AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55258

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55258.t1 MTR_5g041570 95.476 420 14 2 1 419 23 438 0.0 842
MS.gene55258.t1 MTR_4g082040 56.054 446 150 18 1 419 1 427 5.74e-144 417
MS.gene55258.t1 MTR_7g086960 80.833 120 23 0 105 224 82 201 1.16e-66 216
MS.gene55258.t1 MTR_3g089045 79.508 122 24 1 110 231 14 134 2.74e-61 200
MS.gene55258.t1 MTR_6g074860 66.917 133 43 1 110 241 2 134 1.53e-59 194
MS.gene55258.t1 MTR_6g027370 50.246 203 91 3 77 269 61 263 2.57e-59 197
MS.gene55258.t1 MTR_6g027340 53.077 130 60 1 104 232 8 137 2.89e-45 155
MS.gene55258.t1 MTR_6g027360 54.074 135 58 2 102 232 65 199 1.14e-44 157
MS.gene55258.t1 MTR_4g019370 57.843 102 43 0 111 212 37 138 9.81e-39 143
MS.gene55258.t1 MTR_5g016510 56.436 101 44 0 112 212 5 105 4.36e-38 140
MS.gene55258.t1 MTR_4g094982 57.426 101 43 0 112 212 5 105 2.58e-37 137
MS.gene55258.t1 MTR_7g061330 57.282 103 44 0 111 213 112 214 4.43e-34 134
MS.gene55258.t1 MTR_7g461410 57.282 103 44 0 111 213 112 214 4.43e-34 134
MS.gene55258.t1 MTR_7g061330 57.282 103 44 0 111 213 76 178 8.04e-34 132
MS.gene55258.t1 MTR_6g015455 54.455 101 46 0 112 212 5 105 1.69e-33 134
MS.gene55258.t1 MTR_3g101290 54.455 101 46 0 112 212 37 137 2.12e-33 125
MS.gene55258.t1 MTR_5g082910 50.877 114 52 2 93 206 4 113 2.19e-32 124
MS.gene55258.t1 MTR_1g026870 42.553 141 73 2 111 251 84 216 1.05e-31 128
MS.gene55258.t1 MTR_3g110028 50.980 102 50 0 112 213 85 186 8.84e-31 125
MS.gene55258.t1 MTR_5g070020 47.500 120 63 0 93 212 103 222 5.35e-30 119
MS.gene55258.t1 MTR_3g463400 46.400 125 64 1 99 223 120 241 1.29e-29 120
MS.gene55258.t1 MTR_5g049190 41.135 141 80 2 108 245 15 155 6.13e-29 113
MS.gene55258.t1 MTR_4g105660 45.038 131 68 2 111 237 179 309 7.66e-29 117
MS.gene55258.t1 MTR_3g077650 40.816 147 83 2 95 237 164 310 2.63e-27 113
MS.gene55258.t1 MTR_7g037260 48.544 103 53 0 110 212 143 245 4.47e-27 111
MS.gene55258.t1 MTR_5g010650 54.348 92 42 0 115 206 113 204 9.02e-27 112
MS.gene55258.t1 MTR_7g451170 48.515 101 52 0 112 212 191 291 9.04e-27 111
MS.gene55258.t1 MTR_2g064160 47.273 110 55 2 109 216 10 118 2.44e-26 108
MS.gene55258.t1 MTR_1g076150 41.860 129 72 2 112 238 14 141 4.22e-26 106
MS.gene55258.t1 MTR_2g089450 45.133 113 59 2 112 222 14 125 4.26e-26 106
MS.gene55258.t1 MTR_3g461490 46.078 102 54 1 112 212 14 115 5.95e-26 107
MS.gene55258.t1 MTR_7g450950 40.984 122 71 1 106 227 151 271 8.44e-26 107
MS.gene55258.t1 MTR_0008s0390 49.515 103 49 2 112 212 15 116 9.40e-26 105
MS.gene55258.t1 MTR_2g067420 49.505 101 50 1 108 207 12 112 1.31e-25 106
MS.gene55258.t1 MTR_2g089420 41.176 119 67 2 112 228 13 130 1.38e-25 108
MS.gene55258.t1 MTR_0251s0050 40.441 136 78 2 106 239 9 143 1.40e-25 105
MS.gene55258.t1 MTR_6g055910 43.519 108 60 1 106 212 10 117 2.28e-25 105
MS.gene55258.t1 MTR_4g063100 48.544 103 50 2 112 212 9 110 2.77e-25 103
MS.gene55258.t1 MTR_0008s0470 49.515 103 49 2 112 212 15 116 3.68e-25 104
MS.gene55258.t1 MTR_8g017440 47.170 106 53 2 109 212 11 115 5.80e-25 105
MS.gene55258.t1 MTR_4g088015 47.000 100 53 0 112 211 221 320 6.07e-25 106
MS.gene55258.t1 MTR_7g037130 50.000 96 48 0 112 207 145 240 8.51e-25 104
MS.gene55258.t1 MTR_8g098860 43.590 117 60 2 105 215 2 118 1.51e-24 103
MS.gene55258.t1 MTR_4g100720 42.157 102 58 1 112 212 15 116 1.63e-24 99.8
MS.gene55258.t1 MTR_7g017260 40.650 123 68 2 93 212 10 130 1.81e-24 102
MS.gene55258.t1 MTR_4g091490 39.189 148 73 3 101 247 8 139 2.13e-24 103
MS.gene55258.t1 MTR_3g052450 42.727 110 62 1 112 220 42 151 2.21e-24 105
MS.gene55258.t1 MTR_3g028740 42.735 117 66 1 99 214 11 127 2.33e-24 103
MS.gene55258.t1 MTR_5g042030 45.098 102 55 1 112 212 9 110 2.76e-24 102
MS.gene55258.t1 MTR_8g060940 46.000 100 53 1 112 210 9 108 3.08e-24 100
MS.gene55258.t1 MTR_1g100653 36.145 166 85 4 112 257 14 178 3.33e-24 102
MS.gene55258.t1 MTR_8g017540 43.333 120 60 3 100 212 43 161 5.01e-24 103
MS.gene55258.t1 MTR_1g112760 42.727 110 60 2 109 216 12 120 5.06e-24 100
MS.gene55258.t1 MTR_4g125520 33.721 172 104 4 105 266 2 173 5.50e-24 101
MS.gene55258.t1 MTR_7g115650 43.810 105 58 1 112 215 14 118 5.58e-24 99.4
MS.gene55258.t1 MTR_3g052430 42.727 110 62 1 112 220 43 152 5.76e-24 104
MS.gene55258.t1 MTR_3g074520 44.828 116 56 3 105 213 2 116 6.22e-24 102
MS.gene55258.t1 MTR_1g085040 42.202 109 60 2 109 215 11 118 1.01e-23 102
MS.gene55258.t1 MTR_7g110830 41.284 109 63 1 109 216 11 119 1.07e-23 102
MS.gene55258.t1 MTR_3g077110 42.727 110 60 2 109 216 11 119 1.10e-23 101
MS.gene55258.t1 MTR_7g035350 44.144 111 61 1 115 225 228 337 1.12e-23 102
MS.gene55258.t1 MTR_8g017500 45.283 106 55 2 109 212 11 115 1.24e-23 101
MS.gene55258.t1 MTR_1g110460 36.025 161 87 4 97 246 18 173 1.36e-23 100
MS.gene55258.t1 MTR_5g078860 44.118 102 56 1 112 212 9 110 1.46e-23 100
MS.gene55258.t1 MTR_5g079220 43.137 102 57 1 112 212 23 124 1.47e-23 99.8
MS.gene55258.t1 MTR_5g010020 48.980 98 49 1 109 205 11 108 1.55e-23 100
MS.gene55258.t1 MTR_0001s0360 32.941 170 99 4 112 278 9 166 1.86e-23 99.0
MS.gene55258.t1 MTR_1g100667 42.857 105 59 1 109 212 12 116 2.02e-23 99.4
MS.gene55258.t1 MTR_2g096380 43.925 107 57 2 112 216 8 113 2.05e-23 98.6
MS.gene55258.t1 MTR_2g099740 46.226 106 54 2 109 212 11 115 2.10e-23 101
MS.gene55258.t1 MTR_5g014990 35.227 176 99 6 112 276 14 185 3.34e-23 99.4
MS.gene55258.t1 MTR_4g105130 40.367 109 64 1 109 216 11 119 3.78e-23 100
MS.gene55258.t1 MTR_1g085640 40.367 109 64 1 109 216 11 119 3.79e-23 100
MS.gene55258.t1 MTR_4g065017 40.164 122 69 2 97 217 7 125 4.79e-23 99.4
MS.gene55258.t1 MTR_8g017390 46.226 106 55 1 109 212 11 116 4.88e-23 101
MS.gene55258.t1 MTR_8g017340 46.226 106 55 1 109 212 11 116 5.24e-23 101
MS.gene55258.t1 MTR_8g042410 37.748 151 85 3 90 232 11 160 6.00e-23 101
MS.gene55258.t1 MTR_5g078800 42.157 102 58 1 112 212 9 110 6.35e-23 97.8
MS.gene55258.t1 MTR_2g097910 42.727 110 60 2 112 219 22 130 8.62e-23 98.6
MS.gene55258.t1 MTR_8g020490 38.889 108 65 1 112 218 10 117 9.85e-23 97.1
MS.gene55258.t1 MTR_5g079670 45.192 104 54 2 112 213 13 115 9.93e-23 95.9
MS.gene55258.t1 MTR_6g009430 45.098 102 55 1 112 212 14 115 1.05e-22 98.6
MS.gene55258.t1 MTR_1g021230 45.946 111 57 2 112 220 59 168 1.20e-22 99.8
MS.gene55258.t1 MTR_1g057980 45.745 94 51 0 112 205 80 173 1.20e-22 97.8
MS.gene55258.t1 MTR_0063s0090 39.496 119 64 3 112 223 14 131 1.24e-22 95.9
MS.gene55258.t1 MTR_5g029840 42.105 114 60 2 105 212 2 115 1.29e-22 98.2
MS.gene55258.t1 MTR_7g111290 46.000 100 51 2 109 206 11 109 1.32e-22 99.0
MS.gene55258.t1 MTR_2g011660 43.363 113 59 2 101 212 8 116 1.35e-22 98.6
MS.gene55258.t1 MTR_5g079290 42.157 102 58 1 112 212 19 120 1.51e-22 96.7
MS.gene55258.t1 MTR_4g073420 42.241 116 59 3 105 213 2 116 1.82e-22 97.1
MS.gene55258.t1 MTR_2g089620 45.283 106 57 1 108 212 10 115 1.89e-22 97.8
MS.gene55258.t1 MTR_5g078910 42.157 102 58 1 112 212 9 110 2.06e-22 97.1
MS.gene55258.t1 MTR_5g007370 39.098 133 75 3 108 235 10 141 3.15e-22 96.7
MS.gene55258.t1 MTR_1g043080 39.098 133 74 3 112 238 14 145 3.39e-22 95.5
MS.gene55258.t1 MTR_8g017350 45.283 106 56 1 109 212 11 116 3.98e-22 99.4
MS.gene55258.t1 MTR_3g097450 43.269 104 56 2 112 213 14 116 4.38e-22 96.3
MS.gene55258.t1 MTR_4g478180 39.098 133 75 3 108 235 11 142 5.06e-22 97.1
MS.gene55258.t1 MTR_1g073170 41.818 110 61 2 112 219 22 130 6.68e-22 94.7
MS.gene55258.t1 MTR_1g017000 43.925 107 58 2 109 213 11 117 6.83e-22 94.7
MS.gene55258.t1 MTR_1g083630 41.026 117 61 2 92 207 1 110 7.25e-22 98.6
MS.gene55258.t1 MTR_7g010210 41.905 105 60 1 112 215 14 118 8.47e-22 95.9
MS.gene55258.t1 MTR_3g011610 43.243 111 60 2 112 220 39 148 9.00e-22 97.8
MS.gene55258.t1 MTR_5g078950 41.509 106 59 2 103 207 2 105 1.02e-21 94.4
MS.gene55258.t1 MTR_7g096930 44.231 104 55 2 112 213 14 116 1.24e-21 94.4
MS.gene55258.t1 MTR_1g062940 41.441 111 62 2 112 220 8 117 1.28e-21 92.8
MS.gene55258.t1 MTR_8g027345 39.474 114 63 2 105 212 2 115 1.28e-21 94.7
MS.gene55258.t1 MTR_7g010210 40.367 109 64 1 112 219 14 122 1.33e-21 94.4
MS.gene55258.t1 MTR_1g043050 33.540 161 100 3 112 266 14 173 2.06e-21 93.2
MS.gene55258.t1 MTR_8g006470 50.000 96 46 2 112 205 12 107 2.22e-21 94.0
MS.gene55258.t1 MTR_0008s0280 43.299 97 52 2 112 206 14 109 2.26e-21 92.4
MS.gene55258.t1 MTR_4g097570 40.323 124 67 3 112 228 14 137 2.46e-21 94.0
MS.gene55258.t1 MTR_3g103570 39.344 122 67 3 112 226 14 135 2.68e-21 94.7
MS.gene55258.t1 MTR_1g086530 40.566 106 60 2 112 215 35 139 2.79e-21 93.6
MS.gene55258.t1 MTR_0247s0040 42.157 102 58 1 105 205 2 103 3.02e-21 90.9
MS.gene55258.t1 MTR_1g045610 44.660 103 54 2 112 212 23 124 3.03e-21 92.8
MS.gene55258.t1 MTR_7g117730 37.288 118 68 2 105 216 2 119 4.20e-21 92.4
MS.gene55258.t1 MTR_3g083540 39.623 106 63 1 112 216 43 148 4.56e-21 93.2
MS.gene55258.t1 MTR_5g079120 41.121 107 62 1 112 217 63 169 5.63e-21 93.2
MS.gene55258.t1 MTR_1g017140 36.641 131 77 3 112 236 14 144 7.14e-21 93.6
MS.gene55258.t1 MTR_6g090405 35.256 156 94 3 108 261 10 160 7.65e-21 91.7
MS.gene55258.t1 MTR_0197s0010 40.171 117 67 2 115 229 6 121 9.83e-21 90.9
MS.gene55258.t1 MTR_1g086510 37.500 120 70 2 97 215 12 127 1.08e-20 91.7
MS.gene55258.t1 MTR_4g097570 39.837 123 68 3 112 228 14 136 2.16e-20 91.3
MS.gene55258.t1 MTR_8g095390 42.157 102 58 1 112 212 14 115 2.58e-20 91.3
MS.gene55258.t1 MTR_0140s0030 41.818 110 62 2 112 219 15 124 2.58e-20 91.7
MS.gene55258.t1 MTR_0489s0020 41.818 110 62 2 112 219 15 124 2.58e-20 91.7
MS.gene55258.t1 MTR_7g035075 37.607 117 72 1 100 215 4 120 2.77e-20 89.0
MS.gene55258.t1 MTR_6g055910 47.500 80 42 0 133 212 9 88 3.01e-20 90.1
MS.gene55258.t1 MTR_4g057635 41.121 107 61 2 108 212 10 116 3.02e-20 91.3
MS.gene55258.t1 MTR_2g088170 42.188 128 71 2 89 214 8 134 4.08e-20 92.4
MS.gene55258.t1 MTR_4g102380 43.269 104 56 2 112 213 14 116 5.59e-20 89.7
MS.gene55258.t1 MTR_4g029540 41.085 129 60 4 112 238 12 126 6.11e-20 90.1
MS.gene55258.t1 MTR_4g082230 38.261 115 65 2 105 213 2 116 6.99e-20 91.3
MS.gene55258.t1 MTR_4g485530 34.965 143 83 3 112 246 14 154 7.69e-20 87.4
MS.gene55258.t1 MTR_6g006030 38.983 118 69 2 100 215 4 120 9.06e-20 87.4
MS.gene55258.t1 MTR_5g078930 42.424 99 56 1 115 212 14 112 1.20e-19 87.4
MS.gene55258.t1 MTR_7g076740 43.396 106 56 3 112 214 14 118 1.27e-19 89.4
MS.gene55258.t1 MTR_8g031360 44.762 105 54 3 112 213 15 118 1.52e-19 89.0
MS.gene55258.t1 MTR_2g095520 42.857 98 54 2 112 207 14 111 2.05e-19 89.0
MS.gene55258.t1 MTR_6g012180 42.268 97 55 1 112 207 14 110 2.35e-19 88.6
MS.gene55258.t1 MTR_7g087130 40.367 109 64 1 112 219 14 122 2.43e-19 89.0
MS.gene55258.t1 MTR_7g102110 40.777 103 59 2 112 212 14 116 2.56e-19 87.8
MS.gene55258.t1 MTR_3g065440 37.008 127 77 2 112 236 14 139 2.64e-19 88.6
MS.gene55258.t1 MTR_5g062790 40.164 122 63 4 107 226 6 119 3.39e-19 87.8
MS.gene55258.t1 MTR_0193s0090 39.423 104 62 1 105 207 2 105 3.68e-19 85.9
MS.gene55258.t1 MTR_5g078140 41.509 106 59 2 112 215 14 118 4.70e-19 87.8
MS.gene55258.t1 MTR_6g012690 38.261 115 65 2 105 213 2 116 4.71e-19 88.2
MS.gene55258.t1 MTR_4g128670 42.857 98 54 2 112 207 14 111 4.86e-19 88.2
MS.gene55258.t1 MTR_7g011170 39.655 116 62 3 105 213 2 116 5.07e-19 87.4
MS.gene55258.t1 MTR_4g082290 38.261 115 65 2 105 213 2 116 5.67e-19 88.6
MS.gene55258.t1 MTR_5g038910 33.333 105 70 0 115 219 29 133 8.02e-19 88.2
MS.gene55258.t1 MTR_3g039990 39.048 105 63 1 112 215 15 119 8.64e-19 87.0
MS.gene55258.t1 MTR_5g038910 33.333 105 70 0 115 219 29 133 1.03e-18 88.2
MS.gene55258.t1 MTR_2g034790 39.216 102 61 1 112 212 14 115 1.40e-18 86.7
MS.gene55258.t1 MTR_5g088610 37.391 115 67 3 107 219 6 117 1.51e-18 86.7
MS.gene55258.t1 MTR_5g088640 39.450 109 61 3 108 214 10 115 1.53e-18 85.5
MS.gene55258.t1 MTR_5g088080 40.952 105 57 3 112 214 14 115 1.56e-18 85.5
MS.gene55258.t1 MTR_5g088150 40.952 105 57 3 112 214 14 115 1.56e-18 85.5
MS.gene55258.t1 MTR_5g488210 40.952 105 57 3 112 214 14 115 1.56e-18 85.5
MS.gene55258.t1 MTR_4g063100 52.941 68 32 0 145 212 14 81 2.48e-18 84.0
MS.gene55258.t1 MTR_8g468380 32.308 130 85 1 100 226 7 136 2.82e-18 86.7
MS.gene55258.t1 MTR_5g488170 40.952 105 57 3 112 214 14 115 2.88e-18 84.0
MS.gene55258.t1 MTR_4g121460 29.677 155 91 2 112 248 14 168 3.36e-18 85.5
MS.gene55258.t1 MTR_3g045430 37.500 112 67 3 106 215 9 119 1.45e-17 83.2
MS.gene55258.t1 MTR_7g111290 53.226 62 29 0 145 206 6 67 2.05e-17 83.2
MS.gene55258.t1 MTR_7g061550 36.842 114 69 1 112 222 7 120 2.77e-17 83.2
MS.gene55258.t1 MTR_2g033170 40.000 105 62 1 112 215 26 130 3.53e-17 82.4
MS.gene55258.t1 MTR_4g123040 42.268 97 55 1 112 207 26 122 1.32e-16 80.5
MS.gene55258.t1 MTR_2g096380 45.833 72 39 0 145 216 23 94 1.49e-16 78.6
MS.gene55258.t1 MTR_1g008970 46.970 66 35 0 138 203 117 182 1.59e-14 73.6
MS.gene55258.t1 MTR_7g109320 38.835 103 62 1 112 213 14 116 4.63e-14 73.6
MS.gene55258.t1 MTR_6g080360 36.957 92 57 1 114 205 481 571 5.50e-14 74.7
MS.gene55258.t1 MTR_6g080360 29.496 139 95 2 112 248 530 667 2.51e-12 69.3
MS.gene55258.t1 MTR_6g080360 37.363 91 56 1 115 205 262 351 8.32e-14 73.9
MS.gene55258.t1 MTR_6g080360 29.496 139 95 2 112 248 310 447 6.82e-12 67.8
MS.gene55258.t1 MTR_4g128190 36.364 110 56 4 112 220 13 109 1.48e-13 70.5
MS.gene55258.t1 MTR_5g007300 42.169 83 46 2 104 185 59 140 8.01e-13 65.9
MS.gene55258.t1 MTR_0023s0210 36.250 80 50 1 107 185 4 83 6.20e-12 61.6
MS.gene55258.t1 MTR_7g035300 31.618 136 72 5 115 250 79 193 1.61e-11 64.3
MS.gene55258.t1 MTR_7g115550 37.647 85 52 1 113 197 8 91 2.24e-11 66.2
MS.gene55258.t1 MTR_7g115550 32.990 97 64 1 113 209 8 103 3.44e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55258.t1 AT1G69560 54.217 249 85 4 1 237 1 232 4.23e-80 250
MS.gene55258.t1 AT1G69560 54.217 249 85 4 1 237 17 248 5.15e-80 251
MS.gene55258.t1 AT1G26780 89.831 118 12 0 111 228 97 214 3.72e-75 236
MS.gene55258.t1 AT1G26780 89.831 118 12 0 111 228 97 214 2.05e-74 236
MS.gene55258.t1 AT3G29020 73.504 117 31 0 107 223 60 176 1.04e-61 199
MS.gene55258.t1 AT5G17800 83.019 106 18 0 110 215 91 196 1.13e-61 202
MS.gene55258.t1 AT3G29020 73.504 117 31 0 107 223 62 178 4.27e-61 200
MS.gene55258.t1 AT1G17950 78.704 108 23 0 110 217 3 110 7.02e-60 195
MS.gene55258.t1 AT1G73410 80.556 108 21 0 110 217 4 111 6.58e-57 187
MS.gene55258.t1 AT1G73410 80.556 108 21 0 110 217 4 111 1.76e-56 185
MS.gene55258.t1 AT4G33450 61.871 139 52 1 103 241 11 148 1.43e-55 184
MS.gene55258.t1 AT5G39700 64.486 107 38 0 113 219 57 163 3.59e-46 157
MS.gene55258.t1 AT2G39880 45.161 155 82 1 99 253 37 188 8.41e-39 143
MS.gene55258.t1 AT5G67300 57.426 101 43 0 112 212 6 106 4.55e-37 137
MS.gene55258.t1 AT4G37260 56.436 101 44 0 112 212 13 113 1.66e-36 136
MS.gene55258.t1 AT3G55730 54.286 105 48 0 111 215 55 159 1.96e-36 138
MS.gene55258.t1 AT2G23290 56.436 101 44 0 112 212 13 113 8.15e-36 134
MS.gene55258.t1 AT3G09230 54.369 103 47 0 111 213 54 156 6.13e-35 134
MS.gene55258.t1 AT3G50060 53.922 102 47 0 111 212 5 106 9.05e-34 128
MS.gene55258.t1 AT3G09370 56.436 101 44 0 112 212 130 230 4.75e-33 130
MS.gene55258.t1 AT3G09370 56.436 101 44 0 112 212 135 235 5.15e-33 130
MS.gene55258.t1 AT3G09370 56.436 101 44 0 112 212 143 243 7.94e-33 130
MS.gene55258.t1 AT5G02320 54.902 102 46 0 111 212 126 227 2.18e-32 129
MS.gene55258.t1 AT5G02320 54.902 102 46 0 111 212 126 227 2.18e-32 129
MS.gene55258.t1 AT5G02320 54.902 102 46 0 111 212 66 167 2.41e-32 128
MS.gene55258.t1 AT5G11510 49.020 102 52 0 111 212 80 181 6.92e-30 123
MS.gene55258.t1 AT5G11510 49.020 102 52 0 111 212 80 181 6.92e-30 123
MS.gene55258.t1 AT5G11510 49.020 102 52 0 111 212 80 181 6.92e-30 123
MS.gene55258.t1 AT5G11510 49.020 102 52 0 111 212 80 181 7.58e-30 122
MS.gene55258.t1 AT5G11510 49.020 102 52 0 111 212 80 181 7.65e-30 122
MS.gene55258.t1 AT4G32730 48.544 103 53 0 111 213 86 188 1.76e-29 121
MS.gene55258.t1 AT4G32730 48.544 103 53 0 111 213 86 188 1.76e-29 121
MS.gene55258.t1 AT4G32730 48.544 103 53 0 111 213 86 188 1.76e-29 121
MS.gene55258.t1 AT4G32730 48.544 103 53 0 111 213 86 188 1.76e-29 121
MS.gene55258.t1 AT5G58850 43.704 135 72 1 107 241 100 230 1.86e-29 119
MS.gene55258.t1 AT4G32730 48.544 103 53 0 111 213 86 188 1.98e-29 121
MS.gene55258.t1 AT2G25230 46.729 107 55 2 106 211 20 125 9.40e-29 113
MS.gene55258.t1 AT5G11050 48.333 120 57 2 112 231 105 219 9.51e-29 117
MS.gene55258.t1 AT3G27785 42.975 121 69 0 106 226 183 303 2.53e-28 116
MS.gene55258.t1 AT3G12720 49.091 110 53 2 109 216 21 129 1.25e-27 112
MS.gene55258.t1 AT5G40360 42.500 120 66 1 103 222 149 265 9.31e-27 110
MS.gene55258.t1 AT4G18770 39.726 146 79 2 106 242 211 356 9.81e-27 111
MS.gene55258.t1 AT5G40330 43.636 110 61 1 104 212 6 115 1.24e-26 107
MS.gene55258.t1 AT5G14750 46.078 102 54 1 112 212 18 119 1.85e-26 105
MS.gene55258.t1 AT1G79180 46.429 112 57 2 108 217 12 122 4.69e-26 107
MS.gene55258.t1 AT3G27920 41.228 114 66 1 100 212 4 117 1.02e-25 104
MS.gene55258.t1 AT3G28470 48.485 99 50 1 108 205 10 108 1.20e-25 106
MS.gene55258.t1 AT2G26960 34.737 190 115 4 98 280 8 195 1.43e-25 108
MS.gene55258.t1 AT4G28110 43.478 115 59 2 105 213 2 116 3.96e-25 104
MS.gene55258.t1 AT4G25560 43.519 108 60 1 112 218 12 119 4.04e-25 104
MS.gene55258.t1 AT4G26930 42.400 125 71 1 97 220 6 130 5.95e-25 105
MS.gene55258.t1 AT1G63910 43.697 119 66 1 109 226 11 129 6.83e-25 105
MS.gene55258.t1 AT5G54230 46.078 102 54 1 112 212 14 115 1.56e-24 103
MS.gene55258.t1 AT5G65230 47.115 104 52 2 112 213 14 116 2.73e-24 102
MS.gene55258.t1 AT3G23250 43.810 105 58 1 112 215 14 118 3.03e-24 102
MS.gene55258.t1 AT4G05100 43.478 115 58 2 105 212 2 116 3.86e-24 102
MS.gene55258.t1 AT5G10280 39.231 130 76 2 108 235 10 138 5.53e-24 102
MS.gene55258.t1 AT3G30210 39.062 128 72 3 110 235 27 150 6.00e-24 100
MS.gene55258.t1 AT3G53200 44.860 107 56 2 112 216 11 116 6.37e-24 100
MS.gene55258.t1 AT1G18570 44.340 106 58 1 112 216 15 120 8.45e-24 102
MS.gene55258.t1 AT1G09540 37.857 140 77 3 109 246 11 142 8.79e-24 102
MS.gene55258.t1 AT3G13890 36.552 145 91 1 109 252 11 155 8.81e-24 102
MS.gene55258.t1 AT3G48920 46.875 96 50 1 112 206 20 115 1.09e-23 99.8
MS.gene55258.t1 AT4G01680 42.056 107 61 1 109 214 11 117 1.16e-23 101
MS.gene55258.t1 AT4G01680 42.056 107 61 1 109 214 11 117 1.30e-23 99.4
MS.gene55258.t1 AT5G12870 40.870 115 67 1 106 219 14 128 1.31e-23 100
MS.gene55258.t1 AT5G56110 45.631 103 55 1 112 213 14 116 1.47e-23 100
MS.gene55258.t1 AT3G11440 42.342 111 63 1 105 214 36 146 1.52e-23 102
MS.gene55258.t1 AT5G60890 42.453 106 60 1 112 216 14 119 1.76e-23 100
MS.gene55258.t1 AT1G56160 44.340 106 56 2 109 212 13 117 1.77e-23 100
MS.gene55258.t1 AT2G31180 36.196 163 89 3 112 272 14 163 2.35e-23 98.6
MS.gene55258.t1 AT3G11440 39.098 133 75 2 83 214 19 146 2.70e-23 102
MS.gene55258.t1 AT3G11440 39.098 133 75 2 83 214 19 146 2.70e-23 102
MS.gene55258.t1 AT3G11440 39.098 133 75 2 83 214 19 146 2.70e-23 102
MS.gene55258.t1 AT3G46130 44.860 107 56 2 112 216 11 116 2.76e-23 98.6
MS.gene55258.t1 AT3G12820 45.370 108 56 2 108 213 12 118 2.84e-23 98.2
MS.gene55258.t1 AT2G26950 42.857 105 56 2 111 214 17 118 3.03e-23 100
MS.gene55258.t1 AT5G59780 43.925 107 57 2 112 216 10 115 3.10e-23 97.8
MS.gene55258.t1 AT5G26660 42.727 110 60 2 109 216 11 119 3.59e-23 100
MS.gene55258.t1 AT5G52600 43.396 106 59 1 108 212 10 115 3.73e-23 96.7
MS.gene55258.t1 AT5G40430 40.566 106 62 1 106 211 48 152 4.53e-23 98.2
MS.gene55258.t1 AT3G13890 35.065 154 90 2 109 252 11 164 5.13e-23 100
MS.gene55258.t1 AT1G57560 41.818 110 61 2 109 216 11 119 6.67e-23 99.0
MS.gene55258.t1 AT4G00540 46.667 105 53 1 112 213 103 207 7.71e-23 100
MS.gene55258.t1 AT1G57560 41.818 110 61 2 109 216 11 119 7.78e-23 97.8
MS.gene55258.t1 AT2G32460 44.144 111 59 2 112 220 20 129 1.16e-22 100
MS.gene55258.t1 AT5G14340 44.762 105 55 2 112 214 26 129 1.19e-22 97.4
MS.gene55258.t1 AT1G16490 41.964 112 62 2 108 217 12 122 1.35e-22 97.1
MS.gene55258.t1 AT2G32460 44.144 111 59 2 112 220 8 117 1.41e-22 100
MS.gene55258.t1 AT1G79180 37.500 144 56 2 108 217 12 155 1.43e-22 98.2
MS.gene55258.t1 AT4G00540 46.667 105 53 1 112 213 101 205 1.66e-22 99.4
MS.gene55258.t1 AT4G00540 30.435 138 87 2 78 206 10 147 2.87e-11 65.5
MS.gene55258.t1 AT4G38620 42.241 116 59 3 105 213 2 116 1.67e-22 97.1
MS.gene55258.t1 AT5G06100 39.370 127 69 2 96 214 11 137 1.87e-22 99.4
MS.gene55258.t1 AT1G06180 44.231 104 55 2 112 213 14 116 1.94e-22 95.9
MS.gene55258.t1 AT5G16770 37.857 140 78 3 105 235 2 141 2.39e-22 97.4
MS.gene55258.t1 AT5G16770 37.857 140 78 3 105 235 2 141 2.39e-22 97.4
MS.gene55258.t1 AT1G35515 39.474 114 63 2 105 212 2 115 2.95e-22 94.7
MS.gene55258.t1 AT4G01680 39.496 119 59 2 109 214 11 129 3.07e-22 97.4
MS.gene55258.t1 AT5G16770 37.857 140 78 3 105 235 2 141 3.14e-22 97.4
MS.gene55258.t1 AT5G16770 37.857 140 78 3 105 235 2 141 3.14e-22 97.4
MS.gene55258.t1 AT2G47190 39.344 122 69 2 94 214 8 125 3.35e-22 95.9
MS.gene55258.t1 AT5G06100 39.370 127 69 2 96 214 11 137 3.44e-22 99.0
MS.gene55258.t1 AT5G06100 39.370 127 69 2 96 214 11 137 3.44e-22 99.0
MS.gene55258.t1 AT5G06100 39.370 127 69 2 96 214 11 137 3.44e-22 99.0
MS.gene55258.t1 AT5G06100 39.370 127 69 2 96 214 11 137 3.44e-22 99.0
MS.gene55258.t1 AT4G17785 42.017 119 66 2 99 215 2 119 3.59e-22 97.4
MS.gene55258.t1 AT4G17785 42.017 119 66 2 99 215 2 119 4.04e-22 97.4
MS.gene55258.t1 AT1G74080 47.368 95 49 1 112 205 14 108 4.89e-22 96.7
MS.gene55258.t1 AT1G22640 42.241 116 59 3 105 213 2 116 5.92e-22 94.7
MS.gene55258.t1 AT5G61420 43.396 106 59 1 112 216 14 119 6.43e-22 97.1
MS.gene55258.t1 AT3G02940 42.105 114 60 2 105 212 2 115 7.05e-22 95.9
MS.gene55258.t1 AT3G02940 42.105 114 60 2 105 212 2 115 9.60e-22 95.5
MS.gene55258.t1 AT3G02940 42.105 114 60 2 105 212 2 115 9.60e-22 95.5
MS.gene55258.t1 AT5G52260 46.154 104 53 2 112 213 14 116 9.85e-22 94.7
MS.gene55258.t1 AT4G21440 45.098 102 55 1 112 212 14 115 1.19e-21 95.9
MS.gene55258.t1 AT3G13540 36.000 125 73 2 99 216 6 130 1.50e-21 93.6
MS.gene55258.t1 AT3G61250 41.667 132 62 4 112 240 14 133 1.65e-21 94.7
MS.gene55258.t1 AT5G62470 41.346 104 61 0 112 215 14 117 1.69e-21 95.5
MS.gene55258.t1 AT1G34670 40.870 115 62 2 105 213 2 116 1.79e-21 95.5
MS.gene55258.t1 AT5G55020 42.727 110 62 1 112 220 28 137 1.85e-21 97.1
MS.gene55258.t1 AT2G02820 36.697 109 69 0 115 223 33 141 2.27e-21 96.3
MS.gene55258.t1 AT5G57620 41.121 107 61 2 108 212 10 116 2.34e-21 94.7
MS.gene55258.t1 AT2G02820 36.697 109 69 0 115 223 33 141 2.63e-21 94.7
MS.gene55258.t1 AT5G23000 42.593 108 58 2 108 212 10 116 2.67e-21 94.4
MS.gene55258.t1 AT4G09460 40.000 115 61 3 105 212 2 115 2.81e-21 92.4
MS.gene55258.t1 AT3G08500 40.179 112 66 1 104 214 24 135 2.99e-21 94.7
MS.gene55258.t1 AT2G02820 36.697 109 69 0 115 223 33 141 3.39e-21 95.9
MS.gene55258.t1 AT3G01140 41.228 114 61 2 105 212 2 115 3.72e-21 94.4
MS.gene55258.t1 AT3G24310 40.000 115 66 2 112 224 20 133 4.11e-21 92.8
MS.gene55258.t1 AT1G74430 40.566 106 62 1 112 216 14 119 4.65e-21 92.8
MS.gene55258.t1 AT5G14750 50.725 69 34 0 145 213 18 86 4.86e-21 90.1
MS.gene55258.t1 AT5G07700 45.098 102 55 1 112 212 14 115 6.36e-21 93.6
MS.gene55258.t1 AT5G07700 45.098 102 55 1 112 212 14 115 6.36e-21 93.6
MS.gene55258.t1 AT4G34990 40.000 115 63 2 105 213 2 116 7.32e-21 92.0
MS.gene55258.t1 AT3G01140 43.137 102 57 1 112 212 57 158 7.47e-21 94.0
MS.gene55258.t1 AT4G13480 43.810 105 56 2 112 214 8 111 7.65e-21 92.0
MS.gene55258.t1 AT5G65790 38.655 119 70 3 112 227 14 132 8.41e-21 93.6
MS.gene55258.t1 AT5G35550 37.815 119 72 2 112 228 16 134 9.62e-21 91.7
MS.gene55258.t1 AT1G18710 41.176 102 59 1 112 212 14 115 1.06e-20 91.7
MS.gene55258.t1 AT5G15310 40.351 114 62 2 105 212 2 115 1.17e-20 92.4
MS.gene55258.t1 AT5G16600 35.862 145 85 4 112 253 14 153 1.31e-20 92.4
MS.gene55258.t1 AT3G49690 42.718 103 57 2 112 212 14 116 1.41e-20 92.0
MS.gene55258.t1 AT5G15310 40.351 114 62 2 105 212 2 115 1.44e-20 92.0
MS.gene55258.t1 AT1G25340 39.423 104 59 1 112 215 20 119 1.61e-20 91.3
MS.gene55258.t1 AT1G25340 40.566 106 60 2 112 215 20 124 1.73e-20 91.3
MS.gene55258.t1 AT2G16720 39.655 116 62 3 105 213 2 116 1.91e-20 90.9
MS.gene55258.t1 AT5G40350 28.704 216 124 7 108 321 15 202 2.04e-20 89.7
MS.gene55258.t1 AT3G60460 42.857 112 62 2 105 214 6 117 2.05e-20 91.3
MS.gene55258.t1 AT5G07690 43.564 101 56 1 112 211 14 114 2.29e-20 92.0
MS.gene55258.t1 AT1G68320 41.509 106 59 2 112 215 21 125 2.34e-20 90.9
MS.gene55258.t1 AT5G15310 40.351 114 62 2 105 212 2 115 2.42e-20 90.1
MS.gene55258.t1 AT3G27810 41.441 111 63 2 108 217 18 127 2.83e-20 89.4
MS.gene55258.t1 AT3G47600 40.952 105 61 1 112 215 14 118 3.08e-20 91.7
MS.gene55258.t1 AT1G25340 39.423 104 59 1 112 215 20 119 3.36e-20 90.9
MS.gene55258.t1 AT1G08810 40.336 119 68 2 112 229 14 130 3.95e-20 90.1
MS.gene55258.t1 AT1G14350 36.522 115 70 1 106 217 16 130 4.06e-20 92.4
MS.gene55258.t1 AT1G14350 36.522 115 70 1 106 217 16 130 4.06e-20 92.4
MS.gene55258.t1 AT5G62470 40.952 105 61 1 112 215 14 118 6.45e-20 90.9
MS.gene55258.t1 AT4G12350 41.346 104 58 2 112 213 14 116 6.47e-20 89.7
MS.gene55258.t1 AT1G66370 34.884 129 80 3 105 231 2 128 6.96e-20 89.0
MS.gene55258.t1 AT3G01530 42.593 108 59 2 112 217 27 133 1.12e-19 87.4
MS.gene55258.t1 AT1G66380 39.091 110 66 1 105 213 3 112 1.44e-19 85.1
MS.gene55258.t1 AT1G74650 41.748 103 59 1 112 213 14 116 1.71e-19 89.4
MS.gene55258.t1 AT5G49330 40.777 103 60 1 112 213 14 116 1.89e-19 89.4
MS.gene55258.t1 AT4G22680 42.718 103 56 2 112 212 14 115 2.18e-19 87.8
MS.gene55258.t1 AT1G48000 43.158 95 53 1 112 205 34 128 2.43e-19 87.0
MS.gene55258.t1 AT2G47460 37.500 128 76 2 112 238 14 138 2.58e-19 89.4
MS.gene55258.t1 AT3G28910 42.157 102 58 1 112 212 14 115 2.67e-19 88.6
MS.gene55258.t1 AT1G66230 41.509 106 59 2 112 215 14 118 2.80e-19 87.8
MS.gene55258.t1 AT3G53200 51.389 72 35 0 145 216 12 83 8.02e-19 84.7
MS.gene55258.t1 AT3G12820 52.941 68 32 0 145 212 2 69 1.08e-18 84.0
MS.gene55258.t1 AT4G37780 35.652 115 71 3 112 223 14 128 3.37e-18 85.1
MS.gene55258.t1 AT5G26660 47.222 72 38 0 145 216 17 88 4.12e-18 85.1
MS.gene55258.t1 AT5G49620 44.330 97 53 1 112 207 28 124 5.26e-18 84.7
MS.gene55258.t1 AT3G18100 41.053 95 56 0 112 206 546 640 5.86e-18 87.0
MS.gene55258.t1 AT5G59780 48.611 72 37 0 145 216 23 94 7.08e-18 82.4
MS.gene55258.t1 AT3G18100 41.053 95 56 0 112 206 498 592 7.71e-18 86.3
MS.gene55258.t1 AT3G46130 48.611 72 37 0 145 216 13 84 8.51e-18 82.4
MS.gene55258.t1 AT3G18100 41.489 94 55 0 112 205 385 478 8.78e-18 86.3
MS.gene55258.t1 AT2G36890 42.718 103 57 2 112 212 14 116 9.37e-18 83.6
MS.gene55258.t1 AT3G18100 41.053 95 56 0 112 206 333 427 1.18e-17 85.5
MS.gene55258.t1 AT3G46130 48.611 72 37 0 145 216 23 94 1.28e-17 82.0
MS.gene55258.t1 AT3G06490 43.878 98 52 2 112 207 21 117 1.43e-17 83.6
MS.gene55258.t1 AT2G36890 42.718 103 57 2 112 212 55 157 1.46e-17 84.0
MS.gene55258.t1 AT1G56650 36.364 121 76 1 105 224 3 123 1.77e-17 82.0
MS.gene55258.t1 AT3G62610 38.835 103 62 1 112 213 14 116 2.05e-17 83.6
MS.gene55258.t1 AT3G27810 49.315 73 36 1 145 217 7 78 2.67e-17 79.7
MS.gene55258.t1 AT5G40350 29.213 178 97 6 145 321 8 157 3.32e-17 79.3
MS.gene55258.t1 AT5G35550 43.529 85 47 1 145 228 53 137 4.45e-17 81.3
MS.gene55258.t1 AT5G62320 41.441 111 55 3 112 213 15 124 7.63e-17 80.1
MS.gene55258.t1 AT1G66390 38.182 110 67 1 105 213 3 112 1.93e-16 79.0
MS.gene55258.t1 AT3G47600 38.384 99 61 0 117 215 14 112 1.45e-15 77.8
MS.gene55258.t1 AT2G37630 35.088 114 71 1 112 222 4 117 1.76e-15 77.8
MS.gene55258.t1 AT5G49620 38.739 111 53 2 112 207 28 138 8.41e-15 75.5
MS.gene55258.t1 AT1G66380 46.377 69 37 0 145 213 11 79 1.30e-14 70.1
MS.gene55258.t1 AT5G14750 44.828 58 32 0 155 212 1 58 9.05e-14 68.6
MS.gene55258.t1 AT5G14750 44.828 58 32 0 155 212 1 58 9.05e-14 68.6
MS.gene55258.t1 AT1G71030 40.909 66 39 0 148 213 5 70 1.59e-13 68.9
MS.gene55258.t1 AT1G71030 40.909 66 39 0 148 213 19 84 1.93e-13 69.3
MS.gene55258.t1 AT1G22640 47.458 59 31 0 155 213 1 59 1.25e-12 67.0
MS.gene55258.t1 AT3G23250 44.262 61 34 0 155 215 1 61 1.26e-12 67.4
MS.gene55258.t1 AT1G09770 37.647 85 52 1 113 197 8 91 4.23e-11 65.5

Find 98 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAACTTGTTGCTCTTTA+TGG 0.055543 5.2:-31100149 MS.gene55258:CDS
ATGCAAGCACATAGAATTTA+TGG 0.155271 5.2:-31099569 MS.gene55258:CDS
CCATTCTGCTGTAAACATTT+TGG 0.171567 5.2:+31099417 None:intergenic
GTTATGTTCTTCATATCTTT+TGG 0.231970 5.2:+31100364 None:intergenic
ACAGCATTGTCTGTTCTTCC+TGG 0.232685 5.2:+31099515 None:intergenic
CATTGAAGTTAGTGTTATTA+TGG 0.235907 5.2:+31100273 None:intergenic
CCTCTTTGCCACTTCCATTA+GGG 0.244007 5.2:+31100237 None:intergenic
TGGAGGGAAAAGGTTCTTAT+TGG 0.252461 5.2:-31100328 MS.gene55258:CDS
GAAAGACACTCACTCATAAA+TGG 0.267252 5.2:+31100386 None:intergenic
CTCCATCACAAAGCTCTTAT+AGG 0.282673 5.2:+31100424 None:intergenic
AATGCCCTTCTGTTGATTCT+TGG 0.283524 5.2:+31099617 None:intergenic
CTCTTTATGGTCCTCAAAAC+TGG 0.287586 5.2:-31100136 MS.gene55258:CDS
TCCAATTTCTTCTATGCATA+TGG 0.290509 5.2:-31100531 None:intergenic
TCCTCTTTGCCACTTCCATT+AGG 0.312075 5.2:+31100236 None:intergenic
AAATCACTGGCATGTTATAA+TGG 0.323655 5.2:-31099489 MS.gene55258:CDS
AGAAGTAGCATATGGGAAAA+TGG 0.333027 5.2:+31099295 None:intergenic
CTCTCTATCAACACAAACTA+TGG 0.336963 5.2:-31100488 MS.gene55258:CDS
TGAGGAGTTTCAACAGCATC+TGG 0.344189 5.2:+31097587 None:intergenic
ACATAACATGGAGGATGATA+TGG 0.368084 5.2:-31100348 MS.gene55258:CDS
TGTTGATTCTTGGATCCAAT+TGG 0.373955 5.2:+31099627 None:intergenic
CATTCAATCAGATCAGATAC+TGG 0.376946 5.2:-31097799 MS.gene55258:CDS
AGCAACAAGTTCTTTAAGCT+TGG 0.378116 5.2:+31100157 None:intergenic
CCTGGTGGTAGGGTTGAGTA+TGG 0.380559 5.2:-31099257 MS.gene55258:CDS
GGGGCTCCATTGAGAAAATA+AGG 0.387825 5.2:+31099335 None:intergenic
CAGCATTGTCTGTTCTTCCT+GGG 0.397684 5.2:+31099516 None:intergenic
AAGTCTCTCTTCCTCTTCTT+CGG 0.405434 5.2:+31099592 None:intergenic
TATGCGAAGGCAAGAGTTGT+AGG 0.412480 5.2:-31099664 MS.gene55258:intron
TCTTTCCAACATTGTGCTCC+TGG 0.414555 5.2:-31099275 MS.gene55258:CDS
GCTAAGATGGTTCAACCAAT+TGG 0.427019 5.2:-31099642 MS.gene55258:CDS
TGTTGGAAAGAAGTAGCATA+TGG 0.427053 5.2:+31099287 None:intergenic
TGGTTCTTCCACCATGTCAT+TGG 0.430181 5.2:+31097820 None:intergenic
ATAGAATTTATGGAAACAAA+TGG 0.443806 5.2:-31099559 MS.gene55258:CDS
TCTTCTTCTCCTGTATGCAC+TGG 0.451134 5.2:+31099445 None:intergenic
GTGTCTCTGCGGCCAAAGCT+TGG 0.455340 5.2:+31099386 None:intergenic
ATGGAGCAAAATCCAAGCTT+TGG 0.457109 5.2:-31099398 MS.gene55258:CDS
GCAAGAGTTGTAGGCTAAGA+TGG 0.469016 5.2:-31099655 MS.gene55258:CDS
TTTCTCAATGGAGCCCCACT+TGG 0.471962 5.2:-31099329 MS.gene55258:CDS
AACATTGTGCTCCTGGTGGT+AGG 0.477047 5.2:-31099268 MS.gene55258:CDS
AGTGGCAAAGAGGAAGATAA+TGG 0.477427 5.2:-31100227 MS.gene55258:CDS
GATGAGTTAGAGAACCCTAA+TGG 0.489473 5.2:-31100251 MS.gene55258:CDS
TTAAGCTTGGAATCTTCAGC+AGG 0.491648 5.2:+31100170 None:intergenic
CAGTATCTGATCTGATTGAA+TGG 0.492098 5.2:+31097800 None:intergenic
GAATCTTATAGCTGAAAAGT+TGG 0.494696 5.2:-31100114 MS.gene55258:CDS
AAGAGCTTTGTGATGGAGAA+TGG 0.496350 5.2:-31100419 MS.gene55258:CDS
GAAAAGTTGGAAGGAAGATC+AGG 0.498813 5.2:-31100101 MS.gene55258:intron
GGTTCTTATTGGAGTGAGGA+AGG 0.499259 5.2:-31100317 MS.gene55258:CDS
TAGAATTTATGGAAACAAAT+GGG 0.516486 5.2:-31099558 MS.gene55258:CDS
AGCATACAAACCAACATGTA+GGG 0.516701 5.2:+31099184 None:intergenic
TGATTCTGTTTCCATTGTTG+TGG 0.518322 5.2:+31099364 None:intergenic
GTAAATGTGCAAGAGGGCAT+TGG 0.525006 5.2:-31100196 MS.gene55258:CDS
AAAAGGTTCTTATTGGAGTG+AGG 0.527759 5.2:-31100321 MS.gene55258:CDS
GAGGAGTTTCAACAGCATCT+GGG 0.530438 5.2:+31097588 None:intergenic
CCAAAATGTTTACAGCAGAA+TGG 0.535209 5.2:-31099417 MS.gene55258:CDS
GAGGATGATATGGAGGGAAA+AGG 0.539017 5.2:-31100338 MS.gene55258:CDS
GAGAACAATCCAGTGCATAC+AGG 0.549261 5.2:-31099454 MS.gene55258:CDS
AATATTGTTGAGGATAATGA+TGG 0.551677 5.2:+31097723 None:intergenic
ACACCAGAGAAGTAATCAAA+AGG 0.553846 5.2:+31099152 None:intergenic
TACCACCAGGAGCACAATGT+TGG 0.555354 5.2:+31099270 None:intergenic
GAGCATACAAACCAACATGT+AGG 0.558851 5.2:+31099183 None:intergenic
ACATTGTGCTCCTGGTGGTA+GGG 0.559580 5.2:-31099267 MS.gene55258:CDS
TTAGAGAACCCTAATGGAAG+TGG 0.562159 5.2:-31100245 MS.gene55258:CDS
TTCTCAATGGAGCCCCACTT+GGG 0.562639 5.2:-31099328 MS.gene55258:CDS
AAGGGCATTTACCGAAGAAG+AGG 0.564024 5.2:-31099603 MS.gene55258:CDS
AATGTGCAAGAGGGCATTGG+AGG 0.567448 5.2:-31100193 MS.gene55258:CDS
TGCCTATAAGAGCTTTGTGA+TGG 0.572832 5.2:-31100426 MS.gene55258:CDS
CTTATAGCTGAAAAGTTGGA+AGG 0.575448 5.2:-31100110 MS.gene55258:CDS
GTTGGAAAGAAGTAGCATAT+GGG 0.582719 5.2:+31099288 None:intergenic
CAGTCTAGTAAATGTGCAAG+AGG 0.591655 5.2:-31100203 MS.gene55258:CDS
CCCTAATGGAAGTGGCAAAG+AGG 0.591951 5.2:-31100237 MS.gene55258:CDS
AGGAGTTTCAACAGCATCTG+GGG 0.596052 5.2:+31097589 None:intergenic
TGGATCCAAGAATCAACAGA+AGG 0.596555 5.2:-31099622 MS.gene55258:CDS
TAACATGGAGGATGATATGG+AGG 0.601137 5.2:-31100345 MS.gene55258:CDS
TTCCAACATTGTGCTCCTGG+TGG 0.602452 5.2:-31099272 MS.gene55258:CDS
ATGCAAGGACCCCTACATGT+TGG 0.603281 5.2:-31099194 MS.gene55258:CDS
TGGACATACTATTCCCAAGT+GGG 0.607269 5.2:+31099315 None:intergenic
AAGATATGAAGAACATAACA+TGG 0.607365 5.2:-31100360 MS.gene55258:CDS
CCGCAGAGACACCACAACAA+TGG 0.610250 5.2:-31099375 MS.gene55258:CDS
ATGATAGCTAGACTATTCCC+AGG 0.611819 5.2:-31099533 MS.gene55258:CDS
ATCATGTAGCACCTACTCCA+AGG 0.615109 5.2:+31097552 None:intergenic
CCATACTCAACCCTACCACC+AGG 0.621029 5.2:+31099257 None:intergenic
TTTGTCATCAAATATTGTTG+AGG 0.625193 5.2:+31097713 None:intergenic
GGATCCAAGAATCAACAGAA+GGG 0.629646 5.2:-31099621 MS.gene55258:CDS
ATTCAATCAGATCAGATACT+GGG 0.636557 5.2:-31097798 MS.gene55258:CDS
GGTGAGAGAGAAGCTATGCA+AGG 0.639165 5.2:-31099209 MS.gene55258:CDS
AATCAGATCAGATACTGGGA+TGG 0.649755 5.2:-31097794 MS.gene55258:CDS
CATATGGTATATGCAGACCT+CGG 0.662674 5.2:-31100515 MS.gene55258:CDS
TCTCTCTCACCACTCATGTG+AGG 0.664807 5.2:+31099221 None:intergenic
CCATTGTTGTGGTGTCTCTG+CGG 0.666871 5.2:+31099375 None:intergenic
GCATACAAACCAACATGTAG+GGG 0.687045 5.2:+31099185 None:intergenic
GGACATACTATTCCCAAGTG+GGG 0.688122 5.2:+31099316 None:intergenic
AGTCTAGTAAATGTGCAAGA+GGG 0.697348 5.2:-31100202 MS.gene55258:CDS
AACATGGAGGATGATATGGA+GGG 0.709417 5.2:-31100344 MS.gene55258:CDS
TGTTGATAGAGAGAGATCCG+AGG 0.713854 5.2:+31100498 None:intergenic
TGGTAGAACCAATGACATGG+TGG 0.724629 5.2:-31097828 MS.gene55258:CDS
GCTCCATTGAGAAAATAAGG+TGG 0.743341 5.2:+31099338 None:intergenic
ATGGACATACTATTCCCAAG+TGG 0.743445 5.2:+31099314 None:intergenic
ATATGAAGAACATAACATGG+AGG 0.760988 5.2:-31100357 MS.gene55258:CDS
AGTTGGTAGAACCAATGACA+TGG 0.773979 5.2:-31097831 MS.gene55258:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTATAAATTTTTATTTAATG+AGG + chr5.2:31099585-31099604 None:intergenic 10.0%
!! AAATCAATTTATAAAAACCA+TGG + chr5.2:31099002-31099021 None:intergenic 15.0%
!! ACCAAATTATGTTAATTAAT+AGG + chr5.2:31100211-31100230 None:intergenic 15.0%
!! ATAGAAAATAGAAAAATGAT+AGG + chr5.2:31099982-31100001 None:intergenic 15.0%
!! TCCTATTAATTAACATAATT+TGG - chr5.2:31100207-31100226 MS.gene55258:CDS 15.0%
!!! ACAATCTATTATTTTAAGAA+GGG + chr5.2:31099562-31099581 None:intergenic 15.0%
!!! ATCATTTTTCTATTTTCTAT+AGG - chr5.2:31099982-31100001 MS.gene55258:intron 15.0%
!!! GTTCATATAGTTTTAAATTT+CGG - chr5.2:31098267-31098286 MS.gene55258:intron 15.0%
!!! GTTTTTATAAATTGATTTTG+TGG - chr5.2:31099004-31099023 MS.gene55258:intron 15.0%
!!! TAGTTTTTTTTTTAGTAAAC+CGG - chr5.2:31099153-31099172 MS.gene55258:intron 15.0%
!! ATAGAATTTATGGAAACAAA+TGG - chr5.2:31098512-31098531 MS.gene55258:intron 20.0%
!! GGTTTACTAAAAAAAAAACT+AGG + chr5.2:31099154-31099173 None:intergenic 20.0%
!! GTCTTTATATTTCAAAAGTA+TGG + chr5.2:31099689-31099708 None:intergenic 20.0%
!! TAGAATTTATGGAAACAAAT+GGG - chr5.2:31098513-31098532 MS.gene55258:intron 20.0%
!! TATGAAGAGATGTATATATT+TGG - chr5.2:31098349-31098368 MS.gene55258:intron 20.0%
!!! AATTTGGTTTAATTTGAAGT+TGG - chr5.2:31100223-31100242 MS.gene55258:CDS 20.0%
!!! AGTTTTTTTTTTAGTAAACC+GGG - chr5.2:31099154-31099173 MS.gene55258:intron 20.0%
!!! ATTTTAAACTATACTCCTTT+TGG - chr5.2:31099476-31099495 MS.gene55258:CDS 20.0%
!!! CAATCTATTATTTTAAGAAG+GGG + chr5.2:31099561-31099580 None:intergenic 20.0%
!!! GACAATCTATTATTTTAAGA+AGG + chr5.2:31099563-31099582 None:intergenic 20.0%
!!! TTTTTTTTTTTTGTATGCGA+AGG - chr5.2:31098394-31098413 MS.gene55258:intron 20.0%
! AAGATATGAAGAACATAACA+TGG - chr5.2:31097711-31097730 MS.gene55258:CDS 25.0%
! AATATTGTTGAGGATAATGA+TGG + chr5.2:31100351-31100370 None:intergenic 25.0%
! ATATGTGTGACAAATAATGA+AGG + chr5.2:31100158-31100177 None:intergenic 25.0%
! ATCATGTATGTTTGAATTGA+CGG - chr5.2:31098050-31098069 MS.gene55258:intron 25.0%
! ATTTCAAAGACCTAATATTG+TGG + chr5.2:31100056-31100075 None:intergenic 25.0%
! TAACCAAACTAATACATTGA+AGG - chr5.2:31099432-31099451 MS.gene55258:CDS 25.0%
! TATGTGTGACAAATAATGAA+GGG + chr5.2:31100157-31100176 None:intergenic 25.0%
! TTACCTTCAATGTATTAGTT+TGG + chr5.2:31099438-31099457 None:intergenic 25.0%
! TTTGTCATCAAATATTGTTG+AGG + chr5.2:31100361-31100380 None:intergenic 25.0%
!! AATGTATTAGTTTGGTTATG+TGG + chr5.2:31099430-31099449 None:intergenic 25.0%
!! ATGTATTAGTTTGGTTATGT+GGG + chr5.2:31099429-31099448 None:intergenic 25.0%
!! CATTGAAGTTAGTGTTATTA+TGG + chr5.2:31097801-31097820 None:intergenic 25.0%
!! GTCAACATACAATTTAAAGT+GGG + chr5.2:31099406-31099425 None:intergenic 25.0%
!! GTTATGTTCTTCATATCTTT+TGG + chr5.2:31097710-31097729 None:intergenic 25.0%
!! TCAACATACAATTTAAAGTG+GGG + chr5.2:31099405-31099424 None:intergenic 25.0%
!!! ATAAATTGATTTTGTGGTCA+CGG - chr5.2:31099010-31099029 MS.gene55258:intron 25.0%
!!! ATCCAGAAATTTTAACATGT+GGG + chr5.2:31099874-31099893 None:intergenic 25.0%
AAATCACTGGCATGTTATAA+TGG - chr5.2:31098582-31098601 MS.gene55258:intron 30.0%
ATATGAAGAACATAACATGG+AGG - chr5.2:31097714-31097733 MS.gene55258:CDS 30.0%
ATGCAAGCACATAGAATTTA+TGG - chr5.2:31098502-31098521 MS.gene55258:intron 30.0%
ATTCAATCAGATCAGATACT+GGG - chr5.2:31100273-31100292 MS.gene55258:CDS 30.0%
ATTGCTTGAAATAGAAAGCA+AGG + chr5.2:31099359-31099378 None:intergenic 30.0%
GAATCTTATAGCTGAAAAGT+TGG - chr5.2:31097957-31097976 MS.gene55258:intron 30.0%
GGTCAACATACAATTTAAAG+TGG + chr5.2:31099407-31099426 None:intergenic 30.0%
TATGAAGTAGCAAAAAGTGA+AGG + chr5.2:31098964-31098983 None:intergenic 30.0%
! ACGGTATGTTATTGTGATTT+TGG - chr5.2:31098085-31098104 MS.gene55258:intron 30.0%
! ATTGTTCTAAATTGCAATCG+CGG + chr5.2:31099101-31099120 None:intergenic 30.0%
! TGCTTATATTTGAGACCAAA+AGG + chr5.2:31099494-31099513 None:intergenic 30.0%
! TGTATTAGTTTGGTTATGTG+GGG + chr5.2:31099428-31099447 None:intergenic 30.0%
! TTGCTACTTCATATTCTTGT+AGG - chr5.2:31098971-31098990 MS.gene55258:intron 30.0%
!! AAAGAACTTGTTGCTCTTTA+TGG - chr5.2:31097922-31097941 MS.gene55258:intron 30.0%
!! GATCCAGAAATTTTAACATG+TGG + chr5.2:31099875-31099894 None:intergenic 30.0%
!! TCCAGAAATTTTAACATGTG+GGG + chr5.2:31099873-31099892 None:intergenic 30.0%
AAAAGGTTCTTATTGGAGTG+AGG - chr5.2:31097750-31097769 MS.gene55258:CDS 35.0%
ACAATGCTGTGAAAAATCAC+TGG - chr5.2:31098569-31098588 MS.gene55258:intron 35.0%
ACACCAGAGAAGTAATCAAA+AGG + chr5.2:31098922-31098941 None:intergenic 35.0%
ACATAACATGGAGGATGATA+TGG - chr5.2:31097723-31097742 MS.gene55258:CDS 35.0%
AGAAGTAGCATATGGGAAAA+TGG + chr5.2:31098779-31098798 None:intergenic 35.0%
AGCAACAAGTTCTTTAAGCT+TGG + chr5.2:31097917-31097936 None:intergenic 35.0%
AGCATACAAACCAACATGTA+GGG + chr5.2:31098890-31098909 None:intergenic 35.0%
AGTCTAGTAAATGTGCAAGA+GGG - chr5.2:31097869-31097888 MS.gene55258:intron 35.0%
CAACAGCGTTAAAACTCTTT+GGG + chr5.2:31099249-31099268 None:intergenic 35.0%
CAGTATCTGATCTGATTGAA+TGG + chr5.2:31100274-31100293 None:intergenic 35.0%
CATTCAATCAGATCAGATAC+TGG - chr5.2:31100272-31100291 MS.gene55258:CDS 35.0%
CCAAAATGTTTACAGCAGAA+TGG - chr5.2:31098654-31098673 MS.gene55258:intron 35.0%
CCAAGATTGTTTAGATGAGA+TGG + chr5.2:31099929-31099948 None:intergenic 35.0%
CCAAGGAAGTCAAAAAATTG+AGG + chr5.2:31100505-31100524 None:intergenic 35.0%
CCATCTCATCTAAACAATCT+TGG - chr5.2:31099926-31099945 MS.gene55258:intron 35.0%
CTCTCTATCAACACAAACTA+TGG - chr5.2:31097583-31097602 MS.gene55258:CDS 35.0%
CTTATAGCTGAAAAGTTGGA+AGG - chr5.2:31097961-31097980 MS.gene55258:intron 35.0%
GAAAGACACTCACTCATAAA+TGG + chr5.2:31097688-31097707 None:intergenic 35.0%
GTTGGAAAGAAGTAGCATAT+GGG + chr5.2:31098786-31098805 None:intergenic 35.0%
TAGATTCAAACCTAGGAACT+TGG - chr5.2:31099281-31099300 MS.gene55258:CDS 35.0%
TGAAATAGAAAGCAAGGAGT+GGG + chr5.2:31099353-31099372 None:intergenic 35.0%
TGATTCTGTTTCCATTGTTG+TGG + chr5.2:31098710-31098729 None:intergenic 35.0%
TGTTGGAAAGAAGTAGCATA+TGG + chr5.2:31098787-31098806 None:intergenic 35.0%
TTGAAATAGAAAGCAAGGAG+TGG + chr5.2:31099354-31099373 None:intergenic 35.0%
TTTGAATTGACGGTGACTTT+GGG - chr5.2:31098060-31098079 MS.gene55258:intron 35.0%
! AATGTTTTACCTCACATGAG+TGG - chr5.2:31098841-31098860 MS.gene55258:intron 35.0%
! AGGAGTATGTTGAATCAACT+AGG + chr5.2:31099962-31099981 None:intergenic 35.0%
! CCATTCTGCTGTAAACATTT+TGG + chr5.2:31098657-31098676 None:intergenic 35.0%
! GCGATTGCAATTTAGAACAA+TGG - chr5.2:31099100-31099119 MS.gene55258:intron 35.0%
! GCTATAAGATTCCAGTTTTG+AGG + chr5.2:31097949-31097968 None:intergenic 35.0%
!! CCAGAAATTTTAACATGTGG+GGG + chr5.2:31099872-31099891 None:intergenic 35.0%
!! TGTTGATTCTTGGATCCAAT+TGG + chr5.2:31098447-31098466 None:intergenic 35.0%
!!! CCTCAATTTTTTGACTTCCT+TGG - chr5.2:31100502-31100521 MS.gene55258:CDS 35.0%
!!! TCACCACCTTATTTTCTCAA+TGG - chr5.2:31098730-31098749 MS.gene55258:intron 35.0%
!!! TTTTTTGACTTCCTTGGAGT+AGG - chr5.2:31100508-31100527 MS.gene55258:CDS 35.0%
AACAAGATTGTGAGCATGCT+TGG + chr5.2:31098176-31098195 None:intergenic 40.0%
AACATGGAGGATGATATGGA+GGG - chr5.2:31097727-31097746 MS.gene55258:CDS 40.0%
AAGTCTCTCTTCCTCTTCTT+CGG + chr5.2:31098482-31098501 None:intergenic 40.0%
AATCAGATCAGATACTGGGA+TGG - chr5.2:31100277-31100296 MS.gene55258:CDS 40.0%
AGTGGCAAAGAGGAAGATAA+TGG - chr5.2:31097844-31097863 MS.gene55258:intron 40.0%
ATGATAGCTAGACTATTCCC+AGG - chr5.2:31098538-31098557 MS.gene55258:intron 40.0%
ATGGACATACTATTCCCAAG+TGG + chr5.2:31098760-31098779 None:intergenic 40.0%
ATGGAGCAAAATCCAAGCTT+TGG - chr5.2:31098673-31098692 MS.gene55258:intron 40.0%
CAGTCTAGTAAATGTGCAAG+AGG - chr5.2:31097868-31097887 MS.gene55258:intron 40.0%
CATATGGTATATGCAGACCT+CGG - chr5.2:31097556-31097575 MS.gene55258:CDS 40.0%
CCCCCACATGTTAAAATTTC+TGG - chr5.2:31099869-31099888 MS.gene55258:intron 40.0%
CTCCATCACAAAGCTCTTAT+AGG + chr5.2:31097650-31097669 None:intergenic 40.0%
CTCTTTATGGTCCTCAAAAC+TGG - chr5.2:31097935-31097954 MS.gene55258:intron 40.0%
GAAAAGTTGGAAGGAAGATC+AGG - chr5.2:31097970-31097989 MS.gene55258:intron 40.0%
GAAATAGAAAGCAAGGAGTG+GGG + chr5.2:31099352-31099371 None:intergenic 40.0%
GAGCATACAAACCAACATGT+AGG + chr5.2:31098891-31098910 None:intergenic 40.0%
GATGAGTTAGAGAACCCTAA+TGG - chr5.2:31097820-31097839 MS.gene55258:CDS 40.0%
GCAACAGCGTTAAAACTCTT+TGG + chr5.2:31099250-31099269 None:intergenic 40.0%
GCATACAAACCAACATGTAG+GGG + chr5.2:31098889-31098908 None:intergenic 40.0%
GCTAAGATGGTTCAACCAAT+TGG - chr5.2:31098429-31098448 MS.gene55258:intron 40.0%
GCTCCATTGAGAAAATAAGG+TGG + chr5.2:31098736-31098755 None:intergenic 40.0%
GGATCCAAGAATCAACAGAA+GGG - chr5.2:31098450-31098469 MS.gene55258:intron 40.0%
GTTTGAATTGACGGTGACTT+TGG - chr5.2:31098059-31098078 MS.gene55258:intron 40.0%
TAACATGGAGGATGATATGG+AGG - chr5.2:31097726-31097745 MS.gene55258:CDS 40.0%
TATTCTTGTAGGAGACACCA+TGG - chr5.2:31098982-31099001 MS.gene55258:intron 40.0%
TGGACATACTATTCCCAAGT+GGG + chr5.2:31098759-31098778 None:intergenic 40.0%
TGGAGGGAAAAGGTTCTTAT+TGG - chr5.2:31097743-31097762 MS.gene55258:CDS 40.0%
TGGATCCAAGAATCAACAGA+AGG - chr5.2:31098449-31098468 MS.gene55258:intron 40.0%
TTAAGCTTGGAATCTTCAGC+AGG + chr5.2:31097904-31097923 None:intergenic 40.0%
TTAGAGAACCCTAATGGAAG+TGG - chr5.2:31097826-31097845 MS.gene55258:CDS 40.0%
! AAAATTTCTGGATCCGTCAC+TGG - chr5.2:31099881-31099900 MS.gene55258:intron 40.0%
! AAGAGCTTTGTGATGGAGAA+TGG - chr5.2:31097652-31097671 MS.gene55258:CDS 40.0%
! ACTAATCCCTCGAGTATTGT+GGG - chr5.2:31099201-31099220 MS.gene55258:CDS 40.0%
! CTAGGTTTGAATCTAGCCTT+GGG + chr5.2:31099276-31099295 None:intergenic 40.0%
! GAGTATTGTGGGACTCAAAT+GGG - chr5.2:31099212-31099231 MS.gene55258:CDS 40.0%
! TGCCTATAAGAGCTTTGTGA+TGG - chr5.2:31097645-31097664 MS.gene55258:CDS 40.0%
!! AATGCCCTTCTGTTGATTCT+TGG + chr5.2:31098457-31098476 None:intergenic 40.0%
!! AGTTGGTAGAACCAATGACA+TGG - chr5.2:31100240-31100259 MS.gene55258:CDS 40.0%
!! CTTCTAGCTTAATCCAGTGA+CGG + chr5.2:31099897-31099916 None:intergenic 40.0%
!! GCACCTTTTGATTACTTCTC+TGG - chr5.2:31098916-31098935 MS.gene55258:intron 40.0%
ACAGCATTGTCTGTTCTTCC+TGG + chr5.2:31098559-31098578 None:intergenic 45.0%
AGGAGTTTCAACAGCATCTG+GGG + chr5.2:31100485-31100504 None:intergenic 45.0%
CAGCATTGTCTGTTCTTCCT+GGG + chr5.2:31098558-31098577 None:intergenic 45.0%
CCAAGGCTAGATTCAAACCT+AGG - chr5.2:31099274-31099293 MS.gene55258:CDS 45.0%
CCTAGGTTTGAATCTAGCCT+TGG + chr5.2:31099277-31099296 None:intergenic 45.0%
GAACTTGGTTAAGCCAGTCA+CGG - chr5.2:31099296-31099315 MS.gene55258:CDS 45.0%
GAGAACAATCCAGTGCATAC+AGG - chr5.2:31098617-31098636 MS.gene55258:intron 45.0%
GAGGAGTTTCAACAGCATCT+GGG + chr5.2:31100486-31100505 None:intergenic 45.0%
GAGGATGATATGGAGGGAAA+AGG - chr5.2:31097733-31097752 MS.gene55258:CDS 45.0%
GATGCAAGTGTACCACATTG+GGG - chr5.2:31099318-31099337 MS.gene55258:CDS 45.0%
GCAAGAGTTGTAGGCTAAGA+TGG - chr5.2:31098416-31098435 MS.gene55258:intron 45.0%
GCGATGACGACCACAATATT+AGG - chr5.2:31100043-31100062 MS.gene55258:intron 45.0%
GGACATACTATTCCCAAGTG+GGG + chr5.2:31098758-31098777 None:intergenic 45.0%
GGATGCAAGTGTACCACATT+GGG - chr5.2:31099317-31099336 MS.gene55258:CDS 45.0%
GGGGCTCCATTGAGAAAATA+AGG + chr5.2:31098739-31098758 None:intergenic 45.0%
GGTTCTTATTGGAGTGAGGA+AGG - chr5.2:31097754-31097773 MS.gene55258:CDS 45.0%
TATGCGAAGGCAAGAGTTGT+AGG - chr5.2:31098407-31098426 MS.gene55258:intron 45.0%
TCTTCTTCTCCTGTATGCAC+TGG + chr5.2:31098629-31098648 None:intergenic 45.0%
TCTTTCCAACATTGTGCTCC+TGG - chr5.2:31098796-31098815 MS.gene55258:intron 45.0%
TGAGGAGTTTCAACAGCATC+TGG + chr5.2:31100487-31100506 None:intergenic 45.0%
TGGTAGAACCAATGACATGG+TGG - chr5.2:31100243-31100262 MS.gene55258:CDS 45.0%
TGGTTCTTCCACCATGTCAT+TGG + chr5.2:31100254-31100273 None:intergenic 45.0%
TTAACGCTGTTGCATACCCA+AGG - chr5.2:31099257-31099276 MS.gene55258:CDS 45.0%
TTGAGTCCCACAATACTCGA+GGG + chr5.2:31099210-31099229 None:intergenic 45.0%
TTTGAGTCCCACAATACTCG+AGG + chr5.2:31099211-31099230 None:intergenic 45.0%
! ACTGGCTTAACCAAGTTCCT+AGG + chr5.2:31099294-31099313 None:intergenic 45.0%
! CCTCTTTGCCACTTCCATTA+GGG + chr5.2:31097837-31097856 None:intergenic 45.0%
! CGAGTATTGTGGGACTCAAA+TGG - chr5.2:31099211-31099230 MS.gene55258:CDS 45.0%
! GACTAATCCCTCGAGTATTG+TGG - chr5.2:31099200-31099219 MS.gene55258:CDS 45.0%
! GTAAATGTGCAAGAGGGCAT+TGG - chr5.2:31097875-31097894 MS.gene55258:intron 45.0%
! TCCTCTTTGCCACTTCCATT+AGG + chr5.2:31097838-31097857 None:intergenic 45.0%
! TGTTGATAGAGAGAGATCCG+AGG + chr5.2:31097576-31097595 None:intergenic 45.0%
!! AAGGGCATTTACCGAAGAAG+AGG - chr5.2:31098468-31098487 MS.gene55258:intron 45.0%
AACATTGTGCTCCTGGTGGT+AGG - chr5.2:31098803-31098822 MS.gene55258:intron 50.0%
ACATTGTGCTCCTGGTGGTA+GGG - chr5.2:31098804-31098823 MS.gene55258:intron 50.0%
ATGCAAGGACCCCTACATGT+TGG - chr5.2:31098877-31098896 MS.gene55258:intron 50.0%
CCATTGTTGTGGTGTCTCTG+CGG + chr5.2:31098699-31098718 None:intergenic 50.0%
CCCTAATGGAAGTGGCAAAG+AGG - chr5.2:31097834-31097853 MS.gene55258:intron 50.0%
CGGATGCAAGTGTACCACAT+TGG - chr5.2:31099316-31099335 MS.gene55258:CDS 50.0%
GGTGAGAGAGAAGCTATGCA+AGG - chr5.2:31098862-31098881 MS.gene55258:intron 50.0%
TCTCTCTCACCACTCATGTG+AGG + chr5.2:31098853-31098872 None:intergenic 50.0%
TTCCAACATTGTGCTCCTGG+TGG - chr5.2:31098799-31098818 MS.gene55258:intron 50.0%
TTCTCAATGGAGCCCCACTT+GGG - chr5.2:31098743-31098762 MS.gene55258:intron 50.0%
TTTCTCAATGGAGCCCCACT+TGG - chr5.2:31098742-31098761 MS.gene55258:intron 50.0%
! TACCACCAGGAGCACAATGT+TGG + chr5.2:31098804-31098823 None:intergenic 50.0%
! TTGACGGTGACTTTGGGAGA+CGG - chr5.2:31098066-31098085 MS.gene55258:intron 50.0%
!! AATGTGCAAGAGGGCATTGG+AGG - chr5.2:31097878-31097897 MS.gene55258:intron 50.0%
CCATACTCAACCCTACCACC+AGG + chr5.2:31098817-31098836 None:intergenic 55.0%
CCGCAGAGACACCACAACAA+TGG - chr5.2:31098696-31098715 MS.gene55258:intron 55.0%
CCTGGTGGTAGGGTTGAGTA+TGG - chr5.2:31098814-31098833 MS.gene55258:intron 55.0%
GGTACACTTGCATCCGTGAC+TGG + chr5.2:31099312-31099331 None:intergenic 55.0%
AATTGCGCGCAGAGGATGCC+CGG + chr5.2:31099175-31099194 None:intergenic 60.0%
GGGGTCAAGTGACCCCAATG+TGG + chr5.2:31099333-31099352 None:intergenic 60.0%
GTCTCTGCAATTGCGCGCAG+AGG + chr5.2:31099183-31099202 None:intergenic 60.0%
GTGTCTCTGCGGCCAAAGCT+TGG + chr5.2:31098688-31098707 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 31097553 31100540 31097553 ID=MS.gene55258
chr5.2 mRNA 31097553 31100540 31097553 ID=MS.gene55258.t1;Parent=MS.gene55258
chr5.2 exon 31100102 31100540 31100102 ID=MS.gene55258.t1.exon1;Parent=MS.gene55258.t1
chr5.2 CDS 31100102 31100540 31100102 ID=cds.MS.gene55258.t1;Parent=MS.gene55258.t1
chr5.2 exon 31099156 31099677 31099156 ID=MS.gene55258.t1.exon2;Parent=MS.gene55258.t1
chr5.2 CDS 31099156 31099677 31099156 ID=cds.MS.gene55258.t1;Parent=MS.gene55258.t1
chr5.2 exon 31097553 31097851 31097553 ID=MS.gene55258.t1.exon3;Parent=MS.gene55258.t1
chr5.2 CDS 31097553 31097851 31097553 ID=cds.MS.gene55258.t1;Parent=MS.gene55258.t1
Gene Sequence

>MS.gene55258

ATGCATATGGTATATGCAGACCTCGGATCTCTCTCTATCAACACAAACTATGGTGTTGTTTCAAGTTTAGACAAAGAGAGTAAAAATAGCTATGCCTATAAGAGCTTTGTGATGGAGAATGGTAGCGTCTTTCCATTTATGAGTGAGTGTCTTTCCAAAAGATATGAAGAACATAACATGGAGGATGATATGGAGGGAAAAGGTTCTTATTGGAGTGAGGAAGGTGAAAACAGTGAGAAAATAAACCATAATAACACTAACTTCAATGATGAGTTAGAGAACCCTAATGGAAGTGGCAAAGAGGAAGATAATGGACAGTCTAGTAAATGTGCAAGAGGGCATTGGAGGCCTGCTGAAGATTCCAAGCTTAAAGAACTTGTTGCTCTTTATGGTCCTCAAAACTGGAATCTTATAGCTGAAAAGTTGGAAGGAAGATCAGGTCTTGAAAAAAAACTATTATCATGTGTAATTAATAATTGATATATAAATATTTTTATATCATGTATGTTTGAATTGACGGTGACTTTGGGAGACGGTATGTTATTGTGATTTTGGCACGAGCTATACTTTTAAGCTTCAACAAAATCACGATGTGACTGTGATTTTGTCAAACTCTGATTCCAAGCATGCTCACAATCTTGTTTCTTGATATATACATGATACGTCTTGAAAAACTAAATTTTTTTTTTCTTTCTGTTTTCTCATTTAGTATGTGTTCATATAGTTTTAAATTTCGGTTGCAAAAATTGTTATATTGCAGCAATAATTACAATTTAAAACTATGCGTATAAAAACTTATGAAGAGATGTATATATTTGGATTTTAGAACTTTCTTTTTAATTTTTTTTTTTTTGTATGCGAAGGCAAGAGTTGTAGGCTAAGATGGTTCAACCAATTGGATCCAAGAATCAACAGAAGGGCATTTACCGAAGAAGAGGAAGAGAGACTTATGCAAGCACATAGAATTTATGGAAACAAATGGGCAATGATAGCTAGACTATTCCCAGGAAGAACAGACAATGCTGTGAAAAATCACTGGCATGTTATAATGGCAAGAAAGTACAGAGAACAATCCAGTGCATACAGGAGAAGAAGATTGAGCCAAAATGTTTACAGCAGAATGGAGCAAAATCCAAGCTTTGGCCGCAGAGACACCACAACAATGGAAACAGAATCATCACCACCTTATTTTCTCAATGGAGCCCCACTTGGGAATAGTATGTCCATTTTCCCATATGCTACTTCTTTCCAACATTGTGCTCCTGGTGGTAGGGTTGAGTATGGTTTAAATGTTTTACCTCACATGAGTGGTGAGAGAGAAGCTATGCAAGGACCCCTACATGTTGGTTTGTATGCTCAACAAGCACCTTTTGATTACTTCTCTGGTGTGTCTCATTTCTCTCTAAATCCTTCACTTTTTGCTACTTCATATTCTTGTAGGAGACACCATGGTTTTTATAAATTGATTTTGTGGTCACGGTTGTTGTTATGCTGCGTATTCTTTATAAGTGCATTACAATATTTATGTTCGCAACATAACTTCAACCGCGATTGCAATTTAGAACAATGGAATTTATCGAGTAGACTAGAGAAGAAAACCTAGTTTTTTTTTTAGTAAACCGGGCATCCTCTGCGCGCAATTGCAGAGACTAATCCCTCGAGTATTGTGGGACTCAAATGGGCAGCAAACTCTCCCAAAGAGTTTTAACGCTGTTGCATACCCAAGGCTAGATTCAAACCTAGGAACTTGGTTAAGCCAGTCACGGATGCAAGTGTACCACATTGGGGTCACTTGACCCCACTCCTTGCTTTCTATTTCAAGCAATTATAGCATGATTTTGCATTTTGTCCCCACTTTAAATTGTATGTTGACCCCACATAACCAAACTAATACATTGAAGGTAAAACAATGTTTGTAAATTAATTTTAAACTATACTCCTTTTGGTCTCAAATATAAGCAATTTTTTTATATTATTTGTTAAATCTTTGATATTTTAGTTATCTCCCCTTCTTAAAATAATAGATTGTCCTCATTAAATAAAAATTTATACTATAAAAAGAGTATTTTTTTCATGAGTTTTATAAAATCAAATGTGTAAATGCATTTGAGATGAAATTTTAAATGATTTTTACCATACTTTTGAAATATAAAGACATGTAAATAACAATTTTAATTTGTAGATGTTAATGAGTTTTTAATTTTTTCAATATATAACAATACAATGTTTATAATGTCAAGTATTTTACTCAATGATAATAATGTTACTAATTTATTGCTAAAAATTTTGTATAACTATTTATCATATAAAATCTTGCCCCCACATGTTAAAATTTCTGGATCCGTCACTGGATTAAGCTAGAAGAAACTTGTTCCATCTCATCTAAACAATCTTGGTAGACGAAAACCTAGTTGATTCAACATACTCCTATCATTTTTCTATTTTCTATAGGAGAATCAAGTTAAAAATATTTTTTCATAGTTTTAAATTGCGATGACGACCACAATATTAGGTCTTTGAAATCTCTGCAACAACATAAAAATTGACAGCATAATTATAACTGCTTGATTAGTAACAATCACTAATGTAATGTAAATATAACCCTTCATTATTTGTCACACATATGCTATAAGCATGTTCTTTTGTAGTTTCACTCCTATTAATTAACATAATTTGGTTTAATTTGAAGTTGGTAGAACCAATGACATGGTGGAAGAACCATTCAATCAGATCAGATACTGGGATGGCACTAATGATGAATATCAACAACAACAACAACAACTATCTAGTGTCTACCATCATTATCCTCAACAATATTTGATGACAAAGCAAAATCAAAACAATCACAATTTTCACATTTTCTCAAATTCATCAGCATCAGCAACAAATCATAATGCAGAAAACAGTGAAAAAGTTCTGATTGATGACACCCCAGATGCTGTTGAAACTCCTCAATTTTTTGACTTCCTTGGAGTAGGTGCTACATGA
Protein sequence

>MS.gene55258.t1

MHMVYADLGSLSINTNYGVVSSLDKESKNSYAYKSFVMENGSVFPFMSECLSKRYEEHNMEDDMEGKGSYWSEEGENSEKINHNNTNFNDELENPNGSGKEEDNGQSSKCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLSQNVYSRMEQNPSFGRRDTTTMETESSPPYFLNGAPLGNSMSIFPYATSFQHCAPGGRVEYGLNVLPHMSGEREAMQGPLHVGLYAQQAPFDYFSVGRTNDMVEEPFNQIRYWDGTNDEYQQQQQQLSSVYHHYPQQYLMTKQNQNNHNFHIFSNSSASATNHNAENSEKVLIDDTPDAVETPQFFDFLGVGAT