AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55387

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55387.t1 MTR_5g043880 93.902 164 10 0 1 164 115 278 4.46e-115 327
MS.gene55387.t1 MTR_1g086790 44.253 174 78 3 1 156 149 321 3.90e-38 132
MS.gene55387.t1 MTR_4g094588 48.851 174 74 5 1 163 169 338 4.86e-37 130
MS.gene55387.t1 MTR_5g091390 82.090 67 12 0 1 67 148 214 2.20e-36 127
MS.gene55387.t1 MTR_7g109800 47.126 174 56 6 1 156 136 291 5.48e-36 126
MS.gene55387.t1 MTR_2g033820 81.818 66 12 0 1 66 194 259 8.22e-34 122
MS.gene55387.t1 MTR_4g122530 62.500 88 30 1 2 86 200 287 4.71e-31 115
MS.gene55387.t1 MTR_3g095080 70.769 65 19 0 2 66 160 224 8.04e-28 103
MS.gene55387.t1 MTR_3g095080 70.769 65 19 0 2 66 136 200 9.43e-28 103
MS.gene55387.t1 MTR_7g028415 67.692 65 21 0 2 66 85 149 2.05e-27 101
MS.gene55387.t1 MTR_7g028710 67.692 65 21 0 2 66 85 149 2.05e-27 101
MS.gene55387.t1 MTR_8g092140 69.841 63 19 0 4 66 154 216 5.34e-27 101
MS.gene55387.t1 MTR_8g007270 70.769 65 19 0 2 66 146 210 3.37e-26 99.4
MS.gene55387.t1 MTR_3g104750 67.692 65 21 0 2 66 96 160 5.51e-26 97.4
MS.gene55387.t1 MTR_7g079010 67.692 65 21 0 2 66 133 197 1.13e-25 97.8
MS.gene55387.t1 MTR_7g011820 52.000 100 42 2 2 101 402 495 2.96e-25 100
MS.gene55387.t1 MTR_7g011820 58.621 58 23 1 10 67 228 284 3.42e-16 75.1
MS.gene55387.t1 MTR_5g042920 66.154 65 22 0 2 66 312 376 1.31e-24 98.6
MS.gene55387.t1 MTR_5g042920 59.649 57 22 1 10 66 151 206 4.54e-16 74.7
MS.gene55387.t1 MTR_7g062220 39.873 158 78 4 10 158 124 273 2.33e-24 96.7
MS.gene55387.t1 MTR_1g015140 64.615 65 23 0 2 66 94 158 3.30e-24 92.8
MS.gene55387.t1 MTR_5g094430 64.615 65 23 0 2 66 222 286 3.60e-24 97.4
MS.gene55387.t1 MTR_5g094430 62.500 56 20 1 11 66 67 121 6.26e-16 74.3
MS.gene55387.t1 MTR_3g009470 67.692 65 21 0 2 66 487 551 3.62e-24 98.2
MS.gene55387.t1 MTR_3g009470 64.912 57 19 1 10 66 280 335 2.08e-18 81.6
MS.gene55387.t1 MTR_3g056100 66.154 65 22 0 2 66 407 471 3.76e-24 98.2
MS.gene55387.t1 MTR_3g056100 59.649 57 22 1 10 66 243 298 9.62e-16 73.9
MS.gene55387.t1 MTR_5g094430 64.615 65 23 0 2 66 356 420 3.84e-24 97.8
MS.gene55387.t1 MTR_5g094430 62.500 56 20 1 11 66 201 255 5.88e-16 74.7
MS.gene55387.t1 MTR_3g056100 66.154 65 22 0 2 66 394 458 3.89e-24 97.8
MS.gene55387.t1 MTR_3g056100 59.649 57 22 1 10 66 243 298 1.04e-15 73.9
MS.gene55387.t1 MTR_5g094430 64.615 65 23 0 2 66 244 308 4.28e-24 97.4
MS.gene55387.t1 MTR_5g094430 62.500 56 20 1 11 66 89 143 5.90e-16 74.3
MS.gene55387.t1 MTR_3g056100 66.154 65 22 0 2 66 250 314 4.33e-24 97.4
MS.gene55387.t1 MTR_3g056100 59.649 57 22 1 10 66 99 154 1.34e-15 73.6
MS.gene55387.t1 MTR_3g056100 66.154 65 22 0 2 66 263 327 4.69e-24 97.4
MS.gene55387.t1 MTR_3g056100 59.649 57 22 1 10 66 99 154 1.34e-15 73.6
MS.gene55387.t1 MTR_4g082580 64.615 65 23 0 2 66 270 334 1.17e-23 95.5
MS.gene55387.t1 MTR_4g082580 44.872 78 40 1 10 87 145 219 2.67e-16 75.1
MS.gene55387.t1 MTR_3g095040 55.224 67 30 0 2 68 110 176 1.45e-23 92.0
MS.gene55387.t1 MTR_8g096730 55.385 65 29 0 2 66 62 126 3.48e-23 89.7
MS.gene55387.t1 MTR_3g031220 63.077 65 24 0 2 66 357 421 1.82e-22 93.2
MS.gene55387.t1 MTR_3g031220 56.140 57 24 1 10 66 198 253 1.55e-13 67.4
MS.gene55387.t1 MTR_8g092010 56.923 65 28 0 2 66 100 164 1.27e-21 86.7
MS.gene55387.t1 MTR_7g080000 58.462 65 27 0 2 66 424 488 1.99e-21 90.5
MS.gene55387.t1 MTR_7g080000 53.623 69 31 1 9 77 233 300 7.51e-18 80.1
MS.gene55387.t1 MTR_4g013260 63.077 65 24 0 2 66 328 392 2.07e-21 90.1
MS.gene55387.t1 MTR_4g013260 59.649 57 23 0 10 66 184 240 1.48e-17 79.0
MS.gene55387.t1 MTR_5g074400 61.538 65 25 0 2 66 412 476 2.41e-21 90.1
MS.gene55387.t1 MTR_5g074400 57.895 57 23 1 10 66 243 298 6.35e-14 68.6
MS.gene55387.t1 MTR_7g080020 59.375 64 26 0 3 66 486 549 2.72e-21 90.1
MS.gene55387.t1 MTR_7g080020 64.912 57 19 1 10 66 280 335 2.35e-18 81.6
MS.gene55387.t1 MTR_1g077780 48.837 86 43 1 1 85 53 138 5.46e-21 84.0
MS.gene55387.t1 MTR_7g100510 57.971 69 27 1 1 67 350 418 9.99e-21 87.8
MS.gene55387.t1 MTR_7g100510 60.714 56 21 1 11 66 190 244 1.36e-15 73.6
MS.gene55387.t1 MTR_5g097490 61.538 65 25 0 2 66 244 308 2.11e-20 86.7
MS.gene55387.t1 MTR_5g097490 54.386 57 25 1 10 66 92 147 9.64e-13 65.1
MS.gene55387.t1 MTR_7g071120 59.091 66 27 0 1 66 315 380 6.71e-20 85.9
MS.gene55387.t1 MTR_7g071120 59.649 57 22 1 10 66 166 221 1.32e-15 73.6
MS.gene55387.t1 MTR_6g086555 52.239 67 28 2 7 72 203 266 1.88e-18 81.3
MS.gene55387.t1 MTR_2g105060 52.542 59 27 1 9 66 93 151 2.44e-18 79.3
MS.gene55387.t1 MTR_3g009470 64.912 57 19 1 10 66 280 335 2.86e-18 81.3
MS.gene55387.t1 MTR_2g105060 52.542 59 27 1 9 66 168 226 3.56e-18 79.7
MS.gene55387.t1 MTR_2g088000 55.385 65 28 1 3 66 342 406 5.36e-18 80.5
MS.gene55387.t1 MTR_1g013760 53.333 60 27 1 8 66 138 197 7.37e-18 78.6
MS.gene55387.t1 MTR_3g053330 52.308 65 30 1 3 66 244 308 1.11e-17 79.3
MS.gene55387.t1 MTR_4g132430 53.846 65 29 1 3 66 120 184 2.19e-17 78.2
MS.gene55387.t1 MTR_7g110720 55.385 65 28 1 3 66 182 246 2.28e-17 78.2
MS.gene55387.t1 MTR_7g110720 55.385 65 28 1 3 66 209 273 2.47e-17 78.2
MS.gene55387.t1 MTR_2g016770 52.308 65 29 2 11 74 36 99 2.70e-17 75.9
MS.gene55387.t1 MTR_2g016770 52.308 65 29 2 11 74 28 91 2.87e-17 75.9
MS.gene55387.t1 MTR_2g023930 53.846 65 29 1 3 66 298 362 3.12e-17 78.2
MS.gene55387.t1 MTR_4g132430 53.846 65 29 1 3 66 254 318 6.06e-17 77.4
MS.gene55387.t1 MTR_1g078260 49.275 69 34 1 2 69 239 307 7.37e-17 77.0
MS.gene55387.t1 MTR_3g106060 50.000 60 29 1 8 66 136 195 8.01e-17 75.9
MS.gene55387.t1 MTR_8g098945 54.237 59 26 1 9 66 128 186 1.08e-16 75.5
MS.gene55387.t1 MTR_5g067680 52.174 69 29 2 10 74 202 270 1.52e-16 75.9
MS.gene55387.t1 MTR_1g009613 54.386 57 25 1 11 66 263 319 1.57e-16 75.5
MS.gene55387.t1 MTR_4g127040 44.595 74 40 1 7 79 242 315 3.00e-16 74.7
MS.gene55387.t1 MTR_4g130900 56.897 58 25 0 11 68 360 417 5.35e-16 74.7
MS.gene55387.t1 MTR_8g087000 33.333 144 87 3 11 148 77 217 5.61e-16 72.8
MS.gene55387.t1 MTR_8g028565 54.386 57 25 1 11 66 156 212 5.85e-16 73.9
MS.gene55387.t1 MTR_8g087000 33.333 144 87 3 11 148 78 218 5.86e-16 72.8
MS.gene55387.t1 MTR_2g083870 50.769 65 30 2 11 74 81 144 1.29e-15 72.4
MS.gene55387.t1 MTR_2g032030 52.632 57 26 1 11 66 268 324 1.38e-15 73.2
MS.gene55387.t1 MTR_2g032030 52.632 57 26 1 11 66 268 324 1.57e-15 73.2
MS.gene55387.t1 MTR_3g108960 50.794 63 30 1 6 67 310 372 2.29e-15 72.8
MS.gene55387.t1 MTR_4g107970 55.932 59 25 1 9 66 177 235 2.37e-15 72.8
MS.gene55387.t1 MTR_4g107970 55.932 59 25 1 9 66 254 312 2.90e-15 72.4
MS.gene55387.t1 MTR_2g045360 41.758 91 47 3 3 90 204 291 3.23e-15 72.4
MS.gene55387.t1 MTR_0117s0040 50.820 61 29 1 11 70 75 135 3.35e-15 70.9
MS.gene55387.t1 MTR_7g117200 50.000 68 30 2 9 72 117 184 3.40e-15 71.6
MS.gene55387.t1 MTR_8g099350 56.897 58 22 1 10 64 132 189 4.45e-15 71.6
MS.gene55387.t1 MTR_5g016610 45.205 73 38 2 11 82 200 271 5.00e-15 70.9
MS.gene55387.t1 MTR_4g007060 47.458 59 30 1 9 66 127 185 6.49e-15 70.5
MS.gene55387.t1 MTR_7g079040 54.386 57 25 1 11 66 155 211 6.56e-15 70.9
MS.gene55387.t1 MTR_1g013790 45.763 59 31 1 9 66 100 158 6.84e-15 70.1
MS.gene55387.t1 MTR_4g049790 50.769 65 31 1 3 66 305 369 7.11e-15 71.2
MS.gene55387.t1 MTR_3g090860 54.237 59 24 1 9 64 132 190 7.90e-15 70.9
MS.gene55387.t1 MTR_7g009730 54.237 59 26 1 9 66 218 276 8.36e-15 71.2
MS.gene55387.t1 MTR_4g007060 47.458 59 30 1 9 66 161 219 8.68e-15 70.5
MS.gene55387.t1 MTR_4g094908 43.056 72 40 1 11 81 267 338 1.73e-14 69.7
MS.gene55387.t1 MTR_4g094412 52.381 63 29 1 5 66 229 291 1.73e-14 70.1
MS.gene55387.t1 MTR_1g070455 50.000 60 29 1 11 69 294 353 1.84e-14 70.1
MS.gene55387.t1 MTR_4g094412 52.381 63 29 1 5 66 238 300 2.07e-14 70.1
MS.gene55387.t1 MTR_1g099600 50.794 63 29 2 6 66 180 242 3.01e-14 68.9
MS.gene55387.t1 MTR_7g109600 52.632 57 26 1 11 66 54 110 3.27e-14 68.6
MS.gene55387.t1 MTR_5g097500 50.769 65 32 0 2 66 222 286 4.36e-14 68.6
MS.gene55387.t1 MTR_4g049760 49.231 65 32 1 3 66 283 347 5.81e-14 68.9
MS.gene55387.t1 MTR_2g075750 49.153 59 27 1 9 64 27 85 6.60e-14 66.2
MS.gene55387.t1 MTR_2g075610 49.153 59 27 1 9 64 28 86 7.02e-14 66.2
MS.gene55387.t1 MTR_7g073430 51.724 58 25 1 10 64 122 179 9.66e-14 67.4
MS.gene55387.t1 MTR_3g031220 56.140 57 24 1 10 66 198 253 1.19e-13 67.8
MS.gene55387.t1 MTR_5g067700 35.185 108 55 5 11 107 107 210 1.83e-13 65.9
MS.gene55387.t1 MTR_7g073380 43.421 76 37 2 9 81 122 194 2.12e-13 66.6
MS.gene55387.t1 MTR_8g027860 49.153 59 27 1 9 64 135 193 4.56e-13 65.9
MS.gene55387.t1 MTR_2g075700 38.043 92 48 3 9 92 143 233 7.25e-13 65.1
MS.gene55387.t1 MTR_2g024380 42.029 69 39 1 10 77 251 319 1.81e-12 64.3
MS.gene55387.t1 MTR_8g032510 41.111 90 43 4 10 92 119 205 2.41e-12 63.5
MS.gene55387.t1 MTR_5g029850 96.154 26 1 0 1 26 42 67 4.68e-12 58.9
MS.gene55387.t1 MTR_2g024350 48.276 58 29 1 10 66 8 65 5.96e-12 61.6
MS.gene55387.t1 MTR_8g005750 36.697 109 50 5 10 115 103 195 7.46e-12 62.0
MS.gene55387.t1 MTR_3g093830 37.209 86 50 2 11 92 128 213 8.03e-12 62.4
MS.gene55387.t1 MTR_2g075680 40.506 79 41 2 9 84 147 222 1.07e-11 62.0
MS.gene55387.t1 MTR_0002s1250 28.947 152 83 5 10 150 111 248 1.30e-11 61.2
MS.gene55387.t1 MTR_8g069935 39.706 68 40 1 10 76 331 398 1.80e-11 61.6
MS.gene55387.t1 MTR_8g067635 42.029 69 39 1 10 77 349 417 1.95e-11 61.6
MS.gene55387.t1 MTR_5g074200 49.123 57 28 1 10 66 220 275 2.01e-11 61.2
MS.gene55387.t1 MTR_5g073620 27.481 131 69 3 10 133 672 783 6.09e-11 60.1
MS.gene55387.t1 MTR_8g067650 42.029 69 39 1 10 77 339 407 9.57e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55387.t1 AT1G69310 53.165 158 65 1 1 158 138 286 4.56e-49 160
MS.gene55387.t1 AT1G69310 53.165 158 65 1 1 158 138 286 4.56e-49 160
MS.gene55387.t1 AT1G69310 53.165 158 65 1 1 158 138 286 4.56e-49 160
MS.gene55387.t1 AT1G69310 51.852 162 57 4 1 158 138 282 2.27e-43 145
MS.gene55387.t1 AT4G18170 86.364 66 9 0 1 66 163 228 2.69e-36 127
MS.gene55387.t1 AT5G46350 83.333 66 11 0 1 66 174 239 1.45e-35 126
MS.gene55387.t1 AT1G29860 83.333 66 11 0 1 66 127 192 1.69e-35 125
MS.gene55387.t1 AT2G47260 83.333 66 11 0 1 66 165 230 6.48e-35 124
MS.gene55387.t1 AT5G49520 55.340 103 39 1 1 96 212 314 5.21e-32 118
MS.gene55387.t1 AT3G62340 72.727 66 18 0 1 66 109 174 2.96e-29 108
MS.gene55387.t1 AT4G39410 55.789 95 37 1 2 96 215 304 8.59e-29 108
MS.gene55387.t1 AT2G44745 72.308 65 18 0 2 66 137 201 4.65e-27 101
MS.gene55387.t1 AT5G13080 67.692 65 21 0 2 66 59 123 8.50e-27 99.0
MS.gene55387.t1 AT2G46130 66.154 65 22 0 2 66 22 86 1.62e-25 94.4
MS.gene55387.t1 AT1G64000 64.615 65 23 0 2 66 106 170 1.63e-25 97.1
MS.gene55387.t1 AT5G26170 60.294 68 27 0 2 69 105 172 1.70e-25 96.3
MS.gene55387.t1 AT3G01970 64.615 65 23 0 2 66 57 121 2.44e-25 95.1
MS.gene55387.t1 AT5G41570 63.077 65 24 0 2 66 90 154 2.28e-24 93.6
MS.gene55387.t1 AT1G13960 64.615 65 23 0 2 66 401 465 3.48e-24 98.2
MS.gene55387.t1 AT1G13960 62.069 58 21 1 10 67 229 285 6.24e-18 80.1
MS.gene55387.t1 AT3G01080 67.692 65 21 0 2 66 336 400 3.73e-24 97.8
MS.gene55387.t1 AT3G01080 57.895 57 23 1 10 66 205 260 8.20e-16 73.9
MS.gene55387.t1 AT1G13960 63.636 66 24 0 1 66 247 312 4.83e-24 96.3
MS.gene55387.t1 AT1G13960 63.158 57 20 1 10 66 76 131 1.40e-17 78.6
MS.gene55387.t1 AT3G01080 67.692 65 21 0 2 66 298 362 6.38e-24 96.7
MS.gene55387.t1 AT3G01080 57.895 57 23 1 10 66 167 222 1.24e-15 73.6
MS.gene55387.t1 AT2G03340 64.615 65 23 0 2 66 407 471 7.04e-24 97.1
MS.gene55387.t1 AT2G03340 61.404 57 21 1 10 66 250 305 8.15e-17 77.0
MS.gene55387.t1 AT5G07100 57.895 76 31 1 2 77 133 207 8.22e-24 93.2
MS.gene55387.t1 AT5G07100 42.500 80 42 1 10 85 24 103 3.23e-13 65.1
MS.gene55387.t1 AT5G07100 57.895 76 31 1 2 77 133 207 8.22e-24 93.2
MS.gene55387.t1 AT5G07100 42.500 80 42 1 10 85 24 103 3.23e-13 65.1
MS.gene55387.t1 AT5G07100 57.895 76 31 1 2 77 133 207 8.22e-24 93.2
MS.gene55387.t1 AT5G07100 42.500 80 42 1 10 85 24 103 3.23e-13 65.1
MS.gene55387.t1 AT5G07100 57.895 76 31 1 2 77 133 207 8.22e-24 93.2
MS.gene55387.t1 AT5G07100 42.500 80 42 1 10 85 24 103 3.23e-13 65.1
MS.gene55387.t1 AT5G07100 57.895 76 31 1 2 77 226 300 9.50e-24 94.7
MS.gene55387.t1 AT5G07100 42.500 80 42 1 10 85 117 196 3.42e-13 66.2
MS.gene55387.t1 AT2G37260 58.824 68 28 0 5 72 264 331 1.63e-23 94.7
MS.gene55387.t1 AT2G37260 53.333 75 32 2 11 83 86 159 1.46e-15 73.2
MS.gene55387.t1 AT2G37260 58.824 68 28 0 5 72 262 329 1.72e-23 94.7
MS.gene55387.t1 AT2G37260 53.333 75 32 2 11 83 84 157 1.59e-15 72.8
MS.gene55387.t1 AT2G37260 58.824 68 28 0 5 72 344 411 2.57e-23 95.1
MS.gene55387.t1 AT2G37260 53.333 75 32 2 11 83 166 239 1.41e-15 73.6
MS.gene55387.t1 AT5G64810 52.941 68 32 0 2 69 102 169 1.12e-22 89.7
MS.gene55387.t1 AT4G26640 63.636 66 24 0 1 66 196 261 1.90e-22 92.4
MS.gene55387.t1 AT4G26640 61.404 57 21 1 10 66 35 90 4.96e-16 74.3
MS.gene55387.t1 AT4G26640 63.636 66 24 0 1 66 196 261 1.90e-22 92.4
MS.gene55387.t1 AT4G26640 61.404 57 21 1 10 66 35 90 4.96e-16 74.3
MS.gene55387.t1 AT4G26640 63.636 66 24 0 1 66 196 261 1.90e-22 92.4
MS.gene55387.t1 AT4G26640 61.404 57 21 1 10 66 35 90 4.96e-16 74.3
MS.gene55387.t1 AT4G26640 63.636 66 24 0 1 66 196 261 1.90e-22 92.4
MS.gene55387.t1 AT4G26640 61.404 57 21 1 10 66 35 90 4.96e-16 74.3
MS.gene55387.t1 AT4G26640 63.636 66 24 0 1 66 332 397 2.05e-22 93.2
MS.gene55387.t1 AT4G26640 61.404 57 21 1 10 66 171 226 4.55e-16 74.7
MS.gene55387.t1 AT4G26640 63.636 66 24 0 1 66 300 365 2.36e-22 92.8
MS.gene55387.t1 AT4G26640 61.404 57 21 1 10 66 139 194 4.80e-16 74.7
MS.gene55387.t1 AT4G26640 63.636 66 24 0 1 66 372 437 2.39e-22 92.8
MS.gene55387.t1 AT4G26640 61.404 57 21 1 10 66 211 266 4.78e-16 74.7
MS.gene55387.t1 AT5G56270 64.615 65 23 0 2 66 479 543 4.82e-22 92.0
MS.gene55387.t1 AT5G56270 63.158 57 20 1 10 66 273 328 2.42e-17 78.6
MS.gene55387.t1 AT2G04880 48.837 86 41 1 2 87 275 357 1.07e-21 90.9
MS.gene55387.t1 AT2G04880 56.897 58 24 1 9 66 110 166 9.93e-15 70.9
MS.gene55387.t1 AT2G04880 48.837 86 41 1 2 87 299 381 1.23e-21 90.9
MS.gene55387.t1 AT2G04880 56.897 58 24 1 9 66 110 166 1.00e-14 70.9
MS.gene55387.t1 AT5G43290 32.716 162 84 3 10 158 114 263 2.36e-21 87.8
MS.gene55387.t1 AT2G38470 60.606 66 26 0 1 66 353 418 7.36e-21 88.6
MS.gene55387.t1 AT2G38470 59.649 57 22 1 10 66 184 239 2.41e-14 70.1
MS.gene55387.t1 AT4G26440 60.000 65 26 0 2 66 364 428 9.60e-21 88.2
MS.gene55387.t1 AT4G26440 59.649 57 22 1 10 66 178 233 3.96e-16 75.1
MS.gene55387.t1 AT2G30250 61.538 65 25 0 2 66 320 384 1.13e-20 87.4
MS.gene55387.t1 AT2G30250 53.571 56 25 1 11 66 167 221 6.21e-11 60.1
MS.gene55387.t1 AT2G46130 60.000 65 22 1 2 66 22 82 5.44e-20 80.1
MS.gene55387.t1 AT1G55600 56.250 64 28 0 3 66 300 363 8.64e-20 85.5
MS.gene55387.t1 AT2G21900 50.000 68 31 1 2 66 98 165 2.06e-19 81.3
MS.gene55387.t1 AT2G25000 54.237 59 26 1 9 66 102 160 4.71e-18 78.2
MS.gene55387.t1 AT2G25000 54.237 59 26 1 9 66 102 160 4.71e-18 78.2
MS.gene55387.t1 AT2G25000 54.237 59 26 1 9 66 124 182 6.60e-18 78.2
MS.gene55387.t1 AT2G25000 54.237 59 26 1 9 66 145 203 1.06e-17 78.2
MS.gene55387.t1 AT4G04450 56.923 65 27 1 3 66 191 255 1.14e-17 79.3
MS.gene55387.t1 AT4G04450 56.923 65 27 1 3 66 285 349 2.46e-17 78.6
MS.gene55387.t1 AT4G31800 50.847 59 28 1 9 66 110 168 2.46e-17 76.6
MS.gene55387.t1 AT4G31800 50.847 59 28 1 9 66 175 233 4.18e-17 77.0
MS.gene55387.t1 AT5G52830 57.895 57 23 1 11 66 166 222 8.45e-17 76.6
MS.gene55387.t1 AT4G22070 53.030 66 30 1 2 66 289 354 9.84e-17 76.6
MS.gene55387.t1 AT4G22070 53.030 66 30 1 2 66 289 354 9.84e-17 76.6
MS.gene55387.t1 AT4G22070 53.030 66 30 1 2 66 289 354 9.84e-17 76.6
MS.gene55387.t1 AT4G22070 53.030 66 30 1 2 66 289 354 9.84e-17 76.6
MS.gene55387.t1 AT1G62300 53.846 65 29 1 3 66 305 369 1.52e-16 76.3
MS.gene55387.t1 AT1G80840 49.153 59 29 1 9 66 145 203 2.13e-16 75.1
MS.gene55387.t1 AT1G29280 52.632 57 26 1 11 66 75 131 2.24e-16 74.3
MS.gene55387.t1 AT3G01080 57.895 57 23 1 10 66 205 260 3.34e-16 74.7
MS.gene55387.t1 AT1G30650 54.386 57 25 1 11 66 218 274 4.96e-16 74.7
MS.gene55387.t1 AT4G30935 46.250 80 42 1 11 90 332 410 7.34e-16 74.3
MS.gene55387.t1 AT5G45050 54.386 57 25 1 11 66 1042 1098 1.16e-15 73.9
MS.gene55387.t1 AT5G45050 54.386 57 25 1 11 66 1181 1237 1.18e-15 73.9
MS.gene55387.t1 AT5G45050 54.386 57 25 1 11 66 1153 1209 1.37e-15 73.6
MS.gene55387.t1 AT2G34830 52.632 57 26 1 11 66 216 272 1.57e-15 73.2
MS.gene55387.t1 AT2G34830 52.632 57 26 1 11 66 225 281 1.75e-15 73.2
MS.gene55387.t1 AT4G01720 52.308 65 30 1 3 66 232 296 2.11e-15 72.8
MS.gene55387.t1 AT5G15130 54.237 59 26 1 9 66 226 284 3.85e-15 72.4
MS.gene55387.t1 AT5G15130 54.237 59 26 1 9 66 184 242 3.91e-15 72.0
MS.gene55387.t1 AT2G24570 53.448 58 26 1 11 67 244 301 4.16e-15 71.6
MS.gene55387.t1 AT4G01250 52.632 57 26 1 11 66 129 185 5.34e-15 70.9
MS.gene55387.t1 AT1G68150 53.968 63 28 1 5 66 230 292 5.62e-15 71.6
MS.gene55387.t1 AT2G30590 52.632 57 26 1 11 66 314 370 5.79e-15 71.6
MS.gene55387.t1 AT4G23550 40.909 88 50 2 5 91 135 221 6.29e-15 70.9
MS.gene55387.t1 AT4G31550 51.724 58 27 1 11 67 247 304 6.36e-15 71.2
MS.gene55387.t1 AT1G18860 54.237 59 26 1 9 66 238 296 6.66e-15 71.6
MS.gene55387.t1 AT4G31550 51.724 58 27 1 11 67 246 303 6.91e-15 70.9
MS.gene55387.t1 AT3G58710 47.297 74 35 2 2 74 62 132 2.28e-14 68.9
MS.gene55387.t1 AT3G58710 47.297 74 35 2 2 74 63 133 2.30e-14 68.9
MS.gene55387.t1 AT2G23320 50.877 57 27 1 11 66 241 297 5.84e-14 68.2
MS.gene55387.t1 AT4G24240 46.154 65 34 1 6 69 277 341 1.63e-13 67.4
MS.gene55387.t1 AT5G28650 45.333 75 33 2 11 84 263 330 2.33e-13 66.6
MS.gene55387.t1 AT2G40740 47.619 63 29 2 10 68 173 235 2.67e-13 66.2
MS.gene55387.t1 AT1G66560 45.312 64 32 1 10 70 103 166 3.08e-13 65.5
MS.gene55387.t1 AT2G40740 47.619 63 29 2 10 68 182 244 3.23e-13 66.2
MS.gene55387.t1 AT4G11070 49.254 67 30 3 10 72 109 175 3.86e-13 65.9
MS.gene55387.t1 AT3G56400 41.333 75 40 2 9 79 119 193 4.41e-13 65.9
MS.gene55387.t1 AT4G11070 47.761 67 31 2 10 72 141 207 4.90e-13 65.9
MS.gene55387.t1 AT1G69810 51.667 60 27 2 9 66 144 203 7.04e-13 65.5
MS.gene55387.t1 AT1G69810 51.667 60 27 2 9 66 202 261 7.21e-13 65.5
MS.gene55387.t1 AT3G04670 44.000 75 34 2 11 84 263 330 7.80e-13 65.1
MS.gene55387.t1 AT1G66600 46.154 65 32 1 9 70 102 166 9.96e-13 64.3
MS.gene55387.t1 AT5G01900 49.123 57 26 1 11 64 111 167 1.30e-12 63.9
MS.gene55387.t1 AT5G24110 46.667 60 29 1 9 65 112 171 1.63e-12 64.3
MS.gene55387.t1 AT1G66550 49.123 57 26 1 11 64 104 160 3.04e-12 62.8
MS.gene55387.t1 AT1G66550 49.123 57 26 1 11 64 109 165 3.38e-12 62.8
MS.gene55387.t1 AT4G12020 48.333 60 30 1 8 67 466 524 6.87e-12 63.2
MS.gene55387.t1 AT4G12020 48.333 60 30 1 8 67 466 524 7.07e-12 63.2
MS.gene55387.t1 AT4G12020 48.333 60 30 1 8 67 466 524 7.11e-12 63.2
MS.gene55387.t1 AT4G12020 48.333 60 30 1 8 67 466 524 7.11e-12 63.2
MS.gene55387.t1 AT4G12020 48.333 60 30 1 8 67 466 524 7.20e-12 63.2
MS.gene55387.t1 AT4G12020 48.333 60 30 1 8 67 466 524 7.21e-12 63.2
MS.gene55387.t1 AT4G12020 48.333 60 30 1 8 67 399 457 7.26e-12 63.2
MS.gene55387.t1 AT4G12020 48.333 60 30 1 8 67 466 524 7.83e-12 62.8
MS.gene55387.t1 AT4G12020 48.333 60 30 1 8 67 466 524 7.83e-12 62.8
MS.gene55387.t1 AT4G12020 48.333 60 30 1 8 67 466 524 7.83e-12 62.8
MS.gene55387.t1 AT4G12020 48.333 60 30 1 8 67 466 524 1.12e-11 62.4
MS.gene55387.t1 AT4G23810 45.312 64 31 2 10 69 158 221 1.32e-11 61.6
MS.gene55387.t1 AT2G46400 38.158 76 44 1 2 74 96 171 1.38e-11 61.6
MS.gene55387.t1 AT2G40750 46.552 58 28 1 10 64 152 209 2.52e-11 60.8
MS.gene55387.t1 AT1G80590 47.368 57 27 1 11 64 86 142 5.08e-11 59.3
MS.gene55387.t1 AT5G22570 47.368 57 27 1 11 64 111 167 9.13e-11 59.3

Find 47 sgRNAs with CRISPR-Local

Find 119 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCCCGTGGAATGCGCAAC+AGG 0.355074 5.2:+33980159 MS.gene55387:CDS
TATGTAGTTATAACAATTGT+TGG 0.364884 5.2:-33979861 None:intergenic
AACTCTGCAGGTAATTGAAC+AGG 0.390496 5.2:-33979993 None:intergenic
CATCCCTGTTGCGCATTCCA+CGG 0.391032 5.2:-33980163 None:intergenic
ATCCCTGTTGCGCATTCCAC+GGG 0.402445 5.2:-33980162 None:intergenic
TTGCACCACCACTGTTTCTC+AGG 0.407420 5.2:+33980022 MS.gene55387:CDS
GGATACAGATGGAGGAAGTA+TGG 0.410295 5.2:+33978996 MS.gene55387:CDS
CTAGCCGATGAAGGACTACT+TGG 0.427250 5.2:+33980128 MS.gene55387:CDS
GTAAATGCACGGTGAAGAAA+AGG 0.427885 5.2:+33979817 MS.gene55387:CDS
CTTGTTGCAGGAGCTACTAT+AGG 0.437423 5.2:+33979784 MS.gene55387:intron
ATCGAGCAGCGCTACAATGC+CGG 0.445819 5.2:+33980082 MS.gene55387:CDS
GGCTGATGCATCACCGCCGC+TGG 0.448875 5.2:+33980103 MS.gene55387:CDS
TAATAGAATTGAGGCATTGT+AGG 0.457087 5.2:-33979969 None:intergenic
GAGGCATTGTAGGAGCAAAC+TGG 0.488963 5.2:-33979959 None:intergenic
ATGTAGTTATAACAATTGTT+GGG 0.492053 5.2:-33979860 None:intergenic
GTGCAAGTGTTTAACTCTGC+AGG 0.495119 5.2:-33980005 None:intergenic
GGGATGAGAGAAATATTTGA+TGG 0.502837 5.2:+33980180 MS.gene55387:CDS
TGACTAATGATTCCACTTCG+AGG 0.515148 5.2:-33979918 None:intergenic
AAGATGATCAACTTCACTCT+TGG 0.519601 5.2:-33978967 None:intergenic
ATTGTTATAACTACATATGA+AGG 0.523487 5.2:+33979867 MS.gene55387:CDS
CCGCTGGATCTAGCCGATGA+AGG 0.527848 5.2:+33980119 MS.gene55387:CDS
CATCATCCTCATGAGGCCGC+TGG 0.543236 5.2:+33980056 MS.gene55387:CDS
ATGGAGGAAGTATGGTCAGA+AGG 0.553401 5.2:+33979004 MS.gene55387:CDS
GATCCTCCAGCGGCCTCATG+AGG 0.556070 5.2:-33980062 None:intergenic
GAAGTTGATCATCTTGAGGA+TGG 0.560765 5.2:+33978975 MS.gene55387:CDS
ATCTCCAAGTAGTCCTTCAT+CGG 0.564084 5.2:-33980132 None:intergenic
TGAACAGGATAATAGAATTG+AGG 0.567757 5.2:-33979978 None:intergenic
CAACATTGTCATCACACAGT+TGG 0.575164 5.2:+33979891 MS.gene55387:CDS
ACAGTTGGATTTCCTCGAAG+TGG 0.579381 5.2:+33979906 MS.gene55387:CDS
AGCGGCGGTGATGCATCAGC+CGG 0.584373 5.2:-33980101 None:intergenic
TAAATGCACGGTGAAGAAAA+GGG 0.590194 5.2:+33979818 MS.gene55387:CDS
GAGTGAAGTTGATCATCTTG+AGG 0.617670 5.2:+33978971 MS.gene55387:CDS
ATCTTGAGGATGGATACAGA+TGG 0.629345 5.2:+33978985 MS.gene55387:CDS
CATCCTCATGAGGCCGCTGG+AGG 0.629985 5.2:+33980059 MS.gene55387:CDS
ACCCCGTGGAATGCGCAACA+GGG 0.634896 5.2:+33980160 MS.gene55387:CDS
TTGAGGATGGATACAGATGG+AGG 0.642515 5.2:+33978988 MS.gene55387:CDS
AAGGGTTGAACGTTCTCATG+AGG 0.649580 5.2:+33979836 MS.gene55387:CDS
GTGCACAAATAGTAAATGCA+CGG 0.652957 5.2:+33979806 MS.gene55387:CDS
TCAAACACATCATCCTCATG+AGG 0.661604 5.2:+33980049 MS.gene55387:CDS
CCTTCATCGGCTAGATCCAG+CGG 0.667147 5.2:-33980119 None:intergenic
AGCGCTGCTCGATCCTCCAG+CGG 0.686245 5.2:-33980072 None:intergenic
CTTGGAGATATTGTACCCCG+TGG 0.693708 5.2:+33980146 MS.gene55387:CDS
TCCCTGTTGCGCATTCCACG+GGG 0.706727 5.2:-33980161 None:intergenic
TCATCGGCTAGATCCAGCGG+CGG 0.712483 5.2:-33980116 None:intergenic
CAACTGTGTGATGACAATGT+TGG 0.715256 5.2:-33979890 None:intergenic
TTGACATGCCTGAGAAACAG+TGG 0.733828 5.2:-33980030 None:intergenic
ACATGCCTGAGAAACAGTGG+TGG 0.787622 5.2:-33980027 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTGATGGAAGAAAAATTA+AGG - chr5.2:33979082-33979101 None:intergenic 20.0%
!! ATCCATCAGAATATATAATT+AGG - chr5.2:33979752-33979771 None:intergenic 20.0%
!! ATGTAGTTATAACAATTGTT+GGG - chr5.2:33979863-33979882 None:intergenic 20.0%
!! ATTGTTATAACTACATATGA+AGG + chr5.2:33979867-33979886 MS.gene55387:CDS 20.0%
!! TATGTAGTTATAACAATTGT+TGG - chr5.2:33979864-33979883 None:intergenic 20.0%
!! TCCATCAGAATATATAATTA+GGG - chr5.2:33979751-33979770 None:intergenic 20.0%
!!! ATGGAAAGAATTTTAATTGA+TGG - chr5.2:33979096-33979115 None:intergenic 20.0%
!!! CTAATATTTTGTTACGTATA+GGG - chr5.2:33979132-33979151 None:intergenic 20.0%
!!! TGTTTTTGTACTTGTATTTA+GGG + chr5.2:33979367-33979386 MS.gene55387:intron 20.0%
!!! TTCAAATAACGTATTTTCTA+CGG - chr5.2:33979538-33979557 None:intergenic 20.0%
! ACAAAAACACTACAAGTATT+TGG - chr5.2:33979356-33979375 None:intergenic 25.0%
! ACCTTAAGACAATGAATTTA+TGG - chr5.2:33979260-33979279 None:intergenic 25.0%
! AGAGGAAAAAACTTATTCAA+TGG + chr5.2:33979602-33979621 MS.gene55387:intron 25.0%
! ATTTCAATTCATTCTCTTCA+AGG + chr5.2:33979423-33979442 MS.gene55387:intron 25.0%
! CCTTAAGACAATGAATTTAT+GGG - chr5.2:33979259-33979278 None:intergenic 25.0%
! CGTAACAAAATATTAGCAAA+CGG + chr5.2:33979136-33979155 MS.gene55387:intron 25.0%
! GAAAATACGTTATTTGAAGA+TGG + chr5.2:33979540-33979559 MS.gene55387:intron 25.0%
! GTAACAAAATATTAGCAAAC+GGG + chr5.2:33979137-33979156 MS.gene55387:intron 25.0%
! TTAAAAATAGTTCATTCCCT+AGG + chr5.2:33979030-33979049 MS.gene55387:CDS 25.0%
! TTTCAATTCATTCTCTTCAA+GGG + chr5.2:33979424-33979443 MS.gene55387:intron 25.0%
!! AATTCATTGTCTTAAGGTTT+TGG + chr5.2:33979262-33979281 MS.gene55387:intron 25.0%
!! ATTCATTGTCTTAAGGTTTT+GGG + chr5.2:33979263-33979282 MS.gene55387:intron 25.0%
!! ATTTGGTTCAAATTTGTGTT+GGG - chr5.2:33979339-33979358 None:intergenic 25.0%
!! GCTAATATTTTGTTACGTAT+AGG - chr5.2:33979133-33979152 None:intergenic 25.0%
!! TATTTGGTTCAAATTTGTGT+TGG - chr5.2:33979340-33979359 None:intergenic 25.0%
!!! ATATTAATTTGTCTTGTTGC+AGG + chr5.2:33979772-33979791 MS.gene55387:intron 25.0%
!!! GTGTTTTTGTACTTGTATTT+AGG + chr5.2:33979366-33979385 MS.gene55387:intron 25.0%
CAACTCTCATCATAAGAATT+GGG - chr5.2:33979470-33979489 None:intergenic 30.0%
CCCATAAATTCATTGTCTTA+AGG + chr5.2:33979256-33979275 MS.gene55387:intron 30.0%
GAAATGTAACCAACGTTTAT+TGG - chr5.2:33979669-33979688 None:intergenic 30.0%
GCCCTAATTATATATTCTGA+TGG + chr5.2:33979747-33979766 MS.gene55387:intron 30.0%
GTGAGTTATATGTTCCAAAT+CGG + chr5.2:33979194-33979213 MS.gene55387:intron 30.0%
TGAACAGGATAATAGAATTG+AGG - chr5.2:33979981-33980000 None:intergenic 30.0%
! AGTCATGAATCTTCTTTTAC+TGG + chr5.2:33979936-33979955 MS.gene55387:CDS 30.0%
! TTGTACCAGTAACTGATTTA+TGG + chr5.2:33979699-33979718 MS.gene55387:intron 30.0%
!! TAATAGAATTGAGGCATTGT+AGG - chr5.2:33979972-33979991 None:intergenic 30.0%
!!! AAGTTTTTTCCTCTTGAGTT+GGG - chr5.2:33979596-33979615 None:intergenic 30.0%
!!! TAAGTTTTTTCCTCTTGAGT+TGG - chr5.2:33979597-33979616 None:intergenic 30.0%
!!! TTGCTTTTTCCAATAAACGT+TGG + chr5.2:33979657-33979676 MS.gene55387:intron 30.0%
AAAAAGCAACCCCAAAGATT+TGG - chr5.2:33979646-33979665 None:intergenic 35.0%
AAAAGCAACCCCAAAGATTT+GGG - chr5.2:33979645-33979664 None:intergenic 35.0%
AAGATGATCAACTTCACTCT+TGG - chr5.2:33978970-33978989 None:intergenic 35.0%
ATAGTTGCTACACCAAAACT+AGG - chr5.2:33979403-33979422 None:intergenic 35.0%
ATTCTTATGATGAGAGTTGC+TGG + chr5.2:33979471-33979490 MS.gene55387:intron 35.0%
CTCATCCATAAATCAGTTAC+TGG - chr5.2:33979707-33979726 None:intergenic 35.0%
CTCTTCAAGGGTTTCATAAT+TGG + chr5.2:33979436-33979455 MS.gene55387:intron 35.0%
GCAACTCTCATCATAAGAAT+TGG - chr5.2:33979471-33979490 None:intergenic 35.0%
GTGCACAAATAGTAAATGCA+CGG + chr5.2:33979806-33979825 MS.gene55387:CDS 35.0%
TAAATGCACGGTGAAGAAAA+GGG + chr5.2:33979818-33979837 MS.gene55387:CDS 35.0%
TTCCAAATCGGATAGAAAAG+TGG + chr5.2:33979206-33979225 MS.gene55387:intron 35.0%
!! AGGTTGATTTGATGAGAAGT+AGG - chr5.2:33979062-33979081 None:intergenic 35.0%
!!! GGTTTTTTTCCACCTAGTTT+TGG + chr5.2:33979388-33979407 MS.gene55387:intron 35.0%
!!! TAAGGTTTTGGGTAAGAATG+TGG + chr5.2:33979274-33979293 MS.gene55387:intron 35.0%
AACTCTGCAGGTAATTGAAC+AGG - chr5.2:33979996-33980015 None:intergenic 40.0%
AGCAAACGGGTACATCTATT+AGG + chr5.2:33979150-33979169 MS.gene55387:intron 40.0%
ATCTCCAAGTAGTCCTTCAT+CGG - chr5.2:33980135-33980154 None:intergenic 40.0%
ATCTTGAGGATGGATACAGA+TGG + chr5.2:33978985-33979004 MS.gene55387:CDS 40.0%
ATGAGAGTTGCTGGTGTATT+GGG + chr5.2:33979480-33979499 MS.gene55387:intron 40.0%
ATTTGTGTTGGGTCATCATG+AGG - chr5.2:33979328-33979347 None:intergenic 40.0%
CAAATCGGATAGAAAAGTGG+AGG + chr5.2:33979209-33979228 MS.gene55387:intron 40.0%
CAACATTGTCATCACACAGT+TGG + chr5.2:33979891-33979910 MS.gene55387:CDS 40.0%
CAACTGTGTGATGACAATGT+TGG - chr5.2:33979893-33979912 None:intergenic 40.0%
GAGAAGTAGGTGTAAACCTA+GGG - chr5.2:33979049-33979068 None:intergenic 40.0%
GTAAATGCACGGTGAAGAAA+AGG + chr5.2:33979817-33979836 MS.gene55387:CDS 40.0%
TCAAACACATCATCCTCATG+AGG + chr5.2:33980049-33980068 MS.gene55387:CDS 40.0%
TGACTAATGATTCCACTTCG+AGG - chr5.2:33979921-33979940 None:intergenic 40.0%
TGAGAAGTAGGTGTAAACCT+AGG - chr5.2:33979050-33979069 None:intergenic 40.0%
TGCTATTAACCCAACTCAAG+AGG + chr5.2:33979584-33979603 MS.gene55387:intron 40.0%
TTTGTGTTGGGTCATCATGA+GGG - chr5.2:33979327-33979346 None:intergenic 40.0%
! ATAGGGAGTATGCACAATCA+TGG - chr5.2:33979115-33979134 None:intergenic 40.0%
! CAAAGATTTGGGACCAAAAG+CGG - chr5.2:33979634-33979653 None:intergenic 40.0%
! CTTTTGGTCCCAAATCTTTG+GGG + chr5.2:33979634-33979653 MS.gene55387:intron 40.0%
! GAAGTTGATCATCTTGAGGA+TGG + chr5.2:33978975-33978994 MS.gene55387:CDS 40.0%
! GAGTGAAGTTGATCATCTTG+AGG + chr5.2:33978971-33978990 MS.gene55387:CDS 40.0%
! GCTTTTGGTCCCAAATCTTT+GGG + chr5.2:33979633-33979652 MS.gene55387:intron 40.0%
!! CTCCACTTTTCTATCCGATT+TGG - chr5.2:33979211-33979230 None:intergenic 40.0%
AAGGGTTGAACGTTCTCATG+AGG + chr5.2:33979836-33979855 MS.gene55387:CDS 45.0%
ACAGTTGGATTTCCTCGAAG+TGG + chr5.2:33979906-33979925 MS.gene55387:CDS 45.0%
CTTGTTGCAGGAGCTACTAT+AGG + chr5.2:33979784-33979803 MS.gene55387:intron 45.0%
GATGAGAGTTGCTGGTGTAT+TGG + chr5.2:33979479-33979498 MS.gene55387:intron 45.0%
GGATACAGATGGAGGAAGTA+TGG + chr5.2:33978996-33979015 MS.gene55387:CDS 45.0%
GTGCAAGTGTTTAACTCTGC+AGG - chr5.2:33980008-33980027 None:intergenic 45.0%
GTTGCTACACCAAAACTAGG+TGG - chr5.2:33979400-33979419 None:intergenic 45.0%
TAAGAATGTGGCGTGGATGT+GGG + chr5.2:33979286-33979305 MS.gene55387:intron 45.0%
TTGACATGCCTGAGAAACAG+TGG - chr5.2:33980033-33980052 None:intergenic 45.0%
TTGAGGATGGATACAGATGG+AGG + chr5.2:33978988-33979007 MS.gene55387:CDS 45.0%
TTGTGTTGGGTCATCATGAG+GGG - chr5.2:33979326-33979345 None:intergenic 45.0%
! ATGGAGGAAGTATGGTCAGA+AGG + chr5.2:33979004-33979023 MS.gene55387:CDS 45.0%
! CGCTTTTGGTCCCAAATCTT+TGG + chr5.2:33979632-33979651 MS.gene55387:intron 45.0%
!! TTTTGGGTAAGAATGTGGCG+TGG + chr5.2:33979279-33979298 MS.gene55387:intron 45.0%
ACATGCCTGAGAAACAGTGG+TGG - chr5.2:33980030-33980049 None:intergenic 50.0%
CTAGCCGATGAAGGACTACT+TGG + chr5.2:33980128-33980147 MS.gene55387:CDS 50.0%
CTTGGAGATATTGTACCCCG+TGG + chr5.2:33980146-33980165 MS.gene55387:CDS 50.0%
GTAAGAATGTGGCGTGGATG+TGG + chr5.2:33979285-33979304 MS.gene55387:intron 50.0%
GTAGCACCATGAATAGCGCA+TGG - chr5.2:33979516-33979535 None:intergenic 50.0%
! AGATTTGGGACCAAAAGCGG+CGG - chr5.2:33979631-33979650 None:intergenic 50.0%
! TTGCACCACCACTGTTTCTC+AGG + chr5.2:33980022-33980041 MS.gene55387:CDS 50.0%
!! GAGGCATTGTAGGAGCAAAC+TGG - chr5.2:33979962-33979981 None:intergenic 50.0%
ATCCCTGTTGCGCATTCCAC+GGG - chr5.2:33980165-33980184 None:intergenic 55.0%
ATCGAGCAGCGCTACAATGC+CGG + chr5.2:33980082-33980101 MS.gene55387:CDS 55.0%
CATCCCTGTTGCGCATTCCA+CGG - chr5.2:33980166-33980185 None:intergenic 55.0%
GCGCTACCATGCGCTATTCA+TGG + chr5.2:33979507-33979526 MS.gene55387:intron 55.0%
! CCTTCATCGGCTAGATCCAG+CGG - chr5.2:33980122-33980141 None:intergenic 55.0%
!! TCAATGGTCACCGCCGCTTT+TGG + chr5.2:33979618-33979637 MS.gene55387:intron 55.0%
ACCCCGTGGAATGCGCAACA+GGG + chr5.2:33980160-33980179 MS.gene55387:CDS 60.0%
CATCATCCTCATGAGGCCGC+TGG + chr5.2:33980056-33980075 MS.gene55387:CDS 60.0%
CCGCTGGATCTAGCCGATGA+AGG + chr5.2:33980119-33980138 MS.gene55387:CDS 60.0%
GAATGTGGCGTGGATGTGGG+TGG + chr5.2:33979289-33979308 MS.gene55387:intron 60.0%
GTGGATGTGGGTGGTCTCCT+GGG + chr5.2:33979298-33979317 MS.gene55387:intron 60.0%
TACCCCGTGGAATGCGCAAC+AGG + chr5.2:33980159-33980178 MS.gene55387:CDS 60.0%
TCCCTGTTGCGCATTCCACG+GGG - chr5.2:33980164-33980183 None:intergenic 60.0%
! TCATCGGCTAGATCCAGCGG+CGG - chr5.2:33980119-33980138 None:intergenic 60.0%
AGCGCTGCTCGATCCTCCAG+CGG - chr5.2:33980075-33980094 None:intergenic 65.0%
AGCGGCGGTGATGCATCAGC+CGG - chr5.2:33980104-33980123 None:intergenic 65.0%
CATCCTCATGAGGCCGCTGG+AGG + chr5.2:33980059-33980078 MS.gene55387:CDS 65.0%
CGTGGATGTGGGTGGTCTCC+TGG + chr5.2:33979297-33979316 MS.gene55387:intron 65.0%
GATCCTCCAGCGGCCTCATG+AGG - chr5.2:33980065-33980084 None:intergenic 65.0%
GGTCATCATGAGGGGAGCCC+AGG - chr5.2:33979318-33979337 None:intergenic 65.0%
GGCTGATGCATCACCGCCGC+TGG + chr5.2:33980103-33980122 MS.gene55387:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 33978963 33980199 33978963 ID=MS.gene55387
chr5.2 mRNA 33978963 33980199 33978963 ID=MS.gene55387.t1;Parent=MS.gene55387
chr5.2 exon 33978963 33979051 33978963 ID=MS.gene55387.t1.exon1;Parent=MS.gene55387.t1
chr5.2 CDS 33978963 33979051 33978963 ID=cds.MS.gene55387.t1;Parent=MS.gene55387.t1
chr5.2 exon 33979794 33980199 33979794 ID=MS.gene55387.t1.exon2;Parent=MS.gene55387.t1
chr5.2 CDS 33979794 33980199 33979794 ID=cds.MS.gene55387.t1;Parent=MS.gene55387.t1
Gene Sequence

>MS.gene55387

ATGACCAAGAGTGAAGTTGATCATCTTGAGGATGGATACAGATGGAGGAAGTATGGTCAGAAGGCAGTTAAAAATAGTTCATTCCCTAGGTTTACACCTACTTCTCATCAAATCAACCTTAATTTTTCTTCCATCAATTAAAATTCTTTCCATGATTGTGCATACTCCCTATACGTAACAAAATATTAGCAAACGGGTACATCTATTAGGTTCAAATTGTTGTGTGCAAGTGTGAGTTATATGTTCCAAATCGGATAGAAAAGTGGAGGTTGAGCACTTTATAAGTAAGAGAACCCATAAATTCATTGTCTTAAGGTTTTGGGTAAGAATGTGGCGTGGATGTGGGTGGTCTCCTGGGCTCCCCTCATGATGACCCAACACAAATTTGAACCAAATACTTGTAGTGTTTTTGTACTTGTATTTAGGGTTTTTTTCCACCTAGTTTTGGTGTAGCAACTATATTTCAATTCATTCTCTTCAAGGGTTTCATAATTGGACATTAAACCCAATTCTTATGATGAGAGTTGCTGGTGTATTGGGCGTTGCGCTACCATGCGCTATTCATGGTGCTACCGTAGAAAATACGTTATTTGAAGATGGTGATGATACAAATACATTATGTGCTATTAACCCAACTCAAGAGGAAAAAACTTATTCAATGGTCACCGCCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTACGCTATTTGTACCAGTAACTGATTTATGGATGAGTTCTCTTGTACGAGTAACTTGCCCTAATTATATATTCTGATGGATATATTAATTTGTCTTGTTGCAGGAGCTACTATAGGTGCACAAATAGTAAATGCACGGTGAAGAAAAGGGTTGAACGTTCTCATGAGGACCCAACAATTGTTATAACTACATATGAAGGCCAACATTGTCATCACACAGTTGGATTTCCTCGAAGTGGAATCATTAGTCATGAATCTTCTTTTACTGGCCAGTTTGCTCCTACAATGCCTCAATTCTATTATCCTGTTCAATTACCTGCAGAGTTAAACACTTGCACCACCACTGTTTCTCAGGCATGTCAAACACATCATCCTCATGAGGCCGCTGGAGGATCGAGCAGCGCTACAATGCCGGCTGATGCATCACCGCCGCTGGATCTAGCCGATGAAGGACTACTTGGAGATATTGTACCCCGTGGAATGCGCAACAGGGATGAGAGAAATATTTGA
Protein sequence

>MS.gene55387.t1

MTKSEVDHLEDGYRWRKYGQKAVKNSSFPRSYYRCTNSKCTVKKRVERSHEDPTIVITTYEGQHCHHTVGFPRSGIISHESSFTGQFAPTMPQFYYPVQLPAELNTCTTTVSQACQTHHPHEAAGGSSSATMPADASPPLDLADEGLLGDIVPRGMRNRDERNI