AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene56157

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56157.t1 MTR_5g039760 48.454 194 73 4 8 199 12 180 1.18e-50 174
MS.gene56157.t1 MTR_7g074790 52.353 170 61 3 6 174 10 160 3.02e-46 164
MS.gene56157.t1 MTR_6g051425 32.727 275 176 4 8 275 19 291 1.25e-40 152
MS.gene56157.t1 MTR_0402s0040 41.026 195 112 2 1 193 21 214 1.96e-39 152
MS.gene56157.t1 MTR_0558s0020 32.685 257 153 4 10 246 40 296 1.36e-36 139
MS.gene56157.t1 MTR_4g102720 40.361 166 65 2 6 171 7 138 1.64e-33 128
MS.gene56157.t1 MTR_7g061980 52.252 111 51 2 6 115 10 119 1.49e-30 116
MS.gene56157.t1 MTR_6g090505 32.456 228 138 3 42 253 11 238 7.58e-29 119
MS.gene56157.t1 MTR_8g446020 34.659 176 113 1 73 246 81 256 1.44e-27 112
MS.gene56157.t1 MTR_5g015480 44.882 127 68 1 1 125 51 177 3.18e-26 108
MS.gene56157.t1 MTR_1g070355 30.081 246 157 8 11 247 79 318 7.41e-24 106
MS.gene56157.t1 MTR_1g083640 28.261 230 145 4 12 221 57 286 8.55e-24 102
MS.gene56157.t1 MTR_7g446520 29.075 227 146 2 10 236 92 303 4.36e-22 98.2
MS.gene56157.t1 MTR_2g070590 41.818 110 62 1 1 108 12 121 6.01e-21 89.4
MS.gene56157.t1 MTR_2g099430 54.118 85 39 0 31 115 28 112 1.84e-20 87.8
MS.gene56157.t1 MTR_7g446510 29.885 174 122 0 81 254 156 329 1.60e-19 90.9
MS.gene56157.t1 MTR_1g008290 33.571 140 90 2 61 200 6 142 5.23e-19 84.7
MS.gene56157.t1 MTR_6g017200 43.564 101 55 1 1 99 53 153 6.78e-19 84.3
MS.gene56157.t1 MTR_4g067290 45.098 102 54 2 6 106 56 156 7.91e-19 86.7
MS.gene56157.t1 MTR_4g067290 45.098 102 54 2 6 106 56 156 8.12e-19 86.7
MS.gene56157.t1 MTR_4g067290 45.098 102 54 2 6 106 76 176 1.76e-18 86.3
MS.gene56157.t1 MTR_4g067290 45.098 102 54 2 6 106 76 176 1.83e-18 85.9
MS.gene56157.t1 MTR_4g067290 45.098 102 54 2 6 106 74 174 1.83e-18 85.9
MS.gene56157.t1 MTR_4g035820 24.860 358 236 11 2 342 71 412 1.86e-18 90.1
MS.gene56157.t1 MTR_4g067290 45.098 102 54 2 6 106 116 216 2.66e-18 86.3
MS.gene56157.t1 MTR_1g057920 44.211 95 51 1 1 93 29 123 3.32e-18 81.3
MS.gene56157.t1 MTR_1g086270 36.585 82 52 0 300 381 1 82 7.84e-18 79.7
MS.gene56157.t1 MTR_8g067580 62.687 67 9 1 61 127 1 51 1.14e-17 78.2
MS.gene56157.t1 MTR_7g446480 29.310 174 123 0 81 254 141 314 3.10e-17 83.6
MS.gene56157.t1 MTR_5g076070 24.576 236 171 4 3 234 50 282 1.66e-16 80.9
MS.gene56157.t1 MTR_2g098920 42.157 102 57 2 6 106 80 180 2.69e-16 79.7
MS.gene56157.t1 MTR_0337s0040 31.469 143 96 1 73 213 82 224 4.19e-16 78.6
MS.gene56157.t1 MTR_2g014100 29.082 196 119 5 12 187 50 245 4.22e-16 79.0
MS.gene56157.t1 MTR_7g113010 39.370 127 61 2 6 130 457 569 2.02e-15 80.1
MS.gene56157.t1 MTR_3g006370 36.719 128 79 2 6 131 50 177 1.08e-14 74.3
MS.gene56157.t1 MTR_1g019850 32.090 134 82 2 6 137 70 196 4.03e-14 72.8
MS.gene56157.t1 MTR_3g058090 34.127 126 59 3 463 588 5 106 9.26e-14 68.2
MS.gene56157.t1 MTR_6g022080 30.612 147 97 3 18 160 97 242 5.97e-13 69.7
MS.gene56157.t1 MTR_2g098880 38.182 110 65 2 3 109 58 167 6.44e-13 69.7
MS.gene56157.t1 MTR_2g098880 38.182 110 65 2 3 109 70 179 7.48e-13 69.7
MS.gene56157.t1 MTR_4g076000 68.293 41 13 0 76 116 4 44 5.16e-12 63.2
MS.gene56157.t1 MTR_1g013060 27.404 208 138 7 6 204 24 227 6.38e-12 66.2
MS.gene56157.t1 MTR_6g022070 24.576 236 147 9 300 521 1 219 1.52e-11 66.6
MS.gene56157.t1 MTR_0734s0010 29.775 178 94 7 456 610 2 171 7.34e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56157.t1 AT4G38180 33.007 409 269 4 6 410 73 480 1.87e-78 266
MS.gene56157.t1 AT3G22170 27.724 624 325 11 6 536 70 660 1.62e-74 256
MS.gene56157.t1 AT3G22170 27.724 624 325 11 6 536 70 660 1.62e-74 256
MS.gene56157.t1 AT4G15090 32.258 403 270 3 6 406 51 452 2.85e-72 249
MS.gene56157.t1 AT4G15090 27.660 188 120 4 430 608 551 731 5.89e-13 72.8
MS.gene56157.t1 AT4G15090 32.258 403 270 3 6 406 51 452 2.85e-72 249
MS.gene56157.t1 AT4G15090 27.660 188 120 4 430 608 551 731 5.89e-13 72.8
MS.gene56157.t1 AT4G15090 32.258 403 270 3 6 406 51 452 2.85e-72 249
MS.gene56157.t1 AT4G15090 27.660 188 120 4 430 608 551 731 5.89e-13 72.8
MS.gene56157.t1 AT4G15090 32.258 403 270 3 6 406 51 452 2.85e-72 249
MS.gene56157.t1 AT4G15090 27.660 188 120 4 430 608 551 731 5.89e-13 72.8
MS.gene56157.t1 AT4G15090 32.258 403 270 3 6 406 51 452 2.85e-72 249
MS.gene56157.t1 AT4G15090 27.660 188 120 4 430 608 551 731 5.89e-13 72.8
MS.gene56157.t1 AT1G76320 31.529 425 273 7 10 432 1 409 6.01e-59 210
MS.gene56157.t1 AT1G76320 31.481 432 278 7 10 439 1 416 1.01e-58 211
MS.gene56157.t1 AT1G76320 31.481 432 278 7 10 439 1 416 1.17e-58 210
MS.gene56157.t1 AT1G76320 31.481 432 278 7 10 439 1 416 1.17e-58 210
MS.gene56157.t1 AT3G06250 30.303 396 233 6 3 397 187 540 1.95e-57 207
MS.gene56157.t1 AT3G06250 36.275 102 51 2 6 106 28 116 4.16e-12 70.1
MS.gene56157.t1 AT3G06250 33.036 112 72 1 436 547 652 760 7.73e-12 68.9
MS.gene56157.t1 AT3G06250 30.303 396 233 6 3 397 187 540 1.95e-57 207
MS.gene56157.t1 AT3G06250 36.275 102 51 2 6 106 28 116 4.16e-12 70.1
MS.gene56157.t1 AT3G06250 33.036 112 72 1 436 547 652 760 7.73e-12 68.9
MS.gene56157.t1 AT3G06250 30.303 396 233 6 3 397 187 540 1.95e-57 207
MS.gene56157.t1 AT3G06250 36.275 102 51 2 6 106 28 116 4.16e-12 70.1
MS.gene56157.t1 AT3G06250 33.036 112 72 1 436 547 652 760 7.73e-12 68.9
MS.gene56157.t1 AT2G27110 30.402 398 247 6 6 401 49 418 1.96e-55 203
MS.gene56157.t1 AT2G27110 35.849 106 65 1 446 551 537 639 1.77e-12 71.2
MS.gene56157.t1 AT2G27110 30.402 398 247 6 6 401 49 418 1.96e-55 203
MS.gene56157.t1 AT2G27110 35.849 106 65 1 446 551 537 639 1.77e-12 71.2
MS.gene56157.t1 AT5G18960 27.930 401 243 7 1 397 206 564 5.23e-52 192
MS.gene56157.t1 AT5G18960 36.275 102 51 2 6 106 43 131 4.86e-12 69.7
MS.gene56157.t1 AT5G18960 33.036 112 72 1 436 547 676 784 2.01e-11 67.8
MS.gene56157.t1 AT5G18960 27.930 401 243 7 1 397 206 564 5.23e-52 192
MS.gene56157.t1 AT5G18960 36.275 102 51 2 6 106 43 131 4.86e-12 69.7
MS.gene56157.t1 AT5G18960 33.036 112 72 1 436 547 676 784 2.01e-11 67.8
MS.gene56157.t1 AT2G32250 27.447 470 245 11 186 577 135 586 1.41e-48 182
MS.gene56157.t1 AT2G32250 27.447 470 245 11 186 577 135 586 1.45e-48 182
MS.gene56157.t1 AT2G32250 27.447 470 245 11 186 577 176 627 1.87e-48 182
MS.gene56157.t1 AT2G32250 27.447 470 245 11 186 577 176 627 2.45e-48 182
MS.gene56157.t1 AT2G32250 27.447 470 245 11 186 577 176 627 2.45e-48 182
MS.gene56157.t1 AT2G32250 27.447 470 245 11 186 577 176 627 2.46e-48 182
MS.gene56157.t1 AT2G32250 27.447 470 245 11 186 577 176 627 2.46e-48 182
MS.gene56157.t1 AT2G32250 27.447 470 245 11 186 577 176 627 2.46e-48 182
MS.gene56157.t1 AT1G52520 29.723 397 256 9 6 397 85 463 3.58e-46 174
MS.gene56157.t1 AT4G19990 26.024 415 252 5 9 406 24 400 1.27e-45 173
MS.gene56157.t1 AT4G19990 34.234 111 69 2 436 546 507 613 8.50e-12 68.9
MS.gene56157.t1 AT4G19990 26.024 415 252 5 9 406 24 400 1.27e-45 173
MS.gene56157.t1 AT4G19990 34.234 111 69 2 436 546 507 613 8.50e-12 68.9
MS.gene56157.t1 AT4G19990 26.024 415 252 5 9 406 24 400 1.37e-45 173
MS.gene56157.t1 AT4G19990 34.234 111 69 2 436 546 507 613 9.10e-12 68.9
MS.gene56157.t1 AT4G19990 26.341 410 247 5 9 401 38 409 1.43e-45 173
MS.gene56157.t1 AT4G19990 34.234 111 69 2 436 546 521 627 9.77e-12 68.9
MS.gene56157.t1 AT4G19990 26.024 415 252 5 9 406 24 400 3.13e-45 172
MS.gene56157.t1 AT4G19990 34.234 111 69 2 436 546 507 613 8.94e-12 68.9
MS.gene56157.t1 AT4G19990 26.024 415 252 5 9 406 24 400 3.13e-45 172
MS.gene56157.t1 AT4G19990 34.234 111 69 2 436 546 507 613 8.94e-12 68.9
MS.gene56157.t1 AT2G27110 32.218 239 162 0 163 401 35 273 5.82e-45 171
MS.gene56157.t1 AT2G27110 35.849 106 65 1 446 551 392 494 1.56e-12 71.2
MS.gene56157.t1 AT1G80010 27.027 407 267 7 6 396 95 487 9.10e-45 171
MS.gene56157.t1 AT1G10240 25.285 439 314 7 5 431 47 483 2.21e-43 166
MS.gene56157.t1 AT1G10240 25.285 439 314 7 5 431 47 483 2.21e-43 166
MS.gene56157.t1 AT4G19990 26.287 369 217 5 50 401 8 338 2.39e-40 157
MS.gene56157.t1 AT4G19990 34.234 111 69 2 436 546 450 556 8.46e-12 68.9
MS.gene56157.t1 AT5G28530 24.000 425 299 10 2 407 51 470 1.13e-34 140
MS.gene56157.t1 AT5G28530 24.000 425 299 10 2 407 51 470 1.18e-34 140
MS.gene56157.t1 AT5G28530 24.000 425 299 10 2 407 51 470 1.18e-34 140
MS.gene56157.t1 AT4G38170 29.302 215 147 2 180 393 18 228 5.95e-33 134
MS.gene56157.t1 AT3G59470 43.137 102 56 2 6 106 70 170 1.54e-17 83.2
MS.gene56157.t1 AT3G59470 43.137 102 56 2 6 106 70 170 1.54e-17 83.2
MS.gene56157.t1 AT3G59470 43.137 102 56 2 6 106 82 182 2.08e-17 83.2
MS.gene56157.t1 AT5G28530 21.602 412 262 14 2 407 51 407 1.12e-16 84.3
MS.gene56157.t1 AT5G28530 21.602 412 262 14 2 407 51 407 1.52e-16 84.0
MS.gene56157.t1 AT3G07500 37.692 130 68 3 6 122 33 162 5.77e-14 72.0
MS.gene56157.t1 AT2G43280 35.156 128 81 2 6 131 22 149 2.07e-13 70.1
MS.gene56157.t1 AT4G12850 36.290 124 73 3 6 126 11 131 1.06e-11 63.5
MS.gene56157.t1 AT4G12850 36.111 108 65 2 6 112 11 115 3.36e-11 62.0

Find 119 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAAATCACAAATGTATTT+TGG 0.093989 7.4:-79994096 MS.gene56157:CDS
ATCTTAGATTATGGATATTT+TGG 0.112546 7.4:-79994058 MS.gene56157:CDS
TCGTTGTGTTATAGATAATT+TGG 0.139441 7.4:+79992509 None:intergenic
AGACAACGTAACATGGTTTA+TGG 0.229294 7.4:-79994205 MS.gene56157:CDS
TGTAGAAAGTTTGAGACTTT+TGG 0.232605 7.4:-79992675 MS.gene56157:CDS
TAGTTTCACTAGATTATTAA+TGG 0.236771 7.4:-79992015 MS.gene56157:intron
TAGATGAAGCTTGGCAGTTT+TGG 0.257858 7.4:-79994672 MS.gene56157:CDS
CAATAAGGAAGGAGAGTTTA+AGG 0.264884 7.4:-79992751 MS.gene56157:CDS
CTCTTTAAGATGTATTGTTC+AGG 0.314178 7.4:+79992597 None:intergenic
CTTGATCTGTGAACAAAGTT+TGG 0.328870 7.4:+79993849 None:intergenic
TTGATCTGTGAACAAAGTTT+GGG 0.334950 7.4:+79993850 None:intergenic
CGTTGTGTTATAGATAATTT+GGG 0.337324 7.4:+79992510 None:intergenic
TGTCATCACCTTGGTCAATA+AGG 0.339628 7.4:-79992766 MS.gene56157:CDS
CCCTTTGTTGTTGTCTCAAT+CGG 0.342287 7.4:+79992312 None:intergenic
AAATGACAACGCCTCTATAA+TGG 0.349642 7.4:+79993960 None:intergenic
GACAAAAGCGATTCAAAAGT+TGG 0.351490 7.4:-79992263 MS.gene56157:CDS
GAAGTCGATGTATGCTATTA+AGG 0.356692 7.4:-79993594 MS.gene56157:CDS
GTTGAGTATGGTAAAGAAAC+TGG 0.361914 7.4:-79994649 MS.gene56157:CDS
TTAATGTCAATGAAAACAAT+TGG 0.375010 7.4:-79993619 MS.gene56157:CDS
TATCTATAACACAACGATAT+AGG 0.379751 7.4:-79992503 MS.gene56157:CDS
AACAAACCTGCATGATCTAA+TGG 0.380924 7.4:+79994579 None:intergenic
TCAGTCCTTGTTTCAGCTCT+AGG 0.400631 7.4:+79994502 None:intergenic
GACAACGTAACATGGTTTAT+GGG 0.404346 7.4:-79994204 MS.gene56157:CDS
AACTGGCTTTGGTGTTAGAA+AGG 0.408770 7.4:-79994632 MS.gene56157:CDS
CAACGGTCTATTAGCATGAT+TGG 0.417084 7.4:+79994003 None:intergenic
TTGCTCAACAATGATTAGAT+TGG 0.418493 7.4:-79992475 MS.gene56157:CDS
CATAACCCATGTCGAGTCTC+TGG 0.431181 7.4:+79993791 None:intergenic
ATCTTTCAAATGGTTATTTG+AGG 0.432948 7.4:-79993903 MS.gene56157:CDS
GACATATTCAAATGGAAGTT+GGG 0.434310 7.4:+79992785 None:intergenic
ATTGCACTTAGTTCAAAGAA+TGG 0.438544 7.4:-79994466 MS.gene56157:CDS
CCATGCACTCAAGATCTTTG+AGG 0.440135 7.4:-79992640 MS.gene56157:CDS
CTTCGTCTTGTCATCAATCA+AGG 0.445012 7.4:-79992203 MS.gene56157:CDS
CTAGTGCTTTAGACATTGCC+TGG 0.451171 7.4:+79993825 None:intergenic
AGGAGAAGTTTGAGACAGCT+TGG 0.459277 7.4:-79993661 MS.gene56157:CDS
TGACATATTCAAATGGAAGT+TGG 0.461065 7.4:+79992784 None:intergenic
GGACTCTGGTTTGAGGCAAA+AGG 0.461228 7.4:-79994317 MS.gene56157:CDS
TCAGGCTTTAACCATTATAG+AGG 0.461587 7.4:-79993971 MS.gene56157:CDS
GCAGGTGGTAGAACTAATCT+TGG 0.464714 7.4:-79994268 MS.gene56157:CDS
CAGATCGTCTTTCAGACATC+AGG 0.469794 7.4:-79992080 MS.gene56157:CDS
ACTAAATAAGATCTCTTGTC+CGG 0.469862 7.4:+79994532 None:intergenic
TAATGTCAATGAAAACAATT+GGG 0.472275 7.4:-79993618 MS.gene56157:CDS
CCGATTGAGACAACAACAAA+GGG 0.474960 7.4:-79992312 MS.gene56157:CDS
TCTTTAAGATGTATTGTTCA+GGG 0.480129 7.4:+79992598 None:intergenic
AAACTGCTGAATCTTTCAAA+TGG 0.482492 7.4:-79993913 MS.gene56157:CDS
ATTGAAATGGCAGAGGACTC+TGG 0.482937 7.4:-79994331 MS.gene56157:CDS
CAAGACGAAGGTTGTACAAT+CGG 0.487830 7.4:+79992216 None:intergenic
CAACAAAGGGGTATAAGAAT+CGG 0.493185 7.4:-79992299 MS.gene56157:CDS
TCAAGCATATGAGATTGAAA+TGG 0.499950 7.4:-79994344 MS.gene56157:CDS
GTTTGAGATAACTCATGTGC+TGG 0.505179 7.4:+79992047 None:intergenic
TGGCAGAGGACTCTGGTTTG+AGG 0.506073 7.4:-79994324 MS.gene56157:CDS
GAAGCTGTAAATCGTGGTTA+TGG 0.510351 7.4:+79994413 None:intergenic
CATGCCAACACTAGGTATAG+TGG 0.514325 7.4:+79994708 None:intergenic
TTGATAGTGTAGATGAAGCT+TGG 0.514856 7.4:-79994681 MS.gene56157:CDS
CTCGACATGGGTTATGTACA+TGG 0.515437 7.4:-79993784 MS.gene56157:CDS
AGGTTTGTTTGTTGCAAGGA+GGG 0.516993 7.4:-79994565 MS.gene56157:CDS
CAGGTTTGTTTGTTGCAAGG+AGG 0.519394 7.4:-79994566 MS.gene56157:CDS
TATGGTCCTTCACAAACTCA+TGG 0.520238 7.4:+79994431 None:intergenic
AACATGGTTTATGGGGAAGT+TGG 0.523724 7.4:-79994196 MS.gene56157:CDS
CACTATACCTAGTGTTGGCA+TGG 0.524699 7.4:-79994707 MS.gene56157:CDS
GAGAGTTTAAGGAAGGAGAG+TGG 0.525939 7.4:-79992740 MS.gene56157:CDS
TTTGTTGCAAGGAGGGTCAT+CGG 0.529632 7.4:-79994558 MS.gene56157:CDS
ATGCAGGTTTGTTTGTTGCA+AGG 0.530015 7.4:-79994569 MS.gene56157:CDS
AAGGTGATGACATATTCAAA+TGG 0.530069 7.4:+79992777 None:intergenic
CCTCAAAGATCTTGAGTGCA+TGG 0.530879 7.4:+79992640 None:intergenic
AAGGAAGGAGAGTTTAAGGA+AGG 0.532049 7.4:-79992747 MS.gene56157:CDS
TCTGCAAGTTCATATAATGT+AGG 0.534767 7.4:+79992432 None:intergenic
CAAGGAGGGTCATCGGATGC+CGG 0.535041 7.4:-79994551 MS.gene56157:CDS
TTCATATAATGTAGGAGATG+TGG 0.544666 7.4:+79992440 None:intergenic
CTGAACAATACATCTTAAAG+AGG 0.548534 7.4:-79992596 MS.gene56157:CDS
TATGGTAAAGAAACTGGCTT+TGG 0.553868 7.4:-79994643 MS.gene56157:CDS
CATGTATGATTATGATCAAG+AGG 0.554480 7.4:-79993681 MS.gene56157:CDS
ATTTGAATATGTCATCACCT+TGG 0.557581 7.4:-79992775 MS.gene56157:CDS
TGGTATTATATATGATGCAA+AGG 0.557791 7.4:-79992553 MS.gene56157:CDS
ACAACTCCATTAGATCATGC+AGG 0.558799 7.4:-79994585 MS.gene56157:CDS
ATATGATGCAAAGGAAAATG+AGG 0.561756 7.4:-79992544 MS.gene56157:CDS
TGCAAAGGAAAATGAGGTTG+TGG 0.564561 7.4:-79992538 MS.gene56157:CDS
ATGAAGGAAGCATTCACTCT+AGG 0.565288 7.4:-79993551 MS.gene56157:CDS
TGAGACAGCTTGGAGCAAGT+TGG 0.566720 7.4:-79993651 MS.gene56157:CDS
GCTAGCTTGTGTGTTGTCTG+TGG 0.571863 7.4:+79994391 None:intergenic
AACAATACATCTTAAAGAGG+TGG 0.575288 7.4:-79992593 MS.gene56157:CDS
TGTAATCCATGAGTTTGTGA+AGG 0.578123 7.4:-79994437 MS.gene56157:CDS
AGCAAGAAGACAACGTAACA+TGG 0.579143 7.4:-79994212 MS.gene56157:CDS
TAATCTTGGATATACACGGT+TGG 0.580985 7.4:-79994254 MS.gene56157:CDS
TGAAGTTGGTGTTCCGACAT+TGG 0.586077 7.4:-79992340 MS.gene56157:CDS
CAACTTATGAGTGCACAAGC+AGG 0.586209 7.4:-79994286 MS.gene56157:CDS
ACATGGCACTTGATTCAGAA+TGG 0.587501 7.4:-79993767 MS.gene56157:CDS
TCAAACTCCATGCCAACACT+AGG 0.589517 7.4:+79994700 None:intergenic
CTCTCCTTCCTTATTGACCA+AGG 0.589663 7.4:+79992758 None:intergenic
ATGGGCAGCATGTCACATGA+AGG 0.590749 7.4:-79993567 MS.gene56157:CDS
ACAACGTAACATGGTTTATG+GGG 0.591002 7.4:-79994203 MS.gene56157:CDS
ATCACCTTGGTCAATAAGGA+AGG 0.592999 7.4:-79992762 MS.gene56157:CDS
CAGAATGGTATAAAACACCT+TGG 0.593491 7.4:-79993752 MS.gene56157:CDS
GCAACGGTCAATGATGAAGT+TGG 0.600961 7.4:-79992354 MS.gene56157:CDS
CAATCATGCTAATAGACCGT+TGG 0.608792 7.4:-79994002 MS.gene56157:CDS
TGTAGGAGATGTGGATACAT+CGG 0.609926 7.4:+79992449 None:intergenic
ATATGAGATTGAAATGGCAG+AGG 0.610938 7.4:-79994338 MS.gene56157:CDS
ACAACCACTATACCTAGTGT+TGG 0.612031 7.4:-79994712 MS.gene56157:CDS
TTCGTCTTGTCATCAATCAA+GGG 0.613908 7.4:-79992202 MS.gene56157:intron
CATGATATAGATGACTGTGC+AGG 0.616108 7.4:+79992702 None:intergenic
TGATCTGTGAACAAAGTTTG+GGG 0.616827 7.4:+79993851 None:intergenic
GAGTCAATTGAACATGAATG+AGG 0.618296 7.4:-79991910 None:intergenic
GAGGTATTTCTTGAAGCACA+TGG 0.618467 7.4:-79993884 MS.gene56157:CDS
AGAATCCTAGAGCTGAAACA+AGG 0.627112 7.4:-79994507 MS.gene56157:CDS
ACCGATTGAGACAACAACAA+AGG 0.632586 7.4:-79992313 MS.gene56157:CDS
GTGATGCCAGAGACTCGACA+TGG 0.639006 7.4:-79993797 MS.gene56157:CDS
TGGACAAGAGATGCACGCAA+TGG 0.649539 7.4:-79992573 MS.gene56157:CDS
AAGGGGTATAAGAATCGGCG+TGG 0.650761 7.4:-79992294 MS.gene56157:CDS
AAGCCTGAAAACAATGCCAA+CGG 0.656439 7.4:+79993986 None:intergenic
TCAATCGGTTCAGCCAATGT+CGG 0.659221 7.4:+79992327 None:intergenic
CGTCTTTCAGACATCAGGTG+TGG 0.666655 7.4:-79992075 MS.gene56157:CDS
CTTATGAGTGCACAAGCAGG+TGG 0.669554 7.4:-79994283 MS.gene56157:CDS
AGGGGTATAAGAATCGGCGT+GGG 0.674899 7.4:-79992293 MS.gene56157:CDS
TAGACTAGAACAAAATGCAA+CGG 0.678964 7.4:-79992370 MS.gene56157:CDS
CTTGATTGATGACAAGACGA+AGG 0.695787 7.4:+79992204 None:intergenic
GAACTAATCTTGGATATACA+CGG 0.698243 7.4:-79994258 MS.gene56157:CDS
TTTGTTCACAGATCAAGACC+AGG 0.702976 7.4:-79993843 MS.gene56157:CDS
TGATGCCAGAGACTCGACAT+GGG 0.714570 7.4:-79993796 MS.gene56157:CDS
CGATTGAGACAACAACAAAG+GGG 0.733862 7.4:-79992311 MS.gene56157:CDS
TCTGTGGAAGCTGTAAATCG+TGG 0.747227 7.4:+79994407 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTTAAAATCATTGA+AGG - chr7.4:79994510-79994529 MS.gene56157:CDS 10.0%
!! AAAATAAGGAAAATTCATTA+TGG + chr7.4:79993792-79993811 None:intergenic 15.0%
!! ATTATGGAATTTGTCAAAAA+TGG + chr7.4:79993776-79993795 None:intergenic 20.0%
!! TAATGTCAATGAAAACAATT+GGG - chr7.4:79993009-79993028 MS.gene56157:intron 20.0%
!! TAGTTTCACTAGATTATTAA+TGG - chr7.4:79994612-79994631 MS.gene56157:CDS 20.0%
!! TTAATGTCAATGAAAACAAT+TGG - chr7.4:79993008-79993027 MS.gene56157:intron 20.0%
!!! AACAAATCACAAATGTATTT+TGG - chr7.4:79992531-79992550 MS.gene56157:CDS 20.0%
!!! ACAAATCACAAATGTATTTT+GGG - chr7.4:79992532-79992551 MS.gene56157:CDS 20.0%
!!! ATCTTAGATTATGGATATTT+TGG - chr7.4:79992569-79992588 MS.gene56157:CDS 20.0%
!!! TGTGTATATGTTTTTAATGT+AGG - chr7.4:79994695-79994714 MS.gene56157:CDS 20.0%
!!! TTTTTAAAATCATTGAAGGT+TGG - chr7.4:79994514-79994533 MS.gene56157:CDS 20.0%
! AAATCAGTAACATTGATGTT+TGG + chr7.4:79993613-79993632 None:intergenic 25.0%
! ATCTTTCAAATGGTTATTTG+AGG - chr7.4:79992724-79992743 MS.gene56157:CDS 25.0%
! CGTTGTGTTATAGATAATTT+GGG + chr7.4:79994120-79994139 None:intergenic 25.0%
! GCAAAAATGATCTTAGATTA+TGG - chr7.4:79992560-79992579 MS.gene56157:CDS 25.0%
! GTATGCTATTAAGGAAAAAT+GGG - chr7.4:79993042-79993061 MS.gene56157:intron 25.0%
! TACACAGTATCATAAAAAGT+TGG + chr7.4:79994681-79994700 None:intergenic 25.0%
! TATCTATAACACAACGATAT+AGG - chr7.4:79994124-79994143 MS.gene56157:CDS 25.0%
! TCGTTGTGTTATAGATAATT+TGG + chr7.4:79994121-79994140 None:intergenic 25.0%
! TGGTATTATATATGATGCAA+AGG - chr7.4:79994074-79994093 MS.gene56157:CDS 25.0%
! TGTATGCTATTAAGGAAAAA+TGG - chr7.4:79993041-79993060 MS.gene56157:intron 25.0%
! TTATTAATGGTAAGATTCCT+TGG - chr7.4:79994625-79994644 MS.gene56157:CDS 25.0%
!! CTTGAACTTCAGATATTTTA+CGG + chr7.4:79992268-79992287 None:intergenic 25.0%
!! GAGTTTGAATTCTGATTTTA+AGG - chr7.4:79993123-79993142 MS.gene56157:intron 25.0%
!!! TCTTTAAGATGTATTGTTCA+GGG + chr7.4:79994032-79994051 None:intergenic 25.0%
AAACTGCTGAATCTTTCAAA+TGG - chr7.4:79992714-79992733 MS.gene56157:CDS 30.0%
AACAATACATCTTAAAGAGG+TGG - chr7.4:79994034-79994053 MS.gene56157:CDS 30.0%
AAGGTGATGACATATTCAAA+TGG + chr7.4:79993853-79993872 None:intergenic 30.0%
ACTAAATAAGATCTCTTGTC+CGG + chr7.4:79992098-79992117 None:intergenic 30.0%
ATATGATGCAAAGGAAAATG+AGG - chr7.4:79994083-79994102 MS.gene56157:CDS 30.0%
ATTGCACTTAGTTCAAAGAA+TGG - chr7.4:79992161-79992180 MS.gene56157:intron 30.0%
ATTTGAATATGTCATCACCT+TGG - chr7.4:79993852-79993871 MS.gene56157:CDS 30.0%
CATGTATGATTATGATCAAG+AGG - chr7.4:79992946-79992965 MS.gene56157:intron 30.0%
CCTTGGTCTATAAAAAGTAA+TGG - chr7.4:79994642-79994661 MS.gene56157:CDS 30.0%
CTGAACAATACATCTTAAAG+AGG - chr7.4:79994031-79994050 MS.gene56157:CDS 30.0%
GAAAAAAGGAAGTCATTTCT+TGG - chr7.4:79992907-79992926 MS.gene56157:intron 30.0%
GAACTAATCTTGGATATACA+CGG - chr7.4:79992369-79992388 MS.gene56157:CDS 30.0%
GAATGGCTGTATATCAAATT+TGG + chr7.4:79993715-79993734 None:intergenic 30.0%
GACATATTCAAATGGAAGTT+GGG + chr7.4:79993845-79993864 None:intergenic 30.0%
TAGACTAGAACAAAATGCAA+CGG - chr7.4:79994257-79994276 MS.gene56157:CDS 30.0%
TCAAGCATATGAGATTGAAA+TGG - chr7.4:79992283-79992302 MS.gene56157:CDS 30.0%
TCTGCAAGTTCATATAATGT+AGG + chr7.4:79994198-79994217 None:intergenic 30.0%
TGACATATTCAAATGGAAGT+TGG + chr7.4:79993846-79993865 None:intergenic 30.0%
TGATGTGCATGAAAAAATGA+AGG + chr7.4:79992497-79992516 None:intergenic 30.0%
TTCATATAATGTAGGAGATG+TGG + chr7.4:79994190-79994209 None:intergenic 30.0%
TTGATCTGTGAACAAAGTTT+GGG + chr7.4:79992780-79992799 None:intergenic 30.0%
TTGCTCAACAATGATTAGAT+TGG - chr7.4:79994152-79994171 MS.gene56157:CDS 30.0%
! AAGAAGATGCATCTTCTTTT+CGG - chr7.4:79993336-79993355 MS.gene56157:intron 30.0%
! AAGAAGATGCATCTTCTTTT+CGG + chr7.4:79993355-79993336 None:intergenic 30.0%
! CTTGGTAACTTGATGAAAAA+AGG - chr7.4:79992893-79992912 MS.gene56157:intron 30.0%
! TGACTTGTGTAAAAAAGTGA+TGG - chr7.4:79994230-79994249 MS.gene56157:CDS 30.0%
!! CTCTTTAAGATGTATTGTTC+AGG + chr7.4:79994033-79994052 None:intergenic 30.0%
!! TGTAGAAAGTTTGAGACTTT+TGG - chr7.4:79993952-79993971 MS.gene56157:CDS 30.0%
!!! AGATTATGGATATTTTGGTG+AGG - chr7.4:79992574-79992593 MS.gene56157:CDS 30.0%
!!! ATTTTTTCATGCACATCAGA+TGG - chr7.4:79992499-79992518 MS.gene56157:CDS 30.0%
!!! CCATTACTTTTTATAGACCA+AGG + chr7.4:79994645-79994664 None:intergenic 30.0%
!!! CTTTTTTCATCAAGTTACCA+AGG + chr7.4:79992895-79992914 None:intergenic 30.0%
AAATGACAACGCCTCTATAA+TGG + chr7.4:79992670-79992689 None:intergenic 35.0%
AACAAACCTGCATGATCTAA+TGG + chr7.4:79992051-79992070 None:intergenic 35.0%
ACAACGTAACATGGTTTATG+GGG - chr7.4:79992424-79992443 MS.gene56157:CDS 35.0%
AGACAACGTAACATGGTTTA+TGG - chr7.4:79992422-79992441 MS.gene56157:CDS 35.0%
ATATGAGATTGAAATGGCAG+AGG - chr7.4:79992289-79992308 MS.gene56157:CDS 35.0%
CAATAAGGAAGGAGAGTTTA+AGG - chr7.4:79993876-79993895 MS.gene56157:CDS 35.0%
CAGAATGGTATAAAACACCT+TGG - chr7.4:79992875-79992894 MS.gene56157:intron 35.0%
CTTGATCTGTGAACAAAGTT+TGG + chr7.4:79992781-79992800 None:intergenic 35.0%
CTTGTGTAAAAAAGTGATGG+AGG - chr7.4:79994233-79994252 MS.gene56157:CDS 35.0%
GAAGTCGATGTATGCTATTA+AGG - chr7.4:79993033-79993052 MS.gene56157:intron 35.0%
GACAAAAGCGATTCAAAAGT+TGG - chr7.4:79994364-79994383 MS.gene56157:CDS 35.0%
GACAACGTAACATGGTTTAT+GGG - chr7.4:79992423-79992442 MS.gene56157:CDS 35.0%
GCAATCCTAAAAAGCAGTTT+GGG - chr7.4:79993506-79993525 MS.gene56157:intron 35.0%
GTTGAGTATGGTAAAGAAAC+TGG - chr7.4:79991978-79991997 MS.gene56157:intron 35.0%
GTTGCACTAAAATTGGTGAA+TGG + chr7.4:79993732-79993751 None:intergenic 35.0%
TAATCTTGGATATACACGGT+TGG - chr7.4:79992373-79992392 MS.gene56157:CDS 35.0%
TATGCGAGCAGCTAAAAATA+AGG + chr7.4:79993806-79993825 None:intergenic 35.0%
TGATCTGTGAACAAAGTTTG+GGG + chr7.4:79992779-79992798 None:intergenic 35.0%
TGGAATTTGTCAAAAATGGC+AGG + chr7.4:79993772-79993791 None:intergenic 35.0%
TGTAATCCATGAGTTTGTGA+AGG - chr7.4:79992190-79992209 MS.gene56157:intron 35.0%
TTCGTCTTGTCATCAATCAA+GGG - chr7.4:79994425-79994444 MS.gene56157:CDS 35.0%
! AGAAGATGCATCTTCTTTTC+GGG + chr7.4:79993356-79993337 None:intergenic 35.0%
! CAACAAAGGGGTATAAGAAT+CGG - chr7.4:79994328-79994347 MS.gene56157:CDS 35.0%
! TATGGTAAAGAAACTGGCTT+TGG - chr7.4:79991984-79992003 MS.gene56157:intron 35.0%
! TCAGGCTTTAACCATTATAG+AGG - chr7.4:79992656-79992675 MS.gene56157:CDS 35.0%
!! AAAAGACTAGTGTTGGTTTG+TGG + chr7.4:79993196-79993215 None:intergenic 35.0%
!! AAAGACTAGTGTTGGTTTGT+GGG + chr7.4:79993195-79993214 None:intergenic 35.0%
!! CGAGTTAGTTTGTGAATATG+AGG - chr7.4:79993675-79993694 MS.gene56157:CDS 35.0%
!! TTGATAGTGTAGATGAAGCT+TGG - chr7.4:79991946-79991965 MS.gene56157:intron 35.0%
!!! AACATCCCAAACTGCTTTTT+AGG + chr7.4:79993514-79993533 None:intergenic 35.0%
!!! ATAGAGGCGTTGTCATTTTT+GGG - chr7.4:79992672-79992691 MS.gene56157:CDS 35.0%
!!! TATAGAGGCGTTGTCATTTT+TGG - chr7.4:79992671-79992690 MS.gene56157:CDS 35.0%
!!! TTATGGATATTTTGGTGAGG+TGG - chr7.4:79992577-79992596 MS.gene56157:CDS 35.0%
AACATGGTTTATGGGGAAGT+TGG - chr7.4:79992431-79992450 MS.gene56157:CDS 40.0%
AAGCCTGAAAACAATGCCAA+CGG + chr7.4:79992644-79992663 None:intergenic 40.0%
AAGGAAGGAGAGTTTAAGGA+AGG - chr7.4:79993880-79993899 MS.gene56157:CDS 40.0%
ACAACCACTATACCTAGTGT+TGG - chr7.4:79991915-79991934 MS.gene56157:intron 40.0%
ACAACTCCATTAGATCATGC+AGG - chr7.4:79992042-79992061 MS.gene56157:CDS 40.0%
ACATGGCACTTGATTCAGAA+TGG - chr7.4:79992860-79992879 MS.gene56157:intron 40.0%
ACCGATTGAGACAACAACAA+AGG - chr7.4:79994314-79994333 MS.gene56157:CDS 40.0%
AGAATCCTAGAGCTGAAACA+AGG - chr7.4:79992120-79992139 MS.gene56157:intron 40.0%
AGAATGGAAATGGGATGTTC+GGG + chr7.4:79993564-79993583 None:intergenic 40.0%
AGCAAGAAGACAACGTAACA+TGG - chr7.4:79992415-79992434 MS.gene56157:CDS 40.0%
ATCACCTTGGTCAATAAGGA+AGG - chr7.4:79993865-79993884 MS.gene56157:CDS 40.0%
CAACGGTCTATTAGCATGAT+TGG + chr7.4:79992627-79992646 None:intergenic 40.0%
CAAGACGAAGGTTGTACAAT+CGG + chr7.4:79994414-79994433 None:intergenic 40.0%
CAATCATGCTAATAGACCGT+TGG - chr7.4:79992625-79992644 MS.gene56157:CDS 40.0%
CAGAATGGAAATGGGATGTT+CGG + chr7.4:79993565-79993584 None:intergenic 40.0%
CATGATATAGATGACTGTGC+AGG + chr7.4:79993928-79993947 None:intergenic 40.0%
CCCATTTCCAGAATGGAAAT+GGG + chr7.4:79993573-79993592 None:intergenic 40.0%
CCGATTGAGACAACAACAAA+GGG - chr7.4:79994315-79994334 MS.gene56157:CDS 40.0%
CGATTGAGACAACAACAAAG+GGG - chr7.4:79994316-79994335 MS.gene56157:CDS 40.0%
CTTCGTCTTGTCATCAATCA+AGG - chr7.4:79994424-79994443 MS.gene56157:CDS 40.0%
GAAGCTGTAAATCGTGGTTA+TGG + chr7.4:79992217-79992236 None:intergenic 40.0%
GCTTAACTATGGAGTTCCTA+TGG + chr7.4:79993371-79993390 None:intergenic 40.0%
GGCAATCCTAAAAAGCAGTT+TGG - chr7.4:79993505-79993524 MS.gene56157:intron 40.0%
GTAACATCCCATTTCCAGAA+TGG + chr7.4:79993580-79993599 None:intergenic 40.0%
TATGGTCCTTCACAAACTCA+TGG + chr7.4:79992199-79992218 None:intergenic 40.0%
TCCCATTTCCAGAATGGAAA+TGG + chr7.4:79993574-79993593 None:intergenic 40.0%
TGCAAAGGAAAATGAGGTTG+TGG - chr7.4:79994089-79994108 MS.gene56157:CDS 40.0%
TGTAGGAGATGTGGATACAT+CGG + chr7.4:79994181-79994200 None:intergenic 40.0%
TGTCATCACCTTGGTCAATA+AGG - chr7.4:79993861-79993880 MS.gene56157:CDS 40.0%
TTTGTTCACAGATCAAGACC+AGG - chr7.4:79992784-79992803 MS.gene56157:CDS 40.0%
! AGATGAAGCTTGGCAGTTTT+GGG - chr7.4:79991956-79991975 MS.gene56157:intron 40.0%
! AGGTTTGTTTGTTGCAAGGA+GGG - chr7.4:79992062-79992081 MS.gene56157:CDS 40.0%
! ATGCAGGTTTGTTTGTTGCA+AGG - chr7.4:79992058-79992077 MS.gene56157:CDS 40.0%
! CAAACACTTTGAGAGAGTTG+TGG - chr7.4:79993636-79993655 MS.gene56157:CDS 40.0%
! CCCATTTCCATTCTGGAAAT+GGG - chr7.4:79993570-79993589 MS.gene56157:CDS 40.0%
! CTTGATTGATGACAAGACGA+AGG + chr7.4:79994426-79994445 None:intergenic 40.0%
! GAGGTATTTCTTGAAGCACA+TGG - chr7.4:79992743-79992762 MS.gene56157:CDS 40.0%
! GTTTGAGATAACTCATGTGC+TGG + chr7.4:79994583-79994602 None:intergenic 40.0%
! TAGATGAAGCTTGGCAGTTT+TGG - chr7.4:79991955-79991974 MS.gene56157:intron 40.0%
! TCCCATTTCCATTCTGGAAA+TGG - chr7.4:79993569-79993588 MS.gene56157:CDS 40.0%
! TGTACAATCGGAGCTCTTTT+AGG + chr7.4:79994402-79994421 None:intergenic 40.0%
! TTTTCGGTAGCTCAATCCAT+AGG - chr7.4:79993352-79993371 MS.gene56157:intron 40.0%
!! AAAAGACTCGTGTTGGTTTG+TGG - chr7.4:79993474-79993493 MS.gene56157:intron 40.0%
!! AAAGACTCGTGTTGGTTTGT+GGG - chr7.4:79993475-79993494 MS.gene56157:intron 40.0%
!! AACTGGCTTTGGTGTTAGAA+AGG - chr7.4:79991995-79992014 MS.gene56157:intron 40.0%
!! AAGACTAGTGTTGGTTTGTG+GGG + chr7.4:79993194-79993213 None:intergenic 40.0%
!! ATGAAGGAAGCATTCACTCT+AGG - chr7.4:79993076-79993095 MS.gene56157:intron 40.0%
!! CCCTTTGTTGTTGTCTCAAT+CGG + chr7.4:79994318-79994337 None:intergenic 40.0%
!! TAACATCCCAGACTGCTTTT+AGG - chr7.4:79993155-79993174 MS.gene56157:intron 40.0%
!!! TAGAGGCGTTGTCATTTTTG+GGG - chr7.4:79992673-79992692 MS.gene56157:CDS 40.0%
AAGCCAAGCACGCTTAACTA+TGG + chr7.4:79993382-79993401 None:intergenic 45.0%
ACTCCATAGTTAAGCGTGCT+TGG - chr7.4:79993376-79993395 MS.gene56157:intron 45.0%
AGGCAATCCTAAAAGCAGTC+TGG + chr7.4:79993165-79993184 None:intergenic 45.0%
ATAGTTAAGCGTGCTTGGCT+TGG - chr7.4:79993381-79993400 MS.gene56157:intron 45.0%
ATTGAAATGGCAGAGGACTC+TGG - chr7.4:79992296-79992315 MS.gene56157:CDS 45.0%
CAACTTATGAGTGCACAAGC+AGG - chr7.4:79992341-79992360 MS.gene56157:CDS 45.0%
CACGCTGAAAAGACTAGTGT+TGG + chr7.4:79993203-79993222 None:intergenic 45.0%
CAGATCGTCTTTCAGACATC+AGG - chr7.4:79994547-79994566 MS.gene56157:CDS 45.0%
CATGCCAACACTAGGTATAG+TGG + chr7.4:79991922-79991941 None:intergenic 45.0%
CATGCTGAAAAGACTCGTGT+TGG - chr7.4:79993467-79993486 MS.gene56157:intron 45.0%
CCATGCACTCAAGATCTTTG+AGG - chr7.4:79993987-79994006 MS.gene56157:CDS 45.0%
CCTCAAAGATCTTGAGTGCA+TGG + chr7.4:79993990-79994009 None:intergenic 45.0%
CGAACATCCCATTTCCATTC+TGG - chr7.4:79993563-79993582 MS.gene56157:CDS 45.0%
CTCTCCTTCCTTATTGACCA+AGG + chr7.4:79993872-79993891 None:intergenic 45.0%
GAATGGAAATGGGATGTTCG+GGG + chr7.4:79993563-79993582 None:intergenic 45.0%
GAGAGTTTAAGGAAGGAGAG+TGG - chr7.4:79993887-79993906 MS.gene56157:CDS 45.0%
GCAACGGTCAATGATGAAGT+TGG - chr7.4:79994273-79994292 MS.gene56157:CDS 45.0%
GCAGGTGGTAGAACTAATCT+TGG - chr7.4:79992359-79992378 MS.gene56157:CDS 45.0%
GCTTAACTGTGGAGTTCCTA+TGG - chr7.4:79993299-79993318 MS.gene56157:intron 45.0%
GCTTGGAGTAGTACTAGGAT+GGG - chr7.4:79993398-79993417 MS.gene56157:intron 45.0%
GCTTGGAGTAGTACTAGGAT+GGG + chr7.4:79993417-79993398 None:intergenic 45.0%
GGCAATCCTAAAAGCAGTCT+GGG + chr7.4:79993164-79993183 None:intergenic 45.0%
TCAAACTCCATGCCAACACT+AGG + chr7.4:79991930-79991949 None:intergenic 45.0%
TCTGTGGAAGCTGTAAATCG+TGG + chr7.4:79992223-79992242 None:intergenic 45.0%
TGCGCGAGTTGCACTAAAAT+TGG + chr7.4:79993739-79993758 None:intergenic 45.0%
TTACACTTGGTATCAGAGCC+TGG - chr7.4:79993532-79993551 MS.gene56157:CDS 45.0%
TTTGTTGCAAGGAGGGTCAT+CGG - chr7.4:79992069-79992088 MS.gene56157:CDS 45.0%
! ACACTTTGAGAGAGTTGTGG+AGG - chr7.4:79993639-79993658 MS.gene56157:CDS 45.0%
! AGACCGTTGGCATTGTTTTC+AGG - chr7.4:79992638-79992657 MS.gene56157:CDS 45.0%
! AGGAGAAGTTTGAGACAGCT+TGG - chr7.4:79992966-79992985 MS.gene56157:intron 45.0%
! CAGGTTTGTTTGTTGCAAGG+AGG - chr7.4:79992061-79992080 MS.gene56157:CDS 45.0%
! CTAGTGCTTTAGACATTGCC+TGG + chr7.4:79992805-79992824 None:intergenic 45.0%
! CTCGACATGGGTTATGTACA+TGG - chr7.4:79992843-79992862 MS.gene56157:intron 45.0%
! GCAGTTTGGGATGTTACACT+TGG - chr7.4:79993519-79993538 MS.gene56157:intron 45.0%
! TCAATCGGTTCAGCCAATGT+CGG + chr7.4:79994303-79994322 None:intergenic 45.0%
! TCAGTCCTTGTTTCAGCTCT+AGG + chr7.4:79992128-79992147 None:intergenic 45.0%
!! AAGACTCGTGTTGGTTTGTG+GGG - chr7.4:79993476-79993495 MS.gene56157:intron 45.0%
!! CACTATACCTAGTGTTGGCA+TGG - chr7.4:79991920-79991939 MS.gene56157:intron 45.0%
!! TGAAGTTGGTGTTCCGACAT+TGG - chr7.4:79994287-79994306 MS.gene56157:CDS 45.0%
!! TGTTGGTTTGTGGGGTTAGT+CGG - chr7.4:79993484-79993503 MS.gene56157:intron 45.0%
!! TTTTCGGGAGCTCAATCCAT+AGG + chr7.4:79993318-79993337 None:intergenic 45.0%
!!! TGGCAGTTTTGGGTTGAGTA+TGG - chr7.4:79991966-79991985 MS.gene56157:intron 45.0%
AAGCCAAGCACGCTTAACTG+TGG - chr7.4:79993288-79993307 MS.gene56157:intron 50.0%
ACAGTTAAGCGTGCTTGGCT+TGG + chr7.4:79993289-79993308 None:intergenic 50.0%
ACGCTTACCAGGAAACTTCC+CGG - chr7.4:79993239-79993258 MS.gene56157:intron 50.0%
ACTCCACAGTTAAGCGTGCT+TGG + chr7.4:79993294-79993313 None:intergenic 50.0%
ATGCTTACCGGGAAACTTCC+CGG + chr7.4:79993431-79993450 None:intergenic 50.0%
ATGGGCAGCATGTCACATGA+AGG - chr7.4:79993060-79993079 MS.gene56157:intron 50.0%
CATAACCCATGTCGAGTCTC+TGG + chr7.4:79992839-79992858 None:intergenic 50.0%
CGTCTTTCAGACATCAGGTG+TGG - chr7.4:79994552-79994571 MS.gene56157:CDS 50.0%
CTTATGAGTGCACAAGCAGG+TGG - chr7.4:79992344-79992363 MS.gene56157:CDS 50.0%
GGCTTGGAGTAGTACTAGGA+TGG - chr7.4:79993397-79993416 MS.gene56157:intron 50.0%
GGCTTGGAGTAGTACTAGGA+TGG + chr7.4:79993416-79993397 None:intergenic 50.0%
GTCCTCACTCACATGCTTAC+CGG + chr7.4:79993443-79993462 None:intergenic 50.0%
TACTAGGATGGGTGACCTAC+CGG - chr7.4:79993409-79993428 MS.gene56157:intron 50.0%
TACTAGGATGGGTGACCTAC+CGG + chr7.4:79993428-79993409 None:intergenic 50.0%
TCCTCACTCACATGCTTACC+GGG + chr7.4:79993442-79993461 None:intergenic 50.0%
TGAGACAGCTTGGAGCAAGT+TGG - chr7.4:79992976-79992995 MS.gene56157:intron 50.0%
TGATGCCAGAGACTCGACAT+GGG - chr7.4:79992831-79992850 MS.gene56157:intron 50.0%
TGGACAAGAGATGCACGCAA+TGG - chr7.4:79994054-79994073 MS.gene56157:CDS 50.0%
TTACCAGGAAACTTCCCGGT+AGG - chr7.4:79993243-79993262 MS.gene56157:intron 50.0%
! AAGGGGTATAAGAATCGGCG+TGG - chr7.4:79994333-79994352 MS.gene56157:CDS 50.0%
! AGGGGTATAAGAATCGGCGT+GGG - chr7.4:79994334-79994353 MS.gene56157:CDS 50.0%
! GCTAGCTTGTGTGTTGTCTG+TGG + chr7.4:79992239-79992258 None:intergenic 50.0%
! GGACTCTGGTTTGAGGCAAA+AGG - chr7.4:79992310-79992329 MS.gene56157:CDS 50.0%
!! GCTTGGCTTGGAGTAGTACT+AGG - chr7.4:79993393-79993412 MS.gene56157:intron 50.0%
!! GCTTGGCTTGGAGTAGTACT+AGG + chr7.4:79993412-79993393 None:intergenic 50.0%
!! GTTGGTTTGTGGGGTTAGTC+AGG + chr7.4:79993504-79993485 None:intergenic 50.0%
ACTAGGATGGGTGACCTACC+GGG - chr7.4:79993410-79993429 MS.gene56157:intron 55.0%
ACTAGGATGGGTGACCTACC+GGG + chr7.4:79993429-79993410 None:intergenic 55.0%
GTGATGCCAGAGACTCGACA+TGG - chr7.4:79992830-79992849 MS.gene56157:intron 55.0%
TCCCGGTAAGCATGTGAGTG+AGG - chr7.4:79993438-79993457 MS.gene56157:intron 55.0%
TGACCTACCGGGAAGTTTCC+CGG - chr7.4:79993421-79993440 MS.gene56157:intron 55.0%
TGACCTACCGGGAAGTTTCC+TGG + chr7.4:79993440-79993421 None:intergenic 55.0%
TTACCGGGAAACTTCCCGGT+AGG + chr7.4:79993427-79993446 None:intergenic 55.0%
! TGGCAGAGGACTCTGGTTTG+AGG - chr7.4:79992303-79992322 MS.gene56157:CDS 55.0%
CAAGGAGGGTCATCGGATGC+CGG - chr7.4:79992076-79992095 MS.gene56157:CDS 60.0%
TCCTCACTCGCACGCTTACC+AGG - chr7.4:79993228-79993247 MS.gene56157:intron 60.0%
TCCTGGTAAGCGTGCGAGTG+AGG + chr7.4:79993232-79993251 None:intergenic 60.0%
GGGATGTTCGGGGACGAACC+AGG + chr7.4:79993553-79993572 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 79991912 79994737 79991912 ID=MS.gene56157
chr7.4 mRNA 79991912 79994737 79991912 ID=MS.gene56157.t1;Parent=MS.gene56157
chr7.4 exon 79993531 79994737 79993531 ID=MS.gene56157.t1.exon1;Parent=MS.gene56157.t1
chr7.4 CDS 79993531 79994737 79993531 ID=cds.MS.gene56157.t1;Parent=MS.gene56157.t1
chr7.4 exon 79992203 79992834 79992203 ID=MS.gene56157.t1.exon2;Parent=MS.gene56157.t1
chr7.4 CDS 79992203 79992834 79992203 ID=cds.MS.gene56157.t1;Parent=MS.gene56157.t1
chr7.4 exon 79992016 79992117 79992016 ID=MS.gene56157.t1.exon3;Parent=MS.gene56157.t1
chr7.4 CDS 79992016 79992117 79992016 ID=cds.MS.gene56157.t1;Parent=MS.gene56157.t1
chr7.4 exon 79991912 79991932 79991912 ID=MS.gene56157.t1.exon4;Parent=MS.gene56157.t1
chr7.4 CDS 79991912 79991932 79991912 ID=cds.MS.gene56157.t1;Parent=MS.gene56157.t1
Gene Sequence

>MS.gene56157

ATGACAACCACTATACCTAGTGTTGGCATGGAGTTTGATAGTGTAGATGAAGCTTGGCAGTTTTGGGTTGAGTATGGTAAAGAAACTGGCTTTGGTGTTAGAAAGGATTATTTCAACAAAAGAAAGAAAGACAACTCCATTAGATCATGCAGGTTTGTTTGTTGCAAGGAGGGTCATCGGATGCCGGACAAGAGATCTTATTTAGTTAAGAATCCTAGAGCTGAAACAAGGACTGATTGCAAAGCAAGAATTGCACTTAGTTCAAAGAATGGAAAGTTTGTAATCCATGAGTTTGTGAAGGACCATAACCACGATTTACAGCTTCCACAGACAACACACAAGCTAGCATCACACCGTAAAATATCTGAAGTTCAAGCATATGAGATTGAAATGGCAGAGGACTCTGGTTTGAGGCAAAAGGCTTTATTTCAACTTATGAGTGCACAAGCAGGTGGTAGAACTAATCTTGGATATACACGGTTGGATGCTAAGAACTATCTTAAAGCAAGAAGACAACGTAACATGGTTTATGGGGAAGTTGGTAGTCTTATGAAGTATTTTCAACATCAGTTATTGAAGAATCCTTCATTTTTTCATGCACATCAGATGGATTGCGATGAACAAATCACAAATGTATTTTGGGATGATGCAAAAATGATCTTAGATTATGGATATTTTGGTGAGGTGGTTTCTTTAGATACTACGTATTGTACCAATCATGCTAATAGACCGTTGGCATTGTTTTCAGGCTTTAACCATTATAGAGGCGTTGTCATTTTTGGGGCTGCACTCTTATATGATGAAACTGCTGAATCTTTCAAATGGTTATTTGAGGTATTTCTTGAAGCACATGGAAATAAAAAACCCCAAACTTTGTTCACAGATCAAGACCAGGCAATGTCTAAAGCACTAGCTGAAGTGATGCCAGAGACTCGACATGGGTTATGTACATGGCACTTGATTCAGAATGGTATAAAACACCTTGGTAACTTGATGAAAAAAGGAAGTCATTTCTTGGCTGATTTTAAGAAGTGCATGTATGATTATGATCAAGAGGAGAAGTTTGAGACAGCTTGGAGCAAGTTGGTTTCAGAATTTAATGTCAATGAAAACAATTGGGTGAAGTCGATGTATGCTATTAAGGAAAAATGGGCAGCATGTCACATGAAGGAAGCATTCACTCTAGGAATGCGAAGCACTCAACTTAGTGAGAGTTTGAATTCTGATTTTAAGGCATGTATTGTAACATCCCAGACTGCTTTTAGGATTGCCTGACTAACCCCACAAACCAACACTAGTCTTTTCAGCGTGTTTTGTCCTCACTCGCACGCTTACCAGGAAACTTCCCGGTAGGTCACCCATCCTAGTACTACTCCAAGCCAAGCACGCTTAACTGTGGAGTTCCTATGGATTGAGCTCCCGAAAAGAAGATGCATCTTCTTTTCGGTAGCTCAATCCATAGGAACTCCATAGTTAAGCGTGCTTGGCTTGGAGTAGTACTAGGATGGGTGACCTACCGGGAAGTTTCCCGGTAAGCATGTGAGTGAGGACAAAGCATGCTGAAAAGACTCGTGTTGGTTTGTGGGGTTAGTCGGCAATCCTAAAAAGCAGTTTGGGATGTTACACTTGGTATCAGAGCCTGGTTCGTCCCCGAACATCCCATTTCCATTCTGGAAATGGGATGTTACATGTATGACACCAAACATCAATGTTACTGATTTTTTCAAACACTTTGAGAGAGTTGTGGAGGAAAAGCGAAACAACGAGTTAGTTTGTGAATATGAGGCTCGACATAAACTGCCAAATTTGATATACAGCCATTCACCAATTTTAGTGCAACTCGCGCAAATATACACACCTGCCATTTTTGACAAATTCCATAATGAATTTTCCTTATTTTTAGCTGCTCGCATAGAGAAAAAATATATGTCCCAACTTCCATTTGAATATGTCATCACCTTGGTCAATAAGGAAGGAGAGTTTAAGGAAGGAGAGTGGAGAGTTCTATTTGATCCTGCACAGTCATCTATATCATGTAGTTGTAGAAAGTTTGAGACTTTTGGAATACTTTGTTGCCATGCACTCAAGATCTTTGAGGCAAATGATGTTAAACTTGTCCCTGAACAATACATCTTAAAGAGGTGGACAAGAGATGCACGCAATGGTATTATATATGATGCAAAGGAAAATGAGGTTGTGGAAGATCCCAAATTATCTATAACACAACGATATAGGCGACTTTGCTCAACAATGATTAGATTGGCAGCCGATGTATCCACATCTCCTACATTATATGAACTTGCAGACAATGTAATACATGACTTGTGTAAAAAAGTGATGGAGGTTAGACTAGAACAAAATGCAACGGTCAATGATGAAGTTGGTGTTCCGACATTGGCTGAACCGATTGAGACAACAACAAAGGGGTATAAGAATCGGCGTGGGTCAAAGAGACAAAAGCGATTCAAAAGTTGGATTGAACGTCAGCCTAAAAGAGCTCCGATTGTACAACCTTCGTCTTGTCATCAATCAAGGGTATATAAGTTTATTGTTGTAACAATTTTTCTTTCAAAATAATTATTTTTCAATTATTGTGTATTAATTTTTAAAATCATTGAAGGTTGGATCTTCAAGTCAGATCGTCTTTCAGACATCAGGTGTGGCACATCCAGCACATGAGTTATCTCAAACAAATCAATTTAGTTTCACTAGATTATTAATGGTAAGATTCCTTGGTCTATAAAAAGTAATGGTTATGTTTTATTTCCAACTTTTTATGATACTGTGTATATGTTTTTAATGTAGGAGTCAATTGAACATGAATGA
Protein sequence

>MS.gene56157.t1

MTTTIPSVGMEFDSVDEAWQFWVEYGKETGFGVRKDYFNKRKKDNSIRSCRFVCCKEGHRMPDKRSYLVKNPRAETRTDCKARIALSSKNGKFVIHEFVKDHNHDLQLPQTTHKLASHRKISEVQAYEIEMAEDSGLRQKALFQLMSAQAGGRTNLGYTRLDAKNYLKARRQRNMVYGEVGSLMKYFQHQLLKNPSFFHAHQMDCDEQITNVFWDDAKMILDYGYFGEVVSLDTTYCTNHANRPLALFSGFNHYRGVVIFGAALLYDETAESFKWLFEVFLEAHGNKKPQTLFTDQDQAMSKALAEVMPETRHGLCTWHLIQNGIKHLGNLMKKGSHFLADFKKCMYDYDQEEKFETAWSKLVSEFNVNENNWVKSMYAIKEKWAACHMKEAFTLGMRSTQLTARIEKKYMSQLPFEYVITLVNKEGEFKEGEWRVLFDPAQSSISCSCRKFETFGILCCHALKIFEANDVKLVPEQYILKRWTRDARNGIIYDAKENEVVEDPKLSITQRYRRLCSTMIRLAADVSTSPTLYELADNVIHDLCKKVMEVRLEQNATVNDEVGVPTLAEPIETTTKGYKNRRGSKRQKRFKSWIERQPKRAPIVQPSSCHQSRVGSSSQIVFQTSGVAHPAHELSQTNQFSFTRLLMESIEHE