AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55606

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55606.t1 MTR_6g027370 95.423 284 13 0 1 284 64 347 0.0 537
MS.gene55606.t1 MTR_6g027360 61.004 259 78 8 28 284 71 308 7.91e-94 280
MS.gene55606.t1 MTR_6g027340 51.408 284 59 7 1 284 1 205 1.25e-81 244
MS.gene55606.t1 MTR_7g086960 52.843 299 118 5 7 282 54 352 6.58e-77 238
MS.gene55606.t1 MTR_4g082040 68.333 120 38 0 29 148 98 217 8.22e-57 188
MS.gene55606.t1 MTR_5g041570 59.333 150 57 2 2 151 103 248 1.50e-56 188
MS.gene55606.t1 MTR_6g074860 70.192 104 31 0 36 139 4 107 1.70e-51 169
MS.gene55606.t1 MTR_3g089045 70.909 110 32 0 30 139 10 119 3.07e-51 170
MS.gene55606.t1 MTR_4g019370 54.902 102 46 0 35 136 37 138 1.91e-38 138
MS.gene55606.t1 MTR_4g094982 48.062 129 60 1 35 156 4 132 1.12e-37 134
MS.gene55606.t1 MTR_5g016510 45.455 132 66 1 35 166 4 129 1.77e-36 132
MS.gene55606.t1 MTR_5g082910 42.975 121 69 0 35 155 18 138 5.24e-33 122
MS.gene55606.t1 MTR_6g015455 50.980 102 50 0 35 136 4 105 6.02e-33 128
MS.gene55606.t1 MTR_3g101290 49.020 102 52 0 35 136 36 137 4.20e-32 118
MS.gene55606.t1 MTR_3g110028 45.763 118 63 1 26 143 76 192 5.17e-31 122
MS.gene55606.t1 MTR_1g026870 44.915 118 64 1 26 143 76 192 1.25e-29 118
MS.gene55606.t1 MTR_7g061330 46.847 111 58 1 26 136 104 213 2.31e-28 114
MS.gene55606.t1 MTR_7g461410 46.847 111 58 1 26 136 104 213 2.31e-28 114
MS.gene55606.t1 MTR_7g061330 46.847 111 58 1 26 136 68 177 2.77e-28 113
MS.gene55606.t1 MTR_5g070020 36.548 197 108 4 9 195 101 290 9.12e-28 110
MS.gene55606.t1 MTR_3g463400 48.039 102 53 0 35 136 132 233 9.99e-28 111
MS.gene55606.t1 MTR_5g049190 46.667 105 53 1 35 139 18 119 6.16e-27 105
MS.gene55606.t1 MTR_7g451170 46.078 102 55 0 35 136 190 291 8.06e-26 105
MS.gene55606.t1 MTR_7g037260 44.660 103 57 0 35 137 144 246 1.35e-25 104
MS.gene55606.t1 MTR_2g067420 49.485 97 48 1 36 131 16 112 7.08e-25 102
MS.gene55606.t1 MTR_2g097910 44.144 111 61 1 36 145 22 132 3.73e-24 99.8
MS.gene55606.t1 MTR_4g105660 42.308 104 60 0 33 136 177 280 4.57e-24 100
MS.gene55606.t1 MTR_5g010650 45.192 104 56 1 26 129 101 203 1.01e-23 100
MS.gene55606.t1 MTR_3g077650 47.059 102 54 0 35 136 180 281 1.05e-23 100
MS.gene55606.t1 MTR_4g088015 44.554 101 56 0 35 135 220 320 3.04e-23 99.0
MS.gene55606.t1 MTR_7g037130 46.392 97 52 0 35 131 144 240 3.11e-23 97.8
MS.gene55606.t1 MTR_2g089450 45.098 102 53 2 36 135 14 114 3.31e-23 95.9
MS.gene55606.t1 MTR_4g065017 42.453 106 60 1 36 140 19 124 4.52e-23 97.1
MS.gene55606.t1 MTR_7g450950 42.056 107 62 0 25 131 146 252 4.95e-23 97.1
MS.gene55606.t1 MTR_3g074520 45.631 103 53 2 36 136 14 115 5.82e-23 97.1
MS.gene55606.t1 MTR_5g042030 45.361 97 52 1 36 131 9 105 8.35e-23 95.5
MS.gene55606.t1 MTR_2g089620 31.034 203 137 3 36 235 14 216 8.97e-23 96.3
MS.gene55606.t1 MTR_3g052450 42.342 111 63 1 36 145 42 152 9.67e-23 97.8
MS.gene55606.t1 MTR_1g100667 40.351 114 67 1 36 148 15 128 1.00e-22 95.1
MS.gene55606.t1 MTR_6g055910 41.748 103 59 1 36 137 16 118 1.32e-22 94.7
MS.gene55606.t1 MTR_7g035350 45.361 97 53 0 34 130 223 319 1.72e-22 96.7
MS.gene55606.t1 MTR_7g110830 41.905 105 60 1 36 139 14 118 1.72e-22 95.9
MS.gene55606.t1 MTR_0008s0390 44.118 102 56 1 36 136 15 116 2.05e-22 94.0
MS.gene55606.t1 MTR_7g115650 38.129 139 80 3 36 168 14 152 2.05e-22 92.8
MS.gene55606.t1 MTR_7g010210 41.176 102 59 1 36 136 14 115 2.30e-22 94.0
MS.gene55606.t1 MTR_7g010210 41.176 102 59 1 36 136 14 115 2.55e-22 94.7
MS.gene55606.t1 MTR_3g052430 40.517 116 68 1 36 150 43 158 2.88e-22 96.7
MS.gene55606.t1 MTR_0008s0470 44.118 102 56 1 36 136 15 116 3.97e-22 93.6
MS.gene55606.t1 MTR_4g063100 42.593 108 59 2 32 137 5 111 4.17e-22 92.8
MS.gene55606.t1 MTR_1g057980 45.745 94 51 0 36 129 80 173 5.28e-22 93.6
MS.gene55606.t1 MTR_3g028740 41.026 117 67 2 23 138 12 127 7.38e-22 94.0
MS.gene55606.t1 MTR_3g461490 34.483 174 97 4 36 199 14 180 7.79e-22 93.6
MS.gene55606.t1 MTR_1g085640 40.952 105 61 1 36 139 14 118 8.49e-22 94.4
MS.gene55606.t1 MTR_1g076150 26.172 256 163 5 36 283 14 251 9.26e-22 92.0
MS.gene55606.t1 MTR_8g017440 43.689 103 55 2 36 136 14 115 9.62e-22 93.6
MS.gene55606.t1 MTR_5g029840 42.157 102 58 1 36 136 14 115 1.32e-21 93.2
MS.gene55606.t1 MTR_0251s0050 43.137 102 57 1 36 136 15 116 1.53e-21 91.7
MS.gene55606.t1 MTR_7g087130 33.775 151 92 2 36 185 14 157 1.74e-21 92.8
MS.gene55606.t1 MTR_3g039990 38.679 106 64 1 36 140 15 120 2.88e-21 91.7
MS.gene55606.t1 MTR_6g012180 41.237 97 56 1 36 131 14 110 3.05e-21 91.7
MS.gene55606.t1 MTR_5g010020 45.263 95 51 1 36 129 14 108 3.08e-21 92.0
MS.gene55606.t1 MTR_4g105130 41.176 102 59 1 36 136 14 115 3.19e-21 92.4
MS.gene55606.t1 MTR_8g098860 40.952 105 61 1 36 139 14 118 3.42e-21 91.7
MS.gene55606.t1 MTR_8g060940 45.000 100 54 1 36 134 9 108 3.60e-21 90.1
MS.gene55606.t1 MTR_1g085040 40.566 106 60 2 36 139 14 118 4.09e-21 92.0
MS.gene55606.t1 MTR_0140s0030 41.121 107 61 2 32 136 10 116 4.46e-21 91.7
MS.gene55606.t1 MTR_0489s0020 41.121 107 61 2 32 136 10 116 4.46e-21 91.7
MS.gene55606.t1 MTR_4g100720 42.857 112 62 2 27 136 5 116 4.85e-21 88.2
MS.gene55606.t1 MTR_1g100653 39.252 107 64 1 36 141 14 120 5.30e-21 90.9
MS.gene55606.t1 MTR_7g017260 33.974 156 97 2 36 188 27 179 6.19e-21 90.1
MS.gene55606.t1 MTR_2g089420 40.870 115 62 3 36 148 13 123 7.41e-21 92.0
MS.gene55606.t1 MTR_2g011660 43.137 102 57 1 36 136 15 116 8.26e-21 90.9
MS.gene55606.t1 MTR_2g064160 41.748 103 57 2 36 136 13 114 8.51e-21 90.5
MS.gene55606.t1 MTR_1g017000 28.514 249 140 9 36 282 14 226 8.88e-21 89.4
MS.gene55606.t1 MTR_7g111290 46.809 94 47 2 36 127 14 106 1.07e-20 90.9
MS.gene55606.t1 MTR_1g112760 40.777 103 58 2 36 136 15 116 1.18e-20 88.6
MS.gene55606.t1 MTR_4g082230 42.157 102 58 1 36 136 14 115 1.22e-20 91.3
MS.gene55606.t1 MTR_8g017540 32.124 193 98 6 36 210 60 237 1.50e-20 90.9
MS.gene55606.t1 MTR_5g014990 42.718 103 57 2 36 136 14 116 1.56e-20 89.7
MS.gene55606.t1 MTR_4g091490 44.118 102 56 1 36 136 15 116 1.57e-20 90.5
MS.gene55606.t1 MTR_6g012690 29.344 259 142 6 36 281 14 244 1.68e-20 90.1
MS.gene55606.t1 MTR_7g096930 39.669 121 68 2 36 151 14 134 2.30e-20 88.6
MS.gene55606.t1 MTR_1g110460 32.370 173 107 4 17 181 6 176 2.50e-20 89.0
MS.gene55606.t1 MTR_5g079220 42.157 102 58 1 36 136 23 124 2.52e-20 88.6
MS.gene55606.t1 MTR_2g096380 41.509 106 59 2 36 139 8 112 3.16e-20 87.4
MS.gene55606.t1 MTR_7g117730 41.176 102 59 1 36 136 14 115 3.73e-20 87.8
MS.gene55606.t1 MTR_8g042410 36.364 132 81 2 11 141 16 145 5.07e-20 90.1
MS.gene55606.t1 MTR_4g082290 42.157 102 58 1 36 136 14 115 5.71e-20 89.4
MS.gene55606.t1 MTR_3g077110 40.777 103 58 2 36 136 14 115 5.89e-20 88.6
MS.gene55606.t1 MTR_2g099740 41.748 103 57 2 36 136 14 115 5.99e-20 89.0
MS.gene55606.t1 MTR_8g027345 40.385 104 61 1 36 138 14 117 9.40e-20 87.4
MS.gene55606.t1 MTR_4g125520 40.566 106 62 1 36 140 14 119 1.15e-19 87.0
MS.gene55606.t1 MTR_0001s0360 41.176 102 59 1 36 136 9 110 1.20e-19 86.3
MS.gene55606.t1 MTR_8g095390 40.196 102 60 1 36 136 14 115 1.21e-19 87.4
MS.gene55606.t1 MTR_8g017340 41.748 103 58 1 36 136 14 116 1.26e-19 88.6
MS.gene55606.t1 MTR_5g079670 42.718 103 56 2 36 136 13 114 1.26e-19 85.1
MS.gene55606.t1 MTR_5g078950 40.777 103 60 1 30 131 3 105 1.27e-19 86.3
MS.gene55606.t1 MTR_4g478180 37.288 118 70 3 36 150 15 131 1.64e-19 87.4
MS.gene55606.t1 MTR_4g073420 42.157 102 58 1 36 136 14 115 1.68e-19 86.3
MS.gene55606.t1 MTR_6g009430 42.157 102 58 1 36 136 14 115 1.72e-19 87.0
MS.gene55606.t1 MTR_5g078860 42.157 102 58 1 36 136 9 110 1.76e-19 86.7
MS.gene55606.t1 MTR_5g007370 40.187 107 61 2 36 140 14 119 1.83e-19 86.7
MS.gene55606.t1 MTR_7g061550 37.719 114 68 1 36 146 7 120 2.09e-19 87.0
MS.gene55606.t1 MTR_1g043080 41.176 102 59 1 36 136 14 115 2.42e-19 85.5
MS.gene55606.t1 MTR_1g083630 42.453 106 59 2 36 140 14 118 2.56e-19 88.2
MS.gene55606.t1 MTR_1g062940 39.806 103 59 2 36 136 8 109 2.57e-19 84.7
MS.gene55606.t1 MTR_3g103570 41.748 103 58 2 36 136 14 116 2.77e-19 86.7
MS.gene55606.t1 MTR_0008s0280 41.237 97 54 2 36 130 14 109 2.91e-19 84.7
MS.gene55606.t1 MTR_5g078800 41.176 102 59 1 36 136 9 110 3.27e-19 85.1
MS.gene55606.t1 MTR_1g086530 38.053 113 67 2 30 140 29 140 3.33e-19 85.5
MS.gene55606.t1 MTR_3g011610 38.136 118 68 2 36 150 39 154 3.46e-19 87.4
MS.gene55606.t1 MTR_2g088170 39.231 130 75 3 14 141 10 137 3.52e-19 87.4
MS.gene55606.t1 MTR_8g017500 40.777 103 58 2 36 136 14 115 3.76e-19 86.3
MS.gene55606.t1 MTR_5g079290 40.196 102 60 1 36 136 19 120 4.45e-19 84.7
MS.gene55606.t1 MTR_4g097570 44.330 97 51 2 36 129 14 110 4.65e-19 85.5
MS.gene55606.t1 MTR_7g011170 35.246 122 77 2 36 155 14 135 5.47e-19 85.5
MS.gene55606.t1 MTR_8g017390 41.748 103 58 1 36 136 14 116 5.86e-19 86.7
MS.gene55606.t1 MTR_3g097450 40.196 102 60 1 36 136 14 115 8.64e-19 84.7
MS.gene55606.t1 MTR_6g055910 49.275 69 35 0 69 137 21 89 8.84e-19 84.0
MS.gene55606.t1 MTR_1g073170 33.582 134 79 3 29 153 8 140 1.07e-18 83.6
MS.gene55606.t1 MTR_0197s0010 36.364 132 78 3 39 165 6 136 1.09e-18 83.2
MS.gene55606.t1 MTR_0063s0090 36.134 119 68 3 36 147 14 131 1.18e-18 82.8
MS.gene55606.t1 MTR_1g043050 34.667 150 85 4 36 178 14 157 1.20e-18 83.6
MS.gene55606.t1 MTR_1g017140 40.777 103 59 2 36 136 14 116 1.32e-18 84.7
MS.gene55606.t1 MTR_5g078910 40.196 102 60 1 36 136 9 110 1.34e-18 84.3
MS.gene55606.t1 MTR_8g017350 42.308 104 56 3 36 136 14 116 1.50e-18 85.9
MS.gene55606.t1 MTR_5g062790 38.462 117 70 2 36 150 11 127 1.57e-18 84.0
MS.gene55606.t1 MTR_1g021230 38.462 104 63 1 36 138 59 162 1.91e-18 85.1
MS.gene55606.t1 MTR_1g086510 33.824 136 88 2 14 148 2 136 2.06e-18 83.2
MS.gene55606.t1 MTR_8g020490 42.157 102 58 1 36 136 10 111 2.24e-18 82.8
MS.gene55606.t1 MTR_5g079120 33.548 155 93 4 36 189 63 208 2.25e-18 83.6
MS.gene55606.t1 MTR_4g029540 40.000 105 61 2 36 138 12 116 2.29e-18 83.6
MS.gene55606.t1 MTR_4g485530 41.748 103 57 2 36 136 14 115 2.58e-18 81.3
MS.gene55606.t1 MTR_7g076740 38.889 108 62 3 36 140 14 120 3.27e-18 83.2
MS.gene55606.t1 MTR_8g006470 40.187 107 62 2 36 140 12 118 3.62e-18 82.8
MS.gene55606.t1 MTR_4g097570 43.750 96 52 2 36 129 14 109 3.80e-18 82.8
MS.gene55606.t1 MTR_1g045610 40.000 105 60 2 36 138 23 126 5.11e-18 81.6
MS.gene55606.t1 MTR_5g088080 40.952 105 57 3 36 138 14 115 5.49e-18 82.0
MS.gene55606.t1 MTR_5g088150 40.952 105 57 3 36 138 14 115 5.49e-18 82.0
MS.gene55606.t1 MTR_5g488210 40.952 105 57 3 36 138 14 115 5.49e-18 82.0
MS.gene55606.t1 MTR_5g488170 40.952 105 57 3 36 138 14 115 6.05e-18 81.3
MS.gene55606.t1 MTR_0247s0040 42.718 103 58 1 28 129 1 103 6.14e-18 79.7
MS.gene55606.t1 MTR_5g088640 40.952 105 57 3 36 138 14 115 7.18e-18 81.6
MS.gene55606.t1 MTR_4g128670 41.837 98 55 2 36 131 14 111 8.19e-18 82.4
MS.gene55606.t1 MTR_4g057635 37.607 117 70 3 36 149 14 130 9.71e-18 82.0
MS.gene55606.t1 MTR_7g035075 41.053 95 55 1 36 129 16 110 1.10e-17 79.7
MS.gene55606.t1 MTR_3g083540 39.216 102 61 1 36 136 43 144 1.14e-17 81.6
MS.gene55606.t1 MTR_2g034790 30.719 153 104 2 36 187 14 165 1.34e-17 81.6
MS.gene55606.t1 MTR_3g065440 39.252 107 62 2 36 140 14 119 1.34e-17 81.6
MS.gene55606.t1 MTR_7g102110 36.842 114 70 2 36 147 14 127 1.46e-17 80.9
MS.gene55606.t1 MTR_5g088610 29.255 188 130 3 36 220 11 198 1.56e-17 81.6
MS.gene55606.t1 MTR_5g078140 39.252 107 62 2 36 140 14 119 2.37e-17 80.9
MS.gene55606.t1 MTR_8g031360 38.462 104 60 3 36 136 15 117 2.81e-17 80.5
MS.gene55606.t1 MTR_5g078930 37.963 108 66 1 30 136 5 112 3.34e-17 79.0
MS.gene55606.t1 MTR_2g033170 36.842 114 71 1 36 148 26 139 3.40e-17 80.5
MS.gene55606.t1 MTR_2g095520 40.816 98 56 2 36 131 14 111 3.68e-17 80.5
MS.gene55606.t1 MTR_4g102380 39.806 103 59 2 36 136 14 115 6.61e-17 79.0
MS.gene55606.t1 MTR_4g121460 36.364 110 69 1 36 144 14 123 1.06e-16 79.3
MS.gene55606.t1 MTR_7g111290 57.627 59 25 0 69 127 6 64 1.14e-16 79.3
MS.gene55606.t1 MTR_4g123040 36.842 114 71 1 36 148 26 139 1.23e-16 79.0
MS.gene55606.t1 MTR_0193s0090 29.577 213 130 5 28 231 1 202 1.23e-16 77.0
MS.gene55606.t1 MTR_6g006030 41.053 95 55 1 36 129 16 110 2.05e-16 76.3
MS.gene55606.t1 MTR_4g063100 45.070 71 39 0 69 139 14 84 1.04e-15 74.7
MS.gene55606.t1 MTR_6g090405 39.806 103 60 2 36 136 14 116 1.24e-15 75.1
MS.gene55606.t1 MTR_8g468380 31.304 115 78 1 39 153 25 138 5.47e-15 75.1
MS.gene55606.t1 MTR_2g096380 43.662 71 40 0 69 139 23 93 7.75e-15 72.4
MS.gene55606.t1 MTR_3g045430 34.906 106 68 1 36 140 15 120 1.29e-14 72.8
MS.gene55606.t1 MTR_5g007300 44.000 75 41 1 36 109 66 140 2.37e-14 68.9
MS.gene55606.t1 MTR_5g038910 30.702 114 77 1 39 152 29 140 4.92e-14 72.0
MS.gene55606.t1 MTR_5g038910 30.702 114 77 1 39 152 29 140 6.07e-14 72.0
MS.gene55606.t1 MTR_6g080360 34.737 95 61 1 35 129 478 571 7.81e-14 72.0
MS.gene55606.t1 MTR_6g080360 34.737 95 61 1 35 129 258 351 9.89e-14 71.6
MS.gene55606.t1 MTR_7g109320 39.216 102 61 1 36 136 14 115 9.57e-13 67.8
MS.gene55606.t1 MTR_1g008970 40.278 72 42 1 55 126 111 181 2.52e-12 65.9
MS.gene55606.t1 MTR_7g115550 32.990 97 64 1 37 133 8 103 7.33e-12 65.9
MS.gene55606.t1 MTR_4g128190 40.964 83 47 2 69 150 34 115 1.19e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55606.t1 AT1G69560 51.892 185 76 3 36 210 107 288 7.28e-58 188
MS.gene55606.t1 AT1G69560 51.892 185 76 3 36 210 123 304 1.14e-57 188
MS.gene55606.t1 AT1G26780 39.338 272 128 6 36 282 98 357 2.14e-56 185
MS.gene55606.t1 AT1G17950 40.079 252 135 7 36 284 5 243 4.38e-56 181
MS.gene55606.t1 AT1G26780 65.873 126 42 1 36 161 98 222 3.04e-54 177
MS.gene55606.t1 AT4G33450 40.541 259 129 8 28 282 10 247 2.03e-53 174
MS.gene55606.t1 AT5G17800 40.590 271 107 7 30 282 87 321 2.11e-52 174
MS.gene55606.t1 AT1G73410 40.076 262 118 6 36 284 6 241 2.35e-49 164
MS.gene55606.t1 AT1G73410 72.115 104 29 0 36 139 6 109 5.95e-49 161
MS.gene55606.t1 AT3G29020 63.248 117 43 0 31 147 60 176 6.62e-49 162
MS.gene55606.t1 AT3G29020 63.248 117 43 0 31 147 62 178 4.14e-48 162
MS.gene55606.t1 AT3G55730 55.660 106 47 0 35 140 55 160 9.93e-37 135
MS.gene55606.t1 AT5G39700 60.606 99 39 0 37 135 57 155 1.02e-36 129
MS.gene55606.t1 AT2G39880 54.054 111 51 0 29 139 43 153 8.20e-36 132
MS.gene55606.t1 AT4G37260 53.922 102 47 0 35 136 12 113 4.98e-35 129
MS.gene55606.t1 AT5G67300 52.941 102 48 0 35 136 5 106 6.06e-35 128
MS.gene55606.t1 AT3G50060 49.020 102 52 0 35 136 5 106 2.06e-33 124
MS.gene55606.t1 AT3G09230 51.961 102 49 0 35 136 54 155 2.54e-33 125
MS.gene55606.t1 AT2G23290 50.980 102 50 0 35 136 12 113 1.34e-32 122
MS.gene55606.t1 AT3G09370 50.000 102 51 0 35 136 134 235 7.76e-30 117
MS.gene55606.t1 AT3G09370 50.000 102 51 0 35 136 129 230 7.93e-30 117
MS.gene55606.t1 AT5G02320 35.079 191 114 3 35 215 66 256 1.12e-29 117
MS.gene55606.t1 AT3G09370 50.000 102 51 0 35 136 142 243 1.30e-29 117
MS.gene55606.t1 AT5G02320 35.079 191 114 3 35 215 126 316 1.43e-29 117
MS.gene55606.t1 AT5G02320 35.079 191 114 3 35 215 126 316 1.43e-29 117
MS.gene55606.t1 AT5G11510 42.373 118 67 1 26 143 72 188 1.18e-28 115
MS.gene55606.t1 AT5G11510 42.373 118 67 1 26 143 72 188 1.18e-28 115
MS.gene55606.t1 AT5G11510 42.373 118 67 1 26 143 72 188 1.18e-28 115
MS.gene55606.t1 AT5G11510 42.373 118 67 1 26 143 72 188 2.11e-28 114
MS.gene55606.t1 AT5G11510 42.373 118 67 1 26 143 72 188 2.49e-28 114
MS.gene55606.t1 AT4G32730 43.243 111 62 1 26 136 78 187 2.74e-27 111
MS.gene55606.t1 AT4G32730 43.243 111 62 1 26 136 78 187 3.08e-27 111
MS.gene55606.t1 AT4G32730 43.243 111 62 1 26 136 78 187 3.08e-27 111
MS.gene55606.t1 AT4G32730 43.243 111 62 1 26 136 78 187 3.08e-27 111
MS.gene55606.t1 AT4G32730 43.243 111 62 1 26 136 78 187 3.08e-27 111
MS.gene55606.t1 AT5G11050 48.039 102 53 0 35 136 104 205 5.90e-26 106
MS.gene55606.t1 AT5G58850 42.500 120 69 0 17 136 86 205 1.47e-25 105
MS.gene55606.t1 AT3G48920 44.715 123 57 3 9 130 3 115 4.35e-25 101
MS.gene55606.t1 AT5G40360 43.590 117 61 2 36 152 158 269 9.11e-25 102
MS.gene55606.t1 AT1G79180 46.078 102 54 1 36 136 16 117 3.81e-24 99.4
MS.gene55606.t1 AT2G25230 44.554 101 54 2 38 137 28 127 3.90e-24 97.8
MS.gene55606.t1 AT4G25560 46.078 102 54 1 36 136 12 113 7.45e-24 98.2
MS.gene55606.t1 AT1G18570 44.118 102 56 1 36 136 15 116 7.96e-24 99.4
MS.gene55606.t1 AT3G27785 36.364 154 89 3 35 185 188 335 8.94e-24 100
MS.gene55606.t1 AT3G53200 45.192 104 54 2 36 137 11 113 9.60e-24 97.1
MS.gene55606.t1 AT5G14750 37.415 147 80 4 36 174 18 160 1.49e-23 95.5
MS.gene55606.t1 AT5G62470 40.000 105 63 0 36 140 14 118 1.71e-23 98.6
MS.gene55606.t1 AT4G01680 42.308 104 59 1 36 138 14 117 4.20e-23 95.5
MS.gene55606.t1 AT5G54230 45.098 102 55 1 36 136 14 115 4.46e-23 97.1
MS.gene55606.t1 AT4G26930 41.121 107 62 1 36 141 21 127 5.09e-23 97.8
MS.gene55606.t1 AT3G12720 40.476 126 71 3 13 136 2 125 5.10e-23 96.7
MS.gene55606.t1 AT4G28110 45.631 103 53 2 36 136 14 115 5.22e-23 95.9
MS.gene55606.t1 AT3G23250 37.931 145 76 2 36 179 14 145 5.33e-23 95.9
MS.gene55606.t1 AT4G17785 44.860 107 56 2 36 140 15 120 6.40e-23 97.1
MS.gene55606.t1 AT4G17785 44.860 107 56 2 36 140 15 120 7.29e-23 97.1
MS.gene55606.t1 AT3G11440 42.056 107 61 1 36 141 43 149 7.99e-23 98.2
MS.gene55606.t1 AT3G11440 42.056 107 61 1 36 141 43 149 7.99e-23 98.2
MS.gene55606.t1 AT3G11440 42.056 107 61 1 36 141 43 149 7.99e-23 98.2
MS.gene55606.t1 AT3G11440 42.056 107 61 1 36 141 43 149 9.79e-23 97.8
MS.gene55606.t1 AT5G40330 44.118 102 56 1 36 136 14 115 1.22e-22 93.6
MS.gene55606.t1 AT4G01680 42.308 104 59 1 36 138 14 117 1.44e-22 95.9
MS.gene55606.t1 AT3G47600 40.566 106 62 1 36 140 14 119 1.80e-22 95.5
MS.gene55606.t1 AT1G63910 42.105 114 65 1 36 148 14 127 1.85e-22 95.9
MS.gene55606.t1 AT4G18770 43.137 102 58 0 35 136 216 317 1.98e-22 96.3
MS.gene55606.t1 AT4G05100 44.118 102 56 1 36 136 15 116 2.97e-22 94.7
MS.gene55606.t1 AT1G56160 43.689 103 55 2 36 136 16 117 3.59e-22 94.0
MS.gene55606.t1 AT3G27920 40.171 117 63 2 21 136 7 117 5.02e-22 92.0
MS.gene55606.t1 AT5G52260 46.552 116 55 3 36 145 14 128 5.11e-22 93.2
MS.gene55606.t1 AT5G52600 44.118 102 56 1 36 136 14 115 5.99e-22 91.3
MS.gene55606.t1 AT5G62470 39.623 106 63 1 36 140 14 119 7.10e-22 94.0
MS.gene55606.t1 AT1G57560 32.749 171 95 4 36 189 14 181 9.89e-22 92.4
MS.gene55606.t1 AT5G65230 45.631 103 53 2 36 136 14 115 1.32e-21 92.8
MS.gene55606.t1 AT3G02940 44.118 102 56 1 36 136 14 115 1.34e-21 92.8
MS.gene55606.t1 AT5G12870 39.623 106 63 1 36 140 20 125 1.44e-21 92.0
MS.gene55606.t1 AT5G10280 44.660 103 54 2 36 136 14 115 1.54e-21 92.8
MS.gene55606.t1 AT5G06100 41.121 107 62 1 36 141 34 140 1.68e-21 94.4
MS.gene55606.t1 AT5G06100 41.121 107 62 1 36 141 34 140 1.68e-21 94.4
MS.gene55606.t1 AT5G06100 41.121 107 62 1 36 141 34 140 1.68e-21 94.4
MS.gene55606.t1 AT5G06100 41.121 107 62 1 36 141 34 140 1.68e-21 94.4
MS.gene55606.t1 AT5G60890 40.000 105 62 1 36 139 14 118 1.86e-21 92.0
MS.gene55606.t1 AT5G06100 41.121 107 62 1 36 141 34 140 1.87e-21 94.0
MS.gene55606.t1 AT1G74080 45.263 95 51 1 36 129 14 108 1.96e-21 92.4
MS.gene55606.t1 AT4G01680 39.655 116 57 2 36 138 14 129 2.03e-21 92.8
MS.gene55606.t1 AT3G02940 44.118 102 56 1 36 136 14 115 2.24e-21 92.0
MS.gene55606.t1 AT3G02940 44.118 102 56 1 36 136 14 115 2.24e-21 92.0
MS.gene55606.t1 AT4G38620 34.868 152 92 2 36 186 14 159 2.71e-21 91.3
MS.gene55606.t1 AT3G08500 41.346 104 60 1 36 138 32 135 3.09e-21 92.0
MS.gene55606.t1 AT3G01140 41.176 102 59 1 36 136 14 115 3.17e-21 92.0
MS.gene55606.t1 AT2G26960 43.269 104 58 1 36 138 22 125 3.25e-21 93.2
MS.gene55606.t1 AT5G57620 43.689 103 56 2 36 136 14 116 3.78e-21 91.7
MS.gene55606.t1 AT3G01140 41.176 102 59 1 36 136 57 158 4.17e-21 92.4
MS.gene55606.t1 AT1G74430 41.176 102 59 1 36 136 14 115 4.57e-21 90.5
MS.gene55606.t1 AT3G30210 39.669 121 66 2 36 149 29 149 5.27e-21 90.5
MS.gene55606.t1 AT2G32460 41.346 104 60 1 36 138 20 123 5.37e-21 92.8
MS.gene55606.t1 AT5G16770 42.453 106 60 1 36 140 14 119 5.54e-21 91.3
MS.gene55606.t1 AT5G16770 42.453 106 60 1 36 140 14 119 5.54e-21 91.3
MS.gene55606.t1 AT2G26950 35.000 120 74 2 20 138 2 118 5.59e-21 92.0
MS.gene55606.t1 AT5G15310 41.748 103 57 2 36 136 14 115 5.96e-21 91.3
MS.gene55606.t1 AT1G08810 41.176 102 59 1 36 136 14 115 5.97e-21 90.5
MS.gene55606.t1 AT3G28910 41.176 102 59 1 36 136 14 115 6.47e-21 90.9
MS.gene55606.t1 AT5G15310 41.748 103 57 2 36 136 14 115 7.05e-21 90.9
MS.gene55606.t1 AT1G16490 44.118 102 56 1 36 136 16 117 7.21e-21 90.1
MS.gene55606.t1 AT2G32460 41.346 104 60 1 36 138 8 111 7.33e-21 92.4
MS.gene55606.t1 AT1G74650 40.196 102 60 1 36 136 14 115 7.56e-21 90.9
MS.gene55606.t1 AT5G16770 42.453 106 60 1 36 140 14 119 8.54e-21 90.9
MS.gene55606.t1 AT5G16770 42.453 106 60 1 36 140 14 119 8.54e-21 90.9
MS.gene55606.t1 AT2G47190 41.509 106 61 1 36 140 22 127 8.77e-21 89.7
MS.gene55606.t1 AT1G34670 44.118 102 56 1 36 136 14 115 1.06e-20 90.9
MS.gene55606.t1 AT3G13890 39.640 111 57 2 36 136 14 124 1.11e-20 90.9
MS.gene55606.t1 AT5G15310 41.748 103 57 2 36 136 14 115 1.39e-20 88.6
MS.gene55606.t1 AT4G21440 44.118 102 56 1 36 136 14 115 1.51e-20 90.5
MS.gene55606.t1 AT5G14340 41.121 107 60 2 36 140 26 131 1.52e-20 89.0
MS.gene55606.t1 AT3G12820 41.748 103 57 2 36 136 16 117 1.69e-20 88.2
MS.gene55606.t1 AT5G07690 42.574 101 57 1 36 135 14 114 2.03e-20 89.7
MS.gene55606.t1 AT3G46130 40.769 130 66 4 18 145 1 121 2.13e-20 88.6
MS.gene55606.t1 AT5G59780 41.509 106 59 2 36 139 10 114 2.25e-20 87.8
MS.gene55606.t1 AT5G07700 42.157 102 58 1 36 136 14 115 2.39e-20 89.7
MS.gene55606.t1 AT5G07700 42.157 102 58 1 36 136 14 115 2.39e-20 89.7
MS.gene55606.t1 AT5G61420 40.952 105 61 1 36 139 14 118 2.56e-20 89.7
MS.gene55606.t1 AT1G57560 41.748 103 57 2 36 136 14 115 3.00e-20 89.0
MS.gene55606.t1 AT2G31180 41.176 102 59 1 36 136 14 115 3.03e-20 87.8
MS.gene55606.t1 AT5G26660 41.905 105 58 2 36 138 14 117 3.06e-20 89.4
MS.gene55606.t1 AT3G13890 40.196 102 60 1 36 136 14 115 3.22e-20 89.4
MS.gene55606.t1 AT5G56110 43.137 102 57 1 36 136 14 115 4.28e-20 88.6
MS.gene55606.t1 AT1G68320 39.623 106 63 1 36 140 21 126 5.25e-20 87.8
MS.gene55606.t1 AT1G25340 40.000 105 59 1 36 140 20 120 5.99e-20 87.4
MS.gene55606.t1 AT1G25340 39.623 106 63 1 36 140 20 125 6.33e-20 87.4
MS.gene55606.t1 AT1G25340 40.000 105 59 1 36 140 20 120 6.50e-20 87.8
MS.gene55606.t1 AT4G00540 36.607 112 68 1 36 144 103 214 8.88e-20 88.6
MS.gene55606.t1 AT1G09540 41.509 106 59 2 36 139 14 118 1.08e-19 88.2
MS.gene55606.t1 AT5G65790 42.718 103 57 2 36 136 14 116 1.11e-19 88.2
MS.gene55606.t1 AT3G49690 43.689 103 56 2 36 136 14 116 1.22e-19 87.4
MS.gene55606.t1 AT1G35515 40.196 102 60 1 36 136 14 115 1.38e-19 85.1
MS.gene55606.t1 AT1G79180 34.815 135 54 1 36 136 16 150 1.40e-19 87.4
MS.gene55606.t1 AT1G18710 38.235 102 62 1 36 136 14 115 1.46e-19 86.3
MS.gene55606.t1 AT4G00540 36.607 112 68 1 36 144 101 212 1.52e-19 88.2
MS.gene55606.t1 AT5G55020 39.252 107 64 1 36 141 28 134 3.02e-19 87.8
MS.gene55606.t1 AT1G22640 42.157 102 58 1 36 136 14 115 3.40e-19 85.1
MS.gene55606.t1 AT5G40430 36.036 111 70 1 36 146 54 163 3.48e-19 85.1
MS.gene55606.t1 AT5G16600 32.370 173 102 4 36 206 14 173 4.70e-19 85.9
MS.gene55606.t1 AT5G14750 38.938 113 58 3 69 174 18 126 4.88e-19 82.8
MS.gene55606.t1 AT5G35550 45.263 95 51 1 36 129 16 110 4.97e-19 84.7
MS.gene55606.t1 AT5G49620 36.090 133 84 1 9 140 1 133 5.71e-19 85.5
MS.gene55606.t1 AT3G60460 40.187 107 62 2 36 140 13 119 7.19e-19 85.1
MS.gene55606.t1 AT2G16720 40.196 102 60 1 36 136 14 115 9.58e-19 84.0
MS.gene55606.t1 AT4G09460 39.216 102 61 1 36 136 14 115 1.03e-18 83.2
MS.gene55606.t1 AT1G48000 37.719 114 70 1 36 148 34 147 1.24e-18 83.2
MS.gene55606.t1 AT3G53200 52.174 69 33 0 69 137 12 80 1.54e-18 82.0
MS.gene55606.t1 AT4G34990 41.176 102 59 1 36 136 14 115 1.62e-18 83.6
MS.gene55606.t1 AT5G23000 40.777 103 59 2 36 136 14 116 2.15e-18 84.0
MS.gene55606.t1 AT3G28470 44.211 95 52 1 36 129 14 108 3.01e-18 83.6
MS.gene55606.t1 AT3G13540 38.889 108 64 2 31 136 19 126 3.26e-18 82.4
MS.gene55606.t1 AT5G49330 40.196 102 60 1 36 136 14 115 5.36e-18 83.2
MS.gene55606.t1 AT1G66230 39.252 107 62 2 36 140 14 119 5.50e-18 82.0
MS.gene55606.t1 AT1G06180 40.777 103 58 2 36 136 14 115 6.42e-18 81.3
MS.gene55606.t1 AT4G12350 34.752 141 88 3 36 174 14 152 7.08e-18 82.0
MS.gene55606.t1 AT5G40350 41.053 95 55 1 36 129 19 113 7.26e-18 80.5
MS.gene55606.t1 AT3G01530 40.594 101 59 1 36 135 27 127 8.10e-18 80.1
MS.gene55606.t1 AT3G18100 43.182 88 50 0 36 123 498 585 1.05e-17 83.6
MS.gene55606.t1 AT3G18100 32.292 96 63 2 35 129 446 540 5.58e-11 63.5
MS.gene55606.t1 AT3G18100 43.182 88 50 0 36 123 546 633 1.16e-17 83.6
MS.gene55606.t1 AT3G18100 32.292 96 63 2 35 129 494 588 6.94e-11 63.2
MS.gene55606.t1 AT1G66370 37.143 105 65 1 36 139 10 114 1.35e-17 80.5
MS.gene55606.t1 AT2G02820 38.000 100 62 0 39 138 33 132 1.36e-17 81.6
MS.gene55606.t1 AT3G24310 37.391 115 69 2 36 148 20 133 1.42e-17 80.9
MS.gene55606.t1 AT3G61250 37.864 103 61 2 36 136 14 115 1.45e-17 81.3
MS.gene55606.t1 AT3G18100 43.182 88 50 0 36 123 333 420 1.65e-17 82.8
MS.gene55606.t1 AT3G18100 32.292 96 63 2 35 129 281 375 8.95e-11 62.8
MS.gene55606.t1 AT3G18100 43.182 88 50 0 36 123 385 472 1.82e-17 82.8
MS.gene55606.t1 AT3G27810 37.168 113 68 2 36 145 22 134 2.14e-17 79.7
MS.gene55606.t1 AT2G02820 36.585 123 69 1 39 152 33 155 2.31e-17 82.0
MS.gene55606.t1 AT3G12820 50.000 68 34 0 69 136 2 69 2.32e-17 78.6
MS.gene55606.t1 AT2G02820 36.585 123 69 1 39 152 33 155 3.06e-17 81.6
MS.gene55606.t1 AT4G13480 39.048 105 61 2 36 138 8 111 4.19e-17 79.3
MS.gene55606.t1 AT1G56650 33.758 157 97 3 29 181 3 156 4.52e-17 79.0
MS.gene55606.t1 AT3G06490 39.252 107 62 2 36 140 21 126 4.60e-17 80.1
MS.gene55606.t1 AT4G37780 38.532 109 62 3 36 142 14 119 9.16e-17 79.0
MS.gene55606.t1 AT4G22680 35.714 140 85 3 36 173 14 150 1.49e-16 77.8
MS.gene55606.t1 AT2G37630 37.383 107 64 1 36 139 4 110 1.52e-16 79.3
MS.gene55606.t1 AT5G26660 46.835 79 41 1 61 138 8 86 1.90e-16 78.6
MS.gene55606.t1 AT2G47460 35.000 120 77 1 36 154 14 133 1.92e-16 79.0
MS.gene55606.t1 AT2G36890 40.777 103 59 2 36 136 55 157 3.36e-16 77.8
MS.gene55606.t1 AT2G36890 40.777 103 59 2 36 136 14 116 3.56e-16 77.4
MS.gene55606.t1 AT5G59780 46.479 71 38 0 69 139 23 93 4.86e-16 75.5
MS.gene55606.t1 AT1G66380 38.532 109 66 1 29 136 3 111 5.33e-16 73.6
MS.gene55606.t1 AT3G62610 37.255 102 63 1 36 136 14 115 7.43e-16 77.0
MS.gene55606.t1 AT3G46130 44.156 77 43 0 69 145 13 89 7.67e-16 75.1
MS.gene55606.t1 AT3G46130 44.156 77 43 0 69 145 23 99 7.83e-16 75.5
MS.gene55606.t1 AT5G62320 38.182 110 58 3 36 136 15 123 1.06e-15 75.1
MS.gene55606.t1 AT3G47600 44.444 72 40 0 69 140 42 113 1.79e-15 75.9
MS.gene55606.t1 AT5G49620 32.653 147 84 2 9 140 1 147 2.03e-15 75.5
MS.gene55606.t1 AT5G35550 55.738 61 27 0 69 129 53 113 3.27e-15 73.9
MS.gene55606.t1 AT1G14350 35.000 100 65 0 39 138 28 127 3.76e-15 75.5
MS.gene55606.t1 AT1G14350 35.000 100 65 0 39 138 28 127 3.76e-15 75.5
MS.gene55606.t1 AT5G40350 49.180 61 31 0 69 129 8 68 3.92e-15 72.0
MS.gene55606.t1 AT1G66390 38.182 110 67 1 29 137 3 112 5.23e-15 73.2
MS.gene55606.t1 AT3G27810 41.772 79 44 1 69 145 7 85 1.05e-14 71.2
MS.gene55606.t1 AT1G09770 31.655 139 87 4 37 171 8 142 4.93e-12 66.6
MS.gene55606.t1 AT5G14750 34.314 102 56 3 80 174 2 99 1.13e-11 62.0
MS.gene55606.t1 AT5G14750 34.314 102 56 3 80 174 2 99 1.13e-11 62.0
MS.gene55606.t1 AT1G66380 47.826 69 36 0 69 137 11 79 1.51e-11 60.5

Find 54 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACAATGAATCAATTT+TGG 0.098317 6.2:+18976974 MS.gene55606:CDS
AAGGAAGAAAATGAGAAATT+TGG 0.160898 6.2:+18975382 MS.gene55606:CDS
CTAGCTACATTATTCTTTCC+TGG 0.241589 6.2:-18976252 None:intergenic
AAGGGAAAAGTTGCAGATTA+AGG 0.276686 6.2:+18975998 MS.gene55606:intron
GTGTCATTTATTGACTTTCT+TGG 0.290615 6.2:+18977029 MS.gene55606:CDS
TCTCATTGCACTGCAAATTC+TGG 0.302223 6.2:-18976850 None:intergenic
TTGCATGCTCATACACTTCA+TGG 0.308993 6.2:+18976087 MS.gene55606:CDS
AAAGCTGCTCTATTGATTCT+AGG 0.313747 6.2:-18976039 None:intergenic
AACACCAAGCTTTCCATTAG+AGG 0.318928 6.2:+18975406 MS.gene55606:CDS
CACATTTGCAAATTCTTTCC+TGG 0.321921 6.2:+18976123 MS.gene55606:CDS
TAGCTTTCTCTTTCTTGAAA+TGG 0.335783 6.2:-18976217 None:intergenic
CATACTCATTTGTGAATCAT+AGG 0.343634 6.2:-18976364 None:intergenic
TGGTCTCCAATGACCTCTAA+TGG 0.346646 6.2:-18975419 None:intergenic
AGTGCATTGTCTGTCCTTCC+AGG 0.351387 6.2:-18976141 None:intergenic
ATGAATTTGGTCCTCACAAT+TGG 0.357978 6.2:+18975473 MS.gene55606:CDS
AGGAAGAAAATGAGAAATTT+GGG 0.359459 6.2:+18975383 MS.gene55606:CDS
AGCTTTCCATTAGAGGTCAT+TGG 0.384561 6.2:+18975413 MS.gene55606:CDS
TGAGTTTGAATATGAATGAT+TGG 0.387864 6.2:-18976919 None:intergenic
ATAGAAAGAAAGGTAGAAGT+AGG 0.391467 6.2:+18976813 MS.gene55606:CDS
CCAATCTCAACCTCACTACT+AGG 0.403128 6.2:+18976322 MS.gene55606:CDS
AAATGTGAGAGATAAGATTA+AGG 0.412885 6.2:+18977007 MS.gene55606:CDS
TAGCTACATTATTCTTTCCT+GGG 0.420815 6.2:-18976251 None:intergenic
AGGCTTACTTATAGAAAGAA+AGG 0.428586 6.2:+18976803 MS.gene55606:intron
AAGGTAGAAGTAGGGGACTA+TGG 0.428911 6.2:+18976822 MS.gene55606:CDS
GTTGAGTTAGATTCATCAAA+CGG 0.452201 6.2:-18976294 None:intergenic
CCTAGTAGTGAGGTTGAGAT+TGG 0.475467 6.2:-18976322 None:intergenic
TAGAAAGAAAGGTAGAAGTA+GGG 0.480588 6.2:+18976814 MS.gene55606:CDS
ATACACTTCATGGTAACAAA+TGG 0.493137 6.2:+18976097 MS.gene55606:CDS
TCTTGGAGTAGGTGATACAT+AGG 0.495278 6.2:+18977046 MS.gene55606:CDS
GAACAAATACATGGAAGATC+GGG 0.507355 6.2:+18975508 MS.gene55606:CDS
TTTATTGACTTTCTTGGAGT+AGG 0.507502 6.2:+18977035 MS.gene55606:CDS
AAGCTAACATTTCAAATCCC+AGG 0.510479 6.2:+18976234 MS.gene55606:CDS
TGAACAAATACATGGAAGAT+CGG 0.519885 6.2:+18975507 MS.gene55606:CDS
TTGAATATGAATGATTGGAT+TGG 0.524412 6.2:-18976914 None:intergenic
ATGACCTCTAATGGAAAGCT+TGG 0.534815 6.2:-18975410 None:intergenic
TCATTTGTGAATCATAGGCT+TGG 0.536300 6.2:-18976359 None:intergenic
AGAAAGAAAGGTAGAAGTAG+GGG 0.536632 6.2:+18976815 MS.gene55606:CDS
CTTGGAGTAGGTGATACATA+GGG 0.552083 6.2:+18977047 MS.gene55606:CDS
TTAAGCTTAGCATCTTCAGA+TGG 0.553691 6.2:-18975439 None:intergenic
TTCATCAAACGGATTTGTGA+TGG 0.555045 6.2:-18976283 None:intergenic
AGGTTGTTCTCAAGGTCACA+TGG 0.563554 6.2:+18976872 MS.gene55606:CDS
TGATCATGGCTAGGAAGCAA+AGG 0.567964 6.2:+18976181 MS.gene55606:CDS
AACATTGCTGAACAAATACA+TGG 0.572771 6.2:+18975499 MS.gene55606:CDS
GCAATGAGAGGTTGTTCTCA+AGG 0.574721 6.2:+18976864 MS.gene55606:CDS
TTTGCAAATTCTTTCCTGGA+AGG 0.574934 6.2:+18976127 MS.gene55606:CDS
CTTGTCAATGAAAGTTGACA+AGG 0.581911 6.2:+18975363 MS.gene55606:CDS
GATCATGGCTAGGAAGCAAA+GGG 0.587417 6.2:+18976182 MS.gene55606:CDS
GCAATGTTGTTCCAATTGTG+AGG 0.589775 6.2:-18975484 None:intergenic
TAGGCTTGGTAATTAAGCAA+AGG 0.630274 6.2:-18976345 None:intergenic
CATGGGAAAGCTTAAGAGTG+TGG 0.638298 6.2:+18976890 MS.gene55606:CDS
GGAAAAGTTGCAGATTAAGG+TGG 0.645857 6.2:+18976001 MS.gene55606:CDS
TAAGCAAAGGCCTAGTAGTG+AGG 0.652290 6.2:-18976332 None:intergenic
AGAATTTGCAGTGCAATGAG+AGG 0.669530 6.2:+18976852 MS.gene55606:CDS
GGTTGTTCTCAAGGTCACAT+GGG 0.692971 6.2:+18976873 MS.gene55606:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGTCAAATAAATTAATAT+AGG - chr6.2:18976739-18976758 None:intergenic 10.0%
!!! AAAAATTGAATATTTTCAAA+AGG + chr6.2:18975679-18975698 MS.gene55606:intron 10.0%
!!! TTTTTGTGTTTTATTTTTTT+AGG + chr6.2:18976783-18976802 MS.gene55606:intron 10.0%
!!! AAAAATAATAAAGGGAATTT+TGG + chr6.2:18975325-18975344 MS.gene55606:CDS 15.0%
!!! AAAATAATAAAGGGAATTTT+GGG + chr6.2:18975326-18975345 MS.gene55606:CDS 15.0%
!!! AAAATTTTGAAGCAATTTAA+AGG - chr6.2:18976680-18976699 None:intergenic 15.0%
!!! TCATTTGTAATATTTTTTGA+AGG + chr6.2:18975926-18975945 MS.gene55606:intron 15.0%
!! CAAATATAGTAGTATTACAT+TGG + chr6.2:18976472-18976491 MS.gene55606:intron 20.0%
!! CAATGTAATACTACTATATT+TGG - chr6.2:18976474-18976493 None:intergenic 20.0%
!! TTAATTACCATTATCACAAA+AGG - chr6.2:18975979-18975998 None:intergenic 20.0%
!!! AAAAAACTTGTTGATGAATT+TGG + chr6.2:18975460-18975479 MS.gene55606:CDS 20.0%
!!! AAATAATAAAGGGAATTTTG+GGG + chr6.2:18975327-18975346 MS.gene55606:CDS 20.0%
!!! AATTTGTTATGTTCTAGTTT+AGG - chr6.2:18975540-18975559 None:intergenic 20.0%
!!! ATGAACAATGAATCAATTTT+GGG + chr6.2:18976975-18976994 MS.gene55606:CDS 20.0%
!!! TTGTGATAATGGTAATTAAA+GGG + chr6.2:18975980-18975999 MS.gene55606:intron 20.0%
!!! TTTGTGATAATGGTAATTAA+AGG + chr6.2:18975979-18975998 MS.gene55606:intron 20.0%
! AAACACAAAAATCAACAACA+TGG - chr6.2:18976774-18976793 None:intergenic 25.0%
! AAATGTGAGAGATAAGATTA+AGG + chr6.2:18977007-18977026 MS.gene55606:CDS 25.0%
! AAGGAAGAAAATGAGAAATT+TGG + chr6.2:18975382-18975401 MS.gene55606:CDS 25.0%
! AGGAAGAAAATGAGAAATTT+GGG + chr6.2:18975383-18975402 MS.gene55606:CDS 25.0%
! ATTATAATCGCTGTTAAATG+CGG - chr6.2:18976651-18976670 None:intergenic 25.0%
! TGAGTTTGAATATGAATGAT+TGG - chr6.2:18976922-18976941 None:intergenic 25.0%
! TTGAATATGAATGATTGGAT+TGG - chr6.2:18976917-18976936 None:intergenic 25.0%
!! CATGAACAATGAATCAATTT+TGG + chr6.2:18976974-18976993 MS.gene55606:CDS 25.0%
AACATTGCTGAACAAATACA+TGG + chr6.2:18975499-18975518 MS.gene55606:CDS 30.0%
AGGCTTACTTATAGAAAGAA+AGG + chr6.2:18976803-18976822 MS.gene55606:intron 30.0%
ATACACTTCATGGTAACAAA+TGG + chr6.2:18976097-18976116 MS.gene55606:CDS 30.0%
ATAGAAAGAAAGGTAGAAGT+AGG + chr6.2:18976813-18976832 MS.gene55606:CDS 30.0%
CATACTCATTTGTGAATCAT+AGG - chr6.2:18976367-18976386 None:intergenic 30.0%
CATTTGATAAGCTAAAGTGA+AGG - chr6.2:18976398-18976417 None:intergenic 30.0%
GTATTACATTGGAAATTGTG+CGG + chr6.2:18976483-18976502 MS.gene55606:intron 30.0%
GTTGAGTTAGATTCATCAAA+CGG - chr6.2:18976297-18976316 None:intergenic 30.0%
TAGAAAGAAAGGTAGAAGTA+GGG + chr6.2:18976814-18976833 MS.gene55606:CDS 30.0%
TAGCTACATTATTCTTTCCT+GGG - chr6.2:18976254-18976273 None:intergenic 30.0%
TAGCTTTCTCTTTCTTGAAA+TGG - chr6.2:18976220-18976239 None:intergenic 30.0%
TGAACAAATACATGGAAGAT+CGG + chr6.2:18975507-18975526 MS.gene55606:CDS 30.0%
! GAATCATTTTCATGTGATCA+TGG + chr6.2:18976167-18976186 MS.gene55606:CDS 30.0%
! TGAGTTTCCTTTTGTGATAA+TGG + chr6.2:18975969-18975988 MS.gene55606:intron 30.0%
! TTACTCTTTTTGCACTTTTG+TGG - chr6.2:18976515-18976534 None:intergenic 30.0%
!! GTGTCATTTATTGACTTTCT+TGG + chr6.2:18977029-18977048 MS.gene55606:CDS 30.0%
!! TATATCGATTCTAACGCAAT+TGG + chr6.2:18975778-18975797 MS.gene55606:intron 30.0%
!! TTTATTGACTTTCTTGGAGT+AGG + chr6.2:18977035-18977054 MS.gene55606:CDS 30.0%
AAATGCTAACTAGTGTCACA+GGG + chr6.2:18976432-18976451 MS.gene55606:intron 35.0%
AAGCTAACATTTCAAATCCC+AGG + chr6.2:18976234-18976253 MS.gene55606:CDS 35.0%
AAGGGAAAAGTTGCAGATTA+AGG + chr6.2:18975998-18976017 MS.gene55606:intron 35.0%
AGAAAGAAAGGTAGAAGTAG+GGG + chr6.2:18976815-18976834 MS.gene55606:CDS 35.0%
ATGAATTTGGTCCTCACAAT+TGG + chr6.2:18975473-18975492 MS.gene55606:CDS 35.0%
ATGACTCAAATATAGGTCTG+CGG + chr6.2:18976597-18976616 MS.gene55606:intron 35.0%
CACATTTGCAAATTCTTTCC+TGG + chr6.2:18976123-18976142 MS.gene55606:CDS 35.0%
CTAGCTACATTATTCTTTCC+TGG - chr6.2:18976255-18976274 None:intergenic 35.0%
CTTGTCAATGAAAGTTGACA+AGG + chr6.2:18975363-18975382 MS.gene55606:CDS 35.0%
GAACAAATACATGGAAGATC+GGG + chr6.2:18975508-18975527 MS.gene55606:CDS 35.0%
GCAACTTCAATTGAATATCG+TGG - chr6.2:18976623-18976642 None:intergenic 35.0%
GGTTAGCATGACTCAAATAT+AGG + chr6.2:18976590-18976609 MS.gene55606:intron 35.0%
TCATTTGTGAATCATAGGCT+TGG - chr6.2:18976362-18976381 None:intergenic 35.0%
TTAAGCTTAGCATCTTCAGA+TGG - chr6.2:18975442-18975461 None:intergenic 35.0%
TTTGCAAATTCTTTCCTGGA+AGG + chr6.2:18976127-18976146 MS.gene55606:CDS 35.0%
! ATTTTCATGTGATCATGGCT+AGG + chr6.2:18976172-18976191 MS.gene55606:CDS 35.0%
! TAGGCTTGGTAATTAAGCAA+AGG - chr6.2:18976348-18976367 None:intergenic 35.0%
! TTCATCAAACGGATTTGTGA+TGG - chr6.2:18976286-18976305 None:intergenic 35.0%
!! AAAGCTGCTCTATTGATTCT+AGG - chr6.2:18976042-18976061 None:intergenic 35.0%
AACACCAAGCTTTCCATTAG+AGG + chr6.2:18975406-18975425 MS.gene55606:CDS 40.0%
AGAATTTGCAGTGCAATGAG+AGG + chr6.2:18976852-18976871 MS.gene55606:CDS 40.0%
AGCTTTCCATTAGAGGTCAT+TGG + chr6.2:18975413-18975432 MS.gene55606:CDS 40.0%
ATGACCTCTAATGGAAAGCT+TGG - chr6.2:18975413-18975432 None:intergenic 40.0%
GAAATGCTAACTAGTGTCAC+AGG + chr6.2:18976431-18976450 MS.gene55606:intron 40.0%
GCAATGTTGTTCCAATTGTG+AGG - chr6.2:18975487-18975506 None:intergenic 40.0%
GGAAAAGTTGCAGATTAAGG+TGG + chr6.2:18976001-18976020 MS.gene55606:CDS 40.0%
TCGATTCTAACGCAATTGGT+TGG + chr6.2:18975782-18975801 MS.gene55606:intron 40.0%
TCTCATTGCACTGCAAATTC+TGG - chr6.2:18976853-18976872 None:intergenic 40.0%
TTGCATGCTCATACACTTCA+TGG + chr6.2:18976087-18976106 MS.gene55606:CDS 40.0%
! AGCTTTTAGTGAGGAAGAAG+AGG + chr6.2:18976056-18976075 MS.gene55606:CDS 40.0%
! CAATAGAGCAGCTTTTAGTG+AGG + chr6.2:18976047-18976066 MS.gene55606:CDS 40.0%
AAGGTAGAAGTAGGGGACTA+TGG + chr6.2:18976822-18976841 MS.gene55606:CDS 45.0%
ACTTCTTCAACCAGTGATCC+GGG + chr6.2:18976561-18976580 MS.gene55606:intron 45.0%
AGGTTGTTCTCAAGGTCACA+TGG + chr6.2:18976872-18976891 MS.gene55606:CDS 45.0%
CATGGGAAAGCTTAAGAGTG+TGG + chr6.2:18976890-18976909 MS.gene55606:CDS 45.0%
CCAATCTCAACCTCACTACT+AGG + chr6.2:18976322-18976341 MS.gene55606:CDS 45.0%
CCTAGTAGTGAGGTTGAGAT+TGG - chr6.2:18976325-18976344 None:intergenic 45.0%
GACTTCTTCAACCAGTGATC+CGG + chr6.2:18976560-18976579 MS.gene55606:intron 45.0%
GATCATGGCTAGGAAGCAAA+GGG + chr6.2:18976182-18976201 MS.gene55606:CDS 45.0%
GCAATGAGAGGTTGTTCTCA+AGG + chr6.2:18976864-18976883 MS.gene55606:CDS 45.0%
GGTTGTTCTCAAGGTCACAT+GGG + chr6.2:18976873-18976892 MS.gene55606:CDS 45.0%
TAAGCAAAGGCCTAGTAGTG+AGG - chr6.2:18976335-18976354 None:intergenic 45.0%
TGATCATGGCTAGGAAGCAA+AGG + chr6.2:18976181-18976200 MS.gene55606:CDS 45.0%
TGGTCTCCAATGACCTCTAA+TGG - chr6.2:18975422-18975441 None:intergenic 45.0%
AGTGCATTGTCTGTCCTTCC+AGG - chr6.2:18976144-18976163 None:intergenic 50.0%
CTTCTTCAACCAGTGATCCG+GGG + chr6.2:18976562-18976581 MS.gene55606:intron 50.0%
GTCATGCTAACCAGTGTCCC+CGG - chr6.2:18976582-18976601 None:intergenic 55.0%
AACCAGTGATCCGGGGACAC+TGG + chr6.2:18976569-18976588 MS.gene55606:intron 60.0%
AACCAGTGTCCCCGGATCAC+TGG - chr6.2:18976574-18976593 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 18975319 18977067 18975319 ID=MS.gene55606
chr6.2 mRNA 18975319 18977067 18975319 ID=MS.gene55606.t1;Parent=MS.gene55606
chr6.2 exon 18975319 18975529 18975319 ID=MS.gene55606.t1.exon1;Parent=MS.gene55606.t1
chr6.2 CDS 18975319 18975529 18975319 ID=cds.MS.gene55606.t1;Parent=MS.gene55606.t1
chr6.2 exon 18976001 18976381 18976001 ID=MS.gene55606.t1.exon2;Parent=MS.gene55606.t1
chr6.2 CDS 18976001 18976381 18976001 ID=cds.MS.gene55606.t1;Parent=MS.gene55606.t1
chr6.2 exon 18976805 18977067 18976805 ID=MS.gene55606.t1.exon3;Parent=MS.gene55606.t1
chr6.2 CDS 18976805 18977067 18976805 ID=cds.MS.gene55606.t1;Parent=MS.gene55606.t1
Gene Sequence

>MS.gene55606

ATGGTCAAAAATAATAAAGGGAATTTTGGGGATGAGAGAAAGAACTTGTCAATGAAAGTTGACAAGGAAGAAAATGAGAAATTTGGGAACACCAAGCTTTCCATTAGAGGTCATTGGAGACCATCTGAAGATGCTAAGCTTAAAAAACTTGTTGATGAATTTGGTCCTCACAATTGGAACAACATTGCTGAACAAATACATGGAAGATCGGGTATAATCCTAAACTAGAACATAACAAATTTTATTTATTGAAATTTCAAAAAGATTACTAATTTTTTTTTTATATCAAAGTTGTCTTAATAATGTAAATAGTTAACTTTCATTTATTTATTTTTTTGACAAGAAGTTTTATTTAAAAAAAAAAATTGAATATTTTCAAAAGGTGCTTTTAATATATTTATTAAAATTGCATTAGTATTGTTTTTTGAATGAAATTCTCTTTAATTTGAATTATTTTTTTATATCGATTCTAACGCAATTGGTTGGTGCACAGTGATGATTTTGTTTTTTTTTTTTTTTTATGACAGTGTTATAATCATTTTTTTTATTTATTTTTTAAACATCTTGATGTTAGATTTAAATTGTGTTTTCAAGATTTATATTTAATTCATTTGTAATATTTTTTGAAGGAGTTTATGTAATGTAACATTTGAGTTTCCTTTTGTGATAATGGTAATTAAAGGGAAAAGTTGCAGATTAAGGTGGTGTAATCAGCTAGATCCTAGAATCAATAGAGCAGCTTTTAGTGAGGAAGAAGAGGAGAAGCTTTTGCATGCTCATACACTTCATGGTAACAAATGGTCACACATTTGCAAATTCTTTCCTGGAAGGACAGACAATGCACTGAAGAATCATTTTCATGTGATCATGGCTAGGAAGCAAAGGGAACTATTATCATCCATTTCAAGAAAGAGAAAGCTAACATTTCAAATCCCAGGAAAGAATAATGTAGCTAGCAAATCAGCCATCACAAATCCGTTTGATGAATCTAACTCAACTTGCACCAATCTCAACCTCACTACTAGGCCTTTGCTTAATTACCAAGCCTATGATTCACAAATGAGTATGCGTTGAATCCTTCACTTTAGCTTATCAAATGATTTTAAATATGAGAAATGCTAACTAGTGTCACAGGGATACTGATTAAGAAAGCCAAATATAGTAGTATTACATTGGAAATTGTGCGGTCAATGCCACAAAAGTGCAAAAAGAGTAATTTTCAACTTAAAACTTCATCTTTTGACTTCTTCAACCAGTGATCCGGGGACACTGGTTAGCATGACTCAAATATAGGTCTGCGGCCACGATATTCAATTGAAGTTGCATCGACCGCATTTAACAGCGATTATAATTTAAAACCTTTAAATTGCTTCAAAATTTTGTTATTTTCTCTCATGTCTTAATAAACACTAAATATCCTATATTAATTTATTTGACATATGCTATATATGACCATGTTGTTGATTTTTGTGTTTTATTTTTTTAGGCTTACTTATAGAAAGAAAGGTAGAAGTAGGGGACTATGGTTTTGCCAGAATTTGCAGTGCAATGAGAGGTTGTTCTCAAGGTCACATGGGAAAGCTTAAGAGTGTGGACCAATCCAATCATTCATATTCAAACTCAGAAGTTTCAGTATCTGAGTCAGTTGCAACAAACATGAACAATGAATCAATTTTGGGAGAAAGTGAAAATGTGAGAGATAAGATTAAGGTGTCATTTATTGACTTTCTTGGAGTAGGTGATACATAG
Protein sequence

>MS.gene55606.t1

MVKNNKGNFGDERKNLSMKVDKEENEKFGNTKLSIRGHWRPSEDAKLKKLVDEFGPHNWNNIAEQIHGRSGKSCRLRWCNQLDPRINRAAFSEEEEEKLLHAHTLHGNKWSHICKFFPGRTDNALKNHFHVIMARKQRELLSSISRKRKLTFQIPGKNNVASKSAITNPFDESNSTCTNLNLTTRPLLNYQAYDSQMSLLIERKVEVGDYGFARICSAMRGCSQGHMGKLKSVDQSNHSYSNSEVSVSESVATNMNNESILGESENVRDKIKVSFIDFLGVGDT