAGCACCAAACTTTGTCTGT+CGG 0.605931 5.2:+30679570 None:intergenic
GAAATAGTTTCAACCTCCCA+AGG 0.609478 5.2:+30678618 None:intergenic
TTTGCCGTGAATATCACTGA+TGG 0.609703 5.2:+30679745 None:intergenic
AACACCAAGAAAGTTAGTCC+CGG 0.610950 5.2:-30678168 MS.gene55230:CDS
AGAGAGAGTCAGTCCTTGGG+AGG 0.615146 5.2:-30678631 MS.gene55230:CDS
ATATTAAGTGGAATCTTGGA+GGG 0.616357 5.2:-30679406 MS.gene55230:CDS
AGAGAATGAATGGACGGGAA+CGG 0.620696 5.2:+30680044 None:intergenic
GGTGCAGAGAATGAATGGAC+GGG 0.621986 5.2:+30680039 None:intergenic
ATTATCCGACGGCTAAAGGT+TGG 0.622172 5.2:-30679472 MS.gene55230:CDS
TCAGACGGAAATATCTCAGT+CGG 0.627485 5.2:-30679599 MS.gene55230:CDS
GACAAGAAGAAACTAGTTGG+CGG 0.628517 5.2:-30679647 MS.gene55230:CDS
TTACACCAACCTTTAGCCGT+CGG 0.633265 5.2:+30679467 None:intergenic
TATACCTCAAGCATCCGCCA+TGG 0.633522 5.2:+30679293 None:intergenic
GTGCCGTAGAATTGTTCCCA+AGG 0.635548 5.2:+30678310 None:intergenic
TGTTGATGCCAAAGTTGTGG+AGG 0.640943 5.2:-30679438 MS.gene55230:CDS
AACGAACTCACTCCAATCAG+TGG 0.642790 5.2:+30679670 None:intergenic
CGTTATTAGTGACAGGAGTG+AGG 0.644895 5.2:+30679957 None:intergenic
GCTGGGTTTCTGAGAAGACA+TGG 0.647425 5.2:+30680210 None:intergenic
TTTCGCGCATTCCACTGGCA+CGG 0.656401 5.2:+30679820 None:intergenic
ACCCCATCTGATGCTAACAA+TGG 0.658035 5.2:-30679854 MS.gene55230:CDS
CATTCTCTGCACCGTCTCCG+CGG 0.665712 5.2:-30680029 MS.gene55230:CDS
CTGATGGAGAGTTCTTGAGA+CGG 0.666946 5.2:+30679761 None:intergenic
GTGGTAAGCAGATGTCGCAA+GGG 0.667574 5.2:+30679689 None:intergenic
TCACGAACCTCAATCTCCTG+AGG 0.668607 5.2:-30679930 MS.gene55230:CDS
GCCATTGTTAGCATCAGATG+GGG 0.683328 5.2:+30679853 None:intergenic
GCCAGATTTCTGGCTCAACA+CGG 0.683376 5.2:+30680188 None:intergenic
TCAGTATTGAGGTCAAGTGG+CGG 0.689021 5.2:+30679788 None:intergenic
CCATCTGATGCTAACAATGG+CGG 0.690560 5.2:-30679851 MS.gene55230:CDS
GATGTCGCAAGGGAGTCCCA+CGG 0.699974 5.2:+30679699 None:intergenic
CTGCTCCTAATCGTCCATGG+CGG 0.723801 5.2:-30679307 MS.gene55230:CDS
GTCAGCGAGTAAATCAACCG+CGG 0.752817 5.2:+30680012 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCATTTAAAATATATGATA+AGG + chr5.2:30679524-30679543 None:intergenic 10.0%
!!! TATCATATATTTTAAATGAT+TGG - chr5.2:30679524-30679543 MS.gene55230:CDS 10.0%
!!! TTAATTAACTTTCTTTTTTA+GGG - chr5.2:30679149-30679168 MS.gene55230:intron 10.0%
!!! TTTAATTAACTTTCTTTTTT+AGG - chr5.2:30679148-30679167 MS.gene55230:intron 10.0%
!! AAAAAGAAAGTTAATTAAAC+AGG + chr5.2:30679147-30679166 None:intergenic 15.0%
!! AAATGTTTAAACTCTATATT+TGG + chr5.2:30679790-30679809 None:intergenic 15.0%
!! AATGTTTAAACTCTATATTT+GGG + chr5.2:30679789-30679808 None:intergenic 15.0%
!!! TATTTTTATCTCAATATCAT+AGG - chr5.2:30679561-30679580 MS.gene55230:CDS 15.0%
!! AAACTTAAATACCATTTCTT+AGG + chr5.2:30679420-30679439 None:intergenic 20.0%
!! AAATACTCTTAATGTTAAGT+AGG - chr5.2:30679467-30679486 MS.gene55230:CDS 20.0%
!! ATTCTTTATGAAGTTGAAAT+AGG - chr5.2:30679250-30679269 MS.gene55230:intron 20.0%
!! TATTTCAACTTCATAAAGAA+TGG + chr5.2:30679251-30679270 None:intergenic 20.0%
!! TTGTACAGTATACTTTATAT+AGG - chr5.2:30679308-30679327 MS.gene55230:CDS 20.0%
!! TTTATGAATGATAAAAGCAA+TGG - chr5.2:30679913-30679932 MS.gene55230:CDS 20.0%
!!! ACATTAAGAGTATTTACAAT+AGG + chr5.2:30679462-30679481 None:intergenic 20.0%
!!! TAAACATGAGAATATAGTTT+TGG + chr5.2:30678116-30678135 None:intergenic 20.0%
! AGTCATTGCAGTTAATTTAA+TGG + chr5.2:30679205-30679224 None:intergenic 25.0%
! ATGAATATTAAGTGGAATCT+TGG - chr5.2:30678839-30678858 MS.gene55230:intron 25.0%
! ATGTTTACTATTTCCCATTA+GGG - chr5.2:30678129-30678148 MS.gene55230:CDS 25.0%
! ATTGTTCAACAATGTTTGAT+TGG + chr5.2:30679827-30679846 None:intergenic 25.0%
! CTCAATATCATAGGTTAAAT+GGG - chr5.2:30679570-30679589 MS.gene55230:CDS 25.0%
! GATAACAGAAAAATCGTTTA+CGG - chr5.2:30678709-30678728 MS.gene55230:intron 25.0%
! TAGTGATATTTCCTAAGAAA+TGG - chr5.2:30679406-30679425 MS.gene55230:CDS 25.0%
! TCAAAAAAGCCTCTATATTT+GGG + chr5.2:30679759-30679778 None:intergenic 25.0%
! TCTCAATATCATAGGTTAAA+TGG - chr5.2:30679569-30679588 MS.gene55230:CDS 25.0%
! TGAGTCTTTCATGAAAATTA+AGG + chr5.2:30678633-30678652 None:intergenic 25.0%
! TTCAAAAAAGCCTCTATATT+TGG + chr5.2:30679760-30679779 None:intergenic 25.0%
! TTCTTAGGAAATATCACTAT+TGG + chr5.2:30679405-30679424 None:intergenic 25.0%
! TTTCAAGAAGTAGATATCAT+GGG - chr5.2:30680150-30680169 MS.gene55230:CDS 25.0%
!! GCTTTTATCATTCATAAAGT+TGG + chr5.2:30679911-30679930 None:intergenic 25.0%
!!! GATTTTCTAAGCTTTTTTGT+CGG + chr5.2:30679688-30679707 None:intergenic 25.0%
!!! TTTTCAAGAAGTAGATATCA+TGG - chr5.2:30680149-30680168 MS.gene55230:CDS 25.0%
AAAGAGATGCTCAAAATTTG+AGG - chr5.2:30678901-30678920 MS.gene55230:intron 30.0%
AAAGCTTAGAAAATCTGATC+AGG - chr5.2:30679693-30679712 MS.gene55230:CDS 30.0%
AAGAGATGCTCAAAATTTGA+GGG - chr5.2:30678902-30678921 MS.gene55230:intron 30.0%
AAGATAAACCGTAACTTACT+TGG + chr5.2:30679070-30679089 None:intergenic 30.0%
AATATTAAGTGGAATCTTGG+AGG - chr5.2:30678842-30678861 MS.gene55230:intron 30.0%
ACCAAATAGCATAAATGAAC+CGG + chr5.2:30680103-30680122 None:intergenic 30.0%
ACTTGGTCTCATAATTAACT+AGG + chr5.2:30679053-30679072 None:intergenic 30.0%
AGGATGCAATGAATATTAAG+TGG - chr5.2:30678831-30678850 MS.gene55230:intron 30.0%
ATAAAAGCAATGGTTTCCTT+GGG - chr5.2:30679923-30679942 MS.gene55230:CDS 30.0%
ATATTAAGTGGAATCTTGGA+GGG - chr5.2:30678843-30678862 MS.gene55230:intron 30.0%
ATGGGAAATGATGATTGTAA+AGG - chr5.2:30680168-30680187 MS.gene55230:CDS 30.0%
CAAGAGAGTTAGAAATATCA+TGG + chr5.2:30680032-30680051 None:intergenic 30.0%
CATAAACTGAGACAACTTAT+TGG + chr5.2:30679281-30679300 None:intergenic 30.0%
CATGTTTACTATTTCCCATT+AGG - chr5.2:30678128-30678147 MS.gene55230:CDS 30.0%
CTTAATGTTAAGTAGGATCT+TGG - chr5.2:30679474-30679493 MS.gene55230:CDS 30.0%
CTTGGTCTCATAATTAACTA+GGG + chr5.2:30679052-30679071 None:intergenic 30.0%
TTAGAAATATCATGGCTATG+AGG + chr5.2:30680024-30680043 None:intergenic 30.0%
TTATGAGACCAAGTAAGTTA+CGG - chr5.2:30679059-30679078 MS.gene55230:intron 30.0%
TTTGATGCCTTCAATTTCAT+TGG + chr5.2:30680196-30680215 None:intergenic 30.0%
! ATTTTCATGAAAGACTCAGA+CGG - chr5.2:30678635-30678654 MS.gene55230:CDS 30.0%
!! AAGTTGATGTGGAAAAAAGA+CGG + chr5.2:30679885-30679904 None:intergenic 30.0%
!!! TATAGAGGCTTTTTTGAAGA+TGG - chr5.2:30679762-30679781 MS.gene55230:CDS 30.0%
AAAGGCTCCAATGAAATTGA+AGG - chr5.2:30680186-30680205 MS.gene55230:CDS 35.0%
AACAGAAAAATCGTTTACGG+AGG - chr5.2:30678712-30678731 MS.gene55230:intron 35.0%
AACTGAGACAACTTATTGGA+CGG + chr5.2:30679277-30679296 None:intergenic 35.0%
AGACCAAGATGATGACAAAA+AGG - chr5.2:30678349-30678368 MS.gene55230:CDS 35.0%
CAATCTTGGTCCTATATCTT+TGG - chr5.2:30679990-30680009 MS.gene55230:CDS 35.0%
CCAAATAGCATAAATGAACC+GGG + chr5.2:30680102-30680121 None:intergenic 35.0%
GATAAAAGCAATGGTTTCCT+TGG - chr5.2:30679922-30679941 MS.gene55230:CDS 35.0%
GATATAGGACCAAGATTGTT+TGG + chr5.2:30679988-30680007 None:intergenic 35.0%
GCTGCATTCAGTGATAAAAA+GGG - chr5.2:30679721-30679740 MS.gene55230:CDS 35.0%
GGTAAGATCATAAAACCTGT+TGG - chr5.2:30680120-30680139 MS.gene55230:CDS 35.0%
GTTCAACAATGTTTGATTGG+AGG + chr5.2:30679824-30679843 None:intergenic 35.0%
GTTGACAAGAAGAAACTAGT+TGG - chr5.2:30678599-30678618 MS.gene55230:CDS 35.0%
TAGTTTGACGAAGACTTCAT+CGG + chr5.2:30678270-30678289 None:intergenic 35.0%
TGAAGTTGTGTATTATCCGA+CGG - chr5.2:30678766-30678785 MS.gene55230:intron 35.0%
TGCTGCATTCAGTGATAAAA+AGG - chr5.2:30679720-30679739 MS.gene55230:CDS 35.0%
TGGATACAGTGCAAATATGT+CGG + chr5.2:30679656-30679675 None:intergenic 35.0%
TTTCCTTGGGAACAATTCTA+CGG - chr5.2:30679936-30679955 MS.gene55230:CDS 35.0%
! CAACCTTTTTGTCATCATCT+TGG + chr5.2:30678355-30678374 None:intergenic 35.0%
!! AAAGTTGGAAGAAGTTGATG+TGG + chr5.2:30679896-30679915 None:intergenic 35.0%
!! TTTTCAGTATTGAGGTCAAG+TGG + chr5.2:30678467-30678486 None:intergenic 35.0%
!!! TTCTAAGCTTTTTTGTCGGT+TGG + chr5.2:30679684-30679703 None:intergenic 35.0%
!!! TTTTTTGTCGGTTGGAATTG+TGG + chr5.2:30679676-30679695 None:intergenic 35.0%
AACACCAAGAAAGTTAGTCC+CGG - chr5.2:30680081-30680100 MS.gene55230:CDS 40.0%
ATTAATTTCGCGCATTCCAC+TGG + chr5.2:30678437-30678456 None:intergenic 40.0%
CCCGGTTCATTTATGCTATT+TGG - chr5.2:30680099-30680118 MS.gene55230:CDS 40.0%
CTCACTCCTGTCACTAATAA+CGG - chr5.2:30678293-30678312 MS.gene55230:CDS 40.0%
CTCTCCATCAGTGATATTCA+CGG - chr5.2:30678500-30678519 MS.gene55230:CDS 40.0%
GAAATAGTTTCAACCTCCCA+AGG + chr5.2:30679634-30679653 None:intergenic 40.0%
GACAAGAAGAAACTAGTTGG+CGG - chr5.2:30678602-30678621 MS.gene55230:CDS 40.0%
GGTGACAAGTCCAAAGATAT+AGG + chr5.2:30680003-30680022 None:intergenic 40.0%
GTGATATTCACGGCAAAGTT+TGG - chr5.2:30678510-30678529 MS.gene55230:CDS 40.0%
TCAAGTGAGCCAAACAATCT+TGG - chr5.2:30679976-30679995 MS.gene55230:CDS 40.0%
TCAGACGGAAATATCTCAGT+CGG - chr5.2:30678650-30678669 MS.gene55230:CDS 40.0%
TCTCTTGTGACAAAGTTTGC+CGG - chr5.2:30680045-30680064 MS.gene55230:CDS 40.0%
TCTTGAAAATCGCTTCCAAC+AGG + chr5.2:30680138-30680157 None:intergenic 40.0%
TGAACACCGTTATTAGTGAC+AGG + chr5.2:30678302-30678321 None:intergenic 40.0%
TGTTGTTGATGCCAAAGTTG+TGG - chr5.2:30678808-30678827 MS.gene55230:intron 40.0%
TTTGCCGTGAATATCACTGA+TGG + chr5.2:30678507-30678526 None:intergenic 40.0%
! AAAATCGTTTACGGAGGCAT+TGG - chr5.2:30678718-30678737 MS.gene55230:intron 40.0%
! ATGTGTTCTAAGTGCCCTAA+TGG + chr5.2:30678146-30678165 None:intergenic 40.0%
! TGTGTTCTAAGTGCCCTAAT+GGG + chr5.2:30678145-30678164 None:intergenic 40.0%
!! CACTATTGGAGCAAGTTGAT+AGG + chr5.2:30679391-30679410 None:intergenic 40.0%
AACGAACTCACTCCAATCAG+TGG + chr5.2:30678582-30678601 None:intergenic 45.0%
ACCCCATCTGATGCTAACAA+TGG - chr5.2:30678395-30678414 MS.gene55230:CDS 45.0%
AGAGAATGAATGGACGGGAA+CGG + chr5.2:30678208-30678227 None:intergenic 45.0%
AGTGTGTTAAGGTTTGGGGA+TGG + chr5.2:30678173-30678192 None:intergenic 45.0%
ATGTGGAAAAAAGACGGTGC+CGG + chr5.2:30679879-30679898 None:intergenic 45.0%
ATTATCCGACGGCTAAAGGT+TGG - chr5.2:30678777-30678796 MS.gene55230:intron 45.0%
CAGCACCAAACTTTGTCTGT+CGG + chr5.2:30678682-30678701 None:intergenic 45.0%
CATTGCATCCTCCACAACTT+TGG + chr5.2:30678822-30678841 None:intergenic 45.0%
CCATCTGATGCTAACAATGG+CGG - chr5.2:30678398-30678417 MS.gene55230:CDS 45.0%
CGCCATTGTTAGCATCAGAT+GGG + chr5.2:30678400-30678419 None:intergenic 45.0%
CGTTATTAGTGACAGGAGTG+AGG + chr5.2:30678295-30678314 None:intergenic 45.0%
CTCCTTCGTCCCAAATATAG+AGG - chr5.2:30679747-30679766 MS.gene55230:CDS 45.0%
CTGATGGAGAGTTCTTGAGA+CGG + chr5.2:30678491-30678510 None:intergenic 45.0%
GACATCTGCTTACCACTGAT+TGG - chr5.2:30678567-30678586 MS.gene55230:CDS 45.0%
GCCATTGTTAGCATCAGATG+GGG + chr5.2:30678399-30678418 None:intergenic 45.0%
GCTCTTCTTGATTGCATGCA+GGG - chr5.2:30679850-30679869 MS.gene55230:CDS 45.0%
GTGTATTATCCGACGGCTAA+AGG - chr5.2:30678773-30678792 MS.gene55230:intron 45.0%
TATCTGCTCCTAATCGTCCA+TGG - chr5.2:30678939-30678958 MS.gene55230:intron 45.0%
TGAACCGGGACTAACTTTCT+TGG + chr5.2:30680088-30680107 None:intergenic 45.0%
TGCTCTTCTTGATTGCATGC+AGG - chr5.2:30679849-30679868 MS.gene55230:CDS 45.0%
TGTTGATGCCAAAGTTGTGG+AGG - chr5.2:30678811-30678830 MS.gene55230:intron 45.0%
TTACACCAACCTTTAGCCGT+CGG + chr5.2:30678785-30678804 None:intergenic 45.0%
! AATTTTCGCCATGTCTACCG+TGG - chr5.2:30678533-30678552 MS.gene55230:CDS 45.0%
! AGCCTCTATATTTGGGACGA+AGG + chr5.2:30679752-30679771 None:intergenic 45.0%
! AGGGAGAGTGTGTTAAGGTT+TGG + chr5.2:30678179-30678198 None:intergenic 45.0%
! ATTTTCGCCATGTCTACCGT+GGG - chr5.2:30678534-30678553 MS.gene55230:CDS 45.0%
! CAAGAAGGGAGAGTGTGTTA+AGG + chr5.2:30678184-30678203 None:intergenic 45.0%
! GAGACGGCTTTTCAGTATTG+AGG + chr5.2:30678475-30678494 None:intergenic 45.0%
! GGAATTGGCGGATAAGAACA+TGG - chr5.2:30678739-30678758 MS.gene55230:intron 45.0%
! GGAGAGTGTGTTAAGGTTTG+GGG + chr5.2:30678177-30678196 None:intergenic 45.0%
! GGGAGAGTGTGTTAAGGTTT+GGG + chr5.2:30678178-30678197 None:intergenic 45.0%
! TCAGTATTGAGGTCAAGTGG+CGG + chr5.2:30678464-30678483 None:intergenic 45.0%
!! GTTTACGGAGGCATTGGAAT+TGG - chr5.2:30678724-30678743 MS.gene55230:intron 45.0%
AGTGGTAAGCAGATGTCGCA+AGG + chr5.2:30678564-30678583 None:intergenic 50.0%
ATCAGATGGGGTGAGAGTCT+TGG + chr5.2:30678387-30678406 None:intergenic 50.0%
CCGCCATTGTTAGCATCAGA+TGG + chr5.2:30678401-30678420 None:intergenic 50.0%
CGGTGCAGAGAATGAATGGA+CGG + chr5.2:30678214-30678233 None:intergenic 50.0%
GAGACGGTGCAGAGAATGAA+TGG + chr5.2:30678218-30678237 None:intergenic 50.0%
GAGTAAATCAACCGCGGAGA+CGG + chr5.2:30678234-30678253 None:intergenic 50.0%
GGTGCAGAGAATGAATGGAC+GGG + chr5.2:30678213-30678232 None:intergenic 50.0%
GTCAGCGAGTAAATCAACCG+CGG + chr5.2:30678240-30678259 None:intergenic 50.0%
GTGCCGTAGAATTGTTCCCA+AGG + chr5.2:30679942-30679961 None:intergenic 50.0%
GTGGTAAGCAGATGTCGCAA+GGG + chr5.2:30678563-30678582 None:intergenic 50.0%
GTTCGCCGACAGACAAAGTT+TGG - chr5.2:30678674-30678693 MS.gene55230:intron 50.0%
TATACCTCAAGCATCCGCCA+TGG + chr5.2:30678959-30678978 None:intergenic 50.0%
TCACGAACCTCAATCTCCTG+AGG - chr5.2:30678319-30678338 MS.gene55230:CDS 50.0%
TCACGAACCTCAGGAGATTG+AGG + chr5.2:30678329-30678348 None:intergenic 50.0%
TCCAGAGAGAGTCAGTCCTT+GGG - chr5.2:30679615-30679634 MS.gene55230:CDS 50.0%
TGGGGTGAGAGTCTTGGTAT+AGG + chr5.2:30678381-30678400 None:intergenic 50.0%
TGTGGAAAAAAGACGGTGCC+GGG + chr5.2:30679878-30679897 None:intergenic 50.0%
TTCCAGAGAGAGTCAGTCCT+TGG - chr5.2:30679614-30679633 MS.gene55230:CDS 50.0%
! CAGTATTGAGGTCAAGTGGC+GGG + chr5.2:30678463-30678482 None:intergenic 50.0%
! TCTGGAACGTGCGAGACTTT+AGG + chr5.2:30679601-30679620 None:intergenic 50.0%
! TCTTGGTCTTCACGAACCTC+AGG + chr5.2:30678338-30678357 None:intergenic 50.0%
!! ATTTCTGGCTCAACACGGCT+GGG + chr5.2:30678059-30678078 None:intergenic 50.0%
!! GCCAGATTTCTGGCTCAACA+CGG + chr5.2:30678064-30678083 None:intergenic 50.0%
!! GGTGTTGCTGTTGTCAGTAC+CGG + chr5.2:30680067-30680086 None:intergenic 50.0%
!! TACGGAGGCATTGGAATTGG+CGG - chr5.2:30678727-30678746 MS.gene55230:intron 50.0%
AGAGAGAGTCAGTCCTTGGG+AGG - chr5.2:30679618-30679637 MS.gene55230:CDS 55.0%
AGCATCCGCCATGGACGATT+AGG + chr5.2:30678950-30678969 None:intergenic 55.0%
ATGGACGGGAACGGTCAAGA+AGG + chr5.2:30678199-30678218 None:intergenic 55.0%
CTGCTCCTAATCGTCCATGG+CGG - chr5.2:30678942-30678961 MS.gene55230:intron 55.0%
GAAATCTGGCAGTGCTGTGC+AGG - chr5.2:30678074-30678093 MS.gene55230:CDS 55.0%
GCACAGCACTGCCAGATTTC+TGG + chr5.2:30678074-30678093 None:intergenic 55.0%
GCCGTGTTGAGCCAGAAATC+TGG - chr5.2:30678060-30678079 MS.gene55230:CDS 55.0%
TGGACGGGAACGGTCAAGAA+GGG + chr5.2:30678198-30678217 None:intergenic 55.0%
TTGATTGCATGCAGGGAGCC+CGG - chr5.2:30679857-30679876 MS.gene55230:CDS 55.0%
TTTCGCGCATTCCACTGGCA+CGG + chr5.2:30678432-30678451 None:intergenic 55.0%
! TCCCAAGGACTGACTCTCTC+TGG + chr5.2:30679619-30679638 None:intergenic 55.0%
!! GATTTCTGGCTCAACACGGC+TGG + chr5.2:30678060-30678079 None:intergenic 55.0%
AGGGAGTCCCACGGTAGACA+TGG + chr5.2:30678544-30678563 None:intergenic 60.0%
CATTCTCTGCACCGTCTCCG+CGG - chr5.2:30678220-30678239 MS.gene55230:CDS 60.0%
GATGTCGCAAGGGAGTCCCA+CGG + chr5.2:30678553-30678572 None:intergenic 60.0%
!! TCGTCCATGGCGGATGCTTG+AGG - chr5.2:30678952-30678971 MS.gene55230:intron 60.0%
CGGTGCATTCTCCGTGCCAG+TGG - chr5.2:30678418-30678437 MS.gene55230:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 30678041 30680230 30678041 ID=MS.gene55230
chr5.2 mRNA 30678041 30680230 30678041 ID=MS.gene55230.t1;Parent=MS.gene55230
chr5.2 exon 30679298 30680230 30679298 ID=MS.gene55230.t1.exon1;Parent=MS.gene55230.t1
chr5.2 CDS 30679298 30680230 30679298 ID=cds.MS.gene55230.t1;Parent=MS.gene55230.t1
chr5.2 exon 30678041 30678688 30678041 ID=MS.gene55230.t1.exon2;Parent=MS.gene55230.t1
chr5.2 CDS 30678041 30678688 30678041 ID=cds.MS.gene55230.t1;Parent=MS.gene55230.t1
Gene Sequence

>MS.gene55230

ATGTCTTCTCAGAAACCCAGCCGTGTTGAGCCAGAAATCTGGCAGTGCTGTGCAGGCAGTTCTGTTAAAATTCCAAAACTATATTCTCATGTTTACTATTTCCCATTAGGGCACTTAGAACACATATGTCCATCCCCAAACCTTAACACACTCTCCCTTCTTGACCGTTCCCGTCCATTCATTCTCTGCACCGTCTCCGCGGTTGATTTACTCGCTGACACTCATACCGATGAAGTCTTCGTCAAACTACTCCTCACTCCTGTCACTAATAACGGTGTTCACGAACCTCAATCTCCTGAGGTTCGTGAAGACCAAGATGATGACAAAAAGGTTGTTTCCTATACCAAGACTCTCACCCCATCTGATGCTAACAATGGCGGTGCATTCTCCGTGCCAGTGGAATGCGCGAAATTAATCTTCCCGCCACTTGACCTCAATACTGAAAAGCCGTCTCAAGAACTCTCCATCAGTGATATTCACGGCAAAGTTTGGAATTTTCGCCATGTCTACCGTGGGACTCCCTTGCGACATCTGCTTACCACTGATTGGAGTGAGTTCGTTGACAAGAAGAAACTAGTTGGCGGCGATTCCTTAATTTTCATGAAAGACTCAGACGGAAATATCTCAGTCGGAGTTCGCCGACAGACAAAGTTTGGTGCTGCTGCTAAGATAACAGAAAAATCGTTTACGGAGGCATTGGAATTGGCGGATAAGAACATGGCTTTTGAAGTTGTGTATTATCCGACGGCTAAAGGTTGGTGTAATTTTGTTGTTGATGCCAAAGTTGTGGAGGATGCAATGAATATTAAGTGGAATCTTGGAGGGAGAATTGAACTTTCTTTGAAGAATTTCGATTCTTCAAAGAGATGCTCAAAATTTGAGGGAACAATATCTGCTCTATCTGCTCCTAATCGTCCATGGCGGATGCTTGAGGTATAATGTTATATGTAGTATTTTTTTTTTTTTTGTTTCATAATTGTTATTAGTTAGAAGTTGATACATGATTTTCCCTAGTTAATTATGAGACCAAGTAAGTTACGGTTTATCTTGCAAACAGATATCAAGTTACATTTTATTTTCTTACTGTGAAAAAAACTTAAGTTCCTGTTTAATTAACTTTCTTTTTTAGGGCTGTTATTTGTCTTAATCATCATTATTGTGCCATTAAATTAACTGCAATGACTTCAGAAACATTATACTTATGAAACCATTCTTTATGAAGTTGAAATAGGTCCGTCCAATAAGTTGTCTCAGTTTATGTTTACATTTGTACAGTATACTTTATATAGGCAGATTAATTTTAATGTTTAGAATAAGTTGTTTATATGACAATGATTTTTATATGCGCCTATCAACTTGCTCCAATAGTGATATTTCCTAAGAAATGGTATTTAAGTTTAAGAAACTTTTAAGAAACTCCTATTGTAAATACTCTTAATGTTAAGTAGGATCTTGGTTCATTATGTAGATGCATACTATACCTTATCATATATTTTAAATGATTGGTATTAGATACTCATTATTTTTATCTCAATATCATAGGTTAAATGGGATGAACCTAAAGTCTCGCACGTTCCAGAGAGAGTCAGTCCTTGGGAGGTTGAAACTATTTCCGACATATTTGCACTGTATCCACAATTCCAACCGACAAAAAAGCTTAGAAAATCTGATCAGGATTCTGCTGCATTCAGTGATAAAAAGGGAGACTCCTTCGTCCCAAATATAGAGGCTTTTTTGAAGATGGTCCCAAATATAGAGTTTAAACATTTCGATATGACATCCTCCAATCAAACATTGTTGAACAATGATGCTCTTCTTGATTGCATGCAGGGAGCCCGGCACCGTCTTTTTTCCACATCAACTTCTTCCAACTTTATGAATGATAAAAGCAATGGTTTCCTTGGGAACAATTCTACGGCACTGTTGAGTAATGTGTCAAGTGAGCCAAACAATCTTGGTCCTATATCTTTGGACTTGTCACCTCATAGCCATGATATTTCTAACTCTCTTGTGACAAAGTTTGCCGGTACTGACAACAGCAACACCAAGAAAGTTAGTCCCGGTTCATTTATGCTATTTGGTAAGATCATAAAACCTGTTGGAAGCGATTTTCAAGAAGTAGATATCATGGGAAATGATGATTGTAAAGGCTCCAATGAAATTGAAGGCATCAAACTTGCACAAAAATAG
Protein sequence

>MS.gene55230.t1

MSSQKPSRVEPEIWQCCAGSSVKIPKLYSHVYYFPLGHLEHICPSPNLNTLSLLDRSRPFILCTVSAVDLLADTHTDEVFVKLLLTPVTNNGVHEPQSPEVREDQDDDKKVVSYTKTLTPSDANNGGAFSVPVECAKLIFPPLDLNTEKPSQELSISDIHGKVWNFRHVYRGTPLRHLLTTDWSEFVDKKKLVGGDSLIFMKDSDGNISVGVRRQTKFGAAAKITEKSFTEALELADKNMAFEVVYYPTAKGWCNFVVDAKVVEDAMNIKWNLGGRIELSLKNFDSSKRCSKFEGTISALSAPNRPWRMLEVKWDEPKVSHVPERVSPWEVETISDIFALYPQFQPTKKLRKSDQDSAAFSDKKGDSFVPNIEAFLKMVPNIEFKHFDMTSSNQTLLNNDALLDCMQGARHRLFSTSTSSNFMNDKSNGFLGNNSTALLSNVSSEPNNLGPISLDLSPHSHDISNSLVTKFAGTDNSNTKKVSPGSFMLFGKIIKPVGSDFQEVDIMGNDDCKGSNEIEGIKLAQK