AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene56264

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56264.t1 MTR_3g009470 97.727 704 13 2 1 701 1 704 0.0 1416
MS.gene56264.t1 MTR_3g009470 97.476 515 12 1 1 514 1 515 0.0 1030
MS.gene56264.t1 MTR_3g009470 58.333 60 24 1 494 553 280 338 2.79e-14 76.6
MS.gene56264.t1 MTR_7g080020 45.574 531 227 14 81 563 46 562 1.48e-117 370
MS.gene56264.t1 MTR_7g080020 51.389 72 34 1 280 350 493 564 6.65e-14 75.9
MS.gene56264.t1 MTR_7g080000 44.556 496 206 16 81 556 48 494 1.10e-106 340
MS.gene56264.t1 MTR_3g056100 44.033 486 197 14 109 572 60 492 3.66e-103 327
MS.gene56264.t1 MTR_3g056100 43.265 490 182 15 109 572 60 479 8.11e-102 323
MS.gene56264.t1 MTR_5g094430 42.217 469 175 13 109 560 41 430 2.91e-95 305
MS.gene56264.t1 MTR_5g094430 48.148 81 39 2 494 574 200 277 1.23e-13 74.7
MS.gene56264.t1 MTR_5g074400 41.921 458 197 11 112 558 85 484 5.21e-89 290
MS.gene56264.t1 MTR_3g056100 48.256 344 123 9 232 572 57 348 2.41e-86 279
MS.gene56264.t1 MTR_5g094430 54.064 283 78 6 279 560 65 296 1.62e-85 275
MS.gene56264.t1 MTR_5g094430 48.148 81 39 2 494 574 66 143 1.17e-13 73.9
MS.gene56264.t1 MTR_5g094430 54.064 283 78 6 279 560 87 318 1.78e-85 276
MS.gene56264.t1 MTR_5g094430 48.148 81 39 2 494 574 88 165 1.13e-13 74.3
MS.gene56264.t1 MTR_7g011820 51.667 300 104 9 278 573 226 488 2.65e-85 278
MS.gene56264.t1 MTR_3g056100 48.266 346 107 10 232 572 57 335 3.11e-85 275
MS.gene56264.t1 MTR_5g042920 48.553 311 107 7 262 570 136 395 1.23e-81 266
MS.gene56264.t1 MTR_5g042920 47.525 101 42 5 494 586 151 248 1.40e-16 83.2
MS.gene56264.t1 MTR_7g071120 51.042 288 81 4 279 564 165 394 9.41e-80 263
MS.gene56264.t1 MTR_7g071120 48.276 87 38 3 494 576 166 249 8.71e-16 81.3
MS.gene56264.t1 MTR_7g100510 38.832 394 174 10 176 553 78 420 5.38e-69 233
MS.gene56264.t1 MTR_4g013260 67.717 127 34 3 435 556 274 398 3.99e-47 174
MS.gene56264.t1 MTR_3g031220 71.963 107 27 1 455 558 323 429 3.65e-45 169
MS.gene56264.t1 MTR_3g031220 39.574 235 108 6 110 343 60 261 5.25e-36 142
MS.gene56264.t1 MTR_3g031220 54.545 77 26 3 485 555 185 258 4.85e-15 79.0
MS.gene56264.t1 MTR_3g031220 55.556 72 30 2 280 350 365 435 3.28e-14 76.3
MS.gene56264.t1 MTR_4g130900 35.540 287 140 7 272 556 178 421 4.34e-43 163
MS.gene56264.t1 MTR_4g130900 50.667 75 32 2 272 345 355 425 5.80e-16 81.6
MS.gene56264.t1 MTR_4g082580 55.944 143 53 2 429 570 221 354 1.97e-41 155
MS.gene56264.t1 MTR_4g082580 60.976 82 29 2 262 342 129 208 8.86e-24 104
MS.gene56264.t1 MTR_4g082580 60.000 60 23 1 280 338 278 337 3.39e-14 75.5
MS.gene56264.t1 MTR_4g082580 53.425 73 32 1 494 566 145 215 5.21e-14 74.7
MS.gene56264.t1 MTR_3g031220 39.574 235 108 6 110 343 60 261 7.88e-37 142
MS.gene56264.t1 MTR_3g031220 65.079 63 19 1 455 514 323 385 2.81e-19 90.9
MS.gene56264.t1 MTR_3g031220 54.545 77 26 3 485 555 185 258 1.94e-15 79.3
MS.gene56264.t1 MTR_1g077780 50.420 119 57 1 444 560 10 128 3.90e-34 127
MS.gene56264.t1 MTR_1g077780 51.667 60 28 1 280 338 62 121 1.07e-11 63.5
MS.gene56264.t1 MTR_8g007270 65.789 76 26 0 475 550 135 210 5.23e-30 119
MS.gene56264.t1 MTR_8g007270 61.404 57 21 1 280 335 154 210 1.48e-16 79.7
MS.gene56264.t1 MTR_5g097490 57.000 100 42 1 458 556 215 314 3.26e-29 120
MS.gene56264.t1 MTR_5g097490 61.667 60 23 0 279 338 91 150 8.02e-20 92.8
MS.gene56264.t1 MTR_5g097490 43.636 110 47 5 246 349 220 320 3.37e-14 75.5
MS.gene56264.t1 MTR_5g097490 50.000 64 31 1 492 555 90 152 2.14e-11 66.6
MS.gene56264.t1 MTR_7g109800 60.465 86 34 0 478 563 129 214 3.73e-28 115
MS.gene56264.t1 MTR_7g109800 57.353 68 28 1 280 346 145 212 2.27e-17 83.6
MS.gene56264.t1 MTR_3g095080 62.162 74 28 0 477 550 151 224 1.50e-27 112
MS.gene56264.t1 MTR_3g095080 56.140 57 24 1 280 335 168 224 1.46e-14 74.3
MS.gene56264.t1 MTR_2g033820 65.385 78 27 0 478 555 187 264 1.50e-27 115
MS.gene56264.t1 MTR_2g033820 57.812 64 26 1 280 342 203 266 6.01e-17 84.0
MS.gene56264.t1 MTR_3g095080 62.162 74 28 0 477 550 127 200 1.67e-27 111
MS.gene56264.t1 MTR_3g095080 56.140 57 24 1 280 335 144 200 1.86e-14 73.6
MS.gene56264.t1 MTR_4g094588 64.474 76 27 0 480 555 164 239 2.06e-27 114
MS.gene56264.t1 MTR_4g094588 64.062 64 22 1 280 342 178 241 1.10e-18 88.6
MS.gene56264.t1 MTR_5g043880 64.474 76 27 0 475 550 105 180 4.05e-27 112
MS.gene56264.t1 MTR_5g043880 64.912 57 19 1 280 335 124 180 6.07e-17 82.0
MS.gene56264.t1 MTR_3g104750 58.228 79 33 0 472 550 82 160 8.83e-27 107
MS.gene56264.t1 MTR_3g104750 44.444 81 41 2 260 336 81 161 4.22e-12 65.5
MS.gene56264.t1 MTR_1g086790 54.082 98 44 1 478 575 142 238 2.04e-26 111
MS.gene56264.t1 MTR_1g086790 54.054 74 33 1 280 352 158 231 1.68e-18 87.8
MS.gene56264.t1 MTR_8g092140 61.333 75 28 1 477 550 142 216 4.74e-26 107
MS.gene56264.t1 MTR_8g092140 56.140 57 24 1 280 335 160 216 1.15e-14 74.3
MS.gene56264.t1 MTR_5g091390 60.526 76 30 0 480 555 143 218 8.71e-26 108
MS.gene56264.t1 MTR_5g091390 59.375 64 25 1 280 342 157 220 8.19e-17 82.4
MS.gene56264.t1 MTR_7g079010 49.533 107 48 1 444 550 97 197 9.32e-26 106
MS.gene56264.t1 MTR_7g079010 45.918 98 39 3 252 336 102 198 2.89e-18 84.7
MS.gene56264.t1 MTR_8g092010 50.000 88 44 0 481 568 95 182 2.84e-25 103
MS.gene56264.t1 MTR_8g092010 46.667 75 39 1 280 353 108 182 3.16e-12 66.2
MS.gene56264.t1 MTR_1g015140 56.627 83 34 1 470 550 76 158 3.28e-25 102
MS.gene56264.t1 MTR_1g015140 51.724 58 27 1 280 336 102 159 1.17e-13 69.7
MS.gene56264.t1 MTR_4g132430 48.039 102 52 1 455 555 88 189 4.47e-25 107
MS.gene56264.t1 MTR_4g132430 41.935 93 52 2 249 339 96 188 5.36e-15 77.4
MS.gene56264.t1 MTR_8g096730 49.495 99 48 1 460 558 38 134 5.16e-25 102
MS.gene56264.t1 MTR_8g096730 51.724 58 27 1 280 336 70 127 2.83e-15 73.9
MS.gene56264.t1 MTR_7g028415 64.706 68 24 0 485 552 84 151 8.89e-25 102
MS.gene56264.t1 MTR_7g028415 53.448 58 26 1 280 336 93 150 1.84e-15 75.1
MS.gene56264.t1 MTR_7g028710 64.706 68 24 0 485 552 84 151 8.89e-25 102
MS.gene56264.t1 MTR_7g028710 53.448 58 26 1 280 336 93 150 1.84e-15 75.1
MS.gene56264.t1 MTR_4g132430 48.039 102 52 1 455 555 222 323 4.26e-24 107
MS.gene56264.t1 MTR_4g132430 41.935 93 52 2 249 339 230 322 1.67e-14 77.0
MS.gene56264.t1 MTR_7g110720 50.000 92 44 2 477 566 172 263 2.64e-23 103
MS.gene56264.t1 MTR_7g110720 54.098 61 26 2 281 339 190 250 6.92e-14 74.7
MS.gene56264.t1 MTR_3g095040 48.387 93 48 0 480 572 104 196 2.98e-23 98.6
MS.gene56264.t1 MTR_3g095040 55.000 60 26 1 280 338 118 177 3.47e-14 72.4
MS.gene56264.t1 MTR_2g023930 40.645 155 76 5 411 553 215 365 3.06e-23 104
MS.gene56264.t1 MTR_2g023930 44.086 93 50 2 249 339 274 366 1.90e-16 83.6
MS.gene56264.t1 MTR_7g110720 50.000 92 44 2 477 566 199 290 3.61e-23 103
MS.gene56264.t1 MTR_7g110720 54.098 61 26 2 281 339 217 277 7.11e-14 74.7
MS.gene56264.t1 MTR_2g088000 53.571 84 38 1 473 555 328 411 1.30e-22 103
MS.gene56264.t1 MTR_2g088000 42.683 82 44 3 281 360 350 430 3.96e-12 69.7
MS.gene56264.t1 MTR_4g122530 52.381 84 40 0 478 561 192 275 1.65e-22 101
MS.gene56264.t1 MTR_4g122530 52.174 69 32 1 280 347 208 276 1.72e-15 79.7
MS.gene56264.t1 MTR_1g078260 41.096 146 76 5 432 569 180 323 3.04e-22 101
MS.gene56264.t1 MTR_3g053330 52.564 78 36 1 477 553 234 311 3.16e-22 100
MS.gene56264.t1 MTR_3g053330 42.683 82 44 3 281 360 252 332 1.29e-13 74.3
MS.gene56264.t1 MTR_4g094412 55.128 78 34 1 478 554 218 295 4.06e-22 100
MS.gene56264.t1 MTR_4g094412 51.667 60 27 2 281 338 235 294 4.75e-12 69.3
MS.gene56264.t1 MTR_4g094412 55.128 78 34 1 478 554 227 304 4.22e-22 100
MS.gene56264.t1 MTR_4g094412 51.667 60 27 2 281 338 244 303 5.37e-12 69.3
MS.gene56264.t1 MTR_4g107970 51.948 77 36 1 478 553 162 238 2.05e-21 99.0
MS.gene56264.t1 MTR_4g107970 40.000 100 55 4 244 338 139 238 1.06e-12 71.6
MS.gene56264.t1 MTR_2g045360 36.424 151 86 4 432 580 157 299 2.06e-21 98.2
MS.gene56264.t1 MTR_2g045360 39.362 94 54 3 251 342 183 275 8.72e-13 71.2
MS.gene56264.t1 MTR_4g107970 51.948 77 36 1 478 553 239 315 3.24e-21 99.0
MS.gene56264.t1 MTR_4g107970 40.000 100 55 4 244 338 216 315 2.14e-12 70.9
MS.gene56264.t1 MTR_4g049790 48.315 89 45 1 468 555 286 374 3.73e-21 98.2
MS.gene56264.t1 MTR_4g049790 43.750 64 34 2 281 342 313 376 6.73e-11 65.9
MS.gene56264.t1 MTR_5g074200 60.938 64 25 0 280 343 220 283 2.05e-20 93.6
MS.gene56264.t1 MTR_5g074200 53.226 62 28 1 494 555 220 280 2.35e-13 72.4
MS.gene56264.t1 MTR_4g094908 48.864 88 41 2 475 561 250 334 2.38e-20 93.6
MS.gene56264.t1 MTR_4g094908 50.877 57 26 2 281 335 267 323 1.21e-11 67.0
MS.gene56264.t1 MTR_6g086555 46.602 103 54 1 452 553 164 266 2.92e-20 94.4
MS.gene56264.t1 MTR_6g086555 46.154 65 33 2 281 343 207 271 2.95e-11 66.6
MS.gene56264.t1 MTR_1g009613 52.439 82 38 1 475 555 243 324 6.59e-20 92.0
MS.gene56264.t1 MTR_1g009613 39.326 89 51 3 249 335 232 319 2.95e-12 68.9
MS.gene56264.t1 MTR_7g009730 45.263 95 47 2 465 558 194 284 7.72e-20 94.4
MS.gene56264.t1 MTR_7g009730 47.826 69 33 3 271 336 209 277 2.70e-11 67.0
MS.gene56264.t1 MTR_5g097500 45.161 93 48 1 471 560 204 296 1.04e-19 90.9
MS.gene56264.t1 MTR_5g097500 50.847 59 29 0 280 338 83 141 5.84e-14 73.9
MS.gene56264.t1 MTR_4g049760 52.632 76 35 1 481 555 277 352 2.27e-19 92.8
MS.gene56264.t1 MTR_7g062220 63.158 57 21 0 494 550 124 180 4.52e-19 89.4
MS.gene56264.t1 MTR_7g062220 51.429 70 33 1 271 339 115 184 7.63e-14 73.6
MS.gene56264.t1 MTR_5g016610 47.368 95 39 2 459 552 174 258 7.65e-19 87.4
MS.gene56264.t1 MTR_5g016610 36.782 87 52 3 251 335 171 256 5.06e-11 64.3
MS.gene56264.t1 MTR_2g105060 42.553 94 38 2 477 554 62 155 1.34e-18 86.3
MS.gene56264.t1 MTR_2g105060 49.180 61 29 2 280 338 94 154 5.07e-12 67.0
MS.gene56264.t1 MTR_2g105060 42.553 94 38 2 477 554 137 230 3.08e-18 86.7
MS.gene56264.t1 MTR_2g105060 49.180 61 29 2 280 338 169 229 6.53e-12 67.8
MS.gene56264.t1 MTR_4g127040 48.387 93 37 3 459 550 220 302 3.98e-18 86.3
MS.gene56264.t1 MTR_4g127040 36.782 87 52 3 251 335 217 302 2.72e-12 68.9
MS.gene56264.t1 MTR_3g106060 52.055 73 32 2 481 550 123 195 4.49e-18 85.9
MS.gene56264.t1 MTR_3g106060 50.000 62 29 2 276 335 134 195 3.47e-12 68.2
MS.gene56264.t1 MTR_2g016770 53.030 66 29 2 277 340 32 97 1.12e-16 80.1
MS.gene56264.t1 MTR_2g016770 46.667 75 38 2 495 567 36 110 7.08e-14 71.6
MS.gene56264.t1 MTR_4g007060 53.968 63 28 1 492 553 126 188 1.27e-16 81.3
MS.gene56264.t1 MTR_4g007060 50.000 66 31 2 276 339 124 189 3.02e-14 74.3
MS.gene56264.t1 MTR_1g013790 46.575 73 38 1 482 553 89 161 1.34e-16 80.5
MS.gene56264.t1 MTR_2g016770 53.030 66 29 2 277 340 24 89 1.51e-16 79.3
MS.gene56264.t1 MTR_2g016770 46.667 75 38 2 495 567 28 102 7.94e-14 71.6
MS.gene56264.t1 MTR_4g007060 53.968 63 28 1 492 553 160 222 1.95e-16 81.3
MS.gene56264.t1 MTR_4g007060 50.000 66 31 2 276 339 158 223 4.52e-14 74.3
MS.gene56264.t1 MTR_1g070455 49.351 77 38 1 475 550 274 350 2.15e-16 82.0
MS.gene56264.t1 MTR_1g070455 52.459 61 27 2 281 339 294 354 5.08e-12 68.6
MS.gene56264.t1 MTR_4g047580 41.379 87 50 1 470 555 257 343 6.58e-16 81.6
MS.gene56264.t1 MTR_7g109600 53.030 66 30 1 495 559 54 119 7.00e-16 78.6
MS.gene56264.t1 MTR_7g109600 53.846 65 27 3 276 338 50 113 1.53e-13 71.6
MS.gene56264.t1 MTR_8g067635 40.708 113 59 4 245 349 308 420 1.07e-15 80.9
MS.gene56264.t1 MTR_8g067635 43.023 86 46 2 492 576 347 430 4.65e-13 72.8
MS.gene56264.t1 MTR_8g087000 42.466 73 41 1 495 566 78 150 1.72e-15 77.0
MS.gene56264.t1 MTR_8g087000 37.391 115 57 4 269 375 66 173 3.30e-15 76.3
MS.gene56264.t1 MTR_8g087000 42.466 73 41 1 495 566 77 149 1.86e-15 77.0
MS.gene56264.t1 MTR_8g087000 37.391 115 57 4 269 375 65 172 3.49e-15 76.3
MS.gene56264.t1 MTR_1g013760 44.578 83 40 3 474 550 115 197 1.89e-15 77.8
MS.gene56264.t1 MTR_1g013760 38.318 107 60 4 281 383 141 245 7.75e-12 67.0
MS.gene56264.t1 MTR_6g046600 52.113 71 34 0 296 366 18 88 2.18e-15 73.2
MS.gene56264.t1 MTR_8g067650 52.055 73 33 2 279 349 338 410 2.54e-15 79.7
MS.gene56264.t1 MTR_8g067650 39.796 98 55 3 481 576 325 420 6.08e-13 72.4
MS.gene56264.t1 MTR_2g024350 48.611 72 35 2 280 349 8 79 2.65e-15 76.3
MS.gene56264.t1 MTR_2g024350 48.529 68 34 1 489 555 3 70 1.71e-14 73.9
MS.gene56264.t1 MTR_1g099600 42.353 85 47 2 475 558 167 250 3.83e-15 77.4
MS.gene56264.t1 MTR_1g099600 50.685 73 33 3 279 349 184 255 2.27e-13 72.0
MS.gene56264.t1 MTR_8g098945 48.780 82 36 5 271 349 121 199 4.15e-15 76.6
MS.gene56264.t1 MTR_8g098945 49.254 67 33 1 493 558 128 194 1.01e-14 75.5
MS.gene56264.t1 MTR_3g108960 40.196 102 55 2 451 551 276 372 4.51e-15 78.2
MS.gene56264.t1 MTR_3g108960 45.902 61 31 2 281 339 315 375 8.77e-11 65.1
MS.gene56264.t1 MTR_8g099350 51.351 74 28 3 264 333 120 189 9.40e-15 77.0
MS.gene56264.t1 MTR_5g067680 51.515 66 26 3 274 333 194 259 1.15e-14 76.6
MS.gene56264.t1 MTR_2g024380 48.611 72 35 2 280 349 251 322 1.86e-14 77.0
MS.gene56264.t1 MTR_2g024380 46.575 73 38 1 483 554 240 312 1.59e-13 73.9
MS.gene56264.t1 MTR_1g077760 60.000 45 18 0 470 514 90 134 2.23e-14 70.9
MS.gene56264.t1 MTR_2g083870 48.438 64 32 1 495 557 81 144 2.95e-14 73.9
MS.gene56264.t1 MTR_2g083870 49.231 65 31 2 278 340 78 142 9.03e-12 66.6
MS.gene56264.t1 MTR_5g044695 45.588 68 37 0 455 522 38 105 4.49e-14 69.3
MS.gene56264.t1 MTR_8g028565 50.769 65 31 1 495 558 156 220 5.25e-14 74.3
MS.gene56264.t1 MTR_8g028565 49.315 73 34 3 279 349 154 225 3.88e-11 65.5
MS.gene56264.t1 MTR_2g032030 46.575 73 37 2 487 558 261 332 6.80e-14 75.1
MS.gene56264.t1 MTR_2g032030 42.857 91 46 4 281 366 268 357 3.58e-12 69.7
MS.gene56264.t1 MTR_2g032030 47.692 65 33 1 495 558 268 332 7.25e-14 74.7
MS.gene56264.t1 MTR_2g032030 42.857 91 46 4 281 366 268 357 3.42e-12 69.3
MS.gene56264.t1 MTR_7g079040 49.231 65 32 1 495 558 155 219 1.06e-13 73.2
MS.gene56264.t1 MTR_7g079040 50.000 62 29 2 279 338 153 214 2.67e-11 65.9
MS.gene56264.t1 MTR_0117s0040 46.479 71 37 1 481 550 61 131 2.35e-13 70.9
MS.gene56264.t1 MTR_8g069935 53.968 63 27 2 278 338 329 391 2.88e-13 73.2
MS.gene56264.t1 MTR_8g069935 41.791 67 38 1 494 559 331 397 5.86e-12 68.9
MS.gene56264.t1 MTR_3g090860 53.333 60 24 2 278 333 131 190 4.17e-13 71.6
MS.gene56264.t1 MTR_3g090860 34.513 113 62 3 493 597 132 240 6.25e-12 68.2
MS.gene56264.t1 MTR_6g038890 45.588 68 37 0 455 522 149 216 1.73e-12 67.8
MS.gene56264.t1 MTR_8g027860 51.724 58 24 2 280 333 136 193 3.76e-12 68.9
MS.gene56264.t1 MTR_4g021780 40.260 77 45 1 262 338 5 80 4.60e-12 63.9
MS.gene56264.t1 MTR_3g095080 62.500 40 15 0 477 516 151 190 6.42e-12 65.5
MS.gene56264.t1 MTR_7g117200 44.286 70 33 3 280 343 118 187 1.13e-11 67.0
MS.gene56264.t1 MTR_6g053200 50.000 62 29 2 279 338 329 390 2.17e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56264.t1 AT5G56270 50.475 737 272 29 1 696 1 685 0.0 533
MS.gene56264.t1 AT4G26440 42.959 703 255 22 1 695 1 565 1.64e-146 439
MS.gene56264.t1 AT4G26640 43.833 454 187 11 113 559 14 406 8.25e-96 306
MS.gene56264.t1 AT4G26640 43.833 454 187 11 113 559 54 446 2.60e-95 306
MS.gene56264.t1 AT4G26640 42.824 432 179 11 135 559 4 374 1.45e-83 273
MS.gene56264.t1 AT4G26640 52.595 289 88 6 275 559 27 270 3.13e-83 268
MS.gene56264.t1 AT4G26640 52.595 289 88 6 275 559 27 270 3.13e-83 268
MS.gene56264.t1 AT4G26640 52.595 289 88 6 275 559 27 270 3.13e-83 268
MS.gene56264.t1 AT4G26640 52.595 289 88 6 275 559 27 270 3.13e-83 268
MS.gene56264.t1 AT2G03340 46.713 289 93 5 278 560 248 481 9.35e-76 253
MS.gene56264.t1 AT2G03340 51.316 76 36 1 494 569 250 324 1.72e-16 83.6
MS.gene56264.t1 AT1G13960 47.670 279 106 6 278 553 74 315 6.05e-72 238
MS.gene56264.t1 AT1G13960 47.670 279 106 6 278 553 227 468 1.21e-71 242
MS.gene56264.t1 AT2G37260 47.552 286 102 10 274 550 79 325 2.91e-60 206
MS.gene56264.t1 AT2G37260 52.055 73 30 2 495 563 86 157 2.21e-14 75.5
MS.gene56264.t1 AT2G37260 47.552 286 102 10 274 550 77 323 4.11e-60 206
MS.gene56264.t1 AT2G37260 52.055 73 30 2 495 563 84 155 2.49e-14 75.5
MS.gene56264.t1 AT2G37260 47.552 286 102 10 274 550 159 405 6.86e-60 208
MS.gene56264.t1 AT2G37260 52.055 73 30 2 495 563 166 237 3.03e-14 75.9
MS.gene56264.t1 AT5G07100 68.519 108 25 1 449 556 105 203 1.48e-42 154
MS.gene56264.t1 AT5G07100 64.000 75 26 1 279 352 23 97 1.56e-24 102
MS.gene56264.t1 AT5G07100 45.882 85 44 1 494 576 24 108 3.30e-15 75.9
MS.gene56264.t1 AT5G07100 54.688 64 28 1 280 342 141 204 4.00e-14 72.4
MS.gene56264.t1 AT5G07100 68.519 108 25 1 449 556 105 203 1.48e-42 154
MS.gene56264.t1 AT5G07100 64.000 75 26 1 279 352 23 97 1.56e-24 102
MS.gene56264.t1 AT5G07100 45.882 85 44 1 494 576 24 108 3.30e-15 75.9
MS.gene56264.t1 AT5G07100 54.688 64 28 1 280 342 141 204 4.00e-14 72.4
MS.gene56264.t1 AT5G07100 68.519 108 25 1 449 556 105 203 1.48e-42 154
MS.gene56264.t1 AT5G07100 64.000 75 26 1 279 352 23 97 1.56e-24 102
MS.gene56264.t1 AT5G07100 45.882 85 44 1 494 576 24 108 3.30e-15 75.9
MS.gene56264.t1 AT5G07100 54.688 64 28 1 280 342 141 204 4.00e-14 72.4
MS.gene56264.t1 AT5G07100 68.519 108 25 1 449 556 105 203 1.48e-42 154
MS.gene56264.t1 AT5G07100 64.000 75 26 1 279 352 23 97 1.56e-24 102
MS.gene56264.t1 AT5G07100 45.882 85 44 1 494 576 24 108 3.30e-15 75.9
MS.gene56264.t1 AT5G07100 54.688 64 28 1 280 342 141 204 4.00e-14 72.4
MS.gene56264.t1 AT5G07100 68.519 108 25 1 449 556 198 296 3.40e-42 155
MS.gene56264.t1 AT5G07100 64.000 75 26 1 279 352 116 190 4.14e-24 103
MS.gene56264.t1 AT5G07100 34.899 149 78 3 441 576 59 201 3.83e-16 80.5
MS.gene56264.t1 AT5G07100 54.688 64 28 1 280 342 234 297 4.88e-14 73.9
MS.gene56264.t1 AT4G12020 41.102 236 94 8 281 514 469 661 4.70e-40 159
MS.gene56264.t1 AT4G12020 41.304 92 43 2 493 574 467 557 3.61e-12 70.9
MS.gene56264.t1 AT4G12020 41.102 236 94 8 281 514 469 661 4.70e-40 159
MS.gene56264.t1 AT4G12020 41.304 92 43 2 493 574 467 557 3.61e-12 70.9
MS.gene56264.t1 AT4G12020 41.102 236 94 8 281 514 469 661 5.27e-40 159
MS.gene56264.t1 AT4G12020 41.304 92 43 2 493 574 467 557 3.33e-12 70.9
MS.gene56264.t1 AT4G12020 41.102 236 94 8 281 514 469 661 5.28e-40 159
MS.gene56264.t1 AT4G12020 41.304 92 43 2 493 574 467 557 3.53e-12 70.9
MS.gene56264.t1 AT4G12020 41.102 236 94 8 281 514 469 661 5.65e-40 159
MS.gene56264.t1 AT4G12020 41.304 92 43 2 493 574 467 557 3.72e-12 70.9
MS.gene56264.t1 AT4G12020 41.102 236 94 8 281 514 469 661 5.76e-40 159
MS.gene56264.t1 AT4G12020 41.304 92 43 2 493 574 467 557 3.72e-12 70.9
MS.gene56264.t1 AT4G12020 41.102 236 94 8 281 514 469 661 5.76e-40 159
MS.gene56264.t1 AT4G12020 41.304 92 43 2 493 574 467 557 3.72e-12 70.9
MS.gene56264.t1 AT4G12020 41.102 236 94 8 281 514 469 661 5.78e-40 159
MS.gene56264.t1 AT4G12020 41.304 92 43 2 493 574 467 557 3.51e-12 70.9
MS.gene56264.t1 AT4G12020 41.102 236 94 8 281 514 469 661 6.74e-40 159
MS.gene56264.t1 AT4G12020 41.304 92 43 2 493 574 467 557 3.82e-12 70.5
MS.gene56264.t1 AT4G12020 41.102 236 94 8 281 514 402 594 7.06e-40 159
MS.gene56264.t1 AT4G12020 41.304 92 43 2 493 574 400 490 3.73e-12 70.9
MS.gene56264.t1 AT4G12020 41.102 236 94 8 281 514 469 661 7.73e-40 158
MS.gene56264.t1 AT4G12020 41.304 92 43 2 493 574 467 557 5.48e-12 70.1
MS.gene56264.t1 AT3G01080 71.579 95 24 1 459 553 274 365 8.04e-39 149
MS.gene56264.t1 AT3G01080 72.857 70 18 1 278 347 165 233 3.44e-27 115
MS.gene56264.t1 AT3G01080 55.556 63 27 1 494 556 167 228 2.19e-14 76.3
MS.gene56264.t1 AT3G01080 58.333 60 24 1 280 338 306 365 3.54e-14 75.9
MS.gene56264.t1 AT3G01080 71.579 95 24 1 459 553 312 403 8.83e-39 150
MS.gene56264.t1 AT3G01080 72.857 70 18 1 278 347 203 271 3.55e-27 115
MS.gene56264.t1 AT3G01080 55.556 63 27 1 494 556 205 266 1.79e-14 77.0
MS.gene56264.t1 AT3G01080 58.333 60 24 1 280 338 344 403 2.60e-14 76.3
MS.gene56264.t1 AT2G30250 66.265 83 28 0 473 555 307 389 2.10e-34 135
MS.gene56264.t1 AT2G30250 67.692 65 21 0 279 343 165 229 5.40e-22 99.4
MS.gene56264.t1 AT2G30250 56.923 65 27 1 281 344 329 393 5.59e-14 74.7
MS.gene56264.t1 AT2G30250 47.561 82 37 2 472 553 149 224 1.63e-12 70.5
MS.gene56264.t1 AT2G04880 57.692 104 44 0 459 562 248 351 3.13e-33 134
MS.gene56264.t1 AT2G04880 64.407 59 21 0 280 338 111 169 2.46e-20 95.1
MS.gene56264.t1 AT2G04880 51.220 82 35 2 281 361 284 361 2.94e-17 85.5
MS.gene56264.t1 AT2G04880 36.036 111 64 3 492 597 109 217 3.18e-14 76.3
MS.gene56264.t1 AT2G04880 57.692 104 44 0 459 562 272 375 5.03e-33 134
MS.gene56264.t1 AT2G04880 64.407 59 21 0 280 338 111 169 2.75e-20 95.1
MS.gene56264.t1 AT2G04880 51.220 82 35 2 281 361 308 385 2.96e-17 85.9
MS.gene56264.t1 AT2G04880 50.000 64 31 1 492 555 109 171 5.02e-13 72.4
MS.gene56264.t1 AT2G44745 62.353 85 31 1 475 559 126 209 6.64e-31 121
MS.gene56264.t1 AT2G44745 61.404 57 21 1 280 335 145 201 9.41e-17 80.1
MS.gene56264.t1 AT1G55600 61.628 86 33 0 470 555 283 368 1.71e-29 123
MS.gene56264.t1 AT1G55600 58.333 60 24 1 281 339 308 367 2.25e-15 79.7
MS.gene56264.t1 AT4G18170 50.435 115 46 1 451 554 118 232 1.15e-28 117
MS.gene56264.t1 AT4G18170 63.333 60 21 1 280 338 172 231 5.83e-17 83.2
MS.gene56264.t1 AT4G39410 48.462 130 50 3 443 567 184 301 1.96e-28 116
MS.gene56264.t1 AT4G39410 52.632 57 26 1 280 335 223 279 8.35e-13 70.5
MS.gene56264.t1 AT1G69310 62.195 82 31 0 469 550 122 203 2.09e-28 115
MS.gene56264.t1 AT1G69310 61.404 57 21 1 280 335 147 203 5.80e-16 79.3
MS.gene56264.t1 AT1G69310 62.195 82 31 0 469 550 122 203 2.09e-28 115
MS.gene56264.t1 AT1G69310 61.404 57 21 1 280 335 147 203 5.80e-16 79.3
MS.gene56264.t1 AT1G69310 62.195 82 31 0 469 550 122 203 2.09e-28 115
MS.gene56264.t1 AT1G69310 61.404 57 21 1 280 335 147 203 5.80e-16 79.3
MS.gene56264.t1 AT3G01080 72.857 70 18 1 278 347 203 271 2.51e-28 116
MS.gene56264.t1 AT3G01080 55.556 63 27 1 494 556 205 266 4.10e-15 77.4
MS.gene56264.t1 AT1G29860 62.821 78 29 0 478 555 120 197 2.51e-27 112
MS.gene56264.t1 AT1G29860 60.938 64 24 1 280 342 136 199 2.73e-17 83.2
MS.gene56264.t1 AT2G47260 53.535 99 44 1 478 576 158 254 2.44e-26 111
MS.gene56264.t1 AT2G47260 57.812 64 26 1 280 342 174 237 7.82e-16 80.1
MS.gene56264.t1 AT5G13080 50.000 100 50 0 453 552 26 125 3.35e-26 105
MS.gene56264.t1 AT5G13080 51.724 58 27 1 280 336 67 124 1.16e-14 72.0
MS.gene56264.t1 AT5G46350 58.750 80 33 0 480 559 169 248 7.64e-26 109
MS.gene56264.t1 AT5G46350 57.143 70 28 2 280 348 183 251 4.30e-17 83.6
MS.gene56264.t1 AT4G30935 50.485 103 50 1 455 556 291 393 1.08e-25 111
MS.gene56264.t1 AT4G30935 52.000 75 31 2 272 345 327 397 6.26e-17 84.7
MS.gene56264.t1 AT4G30935 53.623 69 30 2 271 338 159 226 5.00e-15 78.6
MS.gene56264.t1 AT3G01970 65.278 72 25 0 481 552 52 123 1.66e-25 103
MS.gene56264.t1 AT3G01970 53.125 64 27 2 280 341 65 127 5.65e-14 70.1
MS.gene56264.t1 AT5G49520 61.842 76 29 0 478 553 205 280 2.02e-25 109
MS.gene56264.t1 AT5G49520 60.000 60 23 1 280 338 221 280 9.44e-16 80.5
MS.gene56264.t1 AT5G26170 61.429 70 27 0 481 550 100 169 6.74e-25 102
MS.gene56264.t1 AT5G26170 52.632 57 26 1 280 335 113 169 1.27e-14 72.8
MS.gene56264.t1 AT4G04450 54.545 88 39 1 469 555 173 260 1.35e-24 107
MS.gene56264.t1 AT4G04450 44.565 92 49 2 250 339 168 259 1.82e-15 79.7
MS.gene56264.t1 AT5G41570 57.895 76 32 0 475 550 79 154 1.66e-24 101
MS.gene56264.t1 AT5G41570 31.373 153 101 3 186 336 5 155 3.23e-15 74.7
MS.gene56264.t1 AT5G64810 57.746 71 30 0 481 551 97 167 2.18e-24 101
MS.gene56264.t1 AT5G64810 49.123 57 28 1 280 335 110 166 5.09e-11 63.2
MS.gene56264.t1 AT4G04450 54.545 88 39 1 469 555 267 354 6.31e-24 106
MS.gene56264.t1 AT4G04450 44.565 92 49 2 250 339 262 353 4.27e-15 79.3
MS.gene56264.t1 AT2G46130 55.000 80 36 0 471 550 7 86 6.55e-24 97.4
MS.gene56264.t1 AT2G46130 63.793 58 20 1 280 336 30 87 1.43e-18 82.0
MS.gene56264.t1 AT1G64000 56.579 76 33 0 475 550 95 170 1.01e-23 99.8
MS.gene56264.t1 AT1G64000 53.448 58 26 1 280 336 114 171 1.68e-15 75.9
MS.gene56264.t1 AT1G69310 58.537 82 30 1 469 550 122 199 1.04e-23 102
MS.gene56264.t1 AT1G69310 56.140 57 20 2 280 335 147 199 2.07e-11 65.9
MS.gene56264.t1 AT4G22070 53.488 86 39 1 469 553 272 357 2.80e-23 104
MS.gene56264.t1 AT4G22070 54.098 61 26 2 281 339 298 358 3.33e-14 76.3
MS.gene56264.t1 AT4G22070 53.488 86 39 1 469 553 272 357 2.80e-23 104
MS.gene56264.t1 AT4G22070 54.098 61 26 2 281 339 298 358 3.33e-14 76.3
MS.gene56264.t1 AT4G22070 53.488 86 39 1 469 553 272 357 2.80e-23 104
MS.gene56264.t1 AT4G22070 54.098 61 26 2 281 339 298 358 3.33e-14 76.3
MS.gene56264.t1 AT4G22070 53.488 86 39 1 469 553 272 357 2.80e-23 104
MS.gene56264.t1 AT4G22070 54.098 61 26 2 281 339 298 358 3.33e-14 76.3
MS.gene56264.t1 AT3G62340 50.943 106 48 1 470 571 94 199 7.55e-23 99.8
MS.gene56264.t1 AT3G62340 56.667 60 25 1 280 338 118 177 6.70e-15 76.3
MS.gene56264.t1 AT1G62300 54.878 82 36 1 473 553 291 372 1.33e-22 102
MS.gene56264.t1 AT1G62300 54.098 61 26 2 281 339 313 373 2.52e-14 77.0
MS.gene56264.t1 AT1G68150 50.000 90 44 1 478 566 219 308 2.69e-22 100
MS.gene56264.t1 AT1G68150 53.333 60 26 2 281 338 236 295 1.25e-12 70.5
MS.gene56264.t1 AT5G15130 48.193 83 42 1 477 558 168 250 4.19e-22 100
MS.gene56264.t1 AT5G15130 46.067 89 47 1 471 558 204 292 4.72e-22 101
MS.gene56264.t1 AT1G18860 52.564 78 36 1 477 553 222 299 1.25e-21 99.8
MS.gene56264.t1 AT1G18860 53.333 60 26 2 281 338 240 299 2.93e-12 70.1
MS.gene56264.t1 AT4G01720 54.545 77 34 1 478 553 223 299 1.06e-20 96.7
MS.gene56264.t1 AT4G01720 43.299 97 51 3 247 339 204 300 8.36e-14 75.1
MS.gene56264.t1 AT2G21900 41.509 106 47 3 454 555 76 170 5.48e-20 89.4
MS.gene56264.t1 AT2G21900 50.000 60 29 1 280 338 109 168 4.39e-13 69.3
MS.gene56264.t1 AT2G23320 47.368 95 39 3 459 552 215 299 1.15e-19 90.9
MS.gene56264.t1 AT2G23320 37.931 87 51 3 251 335 212 297 9.32e-12 67.4
MS.gene56264.t1 AT4G24240 49.474 95 37 3 459 552 256 340 1.86e-19 90.9
MS.gene56264.t1 AT4G24240 35.849 106 62 4 232 335 237 338 1.82e-12 69.7
MS.gene56264.t1 AT2G46130 51.250 80 35 1 471 550 7 82 2.42e-19 84.3
MS.gene56264.t1 AT2G46130 58.621 58 19 2 280 336 30 83 4.25e-14 69.3
MS.gene56264.t1 AT5G28650 41.667 120 59 3 442 560 220 329 3.00e-19 90.1
MS.gene56264.t1 AT5G28650 52.632 57 25 2 281 335 263 319 3.14e-11 65.9
MS.gene56264.t1 AT3G04670 38.760 129 66 4 433 560 213 329 1.08e-18 88.6
MS.gene56264.t1 AT3G04670 50.847 59 27 2 281 337 263 321 4.85e-11 65.1
MS.gene56264.t1 AT4G31550 47.059 102 50 2 465 562 217 318 1.46e-18 87.8
MS.gene56264.t1 AT4G31550 39.080 87 50 3 251 335 218 303 5.96e-12 68.2
MS.gene56264.t1 AT2G24570 43.636 110 59 2 465 573 214 321 2.80e-18 87.0
MS.gene56264.t1 AT2G24570 39.080 87 50 3 251 335 215 300 7.91e-12 67.4
MS.gene56264.t1 AT4G31550 51.087 92 41 2 475 562 226 317 2.89e-18 87.0
MS.gene56264.t1 AT4G31550 43.421 76 40 3 262 335 228 302 2.03e-11 66.2
MS.gene56264.t1 AT1G80840 51.562 64 30 1 492 554 144 207 4.16e-18 86.3
MS.gene56264.t1 AT1G80840 50.820 61 28 2 280 338 146 206 2.01e-12 68.9
MS.gene56264.t1 AT5G43290 59.322 59 24 0 492 550 112 170 5.09e-18 85.5
MS.gene56264.t1 AT5G43290 58.621 58 23 1 279 335 113 170 7.88e-13 70.1
MS.gene56264.t1 AT2G30590 35.664 143 77 5 410 550 241 370 5.96e-18 87.0
MS.gene56264.t1 AT2G30590 40.659 91 51 3 251 339 285 374 6.71e-14 74.7
MS.gene56264.t1 AT4G23550 46.753 77 40 1 483 558 129 205 8.49e-18 85.5
MS.gene56264.t1 AT4G23550 49.296 71 33 3 281 349 141 210 3.59e-11 65.5
MS.gene56264.t1 AT1G69810 43.158 95 50 3 477 569 128 220 3.03e-17 84.0
MS.gene56264.t1 AT1G69810 43.056 72 38 2 281 349 146 217 1.02e-11 67.4
MS.gene56264.t1 AT1G69810 43.158 95 50 3 477 569 186 278 5.44e-17 84.0
MS.gene56264.t1 AT1G69810 43.056 72 38 2 281 349 204 275 9.36e-12 67.8
MS.gene56264.t1 AT2G25000 45.205 73 39 1 493 564 102 174 7.07e-17 80.9
MS.gene56264.t1 AT2G25000 49.180 61 29 2 280 338 103 163 3.13e-11 64.3
MS.gene56264.t1 AT2G25000 45.205 73 39 1 493 564 102 174 7.07e-17 80.9
MS.gene56264.t1 AT2G25000 49.180 61 29 2 280 338 103 163 3.13e-11 64.3
MS.gene56264.t1 AT2G25000 45.205 73 39 1 493 564 124 196 1.15e-16 80.9
MS.gene56264.t1 AT2G25000 49.180 61 29 2 280 338 125 185 4.70e-11 64.3
MS.gene56264.t1 AT2G25000 45.205 73 39 1 493 564 145 217 1.85e-16 80.5
MS.gene56264.t1 AT2G25000 49.180 61 29 2 280 338 146 206 6.87e-11 63.9
MS.gene56264.t1 AT4G31800 50.000 64 31 1 493 555 110 173 3.98e-16 79.0
MS.gene56264.t1 AT4G31800 47.541 61 30 2 280 338 111 171 6.67e-12 66.6
MS.gene56264.t1 AT4G31800 50.000 64 31 1 493 555 175 238 7.49e-16 79.7
MS.gene56264.t1 AT4G31800 47.541 61 30 2 280 338 176 236 9.23e-12 67.4
MS.gene56264.t1 AT4G01250 41.748 103 44 2 457 558 106 193 1.15e-15 79.0
MS.gene56264.t1 AT4G01250 47.887 71 34 3 281 349 129 198 1.35e-11 66.6
MS.gene56264.t1 AT2G40740 40.594 101 55 3 256 351 149 249 1.46e-15 78.6
MS.gene56264.t1 AT2G40740 40.594 101 55 3 256 351 158 258 1.78e-15 78.2
MS.gene56264.t1 AT5G52830 43.529 85 46 2 475 558 147 230 4.88e-15 77.8
MS.gene56264.t1 AT5G52830 50.685 73 33 3 279 349 164 235 4.04e-13 71.6
MS.gene56264.t1 AT1G29280 51.562 64 29 2 277 338 71 134 1.79e-14 74.7
MS.gene56264.t1 AT1G29280 47.692 65 33 1 495 558 75 139 3.52e-14 73.6
MS.gene56264.t1 AT2G34830 38.000 100 56 2 460 558 186 280 5.64e-14 75.1
MS.gene56264.t1 AT2G34830 51.667 60 27 2 281 338 216 275 6.33e-12 68.6
MS.gene56264.t1 AT1G30650 38.000 100 56 2 460 558 188 282 5.98e-14 75.1
MS.gene56264.t1 AT1G30650 50.000 60 28 2 281 338 218 277 1.81e-11 67.4
MS.gene56264.t1 AT2G34830 38.000 100 56 2 460 558 195 289 6.27e-14 75.1
MS.gene56264.t1 AT2G34830 51.667 60 27 2 281 338 225 284 6.44e-12 68.9
MS.gene56264.t1 AT2G38470 58.065 62 21 2 494 553 184 242 1.35e-13 74.3
MS.gene56264.t1 AT3G58710 47.826 69 33 2 495 560 71 139 2.58e-13 71.2
MS.gene56264.t1 AT3G58710 52.381 63 28 2 278 338 68 130 9.38e-13 69.7
MS.gene56264.t1 AT3G58710 48.387 62 31 1 495 555 72 133 2.59e-13 71.2
MS.gene56264.t1 AT3G58710 52.381 63 28 2 278 338 69 131 9.59e-13 69.7
MS.gene56264.t1 AT5G45050 47.692 65 33 1 495 558 1042 1106 1.52e-12 71.6
MS.gene56264.t1 AT5G45050 50.769 65 30 2 276 338 1037 1101 4.40e-12 70.5
MS.gene56264.t1 AT5G45050 47.692 65 33 1 495 558 1181 1245 1.75e-12 71.6
MS.gene56264.t1 AT5G45050 50.769 65 30 2 276 338 1176 1240 4.49e-12 70.5
MS.gene56264.t1 AT5G45050 47.692 65 33 1 495 558 1153 1217 1.90e-12 71.6
MS.gene56264.t1 AT5G45050 50.769 65 30 2 276 338 1148 1212 4.58e-12 70.5
MS.gene56264.t1 AT4G23810 45.902 61 29 2 278 334 156 216 2.75e-12 68.9
MS.gene56264.t1 AT5G24110 39.175 97 48 5 272 363 106 196 6.09e-12 67.8
MS.gene56264.t1 AT4G11070 43.056 72 35 3 278 343 107 178 3.35e-11 65.1
MS.gene56264.t1 AT4G11070 43.056 72 35 3 278 343 139 210 4.42e-11 65.1
MS.gene56264.t1 AT5G45260 32.710 107 63 4 250 349 1175 1279 5.63e-11 66.6
MS.gene56264.t1 AT2G46400 27.429 175 103 5 447 615 65 221 7.16e-11 64.3

Find 201 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCGACTTGGAGGAGGTTTC+GGG 0.221606 3.1:-4900509 None:intergenic
TTCAAGCCTACAACAGATTC+AGG 0.225658 3.1:+4899364 MS.gene56264:CDS
CGGCGACTTGGAGGAGGTTT+CGG 0.234020 3.1:-4900510 None:intergenic
GCAGTGGCGGTGACCTAGGC+TGG 0.244486 3.1:+4900607 MS.gene56264:CDS
TATAGATTATCTCCGTTATA+TGG 0.256932 3.1:-4900470 None:intergenic
CTTGGTTCGTTCAACCTTCC+CGG 0.258909 3.1:+4901515 MS.gene56264:CDS
AACAATTTGCAAACTCAAAA+TGG 0.274108 3.1:+4900729 MS.gene56264:CDS
CGCTACCCTTAACTTGCTTT+TGG 0.278034 3.1:-4900371 None:intergenic
ATATAGCTGGAGCTGGTAAT+TGG 0.284730 3.1:+4900649 MS.gene56264:CDS
GGTTATCGGTGGCGGAAATA+TGG 0.285913 3.1:+4901087 MS.gene56264:CDS
CTTTCTCAGCAATCCCTTCA+TGG 0.309397 3.1:+4900114 MS.gene56264:CDS
TCCTCGCAAGCAAAGCTTCC+TGG 0.313451 3.1:+4901620 MS.gene56264:CDS
GGATATAATTGGAGAAAATA+TGG 0.316349 3.1:+4900348 MS.gene56264:CDS
AAAAGACAATTCTACACATT+TGG 0.325774 3.1:+4900242 MS.gene56264:CDS
TATAACGGAGATAATCTATA+AGG 0.331910 3.1:+4900473 MS.gene56264:CDS
CATCGGAGGATGGATATAAT+TGG 0.333091 3.1:+4900337 MS.gene56264:CDS
GATGAAAATCTTGCACTAAA+TGG 0.339970 3.1:+4898255 MS.gene56264:CDS
ATGTAGTGATCACAGATTTA+AGG 0.340679 3.1:-4901334 None:intergenic
GTTGGATTGGTTACCGTATC+CGG 0.341255 3.1:-4900709 None:intergenic
CCCTGTGGTTCACCATGTTC+AGG 0.344262 3.1:-4900582 None:intergenic
AATGGAAACTTTCCTGTTGT+TGG 0.346418 3.1:-4899241 None:intergenic
TCGAGAACTCGACTTGTTCT+CGG 0.350344 3.1:-4898442 None:intergenic
GGTACTACTCACGTTGATTC+AGG 0.352096 3.1:+4900750 MS.gene56264:CDS
TCCACATTTGGTTCTCCCTT+TGG 0.354303 3.1:-4901713 None:intergenic
TCTTGCACTAAATGGTGATT+GGG 0.360621 3.1:+4898263 MS.gene56264:CDS
AACTTATTCTCTCAGGAAAC+TGG 0.362818 3.1:+4900972 MS.gene56264:intron
CACTCATGGTAGTGTATCAT+TGG 0.368402 3.1:+4900827 MS.gene56264:CDS
CATGAATCCCATTTCATTTG+CGG 0.377014 3.1:-4901687 None:intergenic
CGTGTTCCTTGCAAATTCAT+TGG 0.378555 3.1:+4898626 MS.gene56264:CDS
AACTTTCCTGTTGTTGGAGA+TGG 0.388150 3.1:-4899235 None:intergenic
GCAACGCGCCGCAAATGAAA+TGG 0.390178 3.1:+4901679 MS.gene56264:CDS
GGCGGCCTTAACATGCAAAA+TGG 0.396598 3.1:+4901752 MS.gene56264:CDS
GAACCTTGCAATGTCGGGAT+TGG 0.397116 3.1:+4901592 MS.gene56264:CDS
TGTTGTTGCTGCATCATGAA+TGG 0.397926 3.1:-4901656 None:intergenic
AACCTTGCAATGTCGGGATT+GGG 0.398700 3.1:+4901593 MS.gene56264:CDS
GCAGCTCAAGGACAAGCTTC+TGG 0.405122 3.1:+4901428 MS.gene56264:CDS
TTGTGAACTTGAGATGGTTC+AGG 0.405320 3.1:-4901476 None:intergenic
ATCTTGCACTAAATGGTGAT+TGG 0.405599 3.1:+4898262 MS.gene56264:CDS
GATAGAATTGCTGCTCGAAC+TGG 0.408486 3.1:+4898477 MS.gene56264:CDS
AAGTTTCCATTTGTTTCAAA+TGG 0.409529 3.1:+4899253 MS.gene56264:CDS
TACTACAAGTGCACCAATGC+AGG 0.412359 3.1:+4901272 MS.gene56264:CDS
ATGCCTGACCGGCGACTTGG+AGG 0.413497 3.1:-4900519 None:intergenic
ATGTTAAGGCCGCCACGTTC+AGG 0.415188 3.1:-4901743 None:intergenic
CCAAGTCGCCGGTCAGGCAT+AGG 0.416054 3.1:+4900522 MS.gene56264:CDS
TTGGATTGGTTACCGTATCC+GGG 0.416255 3.1:-4900708 None:intergenic
CAAAAGTAGCCTCCATCTTA+AGG 0.416713 3.1:+4900194 MS.gene56264:CDS
ATAACGGAGATAATCTATAA+GGG 0.422795 3.1:+4900474 MS.gene56264:CDS
CCTCCTCCAAGTCGCCGGTC+AGG 0.425165 3.1:+4900516 MS.gene56264:CDS
ATATGGCCAAAAGCAAGTTA+AGG 0.425865 3.1:+4900365 MS.gene56264:CDS
GACTCGTTGGTTGCTGGTGT+TGG 0.426208 3.1:+4900306 MS.gene56264:CDS
TCAGGATTAGCGTCCACATT+TGG 0.426942 3.1:-4901725 None:intergenic
AACGGAGACTCGTTGGTTGC+TGG 0.427288 3.1:+4900300 MS.gene56264:CDS
ACGTCCGAATTCAGAACATT+CGG 0.428312 3.1:+4898353 MS.gene56264:CDS
GGAAGCTTTGCTTGCGAGGA+AGG 0.428637 3.1:-4901617 None:intergenic
AATGGGTTCATAGGCATTCC+AGG 0.429862 3.1:-4901638 None:intergenic
ATGACCTAGCTGCTGTCTCC+CGG 0.431091 3.1:-4901534 None:intergenic
CCTTACAGTGCACCCTGCAT+TGG 0.431542 3.1:-4901285 None:intergenic
GAGGGACAAGATGGTGATTC+CGG 0.435458 3.1:+4898390 MS.gene56264:CDS
AAGAATGACTACCTTGGGTT+GGG 0.441222 3.1:-4901132 None:intergenic
CTTCCCGAATGTTCTGAATT+CGG 0.445390 3.1:-4898357 None:intergenic
TGACAGCTGATGTTGCTTCA+AGG 0.445597 3.1:-4900683 None:intergenic
ATGGTTCAGGTCTATGCATA+TGG 0.448997 3.1:-4901463 None:intergenic
GGTCATCCGCATGGCTTCTT+CGG 0.452741 3.1:+4901551 MS.gene56264:CDS
TAAAGTGAGGTTTGAATGGC+TGG 0.453770 3.1:+4898228 None:intergenic
GAGGGCCCTGAATCTGTTGT+AGG 0.453857 3.1:-4899370 None:intergenic
CCTATGCCTGACCGGCGACT+TGG 0.458013 3.1:-4900522 None:intergenic
CGTCCGAATTCAGAACATTC+GGG 0.458260 3.1:+4898354 MS.gene56264:CDS
GTTGTTGCTGCATCATGAAT+GGG 0.462753 3.1:-4901655 None:intergenic
GGAGAATCTAAAAGTGTAGT+AGG 0.463976 3.1:-4898603 None:intergenic
GTGTACTCATTCAAATTGTC+CGG 0.469086 3.1:+4900416 MS.gene56264:CDS
ATTATGAATCACATGCCTCT+TGG 0.469433 3.1:+4901797 MS.gene56264:CDS
CTGTCGAACCTTGCAATGTC+GGG 0.470366 3.1:+4901587 MS.gene56264:CDS
TATGGCCAAAAGCAAGTTAA+GGG 0.471248 3.1:+4900366 MS.gene56264:CDS
ATGTTGCCATTTGAAACAAA+TGG 0.473438 3.1:-4899259 None:intergenic
ATATCCTCGATGATGGTTAT+CGG 0.475694 3.1:+4901073 MS.gene56264:CDS
CGGAAAACTCTGCCTTAAGA+TGG 0.485915 3.1:-4900206 None:intergenic
CCAATGCAGGGTGCACTGTA+AGG 0.487294 3.1:+4901285 MS.gene56264:CDS
CAACGCGCCGCAAATGAAAT+GGG 0.487752 3.1:+4901680 MS.gene56264:CDS
GATAACTTGTATCGCTCAAG+TGG 0.489377 3.1:-4898416 None:intergenic
GGTGGCAGTGGCGGTGACCT+AGG 0.491981 3.1:+4900603 MS.gene56264:CDS
GCACAGCCATCTCCAACAAC+AGG 0.493338 3.1:+4899229 MS.gene56264:CDS
TTGGTTCGTTCAACCTTCCC+GGG 0.494017 3.1:+4901516 MS.gene56264:CDS
GTACAGAAGGGAAATATAGC+TGG 0.494656 3.1:+4900636 MS.gene56264:CDS
GAGTTTGCAAATTGTTGGAT+TGG 0.499841 3.1:-4900722 None:intergenic
TGACTGCTGGAACGAGCAGC+GGG 0.501885 3.1:-4901383 None:intergenic
TCCTGAACATGGTGAACCAC+AGG 0.504125 3.1:+4900581 MS.gene56264:CDS
TGCATCATGAATGGGTTCAT+AGG 0.504266 3.1:-4901647 None:intergenic
AACGGCATGAGGCCTTCGCT+TGG 0.513928 3.1:+4901497 MS.gene56264:CDS
AATTCAGAACATTCGGGAAG+TGG 0.514532 3.1:+4898360 MS.gene56264:CDS
CAAGTCGCCGGTCAGGCATA+GGG 0.514587 3.1:+4900523 MS.gene56264:CDS
GGTGAACCACAGGGTGGCAG+TGG 0.518041 3.1:+4900591 MS.gene56264:CDS
CCTGTCGAACCTTGCAATGT+CGG 0.519344 3.1:+4901586 MS.gene56264:CDS
ATCGAGGATATCTACTTCGC+TGG 0.520413 3.1:-4901061 None:intergenic
CAGTGGCGGTGACCTAGGCT+GGG 0.521688 3.1:+4900608 MS.gene56264:CDS
ATTCGCATTGACGTGACTGC+TGG 0.522171 3.1:-4901396 None:intergenic
TCCAGGAAGCTTTGCTTGCG+AGG 0.522306 3.1:-4901621 None:intergenic
CCGACATTGCAAGGTTCGAC+AGG 0.522335 3.1:-4901586 None:intergenic
TGGTTGACCCTATGCCTGAC+CGG 0.523542 3.1:-4900530 None:intergenic
CCTGACCGGCGACTTGGAGG+AGG 0.523850 3.1:-4900516 None:intergenic
TTCTCATGAGGGCCATATAA+CGG 0.530629 3.1:+4900458 MS.gene56264:CDS
GAACTCGACTTGTTCTCGGT+TGG 0.530653 3.1:-4898438 None:intergenic
TCAGCTGTCAACCCCGGATA+CGG 0.534204 3.1:+4900696 MS.gene56264:CDS
TGGTGTTGGCGGTACTCCAT+CGG 0.535867 3.1:+4900320 MS.gene56264:CDS
TAAGAATGACTACCTTGGGT+TGG 0.541313 3.1:-4901133 None:intergenic
CTAGCTGCTGTCTCCCGGGA+AGG 0.542522 3.1:-4901529 None:intergenic
GGAAGAGCAAGCAGATGAAG+AGG 0.543715 3.1:+4900263 MS.gene56264:CDS
AGGCTGGGCTAATGTACAGA+AGG 0.548184 3.1:+4900623 MS.gene56264:CDS
CTGAAGCTTCAACACCATGA+AGG 0.548464 3.1:-4900128 None:intergenic
ATGCTCTCTGTATTCAACCT+TGG 0.549716 3.1:-4898510 None:intergenic
GAAGCTTTGCTTGCGAGGAA+GGG 0.549966 3.1:-4901616 None:intergenic
CCAGGCGGTATAGTCAAGTA+AGG 0.550484 3.1:-4898573 None:intergenic
TCCACTTGCATGTCAGCATG+AGG 0.551146 3.1:-4900555 None:intergenic
TGTATCGCTCAAGTGGGTAC+CGG 0.551680 3.1:-4898409 None:intergenic
TCTAGTAGCTCCACTCATCT+CGG 0.552091 3.1:-4901004 None:intergenic
GGCCCAATCCCGACATTGCA+AGG 0.552372 3.1:-4901595 None:intergenic
TCAAGCCTACAACAGATTCA+GGG 0.552504 3.1:+4899365 MS.gene56264:CDS
ATGGGATTCATGTTACCAAA+GGG 0.552557 3.1:+4901698 MS.gene56264:CDS
GAACCACAGGGTGGCAGTGG+CGG 0.552598 3.1:+4900594 MS.gene56264:CDS
ACTCATGGTAGTGTATCATT+GGG 0.552943 3.1:+4900828 MS.gene56264:CDS
TCGTTGGTTGCTGGTGTTGG+CGG 0.559827 3.1:+4900309 MS.gene56264:CDS
TGACCTAGCTGCTGTCTCCC+GGG 0.564057 3.1:-4901533 None:intergenic
GTACACTTGTAGTAACTTCG+AGG 0.567336 3.1:-4900399 None:intergenic
GAGGGAGAACAAAGAGTCAA+CGG 0.570062 3.1:+4900282 MS.gene56264:CDS
TCTGTACATTAGCCCAGCCT+AGG 0.570398 3.1:-4900620 None:intergenic
AATGAAGAGGAAGACGATCA+AGG 0.570847 3.1:+4900804 MS.gene56264:CDS
GTAGTCTGAACAACAACTCT+AGG 0.571480 3.1:-4901039 None:intergenic
GAAGTAGATATCCTCGATGA+TGG 0.573669 3.1:+4901066 MS.gene56264:CDS
CCCTCATGCTGACATGCAAG+TGG 0.574660 3.1:+4900554 MS.gene56264:CDS
AAGGGAAATATAGCTGGAGC+TGG 0.574752 3.1:+4900642 MS.gene56264:CDS
CAATGAATTTGCAAGGAACA+CGG 0.575971 3.1:-4898625 None:intergenic
CGAAACCTCCTCCAAGTCGC+CGG 0.578429 3.1:+4900511 MS.gene56264:CDS
GGTAGAACTGAGGGACAAGA+TGG 0.580548 3.1:+4898381 MS.gene56264:CDS
TGAAGCTTCAACACCATGAA+GGG 0.585732 3.1:-4900127 None:intergenic
CAATTATATCCATCCTCCGA+TGG 0.586613 3.1:-4900336 None:intergenic
TCGATGATGGTTATCGGTGG+CGG 0.587391 3.1:+4901079 MS.gene56264:CDS
ATGAATCAGAGTCTAAAAGA+AGG 0.588175 3.1:+4900868 MS.gene56264:CDS
GAATCATATGCCGAGATGAG+TGG 0.589323 3.1:+4900994 MS.gene56264:CDS
GAAAGTAGAACGTTCTCATG+AGG 0.589600 3.1:+4900446 MS.gene56264:CDS
AACTCACCAATGAATTTGCA+AGG 0.592002 3.1:-4898632 None:intergenic
GGCGGTACTCCATCGGAGGA+TGG 0.594165 3.1:+4900327 MS.gene56264:CDS
ATGCCGTTGTGAACTTGAGA+TGG 0.595174 3.1:-4901482 None:intergenic
CTCAAGTTCACAACGGCATG+AGG 0.596029 3.1:+4901486 MS.gene56264:CDS
GAGAACAAGTCGAGTTCTCG+AGG 0.596736 3.1:+4898444 MS.gene56264:CDS
AACAACTCTAGGCTCGCGAA+TGG 0.599268 3.1:-4901028 None:intergenic
GACTTGGAGGAGGTTTCGGG+TGG 0.599626 3.1:-4900506 None:intergenic
GAACTGGATTTAATGCTCCA+AGG 0.600329 3.1:+4898493 MS.gene56264:CDS
CGTTGATTCAGGAGATGCAG+TGG 0.602532 3.1:+4900761 MS.gene56264:CDS
GTCTATCTAGTCCAAGTCCA+AGG 0.603219 3.1:+4898286 MS.gene56264:CDS
AATGAATTTGCAAGGAACAC+GGG 0.604026 3.1:-4898624 None:intergenic
AAAGTAGAACGTTCTCATGA+GGG 0.604575 3.1:+4900447 MS.gene56264:CDS
TCGGGAAGTGGTAGAACTGA+GGG 0.606371 3.1:+4898372 MS.gene56264:CDS
GAAGACGATCAAGGCACTCA+TGG 0.606644 3.1:+4900813 MS.gene56264:CDS
GCAACATCAGCTGTCAACCC+CGG 0.607436 3.1:+4900690 MS.gene56264:CDS
TACACTTGTAGTAACTTCGA+GGG 0.609634 3.1:-4900398 None:intergenic
TTGCATGTCAGCATGAGGGT+TGG 0.612361 3.1:-4900550 None:intergenic
CCACTTGCATGTCAGCATGA+GGG 0.613566 3.1:-4900554 None:intergenic
TAACGGAGATAATCTATAAG+GGG 0.614320 3.1:+4900475 MS.gene56264:CDS
CCTTACTTGACTATACCGCC+TGG 0.615366 3.1:+4898573 MS.gene56264:CDS
AAGAGTCAACGGAGACTCGT+TGG 0.615925 3.1:+4900293 MS.gene56264:CDS
TATGGACAGAAAGTTGTCAA+AGG 0.617805 3.1:+4901105 MS.gene56264:CDS
AATGCTTCTAACGCAGCTCA+AGG 0.620924 3.1:+4901416 MS.gene56264:CDS
GAAGAGCAAGCAGATGAAGA+GGG 0.623139 3.1:+4900264 MS.gene56264:CDS
AAAACTCTGCCTTAAGATGG+AGG 0.626789 3.1:-4900203 None:intergenic
GTGACTGCTGGAACGAGCAG+CGG 0.626891 3.1:-4901384 None:intergenic
CTTGCACTAAATGGTGATTG+GGG 0.627891 3.1:+4898264 MS.gene56264:CDS
AAAGTGAGGTTTGAATGGCT+GGG 0.630620 3.1:+4898229 None:intergenic
ACTACAAGTGCACCAATGCA+GGG 0.634462 3.1:+4901273 MS.gene56264:CDS
AATGGGATTCATGTTACCAA+AGG 0.635351 3.1:+4901697 MS.gene56264:CDS
CTTCCCGGGAGACAGCAGCT+AGG 0.636920 3.1:+4901530 MS.gene56264:CDS
TCTGTGATCACTACATACGA+GGG 0.638313 3.1:+4901341 MS.gene56264:CDS
ATCTGTGATCACTACATACG+AGG 0.641100 3.1:+4901340 MS.gene56264:CDS
TGTATCATTGGGTTATGATG+CGG 0.643412 3.1:+4900839 MS.gene56264:CDS
TCAAAGGAAATCCCAACCCA+AGG 0.645747 3.1:+4901121 MS.gene56264:CDS
TGTTGTAGGCTTGAAAGCGA+AGG 0.648946 3.1:-4899356 None:intergenic
TGGATTGGTTACCGTATCCG+GGG 0.651936 3.1:-4900707 None:intergenic
TCAATCTCAAAGAGTTGATG+CGG 0.655003 3.1:+4900152 MS.gene56264:CDS
TCCTCGATGATGGTTATCGG+TGG 0.657777 3.1:+4901076 MS.gene56264:CDS
CCTGAACATGGTGAACCACA+GGG 0.659823 3.1:+4900582 MS.gene56264:CDS
GTGCACTGTAAGGAAGCATG+TGG 0.665453 3.1:+4901295 MS.gene56264:CDS
CAAGTGGACAATCCTGAACA+TGG 0.665803 3.1:+4900570 MS.gene56264:CDS
ACCAAAGGGAGAACCAAATG+TGG 0.665868 3.1:+4901712 MS.gene56264:CDS
AACGGAGATAATCTATAAGG+GGG 0.668962 3.1:+4900476 MS.gene56264:CDS
TGTTGGCGGTACTCCATCGG+AGG 0.670376 3.1:+4900323 MS.gene56264:CDS
AGGTTGAACGAACCAAGCGA+AGG 0.670429 3.1:-4901509 None:intergenic
TTCGGGAAGTGGTAGAACTG+AGG 0.674120 3.1:+4898371 MS.gene56264:CDS
TCACCGCCACTGCCACCCTG+TGG 0.678158 3.1:-4900597 None:intergenic
GGCTGGGCTAATGTACAGAA+GGG 0.678675 3.1:+4900624 MS.gene56264:CDS
ATAACTTGTATCGCTCAAGT+GGG 0.689016 3.1:-4898415 None:intergenic
TCATTGGGTTATGATGCGGA+AGG 0.689115 3.1:+4900843 MS.gene56264:CDS
CAGCAGCTAGGTCATCCGCA+TGG 0.689731 3.1:+4901542 MS.gene56264:CDS
CTGATGATAATTCTGAGCTG+CGG 0.709325 3.1:-4899282 None:intergenic
AACAAGTCGAGTTCTCGAGG+TGG 0.724082 3.1:+4898447 MS.gene56264:CDS
TTCATGCCGAAGAAGCCATG+CGG 0.727689 3.1:-4901557 None:intergenic
GACGCTAATCCTGAACGTGG+CGG 0.732762 3.1:+4901734 MS.gene56264:CDS
AGTGTAGTAGGACTAAGACC+AGG 0.734205 3.1:-4898591 None:intergenic
GACTGCTGGAACGAGCAGCG+GGG 0.738619 3.1:-4901382 None:intergenic
GTGGACGCTAATCCTGAACG+TGG 0.739601 3.1:+4901731 MS.gene56264:CDS
GAACCATCTCAAGTTCACAA+CGG 0.751840 3.1:+4901479 MS.gene56264:CDS
GCCACCGATAACCATCATCG+AGG 0.756754 3.1:-4901077 None:intergenic
GAACATGGTGAACCACAGGG+TGG 0.772249 3.1:+4900585 MS.gene56264:CDS
GTAGTAGGACTAAGACCAGG+CGG 0.775032 3.1:-4898588 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGATTTATATATTTTTCTTC+TGG + chr3.1:4900050-4900069 MS.gene56264:intron 15.0%
!! ATATAAATCTAGTGCATATT+TGG - chr3.1:4900040-4900059 None:intergenic 20.0%
!! CAAGAAAAATCTAAACATAA+TGG + chr3.1:4899310-4899329 MS.gene56264:CDS 20.0%
!! TTAGAATGAATGATAGTTTA+AGG - chr3.1:4899499-4899518 None:intergenic 20.0%
!!! CTCTAAAGTATATGAAAAAT+TGG + chr3.1:4899585-4899604 MS.gene56264:intron 20.0%
!!! TGTAGTTTTTGTTAAAATCA+CGG - chr3.1:4899959-4899978 None:intergenic 20.0%
!!! TTTTAACAAAAACTACACTT+TGG + chr3.1:4899962-4899981 MS.gene56264:intron 20.0%
! AAAAGACAATTCTACACATT+TGG + chr3.1:4900242-4900261 MS.gene56264:CDS 25.0%
! AACAATTTGCAAACTCAAAA+TGG + chr3.1:4900729-4900748 MS.gene56264:CDS 25.0%
! AAGTTTCCATTTGTTTCAAA+TGG + chr3.1:4899253-4899272 MS.gene56264:CDS 25.0%
! ATGTAAACTTGAATTGTGTA+CGG - chr3.1:4899823-4899842 None:intergenic 25.0%
! ATGTAGTGACTAAATTAAAG+AGG + chr3.1:4899687-4899706 MS.gene56264:intron 25.0%
! ATTTACTTCTCAAATCAACA+TGG + chr3.1:4899754-4899773 MS.gene56264:intron 25.0%
! CAATTCTTCAATTTGAACAA+GGG + chr3.1:4899077-4899096 MS.gene56264:intron 25.0%
! GGATATAATTGGAGAAAATA+TGG + chr3.1:4900348-4900367 MS.gene56264:CDS 25.0%
! GTCATAATCTTAGATATTGT+CGG + chr3.1:4898861-4898880 MS.gene56264:intron 25.0%
! TACTTCATACTATTCATTGT+TGG + chr3.1:4900891-4900910 MS.gene56264:intron 25.0%
! TAGTTTAAGGACTAAATTGA+TGG - chr3.1:4899486-4899505 None:intergenic 25.0%
! TATAGATTATCTCCGTTATA+TGG - chr3.1:4900473-4900492 None:intergenic 25.0%
! TCAATTCTTCAATTTGAACA+AGG + chr3.1:4899076-4899095 MS.gene56264:intron 25.0%
! TCATAATCTTAGATATTGTC+GGG + chr3.1:4898862-4898881 MS.gene56264:intron 25.0%
! TGTAATCTTAATGTTGCAAT+TGG + chr3.1:4899042-4899061 MS.gene56264:intron 25.0%
! TGTAGTGACTAAATTAAAGA+GGG + chr3.1:4899688-4899707 MS.gene56264:intron 25.0%
! TTATGAATCTGTCTAATTTC+AGG + chr3.1:4899207-4899226 MS.gene56264:intron 25.0%
! TTGGAACTTCAATTAAAACA+CGG + chr3.1:4899981-4900000 MS.gene56264:intron 25.0%
!! ATAACGGAGATAATCTATAA+GGG + chr3.1:4900474-4900493 MS.gene56264:CDS 25.0%
!! GTTGTTCATTTTGAATATCT+TGG - chr3.1:4900955-4900974 None:intergenic 25.0%
!! TACTTTAGAGACTAAATTGA+CGG - chr3.1:4899575-4899594 None:intergenic 25.0%
!! TATAACGGAGATAATCTATA+AGG + chr3.1:4900473-4900492 MS.gene56264:CDS 25.0%
!! TTCTTTTACGATTGTAGTTT+TGG + chr3.1:4899442-4899461 MS.gene56264:intron 25.0%
!!! ATTTTGAGTTTGCAAATTGT+TGG - chr3.1:4900730-4900749 None:intergenic 25.0%
!!! CTAATGTTTTATTGCAATCT+TGG + chr3.1:4898822-4898841 MS.gene56264:intron 25.0%
!!! TTTTTTTAAAACCCTATGCA+TGG + chr3.1:4898999-4899018 MS.gene56264:intron 25.0%
AATGAACAACTTATTCTCTC+AGG + chr3.1:4900965-4900984 MS.gene56264:intron 30.0%
ATGAATCAGAGTCTAAAAGA+AGG + chr3.1:4900868-4900887 MS.gene56264:CDS 30.0%
ATGTAGTGATCACAGATTTA+AGG - chr3.1:4901337-4901356 None:intergenic 30.0%
GATGAAAATCTTGCACTAAA+TGG + chr3.1:4898255-4898274 MS.gene56264:CDS 30.0%
GTAGTGACTAAATTAAAGAG+GGG + chr3.1:4899689-4899708 MS.gene56264:intron 30.0%
TAAATATACAGCCATGCATA+GGG - chr3.1:4899013-4899032 None:intergenic 30.0%
TAACGGAGATAATCTATAAG+GGG + chr3.1:4900475-4900494 MS.gene56264:CDS 30.0%
TAATGTATTGTGCTTCATCT+AGG - chr3.1:4898755-4898774 None:intergenic 30.0%
TAGTCCTTCACATCTTAATA+GGG + chr3.1:4899614-4899633 MS.gene56264:intron 30.0%
TAGTGACTAAATTAAAGAGG+GGG + chr3.1:4899690-4899709 MS.gene56264:intron 30.0%
TGTATTCATCTGCAAATTGA+AGG - chr3.1:4900088-4900107 None:intergenic 30.0%
TTAAATATACAGCCATGCAT+AGG - chr3.1:4899014-4899033 None:intergenic 30.0%
TTAGTCCTTCACATCTTAAT+AGG + chr3.1:4899613-4899632 MS.gene56264:intron 30.0%
TTCTAGCAGTCTAGAAAAAA+GGG - chr3.1:4898313-4898332 None:intergenic 30.0%
! AGTTTTTGTTAAAATCACGG+TGG - chr3.1:4899956-4899975 None:intergenic 30.0%
! ATGTTGCCATTTGAAACAAA+TGG - chr3.1:4899262-4899281 None:intergenic 30.0%
! CGTTCTACTTTCTTTTTAAC+CGG - chr3.1:4900438-4900457 None:intergenic 30.0%
! GTCTACATTTTCAAATGAAG+AGG + chr3.1:4900791-4900810 MS.gene56264:CDS 30.0%
! TGATGATGCATACATTTCAT+AGG + chr3.1:4898779-4898798 MS.gene56264:intron 30.0%
! TGTGTAGAATTGTCTTTTTG+AGG - chr3.1:4900240-4900259 None:intergenic 30.0%
! TTTTATTGCAATCTTGGTGA+CGG + chr3.1:4898828-4898847 MS.gene56264:intron 30.0%
!! ATAGCTGAATGTTTCTGTTT+TGG + chr3.1:4901238-4901257 MS.gene56264:intron 30.0%
!! TAGCTGAATGTTTCTGTTTT+GGG + chr3.1:4901239-4901258 MS.gene56264:intron 30.0%
!! TGACGGATTTCATATACTTT+AGG - chr3.1:4899558-4899577 None:intergenic 30.0%
!! TTTAATTGATAGCCTTGTCT+AGG + chr3.1:4899874-4899893 MS.gene56264:intron 30.0%
!!! CAGCTATATTTTGACACAAT+GGG - chr3.1:4901225-4901244 None:intergenic 30.0%
!!! CATCATGGTTTTAGATGTTT+CGG - chr3.1:4898947-4898966 None:intergenic 30.0%
!!! TCAGCTATATTTTGACACAA+TGG - chr3.1:4901226-4901245 None:intergenic 30.0%
!!! TGACGGGTTTTATATACTTT+AGG + chr3.1:4899647-4899666 MS.gene56264:intron 30.0%
AAAGTAGAACGTTCTCATGA+GGG + chr3.1:4900447-4900466 MS.gene56264:CDS 35.0%
AACGGAGATAATCTATAAGG+GGG + chr3.1:4900476-4900495 MS.gene56264:CDS 35.0%
AACTCACCAATGAATTTGCA+AGG - chr3.1:4898635-4898654 None:intergenic 35.0%
AACTTATTCTCTCAGGAAAC+TGG + chr3.1:4900972-4900991 MS.gene56264:intron 35.0%
AATCGACGTGATTCAAATCA+TGG + chr3.1:4898918-4898937 MS.gene56264:intron 35.0%
AATGAATTTGCAAGGAACAC+GGG - chr3.1:4898627-4898646 None:intergenic 35.0%
AATGGAAACTTTCCTGTTGT+TGG - chr3.1:4899244-4899263 None:intergenic 35.0%
AATGGGATTCATGTTACCAA+AGG + chr3.1:4901697-4901716 MS.gene56264:CDS 35.0%
AGACAGATTCATAACTCAGT+AGG - chr3.1:4899201-4899220 None:intergenic 35.0%
ATATGGCCAAAAGCAAGTTA+AGG + chr3.1:4900365-4900384 MS.gene56264:CDS 35.0%
ATCGATAAGAATGACTACCT+TGG - chr3.1:4901141-4901160 None:intergenic 35.0%
ATCTTGCACTAAATGGTGAT+TGG + chr3.1:4898262-4898281 MS.gene56264:CDS 35.0%
ATGGGATTCATGTTACCAAA+GGG + chr3.1:4901698-4901717 MS.gene56264:CDS 35.0%
ATTATGAATCACATGCCTCT+TGG + chr3.1:4901797-4901816 MS.gene56264:CDS 35.0%
CAATGAATTTGCAAGGAACA+CGG - chr3.1:4898628-4898647 None:intergenic 35.0%
CATATATCATTGCCTAGACA+AGG - chr3.1:4899889-4899908 None:intergenic 35.0%
CATGAATCCCATTTCATTTG+CGG - chr3.1:4901690-4901709 None:intergenic 35.0%
CTTCTAGCAGTCTAGAAAAA+AGG - chr3.1:4898314-4898333 None:intergenic 35.0%
CTTGTCTAGGCAATGATATA+TGG + chr3.1:4899887-4899906 MS.gene56264:intron 35.0%
GAGTTTGCAAATTGTTGGAT+TGG - chr3.1:4900725-4900744 None:intergenic 35.0%
GTGTACTCATTCAAATTGTC+CGG + chr3.1:4900416-4900435 MS.gene56264:CDS 35.0%
TACACTTGTAGTAACTTCGA+GGG - chr3.1:4900401-4900420 None:intergenic 35.0%
TATGGACAGAAAGTTGTCAA+AGG + chr3.1:4901105-4901124 MS.gene56264:CDS 35.0%
TATGGCCAAAAGCAAGTTAA+GGG + chr3.1:4900366-4900385 MS.gene56264:CDS 35.0%
TCGATAAGAATGACTACCTT+GGG - chr3.1:4901140-4901159 None:intergenic 35.0%
TCTTGCACTAAATGGTGATT+GGG + chr3.1:4898263-4898282 MS.gene56264:CDS 35.0%
TGGATGCATGTTTAGATTGA+AGG + chr3.1:4899907-4899926 MS.gene56264:intron 35.0%
TGTATCATTGGGTTATGATG+CGG + chr3.1:4900839-4900858 MS.gene56264:CDS 35.0%
TGTTGCAATTGGATGATCTA+TGG + chr3.1:4899053-4899072 MS.gene56264:intron 35.0%
! ACTCATGGTAGTGTATCATT+GGG + chr3.1:4900828-4900847 MS.gene56264:CDS 35.0%
! ATAACTTGTATCGCTCAAGT+GGG - chr3.1:4898418-4898437 None:intergenic 35.0%
! ATATCCTCGATGATGGTTAT+CGG + chr3.1:4901073-4901092 MS.gene56264:CDS 35.0%
! CTAGTGCATATTTGGAATAG+AGG - chr3.1:4900032-4900051 None:intergenic 35.0%
! GGAGAATCTAAAAGTGTAGT+AGG - chr3.1:4898606-4898625 None:intergenic 35.0%
! TAGAAAGCACATTTGTGTTG+TGG + chr3.1:4898672-4898691 MS.gene56264:intron 35.0%
!! AATAGGGTGGACTAAATTGA+CGG + chr3.1:4899630-4899649 MS.gene56264:intron 35.0%
!! AGCTGAATGTTTCTGTTTTG+GGG + chr3.1:4901240-4901259 MS.gene56264:intron 35.0%
!! ATGAGCCATTTTGCATGTTA+AGG - chr3.1:4901760-4901779 None:intergenic 35.0%
!! GTAGAATTGTCTTTTTGAGG+TGG - chr3.1:4900237-4900256 None:intergenic 35.0%
!! TCAATCTCAAAGAGTTGATG+CGG + chr3.1:4900152-4900171 MS.gene56264:CDS 35.0%
AAAACTCTGCCTTAAGATGG+AGG - chr3.1:4900206-4900225 None:intergenic 40.0%
AACTTTCCTGTTGTTGGAGA+TGG - chr3.1:4899238-4899257 None:intergenic 40.0%
AAGAATGACTACCTTGGGTT+GGG - chr3.1:4901135-4901154 None:intergenic 40.0%
AATGAAGAGGAAGACGATCA+AGG + chr3.1:4900804-4900823 MS.gene56264:CDS 40.0%
AATTCAGAACATTCGGGAAG+TGG + chr3.1:4898360-4898379 MS.gene56264:CDS 40.0%
ACCAGCACCTTGATAAAAAG+AGG - chr3.1:4899392-4899411 None:intergenic 40.0%
ACGTCCGAATTCAGAACATT+CGG + chr3.1:4898353-4898372 MS.gene56264:CDS 40.0%
AGTCTAGAAAAAAGGGACCT+TGG - chr3.1:4898306-4898325 None:intergenic 40.0%
ATATAGCTGGAGCTGGTAAT+TGG + chr3.1:4900649-4900668 MS.gene56264:CDS 40.0%
ATCTGTGATCACTACATACG+AGG + chr3.1:4901340-4901359 MS.gene56264:CDS 40.0%
ATGCTCTCTGTATTCAACCT+TGG - chr3.1:4898513-4898532 None:intergenic 40.0%
ATGGTTCAGGTCTATGCATA+TGG - chr3.1:4901466-4901485 None:intergenic 40.0%
CAAAAGTAGCCTCCATCTTA+AGG + chr3.1:4900194-4900213 MS.gene56264:CDS 40.0%
CAATTATATCCATCCTCCGA+TGG - chr3.1:4900339-4900358 None:intergenic 40.0%
CAGATTCATAACTCAGTAGG+AGG - chr3.1:4899198-4899217 None:intergenic 40.0%
CATCGGAGGATGGATATAAT+TGG + chr3.1:4900337-4900356 MS.gene56264:CDS 40.0%
CCAGCACCTTGATAAAAAGA+GGG - chr3.1:4899391-4899410 None:intergenic 40.0%
CGTGTTCCTTGCAAATTCAT+TGG + chr3.1:4898626-4898645 MS.gene56264:CDS 40.0%
CTGATGATAATTCTGAGCTG+CGG - chr3.1:4899285-4899304 None:intergenic 40.0%
CTTGCACTAAATGGTGATTG+GGG + chr3.1:4898264-4898283 MS.gene56264:CDS 40.0%
GAAAGTAGAACGTTCTCATG+AGG + chr3.1:4900446-4900465 MS.gene56264:CDS 40.0%
GAACCATCTCAAGTTCACAA+CGG + chr3.1:4901479-4901498 MS.gene56264:CDS 40.0%
GAACTGGATTTAATGCTCCA+AGG + chr3.1:4898493-4898512 MS.gene56264:CDS 40.0%
GAAGTAGATATCCTCGATGA+TGG + chr3.1:4901066-4901085 MS.gene56264:CDS 40.0%
GACCACAAAATTCGACAGAT+TGG - chr3.1:4901203-4901222 None:intergenic 40.0%
GTACACTTGTAGTAACTTCG+AGG - chr3.1:4900402-4900421 None:intergenic 40.0%
GTACAGAAGGGAAATATAGC+TGG + chr3.1:4900636-4900655 MS.gene56264:CDS 40.0%
GTAGTCTGAACAACAACTCT+AGG - chr3.1:4901042-4901061 None:intergenic 40.0%
GTTGTTGCTGCATCATGAAT+GGG - chr3.1:4901658-4901677 None:intergenic 40.0%
TAAGAATGACTACCTTGGGT+TGG - chr3.1:4901136-4901155 None:intergenic 40.0%
TCAAGCCTACAACAGATTCA+GGG + chr3.1:4899365-4899384 MS.gene56264:CDS 40.0%
TCCACCCTATTAAGATGTGA+AGG - chr3.1:4899621-4899640 None:intergenic 40.0%
TCCTTCACATCTTAATAGGG+TGG + chr3.1:4899617-4899636 MS.gene56264:intron 40.0%
TCTGTGATCACTACATACGA+GGG + chr3.1:4901341-4901360 MS.gene56264:CDS 40.0%
TGAAGCTTCAACACCATGAA+GGG - chr3.1:4900130-4900149 None:intergenic 40.0%
TGTTGTTGCTGCATCATGAA+TGG - chr3.1:4901659-4901678 None:intergenic 40.0%
TTCAAGCCTACAACAGATTC+AGG + chr3.1:4899364-4899383 MS.gene56264:CDS 40.0%
TTCTCATGAGGGCCATATAA+CGG + chr3.1:4900458-4900477 MS.gene56264:CDS 40.0%
TTGTGAACTTGAGATGGTTC+AGG - chr3.1:4901479-4901498 None:intergenic 40.0%
! CACTCATGGTAGTGTATCAT+TGG + chr3.1:4900827-4900846 MS.gene56264:CDS 40.0%
! CTTCCCGAATGTTCTGAATT+CGG - chr3.1:4898360-4898379 None:intergenic 40.0%
! GATAACTTGTATCGCTCAAG+TGG - chr3.1:4898419-4898438 None:intergenic 40.0%
! GTCCAATCTGTCGAATTTTG+TGG + chr3.1:4901198-4901217 MS.gene56264:intron 40.0%
! TGCATCATGAATGGGTTCAT+AGG - chr3.1:4901650-4901669 None:intergenic 40.0%
!! ATAGGGTGGACTAAATTGAC+GGG + chr3.1:4899631-4899650 MS.gene56264:intron 40.0%
AACCTTGCAATGTCGGGATT+GGG + chr3.1:4901593-4901612 MS.gene56264:CDS 45.0%
AAGAGGGGGTGATAGTTTGA+TGG + chr3.1:4899704-4899723 MS.gene56264:intron 45.0%
AAGGGAAATATAGCTGGAGC+TGG + chr3.1:4900642-4900661 MS.gene56264:CDS 45.0%
AATGCTTCTAACGCAGCTCA+AGG + chr3.1:4901416-4901435 MS.gene56264:CDS 45.0%
AATGTCCGTGACCACAATCT+AGG - chr3.1:4898976-4898995 None:intergenic 45.0%
ACCAAAGGGAGAACCAAATG+TGG + chr3.1:4901712-4901731 MS.gene56264:CDS 45.0%
ACTACAAGTGCACCAATGCA+GGG + chr3.1:4901273-4901292 MS.gene56264:CDS 45.0%
AGTGTAGTAGGACTAAGACC+AGG - chr3.1:4898594-4898613 None:intergenic 45.0%
ATCGAGGATATCTACTTCGC+TGG - chr3.1:4901064-4901083 None:intergenic 45.0%
ATGCCGTTGTGAACTTGAGA+TGG - chr3.1:4901485-4901504 None:intergenic 45.0%
CAAGTGGACAATCCTGAACA+TGG + chr3.1:4900570-4900589 MS.gene56264:CDS 45.0%
CAATCTAGGTTGCGACATCA+TGG - chr3.1:4898962-4898981 None:intergenic 45.0%
CGGAAAACTCTGCCTTAAGA+TGG - chr3.1:4900209-4900228 None:intergenic 45.0%
CGTCCGAATTCAGAACATTC+GGG + chr3.1:4898354-4898373 MS.gene56264:CDS 45.0%
CTGAAGCTTCAACACCATGA+AGG - chr3.1:4900131-4900150 None:intergenic 45.0%
CTTTCTCAGCAATCCCTTCA+TGG + chr3.1:4900114-4900133 MS.gene56264:CDS 45.0%
GAAAAAAGGGACCTTGGACT+TGG - chr3.1:4898300-4898319 None:intergenic 45.0%
GAAGAGCAAGCAGATGAAGA+GGG + chr3.1:4900264-4900283 MS.gene56264:CDS 45.0%
GAATCATATGCCGAGATGAG+TGG + chr3.1:4900994-4901013 MS.gene56264:CDS 45.0%
GAGGGAGAACAAAGAGTCAA+CGG + chr3.1:4900282-4900301 MS.gene56264:CDS 45.0%
GATAGAATTGCTGCTCGAAC+TGG + chr3.1:4898477-4898496 MS.gene56264:CDS 45.0%
GTCTATCTAGTCCAAGTCCA+AGG + chr3.1:4898286-4898305 MS.gene56264:CDS 45.0%
TACTACAAGTGCACCAATGC+AGG + chr3.1:4901272-4901291 MS.gene56264:CDS 45.0%
TCAAAGGAAATCCCAACCCA+AGG + chr3.1:4901121-4901140 MS.gene56264:CDS 45.0%
TCATTGGGTTATGATGCGGA+AGG + chr3.1:4900843-4900862 MS.gene56264:CDS 45.0%
TCTAGTAGCTCCACTCATCT+CGG - chr3.1:4901007-4901026 None:intergenic 45.0%
TGATGTCGCAACCTAGATTG+TGG + chr3.1:4898962-4898981 MS.gene56264:intron 45.0%
TGTTGTAGGCTTGAAAGCGA+AGG - chr3.1:4899359-4899378 None:intergenic 45.0%
! AATGGGTTCATAGGCATTCC+AGG - chr3.1:4901641-4901660 None:intergenic 45.0%
! CCCTCTTTTTATCAAGGTGC+TGG + chr3.1:4899388-4899407 MS.gene56264:CDS 45.0%
! TCAGGATTAGCGTCCACATT+TGG - chr3.1:4901728-4901747 None:intergenic 45.0%
! TCAGGGCCCTCTTTTTATCA+AGG + chr3.1:4899382-4899401 MS.gene56264:CDS 45.0%
! TCGAGAACTCGACTTGTTCT+CGG - chr3.1:4898445-4898464 None:intergenic 45.0%
! TGACAGCTGATGTTGCTTCA+AGG - chr3.1:4900686-4900705 None:intergenic 45.0%
!! GGTACTACTCACGTTGATTC+AGG + chr3.1:4900750-4900769 MS.gene56264:CDS 45.0%
!! GTTGGATTGGTTACCGTATC+CGG - chr3.1:4900712-4900731 None:intergenic 45.0%
!! TCCACATTTGGTTCTCCCTT+TGG - chr3.1:4901716-4901735 None:intergenic 45.0%
!! TTGGATTGGTTACCGTATCC+GGG - chr3.1:4900711-4900730 None:intergenic 45.0%
!!! ATGTTTCTGTTTTGGGGTGC+AGG + chr3.1:4901246-4901265 MS.gene56264:intron 45.0%
!!! CGCTACCCTTAACTTGCTTT+TGG - chr3.1:4900374-4900393 None:intergenic 45.0%
!! TATTATTTATATATAGTTTA+GGG - chr3.1:4899528-4899547 None:intergenic 5.0%
!! TTATTATTTATATATAGTTT+AGG - chr3.1:4899529-4899548 None:intergenic 5.0%
!!! TTTTTTTTCAAAAATAAAAA+AGG - chr3.1:4900921-4900940 None:intergenic 5.0%
AACAACTCTAGGCTCGCGAA+TGG - chr3.1:4901031-4901050 None:intergenic 50.0%
AACAAGTCGAGTTCTCGAGG+TGG + chr3.1:4898447-4898466 MS.gene56264:CDS 50.0%
AAGAGTCAACGGAGACTCGT+TGG + chr3.1:4900293-4900312 MS.gene56264:CDS 50.0%
AGGCTGGGCTAATGTACAGA+AGG + chr3.1:4900623-4900642 MS.gene56264:CDS 50.0%
AGGTTGAACGAACCAAGCGA+AGG - chr3.1:4901512-4901531 None:intergenic 50.0%
CAACGCGCCGCAAATGAAAT+GGG + chr3.1:4901680-4901699 MS.gene56264:CDS 50.0%
CCACTTGCATGTCAGCATGA+GGG - chr3.1:4900557-4900576 None:intergenic 50.0%
CCAGGCGGTATAGTCAAGTA+AGG - chr3.1:4898576-4898595 None:intergenic 50.0%
CCTGAACATGGTGAACCACA+GGG + chr3.1:4900582-4900601 MS.gene56264:CDS 50.0%
CCTGTCGAACCTTGCAATGT+CGG + chr3.1:4901586-4901605 MS.gene56264:CDS 50.0%
CCTTACTTGACTATACCGCC+TGG + chr3.1:4898573-4898592 MS.gene56264:CDS 50.0%
CGCAACCTAGATTGTGGTCA+CGG + chr3.1:4898968-4898987 MS.gene56264:intron 50.0%
CTCAAGTTCACAACGGCATG+AGG + chr3.1:4901486-4901505 MS.gene56264:CDS 50.0%
CTGTCGAACCTTGCAATGTC+GGG + chr3.1:4901587-4901606 MS.gene56264:CDS 50.0%
GAACCTTGCAATGTCGGGAT+TGG + chr3.1:4901592-4901611 MS.gene56264:CDS 50.0%
GAAGCTTTGCTTGCGAGGAA+GGG - chr3.1:4901619-4901638 None:intergenic 50.0%
GAGAACAAGTCGAGTTCTCG+AGG + chr3.1:4898444-4898463 MS.gene56264:CDS 50.0%
GAGGGACAAGATGGTGATTC+CGG + chr3.1:4898390-4898409 MS.gene56264:CDS 50.0%
GGAAGAGCAAGCAGATGAAG+AGG + chr3.1:4900263-4900282 MS.gene56264:CDS 50.0%
GGCGGCCTTAACATGCAAAA+TGG + chr3.1:4901752-4901771 MS.gene56264:CDS 50.0%
GGCTGGGCTAATGTACAGAA+GGG + chr3.1:4900624-4900643 MS.gene56264:CDS 50.0%
GGTAGAACTGAGGGACAAGA+TGG + chr3.1:4898381-4898400 MS.gene56264:CDS 50.0%
GTAGTAGGACTAAGACCAGG+CGG - chr3.1:4898591-4898610 None:intergenic 50.0%
TCCACTTGCATGTCAGCATG+AGG - chr3.1:4900558-4900577 None:intergenic 50.0%
TCCTGAACATGGTGAACCAC+AGG + chr3.1:4900581-4900600 MS.gene56264:CDS 50.0%
TCGGGAAGTGGTAGAACTGA+GGG + chr3.1:4898372-4898391 MS.gene56264:CDS 50.0%
TCTGTACATTAGCCCAGCCT+AGG - chr3.1:4900623-4900642 None:intergenic 50.0%
TGTATCGCTCAAGTGGGTAC+CGG - chr3.1:4898412-4898431 None:intergenic 50.0%
TTCATGCCGAAGAAGCCATG+CGG - chr3.1:4901560-4901579 None:intergenic 50.0%
TTCGGGAAGTGGTAGAACTG+AGG + chr3.1:4898371-4898390 MS.gene56264:CDS 50.0%
TTGCATGTCAGCATGAGGGT+TGG - chr3.1:4900553-4900572 None:intergenic 50.0%
! ATTCGCATTGACGTGACTGC+TGG - chr3.1:4901399-4901418 None:intergenic 50.0%
! CTTGGTTCGTTCAACCTTCC+CGG + chr3.1:4901515-4901534 MS.gene56264:CDS 50.0%
! GAACTCGACTTGTTCTCGGT+TGG - chr3.1:4898441-4898460 None:intergenic 50.0%
! GAAGACGATCAAGGCACTCA+TGG + chr3.1:4900813-4900832 MS.gene56264:CDS 50.0%
! GTGCACTGTAAGGAAGCATG+TGG + chr3.1:4901295-4901314 MS.gene56264:CDS 50.0%
! TCCTCGATGATGGTTATCGG+TGG + chr3.1:4901076-4901095 MS.gene56264:CDS 50.0%
! TCGATGATGGTTATCGGTGG+CGG + chr3.1:4901079-4901098 MS.gene56264:CDS 50.0%
! TTGGTTCGTTCAACCTTCCC+GGG + chr3.1:4901516-4901535 MS.gene56264:CDS 50.0%
!! CGTTGATTCAGGAGATGCAG+TGG + chr3.1:4900761-4900780 MS.gene56264:CDS 50.0%
!! GGTTATCGGTGGCGGAAATA+TGG + chr3.1:4901087-4901106 MS.gene56264:CDS 50.0%
!! TGGATTGGTTACCGTATCCG+GGG - chr3.1:4900710-4900729 None:intergenic 50.0%
!!! GTCTTTTTGAGGTGGCGAGT+CGG - chr3.1:4900229-4900248 None:intergenic 50.0%
ATGACCTAGCTGCTGTCTCC+CGG - chr3.1:4901537-4901556 None:intergenic 55.0%
ATGTTAAGGCCGCCACGTTC+AGG - chr3.1:4901746-4901765 None:intergenic 55.0%
CCAATGCAGGGTGCACTGTA+AGG + chr3.1:4901285-4901304 MS.gene56264:CDS 55.0%
CCCTCATGCTGACATGCAAG+TGG + chr3.1:4900554-4900573 MS.gene56264:CDS 55.0%
CCCTGTGGTTCACCATGTTC+AGG - chr3.1:4900585-4900604 None:intergenic 55.0%
CCGACATTGCAAGGTTCGAC+AGG - chr3.1:4901589-4901608 None:intergenic 55.0%
CCTTACAGTGCACCCTGCAT+TGG - chr3.1:4901288-4901307 None:intergenic 55.0%
GAACATGGTGAACCACAGGG+TGG + chr3.1:4900585-4900604 MS.gene56264:CDS 55.0%
GACGCTAATCCTGAACGTGG+CGG + chr3.1:4901734-4901753 MS.gene56264:CDS 55.0%
GAGGGCCCTGAATCTGTTGT+AGG - chr3.1:4899373-4899392 None:intergenic 55.0%
GCAACATCAGCTGTCAACCC+CGG + chr3.1:4900690-4900709 MS.gene56264:CDS 55.0%
GCAACGCGCCGCAAATGAAA+TGG + chr3.1:4901679-4901698 MS.gene56264:CDS 55.0%
GCACAGCCATCTCCAACAAC+AGG + chr3.1:4899229-4899248 MS.gene56264:CDS 55.0%
GCAGCTCAAGGACAAGCTTC+TGG + chr3.1:4901428-4901447 MS.gene56264:CDS 55.0%
GCCACCGATAACCATCATCG+AGG - chr3.1:4901080-4901099 None:intergenic 55.0%
GGAAGCTTTGCTTGCGAGGA+AGG - chr3.1:4901620-4901639 None:intergenic 55.0%
GGTCATCCGCATGGCTTCTT+CGG + chr3.1:4901551-4901570 MS.gene56264:CDS 55.0%
GTGGACGCTAATCCTGAACG+TGG + chr3.1:4901731-4901750 MS.gene56264:CDS 55.0%
TCAGCTGTCAACCCCGGATA+CGG + chr3.1:4900696-4900715 MS.gene56264:CDS 55.0%
TCCAGGAAGCTTTGCTTGCG+AGG - chr3.1:4901624-4901643 None:intergenic 55.0%
TCCTCGCAAGCAAAGCTTCC+TGG + chr3.1:4901620-4901639 MS.gene56264:CDS 55.0%
TGGTTGACCCTATGCCTGAC+CGG - chr3.1:4900533-4900552 None:intergenic 55.0%
! AACGGAGACTCGTTGGTTGC+TGG + chr3.1:4900300-4900319 MS.gene56264:CDS 55.0%
! GACTCGTTGGTTGCTGGTGT+TGG + chr3.1:4900306-4900325 MS.gene56264:CDS 55.0%
! TCGTTGGTTGCTGGTGTTGG+CGG + chr3.1:4900309-4900328 MS.gene56264:CDS 55.0%
!! TGCAATCTTGGTGACGGCTG+CGG + chr3.1:4898834-4898853 MS.gene56264:intron 55.0%
!! TGGTGTTGGCGGTACTCCAT+CGG + chr3.1:4900320-4900339 MS.gene56264:CDS 55.0%
AACGGCATGAGGCCTTCGCT+TGG + chr3.1:4901497-4901516 MS.gene56264:CDS 60.0%
CAAGTCGCCGGTCAGGCATA+GGG + chr3.1:4900523-4900542 MS.gene56264:CDS 60.0%
CAGCAGCTAGGTCATCCGCA+TGG + chr3.1:4901542-4901561 MS.gene56264:CDS 60.0%
CGAAACCTCCTCCAAGTCGC+CGG + chr3.1:4900511-4900530 MS.gene56264:CDS 60.0%
GACTTGGAGGAGGTTTCGGG+TGG - chr3.1:4900509-4900528 None:intergenic 60.0%
GGCCCAATCCCGACATTGCA+AGG - chr3.1:4901598-4901617 None:intergenic 60.0%
GTGACTGCTGGAACGAGCAG+CGG - chr3.1:4901387-4901406 None:intergenic 60.0%
TGACCTAGCTGCTGTCTCCC+GGG - chr3.1:4901536-4901555 None:intergenic 60.0%
TGACTGCTGGAACGAGCAGC+GGG - chr3.1:4901386-4901405 None:intergenic 60.0%
TGTTGGCGGTACTCCATCGG+AGG + chr3.1:4900323-4900342 MS.gene56264:CDS 60.0%
! CGGCGACTTGGAGGAGGTTT+CGG - chr3.1:4900513-4900532 None:intergenic 60.0%
! GGCGACTTGGAGGAGGTTTC+GGG - chr3.1:4900512-4900531 None:intergenic 60.0%
CAGTGGCGGTGACCTAGGCT+GGG + chr3.1:4900608-4900627 MS.gene56264:CDS 65.0%
CCAAGTCGCCGGTCAGGCAT+AGG + chr3.1:4900522-4900541 MS.gene56264:CDS 65.0%
CCTATGCCTGACCGGCGACT+TGG - chr3.1:4900525-4900544 None:intergenic 65.0%
CTAGCTGCTGTCTCCCGGGA+AGG - chr3.1:4901532-4901551 None:intergenic 65.0%
CTTCCCGGGAGACAGCAGCT+AGG + chr3.1:4901530-4901549 MS.gene56264:CDS 65.0%
GAACCACAGGGTGGCAGTGG+CGG + chr3.1:4900594-4900613 MS.gene56264:CDS 65.0%
GACTGCTGGAACGAGCAGCG+GGG - chr3.1:4901385-4901404 None:intergenic 65.0%
GGCGGTACTCCATCGGAGGA+TGG + chr3.1:4900327-4900346 MS.gene56264:CDS 65.0%
GGTGAACCACAGGGTGGCAG+TGG + chr3.1:4900591-4900610 MS.gene56264:CDS 65.0%
! ATGCCTGACCGGCGACTTGG+AGG - chr3.1:4900522-4900541 None:intergenic 65.0%
CCTCCTCCAAGTCGCCGGTC+AGG + chr3.1:4900516-4900535 MS.gene56264:CDS 70.0%
GCAGTGGCGGTGACCTAGGC+TGG + chr3.1:4900607-4900626 MS.gene56264:CDS 70.0%
GGTGGCAGTGGCGGTGACCT+AGG + chr3.1:4900603-4900622 MS.gene56264:CDS 70.0%
TCACCGCCACTGCCACCCTG+TGG - chr3.1:4900600-4900619 None:intergenic 70.0%
! CCTGACCGGCGACTTGGAGG+AGG - chr3.1:4900519-4900538 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 4898243 4901832 4898243 ID=MS.gene56264
chr3.1 mRNA 4898243 4901832 4898243 ID=MS.gene56264.t1;Parent=MS.gene56264
chr3.1 exon 4898243 4898647 4898243 ID=MS.gene56264.t1.exon1;Parent=MS.gene56264.t1
chr3.1 CDS 4898243 4898647 4898243 ID=cds.MS.gene56264.t1;Parent=MS.gene56264.t1
chr3.1 exon 4899229 4899417 4899229 ID=MS.gene56264.t1.exon2;Parent=MS.gene56264.t1
chr3.1 CDS 4899229 4899417 4899229 ID=cds.MS.gene56264.t1;Parent=MS.gene56264.t1
chr3.1 exon 4900099 4900889 4900099 ID=MS.gene56264.t1.exon3;Parent=MS.gene56264.t1
chr3.1 CDS 4900099 4900889 4900099 ID=cds.MS.gene56264.t1;Parent=MS.gene56264.t1
chr3.1 exon 4900987 4901142 4900987 ID=MS.gene56264.t1.exon4;Parent=MS.gene56264.t1
chr3.1 CDS 4900987 4901142 4900987 ID=cds.MS.gene56264.t1;Parent=MS.gene56264.t1
chr3.1 exon 4901268 4901832 4901268 ID=MS.gene56264.t1.exon5;Parent=MS.gene56264.t1
chr3.1 CDS 4901268 4901832 4901268 ID=cds.MS.gene56264.t1;Parent=MS.gene56264.t1
Gene Sequence

>MS.gene56264

ATGGCTGGGATTGATGAAAATCTTGCACTAAATGGTGATTGGGGTCTATCTAGTCCAAGTCCAAGGTCCCTTTTTTCTAGACTGCTAGAAGAAGATAATAATAATGTATTACGTCCGAATTCAGAACATTCGGGAAGTGGTAGAACTGAGGGACAAGATGGTGATTCCGGTACCCACTTGAGCGATACAAGTTATCCAACCGAGAACAAGTCGAGTTCTCGAGGTGGTCTTGTTGATAGAATTGCTGCTCGAACTGGATTTAATGCTCCAAGGTTGAATACAGAGAGCATTAGATCTACTGAACTCTCACTCAATTCTGAGATTCAGTCACCTTACTTGACTATACCGCCTGGTCTTAGTCCTACTACACTTTTAGATTCTCCCGTGTTCCTTGCAAATTCATTGGTGAGTTCTATGTTTGAATGATTTTAGAAAGCACATTTGTGTTGTGGCTTGTTTATTTGTTTATCAATTTTGTTGTTTATTCTCTGAAGTTGTTTTTATTAGATCCTAGATGAAGCACAATACATTATTGCTGATGATGCATACATTTCATAGGATAGACAACACTATGTAGAGCTAATGTTTTATTGCAATCTTGGTGACGGCTGCGGTCATGTCATAATCTTAGATATTGTCGGGAGAATCACAATTAAATGCTGCTGATGCAATTTAAATCGACGTGATTCAAATCATGGTCTCCGAAACATCTAAAACCATGATGTCGCAACCTAGATTGTGGTCACGGACATTTTTTTTTTTTAAAACCCTATGCATGGCTGTATATTTAACACTTTTATGTAATCTTAATGTTGCAATTGGATGATCTATGGTCAATTCTTCAATTTGAACAAGGGTTCTAATAGATGATTTAGTTTTTCTGTGACTTTATCTCATTTCACTTTTCTGATGTTATAGTAAACTGAAACATGATTCTATTGAAATTGTTATTCCTCCTACTGAGTTATGAATCTGTCTAATTTCAGGCACAGCCATCTCCAACAACAGGAAAGTTTCCATTTGTTTCAAATGGCAACATCCGCAGCTCAGAATTATCATCAGATGTTCAAGAAAAATCTAAACATAATGGCTTTAATGATATTTATGCATCGTCCTTCGCTTTCAAGCCTACAACAGATTCAGGGCCCTCTTTTTATCAAGGTGCTGGTAGAAATGTAAGCACATTCTTATTTTTTATTTTCTTTTACGATTGTAGTTTTGGATTCTCTTATTGAATAAACCATCAATTTAGTCCTTAAACTATCATTCATTCTAATTTAGTCCCTAAACTATATATAAATAATAAGTAGTTCCTAAAGTATATGAAATCCGTCAATTTAGTCTCTAAAGTATATGAAAAATTGGTCAATTTAGTCCTTCACATCTTAATAGGGTGGACTAAATTGACGGGTTTTATATACTTTAGGAACTACTTATTATATATATGTAGTGACTAAATTAAAGAGGGGGTGATAGTTTGATGGTTTATTCTTCATTTATTTGTTGAAACAATTTACTTCTCAAATCAACATGGCAAGATATTTATGCGCACAGTCAAGTTATTGCAGTTATGTATACCGTACACAATTCAAGTTTACATATGTTCTAATACACATAGTACGTGACTTGTATTTAATTGATAGCCTTGTCTAGGCAATGATATATGGATGCATGTTTAGATTGAAGGTGAGTTTAATAGAATCAAATGTGCCACCGTGATTTTAACAAAAACTACACTTTGGAACTTCAATTAAAACACGGTGTTACTGTGATTTCATCAAACTCTCCTCTATTCCAAATATGCACTAGATTTATATATTTTTCTTCTGGTCATTTAGTCTTCCTTCAATTTGCAGATGAATACAACTACACTTTCTCAGCAATCCCTTCATGGTGTTGAAGCTTCAGTTCAATCTCAAAGAGTTGATGCGGTCAATGTTCAAACTGAGAACAAAAGTAGCCTCCATCTTAAGGCAGAGTTTTCCGACTCGCCACCTCAAAAAGACAATTCTACACATTTGGAAGAGCAAGCAGATGAAGAGGGAGAACAAAGAGTCAACGGAGACTCGTTGGTTGCTGGTGTTGGCGGTACTCCATCGGAGGATGGATATAATTGGAGAAAATATGGCCAAAAGCAAGTTAAGGGTAGCGAGTACCCTCGAAGTTACTACAAGTGTACTCATTCAAATTGTCCGGTTAAAAAGAAAGTAGAACGTTCTCATGAGGGCCATATAACGGAGATAATCTATAAGGGGGCACACAACCACCCGAAACCTCCTCCAAGTCGCCGGTCAGGCATAGGGTCAACCAACCCTCATGCTGACATGCAAGTGGACAATCCTGAACATGGTGAACCACAGGGTGGCAGTGGCGGTGACCTAGGCTGGGCTAATGTACAGAAGGGAAATATAGCTGGAGCTGGTAATTGGAAGCATGACAACCTTGAAGCAACATCAGCTGTCAACCCCGGATACGGTAACCAATCCAACAATTTGCAAACTCAAAATGGTACTACTCACGTTGATTCAGGAGATGCAGTGGATCGCTCGTCTACATTTTCAAATGAAGAGGAAGACGATCAAGGCACTCATGGTAGTGTATCATTGGGTTATGATGCGGAAGGAGATGAATCAGAGTCTAAAAGAAGGTACTTCATACTATTCATTGTTGGTGCTCCTTTTTTATTTTTGAAAAAAAAAAAATATCTGTCCAAGATATTCAAAATGAACAACTTATTCTCTCAGGAAACTGGAATCATATGCCGAGATGAGTGGAGCTACTAGAGCCATTCGCGAGCCTAGAGTTGTTGTTCAGACTACCAGCGAAGTAGATATCCTCGATGATGGTTATCGGTGGCGGAAATATGGACAGAAAGTTGTCAAAGGAAATCCCAACCCAAGGTAGTCATTCTTATCGATTGCAATCATTATCTTTCTCTTTTTATACATGCGCTCAGTCCAATCTGTCGAATTTTGTGGTCCCATTGTGTCAAAATATAGCTGAATGTTTCTGTTTTGGGGTGCAGGAGTTACTACAAGTGCACCAATGCAGGGTGCACTGTAAGGAAGCATGTGGAGAGAGCATCACATGACCTTAAATCTGTGATCACTACATACGAGGGAAAGCACAATCACGATGTCCCCGCTGCTCGTTCCAGCAGTCACGTCAATGCGAATGCTTCTAACGCAGCTCAAGGACAAGCTTCTGGTCTTCTTCAAAACCATATGCATAGACCTGAACCATCTCAAGTTCACAACGGCATGAGGCCTTCGCTTGGTTCGTTCAACCTTCCCGGGAGACAGCAGCTAGGTCATCCGCATGGCTTCTTCGGCATGAATCAACACCTGTCGAACCTTGCAATGTCGGGATTGGGCCCTTCCTCGCAAGCAAAGCTTCCTGGAATGCCTATGAACCCATTCATGATGCAGCAACAACAGCAACGCGCCGCAAATGAAATGGGATTCATGTTACCAAAGGGAGAACCAAATGTGGACGCTAATCCTGAACGTGGCGGCCTTAACATGCAAAATGGCTCATCATCAATGTATCAAGATATTATGAATCACATGCCTCTTGGACCTCACATGTAA
Protein sequence

>MS.gene56264.t1

MAGIDENLALNGDWGLSSPSPRSLFSRLLEEDNNNVLRPNSEHSGSGRTEGQDGDSGTHLSDTSYPTENKSSSRGGLVDRIAARTGFNAPRLNTESIRSTELSLNSEIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFPFVSNGNIRSSELSSDVQEKSKHNGFNDIYASSFAFKPTTDSGPSFYQGAGRNMNTTTLSQQSLHGVEASVQSQRVDAVNVQTENKSSLHLKAEFSDSPPQKDNSTHLEEQADEEGEQRVNGDSLVAGVGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHSNCPVKKKVERSHEGHITEIIYKGAHNHPKPPPSRRSGIGSTNPHADMQVDNPEHGEPQGGSGGDLGWANVQKGNIAGAGNWKHDNLEATSAVNPGYGNQSNNLQTQNGTTHVDSGDAVDRSSTFSNEEEDDQGTHGSVSLGYDAEGDESESKRRKLESYAEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARSSSHVNANASNAAQGQASGLLQNHMHRPEPSQVHNGMRPSLGSFNLPGRQQLGHPHGFFGMNQHLSNLAMSGLGPSSQAKLPGMPMNPFMMQQQQQRAANEMGFMLPKGEPNVDANPERGGLNMQNGSSSMYQDIMNHMPLGPHM