Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56527.t1 | ADK23915.1 | 99.3 | 271 | 2 | 0 | 1 | 271 | 1 | 271 | 3.60E-158 | 567.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56527.t1 | K4BWV2 | 58.1 | 277 | 100 | 6 | 1 | 263 | 1 | 275 | 8.3e-87 | 321.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56527.t1 | D9J0A6 | 99.3 | 271 | 2 | 0 | 1 | 271 | 1 | 271 | 2.6e-158 | 567.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene56527.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56527.t1 | MTR_4g081870 | 97.794 | 272 | 4 | 2 | 1 | 271 | 1 | 271 | 0.0 | 551 |
MS.gene56527.t1 | MTR_5g041940 | 70.930 | 258 | 64 | 5 | 8 | 259 | 2 | 254 | 1.06e-130 | 371 |
MS.gene56527.t1 | MTR_2g093810 | 66.474 | 173 | 56 | 1 | 3 | 173 | 8 | 180 | 3.00e-82 | 250 |
MS.gene56527.t1 | MTR_7g100990 | 62.766 | 188 | 61 | 3 | 8 | 188 | 10 | 195 | 5.95e-81 | 247 |
MS.gene56527.t1 | MTR_2157s0010 | 61.905 | 189 | 64 | 2 | 3 | 183 | 2 | 190 | 2.02e-80 | 243 |
MS.gene56527.t1 | MTR_7g085220 | 55.310 | 226 | 80 | 5 | 7 | 211 | 6 | 231 | 3.87e-80 | 245 |
MS.gene56527.t1 | MTR_2g080010 | 61.290 | 186 | 58 | 4 | 2 | 173 | 5 | 190 | 3.27e-79 | 243 |
MS.gene56527.t1 | MTR_4g089135 | 62.766 | 188 | 43 | 4 | 1 | 161 | 1 | 188 | 1.68e-77 | 239 |
MS.gene56527.t1 | MTR_8g094580 | 64.516 | 155 | 54 | 1 | 8 | 162 | 6 | 159 | 5.89e-73 | 225 |
MS.gene56527.t1 | MTR_3g088110 | 63.522 | 159 | 56 | 2 | 4 | 162 | 2 | 158 | 4.32e-72 | 223 |
MS.gene56527.t1 | MTR_2g079990 | 64.706 | 153 | 50 | 1 | 9 | 161 | 16 | 164 | 5.00e-71 | 222 |
MS.gene56527.t1 | MTR_8g059170 | 47.431 | 253 | 115 | 6 | 9 | 254 | 14 | 255 | 5.24e-71 | 221 |
MS.gene56527.t1 | MTR_3g096920 | 63.226 | 155 | 55 | 2 | 8 | 162 | 6 | 158 | 1.19e-68 | 214 |
MS.gene56527.t1 | MTR_2g079990 | 54.802 | 177 | 56 | 1 | 9 | 161 | 16 | 192 | 1.11e-66 | 212 |
MS.gene56527.t1 | MTR_3g096920 | 50.785 | 191 | 57 | 2 | 8 | 162 | 6 | 195 | 1.43e-62 | 200 |
MS.gene56527.t1 | MTR_6g084430 | 46.190 | 210 | 101 | 2 | 9 | 212 | 5 | 208 | 3.87e-60 | 193 |
MS.gene56527.t1 | MTR_2g064090 | 57.419 | 155 | 61 | 3 | 9 | 161 | 6 | 157 | 1.09e-59 | 193 |
MS.gene56527.t1 | MTR_4g108760 | 54.717 | 159 | 70 | 1 | 8 | 166 | 16 | 172 | 4.04e-59 | 192 |
MS.gene56527.t1 | MTR_6g477900 | 46.231 | 199 | 97 | 5 | 9 | 201 | 6 | 200 | 1.28e-58 | 187 |
MS.gene56527.t1 | MTR_6g012670 | 51.786 | 168 | 79 | 1 | 1 | 168 | 12 | 177 | 1.29e-58 | 189 |
MS.gene56527.t1 | MTR_7g005280 | 59.119 | 159 | 54 | 3 | 9 | 165 | 15 | 164 | 9.55e-58 | 185 |
MS.gene56527.t1 | MTR_2g062730 | 47.644 | 191 | 90 | 3 | 1 | 187 | 2 | 186 | 1.04e-57 | 188 |
MS.gene56527.t1 | MTR_3g435150 | 55.696 | 158 | 68 | 1 | 9 | 166 | 16 | 171 | 3.03e-57 | 185 |
MS.gene56527.t1 | MTR_8g467490 | 49.738 | 191 | 83 | 5 | 11 | 190 | 16 | 204 | 3.26e-57 | 188 |
MS.gene56527.t1 | MTR_4g035590 | 39.493 | 276 | 143 | 7 | 3 | 266 | 2 | 265 | 9.21e-57 | 186 |
MS.gene56527.t1 | MTR_3g070030 | 51.977 | 177 | 78 | 3 | 8 | 183 | 18 | 188 | 4.19e-56 | 184 |
MS.gene56527.t1 | MTR_5g040420 | 54.658 | 161 | 63 | 3 | 11 | 163 | 16 | 174 | 4.76e-56 | 185 |
MS.gene56527.t1 | MTR_6g011860 | 45.673 | 208 | 105 | 4 | 1 | 202 | 7 | 212 | 5.53e-56 | 185 |
MS.gene56527.t1 | MTR_3g109340 | 52.941 | 170 | 70 | 3 | 1 | 166 | 12 | 175 | 8.32e-56 | 183 |
MS.gene56527.t1 | MTR_3g109340 | 51.765 | 170 | 73 | 3 | 1 | 166 | 12 | 176 | 1.09e-55 | 183 |
MS.gene56527.t1 | MTR_4g101680 | 47.283 | 184 | 88 | 2 | 4 | 184 | 2 | 179 | 1.20e-55 | 183 |
MS.gene56527.t1 | MTR_2g078700 | 53.416 | 161 | 71 | 2 | 7 | 165 | 21 | 179 | 1.84e-55 | 183 |
MS.gene56527.t1 | MTR_4g036030 | 51.235 | 162 | 70 | 2 | 4 | 162 | 2 | 157 | 4.76e-55 | 181 |
MS.gene56527.t1 | MTR_1g096430 | 53.797 | 158 | 64 | 3 | 7 | 161 | 5 | 156 | 7.24e-55 | 180 |
MS.gene56527.t1 | MTR_5g021710 | 50.617 | 162 | 71 | 2 | 4 | 162 | 3 | 158 | 2.36e-54 | 179 |
MS.gene56527.t1 | MTR_8g024480 | 44.660 | 206 | 100 | 5 | 7 | 201 | 13 | 215 | 2.57e-54 | 181 |
MS.gene56527.t1 | MTR_5g076850 | 54.839 | 155 | 64 | 2 | 9 | 161 | 6 | 156 | 1.08e-53 | 184 |
MS.gene56527.t1 | MTR_1g008740 | 51.445 | 173 | 70 | 5 | 1 | 166 | 17 | 182 | 1.29e-53 | 178 |
MS.gene56527.t1 | MTR_1g008740 | 52.761 | 163 | 65 | 4 | 9 | 166 | 13 | 168 | 1.34e-53 | 177 |
MS.gene56527.t1 | MTR_3g064580 | 54.839 | 155 | 65 | 3 | 9 | 161 | 6 | 157 | 2.41e-53 | 183 |
MS.gene56527.t1 | MTR_7g085260 | 53.165 | 158 | 68 | 2 | 8 | 161 | 16 | 171 | 3.01e-53 | 177 |
MS.gene56527.t1 | MTR_5g012080 | 49.123 | 171 | 77 | 4 | 7 | 173 | 5 | 169 | 1.96e-52 | 174 |
MS.gene56527.t1 | MTR_8g076110 | 49.045 | 157 | 71 | 2 | 9 | 162 | 6 | 156 | 2.73e-52 | 173 |
MS.gene56527.t1 | MTR_6g032770 | 39.163 | 263 | 134 | 8 | 8 | 262 | 17 | 261 | 5.84e-51 | 171 |
MS.gene56527.t1 | MTR_7g011130 | 47.647 | 170 | 74 | 2 | 12 | 168 | 22 | 189 | 8.91e-51 | 170 |
MS.gene56527.t1 | MTR_5g090970 | 51.572 | 159 | 69 | 3 | 11 | 161 | 20 | 178 | 2.15e-50 | 168 |
MS.gene56527.t1 | MTR_8g099750 | 50.307 | 163 | 74 | 4 | 7 | 165 | 12 | 171 | 3.94e-50 | 165 |
MS.gene56527.t1 | MTR_2g064470 | 48.428 | 159 | 77 | 3 | 3 | 161 | 5 | 158 | 1.66e-49 | 166 |
MS.gene56527.t1 | MTR_4g134460 | 51.316 | 152 | 67 | 3 | 11 | 161 | 56 | 201 | 2.03e-49 | 169 |
MS.gene56527.t1 | MTR_7g097090 | 44.318 | 176 | 88 | 3 | 7 | 180 | 8 | 175 | 2.13e-49 | 165 |
MS.gene56527.t1 | MTR_1g069805 | 46.061 | 165 | 76 | 4 | 5 | 167 | 6 | 159 | 3.92e-49 | 164 |
MS.gene56527.t1 | MTR_5g090970 | 51.572 | 159 | 68 | 4 | 11 | 161 | 20 | 177 | 8.99e-49 | 164 |
MS.gene56527.t1 | MTR_7g011120 | 46.429 | 168 | 81 | 2 | 8 | 168 | 7 | 172 | 1.20e-48 | 163 |
MS.gene56527.t1 | MTR_2g068880 | 50.920 | 163 | 68 | 5 | 11 | 161 | 24 | 186 | 2.23e-48 | 163 |
MS.gene56527.t1 | MTR_5g014300 | 49.398 | 166 | 68 | 3 | 7 | 163 | 4 | 162 | 7.51e-48 | 162 |
MS.gene56527.t1 | MTR_3g116070 | 55.882 | 136 | 57 | 2 | 2 | 134 | 16 | 151 | 1.18e-47 | 162 |
MS.gene56527.t1 | MTR_3g098810 | 51.852 | 162 | 70 | 3 | 7 | 162 | 12 | 171 | 1.55e-47 | 158 |
MS.gene56527.t1 | MTR_2g068920 | 51.220 | 164 | 66 | 4 | 11 | 161 | 23 | 185 | 4.44e-47 | 159 |
MS.gene56527.t1 | MTR_1g090720 | 49.080 | 163 | 79 | 2 | 7 | 165 | 40 | 202 | 1.43e-46 | 162 |
MS.gene56527.t1 | MTR_5g069030 | 51.875 | 160 | 67 | 3 | 7 | 162 | 23 | 176 | 1.89e-46 | 164 |
MS.gene56527.t1 | MTR_4g098630 | 48.810 | 168 | 75 | 4 | 7 | 168 | 4 | 166 | 2.49e-46 | 157 |
MS.gene56527.t1 | MTR_4g075980 | 48.171 | 164 | 73 | 2 | 11 | 171 | 17 | 171 | 1.47e-45 | 155 |
MS.gene56527.t1 | MTR_8g094580 | 66.019 | 103 | 34 | 1 | 60 | 162 | 4 | 105 | 2.68e-45 | 152 |
MS.gene56527.t1 | MTR_1g097300 | 47.134 | 157 | 77 | 2 | 11 | 165 | 21 | 173 | 3.59e-45 | 160 |
MS.gene56527.t1 | MTR_3g093050 | 50.955 | 157 | 67 | 3 | 9 | 161 | 22 | 172 | 9.28e-45 | 159 |
MS.gene56527.t1 | MTR_3g093050 | 50.955 | 157 | 67 | 3 | 9 | 161 | 22 | 172 | 1.16e-44 | 159 |
MS.gene56527.t1 | MTR_3g096140 | 44.586 | 157 | 81 | 3 | 11 | 165 | 9 | 161 | 3.22e-44 | 151 |
MS.gene56527.t1 | MTR_0036s0150 | 48.428 | 159 | 72 | 5 | 11 | 165 | 7 | 159 | 3.41e-44 | 157 |
MS.gene56527.t1 | MTR_1g090723 | 47.468 | 158 | 76 | 4 | 11 | 165 | 10 | 163 | 3.98e-44 | 158 |
MS.gene56527.t1 | MTR_2g086880 | 47.799 | 159 | 71 | 2 | 3 | 160 | 12 | 159 | 7.05e-44 | 155 |
MS.gene56527.t1 | MTR_2g086880 | 47.799 | 159 | 71 | 2 | 3 | 160 | 12 | 159 | 9.16e-44 | 156 |
MS.gene56527.t1 | MTR_3g093040 | 47.500 | 160 | 68 | 3 | 9 | 161 | 108 | 258 | 9.47e-44 | 150 |
MS.gene56527.t1 | MTR_1g090723 | 47.468 | 158 | 75 | 4 | 11 | 165 | 10 | 162 | 1.06e-43 | 156 |
MS.gene56527.t1 | MTR_1g090723 | 47.468 | 158 | 75 | 4 | 11 | 165 | 10 | 162 | 1.12e-43 | 157 |
MS.gene56527.t1 | MTR_3g096140 | 44.586 | 157 | 81 | 3 | 11 | 165 | 9 | 161 | 1.66e-43 | 151 |
MS.gene56527.t1 | MTR_3g070040 | 47.701 | 174 | 78 | 4 | 13 | 183 | 12 | 175 | 2.93e-43 | 150 |
MS.gene56527.t1 | MTR_3g098810 | 50.327 | 153 | 70 | 2 | 7 | 155 | 12 | 162 | 3.57e-43 | 145 |
MS.gene56527.t1 | MTR_8g063550 | 45.000 | 160 | 82 | 3 | 8 | 165 | 5 | 160 | 2.01e-42 | 148 |
MS.gene56527.t1 | MTR_8g063550 | 45.000 | 160 | 82 | 3 | 8 | 165 | 5 | 160 | 2.52e-42 | 150 |
MS.gene56527.t1 | MTR_8g063550 | 45.000 | 160 | 82 | 3 | 8 | 165 | 5 | 160 | 2.93e-42 | 150 |
MS.gene56527.t1 | MTR_8g093580 | 43.125 | 160 | 85 | 3 | 8 | 165 | 5 | 160 | 8.04e-40 | 144 |
MS.gene56527.t1 | MTR_4g094302 | 40.764 | 157 | 81 | 3 | 9 | 161 | 11 | 159 | 2.13e-37 | 130 |
MS.gene56527.t1 | MTR_4g052620 | 44.654 | 159 | 77 | 5 | 9 | 159 | 5 | 160 | 3.99e-36 | 129 |
MS.gene56527.t1 | MTR_2g086690 | 43.312 | 157 | 81 | 4 | 10 | 159 | 5 | 160 | 6.94e-36 | 129 |
MS.gene56527.t1 | MTR_4g094302 | 45.312 | 128 | 60 | 2 | 9 | 134 | 11 | 130 | 2.06e-35 | 124 |
MS.gene56527.t1 | MTR_7g105170 | 39.181 | 171 | 96 | 4 | 9 | 171 | 4 | 174 | 2.47e-35 | 127 |
MS.gene56527.t1 | MTR_8g023840 | 50.769 | 130 | 58 | 4 | 8 | 132 | 10 | 138 | 1.43e-34 | 129 |
MS.gene56527.t1 | MTR_3g096140 | 40.972 | 144 | 79 | 3 | 24 | 165 | 1 | 140 | 7.43e-34 | 125 |
MS.gene56527.t1 | MTR_8g023930 | 43.125 | 160 | 72 | 6 | 9 | 161 | 24 | 171 | 2.04e-32 | 124 |
MS.gene56527.t1 | MTR_8g093790 | 40.741 | 162 | 72 | 5 | 1 | 162 | 2 | 139 | 2.05e-30 | 112 |
MS.gene56527.t1 | MTR_8g023900 | 43.871 | 155 | 72 | 6 | 12 | 161 | 196 | 340 | 2.43e-30 | 118 |
MS.gene56527.t1 | MTR_8g023900 | 40.373 | 161 | 83 | 6 | 9 | 164 | 12 | 164 | 4.17e-30 | 117 |
MS.gene56527.t1 | MTR_8g023860 | 41.615 | 161 | 75 | 7 | 5 | 158 | 8 | 156 | 3.16e-29 | 114 |
MS.gene56527.t1 | MTR_8g023880 | 33.047 | 233 | 114 | 9 | 1 | 214 | 1 | 210 | 9.36e-26 | 102 |
MS.gene56527.t1 | MTR_3g096400 | 31.401 | 207 | 119 | 7 | 8 | 198 | 6 | 205 | 2.79e-25 | 100 |
MS.gene56527.t1 | MTR_7g070140 | 56.962 | 79 | 32 | 1 | 62 | 138 | 17 | 95 | 1.27e-23 | 93.6 |
MS.gene56527.t1 | MTR_7g083330 | 28.743 | 167 | 109 | 6 | 1 | 161 | 10 | 172 | 1.44e-17 | 79.0 |
MS.gene56527.t1 | MTR_7g083360 | 29.927 | 137 | 89 | 5 | 3 | 136 | 4 | 136 | 1.88e-16 | 75.1 |
MS.gene56527.t1 | MTR_7g083370 | 28.571 | 133 | 89 | 4 | 3 | 132 | 4 | 133 | 2.15e-16 | 74.3 |
MS.gene56527.t1 | MTR_7g070150 | 53.571 | 56 | 19 | 2 | 106 | 161 | 9 | 57 | 2.74e-14 | 67.4 |
MS.gene56527.t1 | MTR_7g116460 | 31.073 | 177 | 97 | 8 | 15 | 181 | 11 | 172 | 2.01e-12 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56527.t1 | AT1G69490 | 66.667 | 225 | 65 | 3 | 1 | 215 | 1 | 225 | 5.15e-110 | 318 |
MS.gene56527.t1 | AT3G04070 | 55.909 | 220 | 79 | 5 | 7 | 208 | 8 | 227 | 2.55e-79 | 243 |
MS.gene56527.t1 | AT1G61110 | 69.136 | 162 | 41 | 2 | 9 | 161 | 16 | 177 | 1.90e-78 | 240 |
MS.gene56527.t1 | AT3G04070 | 52.966 | 236 | 77 | 6 | 7 | 208 | 8 | 243 | 6.93e-78 | 240 |
MS.gene56527.t1 | AT3G15510 | 62.573 | 171 | 55 | 2 | 13 | 174 | 21 | 191 | 8.80e-76 | 235 |
MS.gene56527.t1 | AT1G77450 | 61.585 | 164 | 61 | 2 | 1 | 164 | 2 | 163 | 1.73e-73 | 225 |
MS.gene56527.t1 | AT4G27410 | 51.613 | 217 | 86 | 4 | 9 | 211 | 14 | 225 | 5.01e-73 | 226 |
MS.gene56527.t1 | AT3G15500 | 62.275 | 167 | 55 | 2 | 9 | 175 | 14 | 172 | 6.07e-73 | 226 |
MS.gene56527.t1 | AT1G52890 | 63.924 | 158 | 53 | 1 | 5 | 162 | 10 | 163 | 1.15e-72 | 225 |
MS.gene56527.t1 | AT1G01720 | 63.871 | 155 | 55 | 1 | 8 | 162 | 6 | 159 | 3.91e-71 | 221 |
MS.gene56527.t1 | AT5G08790 | 62.581 | 155 | 56 | 2 | 9 | 162 | 7 | 160 | 1.96e-68 | 213 |
MS.gene56527.t1 | AT4G27410 | 47.210 | 233 | 89 | 4 | 9 | 211 | 14 | 242 | 2.47e-68 | 214 |
MS.gene56527.t1 | AT1G52880 | 68.153 | 157 | 42 | 2 | 13 | 161 | 21 | 177 | 1.06e-67 | 213 |
MS.gene56527.t1 | AT5G63790 | 61.290 | 155 | 58 | 2 | 9 | 162 | 60 | 213 | 6.11e-67 | 211 |
MS.gene56527.t1 | AT5G63790 | 61.290 | 155 | 58 | 2 | 9 | 162 | 50 | 203 | 6.19e-67 | 211 |
MS.gene56527.t1 | AT5G39610 | 54.545 | 165 | 73 | 1 | 1 | 165 | 12 | 174 | 5.26e-60 | 192 |
MS.gene56527.t1 | AT5G07680 | 55.280 | 161 | 70 | 1 | 8 | 168 | 2 | 160 | 1.02e-59 | 192 |
MS.gene56527.t1 | AT5G07680 | 53.892 | 167 | 75 | 1 | 2 | 168 | 10 | 174 | 1.19e-59 | 192 |
MS.gene56527.t1 | AT5G61430 | 54.658 | 161 | 71 | 1 | 8 | 168 | 15 | 173 | 2.06e-59 | 192 |
MS.gene56527.t1 | AT2G33480 | 58.333 | 156 | 58 | 3 | 8 | 163 | 14 | 162 | 1.18e-58 | 188 |
MS.gene56527.t1 | AT2G33480 | 56.410 | 156 | 59 | 2 | 8 | 163 | 14 | 160 | 1.30e-58 | 187 |
MS.gene56527.t1 | AT5G13180 | 58.125 | 160 | 57 | 4 | 8 | 165 | 13 | 164 | 6.85e-58 | 185 |
MS.gene56527.t1 | AT3G18400 | 51.899 | 158 | 71 | 1 | 9 | 166 | 5 | 157 | 7.77e-58 | 187 |
MS.gene56527.t1 | AT2G24430 | 55.280 | 161 | 63 | 3 | 9 | 166 | 16 | 170 | 8.13e-57 | 185 |
MS.gene56527.t1 | AT2G24430 | 55.280 | 161 | 63 | 3 | 9 | 166 | 16 | 170 | 8.13e-57 | 185 |
MS.gene56527.t1 | AT4G36160 | 47.312 | 186 | 88 | 3 | 1 | 182 | 1 | 180 | 1.09e-56 | 186 |
MS.gene56527.t1 | AT4G36160 | 47.312 | 186 | 88 | 3 | 1 | 182 | 1 | 180 | 1.09e-56 | 186 |
MS.gene56527.t1 | AT4G36160 | 47.312 | 186 | 88 | 3 | 1 | 182 | 5 | 184 | 1.13e-56 | 186 |
MS.gene56527.t1 | AT3G29035 | 53.333 | 165 | 75 | 1 | 1 | 165 | 16 | 178 | 1.75e-56 | 184 |
MS.gene56527.t1 | AT3G15170 | 55.414 | 157 | 66 | 2 | 7 | 161 | 18 | 172 | 2.18e-56 | 183 |
MS.gene56527.t1 | AT2G18060 | 45.789 | 190 | 92 | 4 | 1 | 187 | 1 | 182 | 2.33e-56 | 185 |
MS.gene56527.t1 | AT2G18060 | 45.789 | 190 | 92 | 4 | 1 | 187 | 1 | 182 | 2.33e-56 | 185 |
MS.gene56527.t1 | AT3G17730 | 50.588 | 170 | 78 | 3 | 9 | 176 | 6 | 171 | 2.79e-56 | 181 |
MS.gene56527.t1 | AT1G33280 | 51.190 | 168 | 72 | 2 | 3 | 167 | 2 | 162 | 8.97e-56 | 182 |
MS.gene56527.t1 | AT4G10350 | 40.417 | 240 | 125 | 5 | 1 | 236 | 1 | 226 | 1.25e-55 | 182 |
MS.gene56527.t1 | AT1G65910 | 49.697 | 165 | 77 | 2 | 9 | 171 | 6 | 166 | 3.04e-55 | 188 |
MS.gene56527.t1 | AT5G53950 | 53.049 | 164 | 73 | 2 | 6 | 167 | 14 | 175 | 3.47e-55 | 182 |
MS.gene56527.t1 | AT1G62700 | 48.370 | 184 | 82 | 4 | 7 | 184 | 5 | 181 | 8.70e-55 | 182 |
MS.gene56527.t1 | AT1G62700 | 48.370 | 184 | 82 | 4 | 7 | 184 | 5 | 181 | 8.70e-55 | 182 |
MS.gene56527.t1 | AT1G76420 | 51.829 | 164 | 68 | 3 | 2 | 161 | 15 | 171 | 1.55e-54 | 179 |
MS.gene56527.t1 | AT2G46770 | 44.344 | 221 | 104 | 6 | 7 | 208 | 14 | 234 | 2.21e-54 | 180 |
MS.gene56527.t1 | AT2G43000 | 46.269 | 201 | 89 | 3 | 11 | 211 | 20 | 201 | 3.05e-54 | 177 |
MS.gene56527.t1 | AT1G12260 | 46.961 | 181 | 87 | 2 | 7 | 184 | 5 | 179 | 3.24e-54 | 179 |
MS.gene56527.t1 | AT5G39820 | 51.744 | 172 | 60 | 4 | 11 | 161 | 22 | 191 | 3.30e-54 | 179 |
MS.gene56527.t1 | AT1G71930 | 48.171 | 164 | 76 | 2 | 1 | 161 | 1 | 158 | 4.72e-54 | 178 |
MS.gene56527.t1 | AT1G71930 | 48.171 | 164 | 76 | 2 | 1 | 161 | 1 | 158 | 4.72e-54 | 178 |
MS.gene56527.t1 | AT3G04060 | 45.894 | 207 | 98 | 5 | 8 | 213 | 19 | 212 | 5.99e-54 | 178 |
MS.gene56527.t1 | AT1G12260 | 46.961 | 181 | 87 | 2 | 7 | 184 | 5 | 179 | 7.29e-54 | 179 |
MS.gene56527.t1 | AT5G17260 | 54.839 | 155 | 65 | 3 | 9 | 161 | 6 | 157 | 7.62e-54 | 181 |
MS.gene56527.t1 | AT5G18270 | 52.147 | 163 | 75 | 2 | 8 | 169 | 20 | 180 | 1.27e-53 | 177 |
MS.gene56527.t1 | AT1G79580 | 52.532 | 158 | 64 | 3 | 9 | 162 | 17 | 167 | 1.99e-53 | 177 |
MS.gene56527.t1 | AT1G79580 | 52.532 | 158 | 64 | 3 | 9 | 162 | 17 | 167 | 1.99e-53 | 177 |
MS.gene56527.t1 | AT1G79580 | 52.532 | 158 | 64 | 3 | 9 | 162 | 17 | 167 | 1.99e-53 | 177 |
MS.gene56527.t1 | AT1G79580 | 52.532 | 158 | 64 | 3 | 9 | 162 | 17 | 167 | 1.99e-53 | 177 |
MS.gene56527.t1 | AT1G79580 | 52.532 | 158 | 64 | 3 | 9 | 162 | 17 | 167 | 1.99e-53 | 177 |
MS.gene56527.t1 | AT5G18270 | 51.534 | 163 | 76 | 2 | 8 | 169 | 20 | 180 | 3.94e-53 | 176 |
MS.gene56527.t1 | AT3G03200 | 53.548 | 155 | 67 | 3 | 9 | 161 | 6 | 157 | 7.04e-53 | 179 |
MS.gene56527.t1 | AT1G26870 | 54.375 | 160 | 66 | 3 | 9 | 161 | 16 | 175 | 2.06e-52 | 176 |
MS.gene56527.t1 | AT3G61910 | 41.284 | 218 | 105 | 5 | 7 | 208 | 9 | 219 | 5.31e-52 | 173 |
MS.gene56527.t1 | AT5G66300 | 48.750 | 160 | 74 | 2 | 6 | 162 | 9 | 163 | 6.49e-52 | 171 |
MS.gene56527.t1 | AT3G12977 | 43.011 | 186 | 100 | 2 | 3 | 185 | 12 | 194 | 8.58e-52 | 171 |
MS.gene56527.t1 | AT1G54330 | 51.613 | 155 | 66 | 2 | 9 | 161 | 6 | 153 | 1.53e-51 | 171 |
MS.gene56527.t1 | AT5G62380 | 50.314 | 159 | 70 | 2 | 7 | 162 | 5 | 157 | 1.56e-51 | 172 |
MS.gene56527.t1 | AT5G62380 | 50.314 | 159 | 70 | 2 | 7 | 162 | 5 | 157 | 1.56e-51 | 172 |
MS.gene56527.t1 | AT1G56010 | 46.951 | 164 | 85 | 2 | 3 | 165 | 13 | 175 | 2.35e-51 | 171 |
MS.gene56527.t1 | AT3G10480 | 49.080 | 163 | 78 | 2 | 5 | 165 | 23 | 182 | 3.02e-51 | 174 |
MS.gene56527.t1 | AT1G32770 | 47.337 | 169 | 80 | 2 | 7 | 166 | 14 | 182 | 5.06e-51 | 171 |
MS.gene56527.t1 | AT5G46590 | 54.601 | 163 | 66 | 5 | 6 | 164 | 3 | 161 | 7.45e-51 | 169 |
MS.gene56527.t1 | AT3G10480 | 49.693 | 163 | 76 | 3 | 5 | 165 | 23 | 181 | 8.88e-51 | 172 |
MS.gene56527.t1 | AT2G02450 | 48.851 | 174 | 82 | 3 | 11 | 183 | 53 | 220 | 1.29e-50 | 171 |
MS.gene56527.t1 | AT2G02450 | 53.289 | 152 | 64 | 3 | 11 | 161 | 53 | 198 | 1.74e-50 | 171 |
MS.gene56527.t1 | AT3G10490 | 47.879 | 165 | 81 | 3 | 3 | 165 | 21 | 182 | 2.20e-50 | 166 |
MS.gene56527.t1 | AT5G46590 | 59.848 | 132 | 50 | 2 | 6 | 134 | 3 | 134 | 3.42e-49 | 164 |
MS.gene56527.t1 | AT4G17980 | 51.852 | 162 | 68 | 4 | 6 | 161 | 3 | 160 | 5.96e-49 | 163 |
MS.gene56527.t1 | AT4G17980 | 51.852 | 162 | 68 | 4 | 6 | 161 | 3 | 160 | 8.48e-49 | 163 |
MS.gene56527.t1 | AT2G17040 | 49.398 | 166 | 72 | 2 | 11 | 173 | 8 | 164 | 8.57e-49 | 163 |
MS.gene56527.t1 | AT3G10500 | 47.904 | 167 | 81 | 2 | 1 | 165 | 1 | 163 | 9.06e-49 | 169 |
MS.gene56527.t1 | AT3G10490 | 47.879 | 165 | 81 | 3 | 3 | 165 | 21 | 182 | 2.91e-48 | 166 |
MS.gene56527.t1 | AT5G04410 | 48.503 | 167 | 80 | 3 | 1 | 165 | 1 | 163 | 4.38e-48 | 168 |
MS.gene56527.t1 | AT4G28530 | 45.087 | 173 | 69 | 3 | 7 | 161 | 8 | 172 | 4.58e-48 | 163 |
MS.gene56527.t1 | AT4G35580 | 49.405 | 168 | 69 | 3 | 1 | 161 | 1 | 159 | 2.68e-47 | 165 |
MS.gene56527.t1 | AT4G35580 | 49.405 | 168 | 69 | 3 | 1 | 161 | 1 | 159 | 2.80e-47 | 165 |
MS.gene56527.t1 | AT4G35580 | 49.405 | 168 | 69 | 3 | 1 | 161 | 1 | 159 | 3.11e-47 | 164 |
MS.gene56527.t1 | AT1G34180 | 47.205 | 161 | 71 | 3 | 11 | 165 | 18 | 170 | 1.94e-46 | 161 |
MS.gene56527.t1 | AT1G33060 | 50.955 | 157 | 67 | 3 | 9 | 161 | 24 | 174 | 2.98e-46 | 164 |
MS.gene56527.t1 | AT1G33060 | 50.955 | 157 | 67 | 3 | 9 | 161 | 24 | 174 | 3.20e-46 | 164 |
MS.gene56527.t1 | AT1G32510 | 46.907 | 194 | 85 | 7 | 5 | 188 | 2 | 187 | 3.50e-46 | 156 |
MS.gene56527.t1 | AT3G10480 | 41.327 | 196 | 77 | 3 | 5 | 165 | 23 | 215 | 4.04e-46 | 162 |
MS.gene56527.t1 | AT3G44290 | 47.531 | 162 | 72 | 3 | 11 | 170 | 16 | 166 | 4.14e-46 | 154 |
MS.gene56527.t1 | AT5G24590 | 48.521 | 169 | 76 | 4 | 1 | 164 | 5 | 167 | 5.26e-46 | 160 |
MS.gene56527.t1 | AT2G27300 | 44.706 | 170 | 82 | 2 | 3 | 171 | 8 | 166 | 7.54e-46 | 157 |
MS.gene56527.t1 | AT1G34180 | 47.205 | 161 | 71 | 3 | 11 | 165 | 18 | 170 | 1.38e-45 | 161 |
MS.gene56527.t1 | AT3G44290 | 47.531 | 162 | 72 | 3 | 11 | 170 | 16 | 166 | 1.92e-45 | 156 |
MS.gene56527.t1 | AT1G34190 | 45.963 | 161 | 73 | 3 | 11 | 165 | 18 | 170 | 2.12e-45 | 160 |
MS.gene56527.t1 | AT5G22290 | 46.243 | 173 | 77 | 4 | 1 | 171 | 16 | 174 | 3.35e-45 | 155 |
MS.gene56527.t1 | AT1G34180 | 43.353 | 173 | 72 | 3 | 11 | 165 | 18 | 182 | 3.67e-44 | 155 |
MS.gene56527.t1 | AT1G34180 | 43.353 | 173 | 72 | 3 | 11 | 165 | 18 | 182 | 1.85e-43 | 155 |
MS.gene56527.t1 | AT3G12910 | 48.780 | 164 | 70 | 5 | 11 | 161 | 23 | 185 | 6.64e-43 | 148 |
MS.gene56527.t1 | AT5G64060 | 44.512 | 164 | 79 | 3 | 7 | 165 | 4 | 160 | 9.18e-43 | 149 |
MS.gene56527.t1 | AT3G49530 | 46.341 | 164 | 71 | 4 | 9 | 164 | 13 | 167 | 1.41e-42 | 150 |
MS.gene56527.t1 | AT3G49530 | 46.341 | 164 | 71 | 4 | 9 | 164 | 13 | 167 | 2.57e-42 | 150 |
MS.gene56527.t1 | AT5G09330 | 38.397 | 237 | 127 | 5 | 7 | 230 | 4 | 234 | 5.20e-42 | 150 |
MS.gene56527.t1 | AT5G09330 | 38.397 | 237 | 127 | 5 | 7 | 230 | 4 | 234 | 5.20e-42 | 150 |
MS.gene56527.t1 | AT5G09330 | 38.397 | 237 | 127 | 5 | 7 | 230 | 4 | 234 | 5.20e-42 | 150 |
MS.gene56527.t1 | AT5G09330 | 38.397 | 237 | 127 | 5 | 7 | 230 | 4 | 234 | 5.20e-42 | 150 |
MS.gene56527.t1 | AT5G09330 | 38.397 | 237 | 127 | 5 | 7 | 230 | 4 | 234 | 5.20e-42 | 150 |
MS.gene56527.t1 | AT1G32870 | 49.375 | 160 | 73 | 4 | 9 | 165 | 10 | 164 | 9.88e-42 | 150 |
MS.gene56527.t1 | AT1G32870 | 49.375 | 160 | 73 | 4 | 9 | 165 | 10 | 164 | 1.04e-41 | 150 |
MS.gene56527.t1 | AT1G32870 | 49.375 | 160 | 73 | 4 | 9 | 165 | 46 | 200 | 2.05e-41 | 150 |
MS.gene56527.t1 | AT5G61430 | 53.153 | 111 | 50 | 1 | 58 | 168 | 2 | 110 | 1.01e-37 | 134 |
MS.gene56527.t1 | AT4G10350 | 39.773 | 176 | 91 | 4 | 62 | 236 | 18 | 179 | 1.43e-35 | 129 |
MS.gene56527.t1 | AT5G04395 | 43.919 | 148 | 67 | 3 | 3 | 134 | 22 | 169 | 5.21e-35 | 124 |
MS.gene56527.t1 | AT1G56010 | 52.381 | 105 | 49 | 1 | 61 | 165 | 5 | 108 | 1.19e-34 | 125 |
MS.gene56527.t1 | AT2G33480 | 57.843 | 102 | 39 | 2 | 62 | 163 | 8 | 105 | 3.48e-34 | 123 |
MS.gene56527.t1 | AT3G12977 | 46.957 | 115 | 58 | 1 | 54 | 168 | 10 | 121 | 3.50e-34 | 124 |
MS.gene56527.t1 | AT5G64530 | 38.788 | 165 | 77 | 4 | 9 | 161 | 3 | 155 | 4.11e-32 | 117 |
MS.gene56527.t1 | AT5G64530 | 44.531 | 128 | 57 | 3 | 9 | 134 | 3 | 118 | 8.30e-32 | 115 |
MS.gene56527.t1 | AT4G28530 | 36.257 | 171 | 50 | 3 | 7 | 161 | 8 | 135 | 4.69e-31 | 117 |
MS.gene56527.t1 | AT5G22380 | 39.752 | 161 | 88 | 5 | 6 | 159 | 2 | 160 | 8.75e-31 | 115 |
MS.gene56527.t1 | AT3G44350 | 37.059 | 170 | 98 | 5 | 8 | 171 | 4 | 170 | 3.43e-30 | 114 |
MS.gene56527.t1 | AT4G01550 | 41.975 | 162 | 75 | 6 | 12 | 165 | 7 | 157 | 4.24e-29 | 115 |
MS.gene56527.t1 | AT3G04420 | 44.961 | 129 | 67 | 2 | 8 | 132 | 2 | 130 | 1.41e-28 | 110 |
MS.gene56527.t1 | AT3G44350 | 41.791 | 134 | 72 | 3 | 8 | 135 | 4 | 137 | 1.62e-28 | 107 |
MS.gene56527.t1 | AT3G04420 | 44.961 | 129 | 67 | 2 | 8 | 132 | 2 | 130 | 2.61e-28 | 111 |
MS.gene56527.t1 | AT2G43000 | 42.553 | 141 | 62 | 3 | 71 | 211 | 2 | 123 | 4.93e-27 | 104 |
MS.gene56527.t1 | AT1G02230 | 46.154 | 130 | 60 | 6 | 10 | 132 | 4 | 130 | 1.94e-25 | 103 |
MS.gene56527.t1 | AT4G01520 | 41.667 | 132 | 70 | 4 | 10 | 134 | 5 | 136 | 9.19e-25 | 100 |
MS.gene56527.t1 | AT1G02220 | 42.636 | 129 | 67 | 3 | 8 | 132 | 2 | 127 | 2.60e-24 | 100 |
MS.gene56527.t1 | AT4G01540 | 42.308 | 130 | 68 | 4 | 12 | 134 | 7 | 136 | 6.51e-24 | 99.8 |
MS.gene56527.t1 | AT4G01540 | 42.308 | 130 | 68 | 4 | 12 | 134 | 7 | 136 | 6.64e-24 | 100 |
MS.gene56527.t1 | AT4G01540 | 42.308 | 130 | 68 | 4 | 12 | 134 | 7 | 136 | 7.38e-24 | 100 |
MS.gene56527.t1 | AT4G01540 | 42.308 | 130 | 68 | 4 | 12 | 134 | 7 | 136 | 8.70e-24 | 100 |
MS.gene56527.t1 | AT1G02250 | 43.846 | 130 | 63 | 5 | 10 | 132 | 4 | 130 | 1.42e-22 | 95.9 |
MS.gene56527.t1 | AT5G14000 | 37.405 | 131 | 78 | 2 | 8 | 136 | 14 | 142 | 1.48e-22 | 91.3 |
MS.gene56527.t1 | AT3G56530 | 34.375 | 160 | 96 | 3 | 3 | 159 | 46 | 199 | 1.64e-22 | 95.1 |
MS.gene56527.t1 | AT5G14000 | 32.934 | 167 | 99 | 4 | 8 | 171 | 14 | 170 | 1.70e-22 | 92.4 |
MS.gene56527.t1 | AT2G18060 | 44.118 | 102 | 49 | 3 | 86 | 187 | 1 | 94 | 8.63e-22 | 92.4 |
MS.gene56527.t1 | AT1G01010 | 37.654 | 162 | 72 | 7 | 12 | 158 | 6 | 153 | 1.50e-21 | 93.6 |
MS.gene56527.t1 | AT3G10490 | 48.810 | 84 | 40 | 2 | 82 | 165 | 2 | 82 | 1.80e-21 | 92.4 |
MS.gene56527.t1 | AT3G10490 | 48.810 | 84 | 40 | 2 | 82 | 165 | 2 | 82 | 1.80e-21 | 92.4 |
MS.gene56527.t1 | AT5G50820 | 35.766 | 137 | 76 | 4 | 6 | 138 | 14 | 142 | 9.11e-21 | 87.8 |
MS.gene56527.t1 | AT3G55210 | 32.749 | 171 | 93 | 4 | 3 | 159 | 5 | 167 | 5.94e-18 | 81.6 |
MS.gene56527.t1 | AT5G22290 | 47.059 | 85 | 33 | 2 | 88 | 171 | 2 | 75 | 1.48e-17 | 80.1 |
MS.gene56527.t1 | AT3G04430 | 35.878 | 131 | 70 | 5 | 15 | 132 | 6 | 135 | 2.90e-12 | 64.7 |
MS.gene56527.t1 | AT1G28470 | 31.081 | 148 | 85 | 5 | 9 | 140 | 77 | 223 | 6.27e-12 | 65.1 |
MS.gene56527.t1 | AT5G18300 | 34.286 | 140 | 72 | 7 | 13 | 145 | 18 | 144 | 8.30e-12 | 62.0 |
MS.gene56527.t1 | AT5G56620 | 32.258 | 155 | 73 | 7 | 9 | 134 | 43 | 194 | 2.27e-11 | 63.9 |
MS.gene56527.t1 | AT5G56620 | 32.258 | 155 | 73 | 7 | 9 | 134 | 43 | 194 | 2.35e-11 | 63.9 |
MS.gene56527.t1 | AT5G56620 | 32.258 | 155 | 73 | 7 | 9 | 134 | 43 | 194 | 2.39e-11 | 63.9 |
MS.gene56527.t1 | AT4G29230 | 32.667 | 150 | 76 | 6 | 9 | 134 | 48 | 196 | 4.60e-11 | 63.2 |
MS.gene56527.t1 | AT4G29230 | 32.667 | 150 | 76 | 6 | 9 | 134 | 47 | 195 | 4.64e-11 | 63.2 |
MS.gene56527.t1 | AT4G29230 | 32.667 | 150 | 76 | 6 | 9 | 134 | 48 | 196 | 4.72e-11 | 63.2 |
Find 65 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCATTTGTTTCACAAATAT+TGG | 0.195650 | 4.4:-30465689 | None:intergenic |
CAAATCAACAATTCCAATAT+TGG | 0.200100 | 4.4:+30465584 | MS.gene56527:CDS |
AAAAGTGGATCAAAGCAAAT+TGG | 0.239330 | 4.4:+30464971 | MS.gene56527:CDS |
TTTGGGTACTTTCTTTCTCT+TGG | 0.269227 | 4.4:-30464881 | None:intergenic |
GAGCAACTTTGTCTGGATAT+TGG | 0.273149 | 4.4:+30464921 | MS.gene56527:CDS |
TTGTTCACTTACTTATCTTT+TGG | 0.277479 | 4.4:+30465511 | MS.gene56527:CDS |
ATAGGGGTCAATTCCAATAT+TGG | 0.285565 | 4.4:-30465597 | None:intergenic |
AATTTATAGATATCAACTTC+TGG | 0.300371 | 4.4:-30464495 | None:intergenic |
AATGCAGATAAATCTGAGTT+TGG | 0.318833 | 4.4:+30464833 | MS.gene56527:intron |
CCAGACAAAGTTGCTCTATT+AGG | 0.328673 | 4.4:-30464914 | None:intergenic |
CTATTAGGCCTAACCCCATT+TGG | 0.336706 | 4.4:-30464899 | None:intergenic |
TTGGGTACTTTCTTTCTCTT+GGG | 0.351827 | 4.4:-30464880 | None:intergenic |
ATGCAGATAAATCTGAGTTT+GGG | 0.362021 | 4.4:+30464834 | MS.gene56527:intron |
CTTATCTGATGGTTCAACTT+TGG | 0.369466 | 4.4:+30465556 | MS.gene56527:CDS |
ATGCATGAGTACAGATTGAT+TGG | 0.383604 | 4.4:+30465058 | MS.gene56527:CDS |
AAAGTGGATCAAAGCAAATT+GGG | 0.388567 | 4.4:+30464972 | MS.gene56527:CDS |
AATTGGGGTGAAGAAATCTT+TGG | 0.390973 | 4.4:+30464988 | MS.gene56527:CDS |
TAATGGTTGGTCATTTCAAT+TGG | 0.392349 | 4.4:-30465632 | None:intergenic |
TATTAGGCCTAACCCCATTT+GGG | 0.396297 | 4.4:-30464898 | None:intergenic |
CCTAATAGAGCAACTTTGTC+TGG | 0.401002 | 4.4:+30464914 | MS.gene56527:CDS |
AAACAAACTAGCAAGCATAT+TGG | 0.402864 | 4.4:+30465088 | MS.gene56527:CDS |
ATTTATAGATATCAACTTCT+GGG | 0.409565 | 4.4:-30464494 | None:intergenic |
TTTCACAAATATTGGCTGAT+TGG | 0.426611 | 4.4:-30465681 | None:intergenic |
GAGAAAGAAAGTACCCAAAT+GGG | 0.441206 | 4.4:+30464885 | MS.gene56527:CDS |
AGAGAAAGAAAGTACCCAAA+TGG | 0.452421 | 4.4:+30464884 | MS.gene56527:CDS |
GTTGAACCATCAGATAAGAT+TGG | 0.454575 | 4.4:-30465551 | None:intergenic |
CAAAGGGTGTCAAAACTGAT+TGG | 0.459054 | 4.4:+30465032 | MS.gene56527:CDS |
CTGAGTTTGGGGAGAATGAA+TGG | 0.459662 | 4.4:+30464846 | MS.gene56527:CDS |
GGGATAATTGATGCAGGGCA+TGG | 0.481397 | 4.4:-30464474 | None:intergenic |
TTTGGTCCAATCTTATCTGA+TGG | 0.485374 | 4.4:+30465545 | MS.gene56527:CDS |
TAAGTGAACAACTCCTTGTA+AGG | 0.485477 | 4.4:-30465499 | None:intergenic |
ATATCTATAAATTTGATCCA+TGG | 0.491707 | 4.4:+30464505 | MS.gene56527:CDS |
TCTGGATATTGGAAAGCTAC+TGG | 0.494091 | 4.4:+30464932 | MS.gene56527:CDS |
TTGGTCATTTCAATTGGCTG+AGG | 0.507393 | 4.4:-30465626 | None:intergenic |
ACAAGCTCTGAACTCCCTCC+TGG | 0.507490 | 4.4:+30464384 | MS.gene56527:CDS |
TATCTATAAATTTGATCCAT+GGG | 0.513541 | 4.4:+30464506 | MS.gene56527:CDS |
TTTGATCCATGGGAATTGCC+TGG | 0.520646 | 4.4:+30464516 | MS.gene56527:CDS |
TCTATAATAACTAATAATGA+TGG | 0.526503 | 4.4:+30465458 | MS.gene56527:CDS |
ACTTCTGGGATAATTGATGC+AGG | 0.531050 | 4.4:-30464480 | None:intergenic |
TATGTGAATCTGCTTCATAA+TGG | 0.537169 | 4.4:-30465649 | None:intergenic |
TTACAAGGGCAGGCCACCAA+AGG | 0.537258 | 4.4:+30465015 | MS.gene56527:CDS |
GTTGGATGAAATCTAAAGCC+AGG | 0.547592 | 4.4:-30464402 | None:intergenic |
AAGAAATGATGAACCTTACA+AGG | 0.553442 | 4.4:+30465486 | MS.gene56527:CDS |
TACAAGGGCAGGCCACCAAA+GGG | 0.555341 | 4.4:+30465016 | MS.gene56527:CDS |
GAAAGTACCCAAATGGGGTT+AGG | 0.557007 | 4.4:+30464891 | MS.gene56527:CDS |
ACAATTAGTTCCTCATCAGT+TGG | 0.571272 | 4.4:-30464420 | None:intergenic |
TAGATTTCATCCAACTGATG+AGG | 0.573387 | 4.4:+30464410 | MS.gene56527:CDS |
ATTAAAGGGATTTACCCTCA+TGG | 0.588173 | 4.4:-30465113 | None:intergenic |
GTGTCATCAGCTAGATGACT+GGG | 0.591677 | 4.4:+30465349 | MS.gene56527:intron |
ACAGACAAGGCAATCAAAAG+TGG | 0.595775 | 4.4:+30464956 | MS.gene56527:CDS |
TATATACCAGGCAATTCCCA+TGG | 0.600939 | 4.4:-30464522 | None:intergenic |
TGTGTCATCAGCTAGATGAC+TGG | 0.610296 | 4.4:+30465348 | MS.gene56527:intron |
GAAAGCTACTGGCACAGACA+AGG | 0.610943 | 4.4:+30464943 | MS.gene56527:CDS |
ATCTATAAGAAGAAGCACAT+GGG | 0.628002 | 4.4:+30465383 | MS.gene56527:CDS |
TGCAGATAAATCTGAGTTTG+GGG | 0.637040 | 4.4:+30464835 | MS.gene56527:intron |
CTTCTGGGATAATTGATGCA+GGG | 0.642360 | 4.4:-30464479 | None:intergenic |
CAAGCATATTGGATCCATGA+GGG | 0.642547 | 4.4:+30465099 | MS.gene56527:CDS |
TGAATCTGCTTCATAATGGT+TGG | 0.643722 | 4.4:-30465645 | None:intergenic |
TTGATGTAGCTTGATTACAA+AGG | 0.644208 | 4.4:-30464449 | None:intergenic |
GATGAAATCTAAAGCCAGGA+GGG | 0.652933 | 4.4:-30464398 | None:intergenic |
AAGTGGATCAAAGCAAATTG+GGG | 0.655184 | 4.4:+30464973 | MS.gene56527:CDS |
GATCTATAAGAAGAAGCACA+TGG | 0.656336 | 4.4:+30465382 | MS.gene56527:CDS |
AGAAAGAAAGTACCCAAATG+GGG | 0.672302 | 4.4:+30464886 | MS.gene56527:CDS |
GCAAGCATATTGGATCCATG+AGG | 0.703211 | 4.4:+30465098 | MS.gene56527:CDS |
GGATGAAATCTAAAGCCAGG+AGG | 0.707038 | 4.4:-30464399 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCTATAATAACTAATAATGA+TGG | + | chr4.4:30465458-30465477 | MS.gene56527:CDS | 15.0% |
!! | AATAAAAATTCACTATGACA+TGG | - | chr4.4:30465225-30465244 | None:intergenic | 20.0% |
!! | AATTTATAGATATCAACTTC+TGG | - | chr4.4:30464498-30464517 | None:intergenic | 20.0% |
!! | ACAAACAAATATAGCAAAAT+AGG | - | chr4.4:30465145-30465164 | None:intergenic | 20.0% |
!! | ATATCTATAAATTTGATCCA+TGG | + | chr4.4:30464505-30464524 | MS.gene56527:CDS | 20.0% |
!! | ATTTATAGATATCAACTTCT+GGG | - | chr4.4:30464497-30464516 | None:intergenic | 20.0% |
!! | ATTTATCTGCATTCTATAAT+TGG | - | chr4.4:30464826-30464845 | None:intergenic | 20.0% |
!! | TAACACATTCAATAAAATTC+AGG | - | chr4.4:30465297-30465316 | None:intergenic | 20.0% |
!! | TATCTATAAATTTGATCCAT+GGG | + | chr4.4:30464506-30464525 | MS.gene56527:CDS | 20.0% |
!! | TTACAAAGTATATATATACC+AGG | - | chr4.4:30464537-30464556 | None:intergenic | 20.0% |
! | AAAATAGGCCAATGATTAAA+GGG | - | chr4.4:30465130-30465149 | None:intergenic | 25.0% |
! | CAAATCAACAATTCCAATAT+TGG | + | chr4.4:30465584-30465603 | MS.gene56527:CDS | 25.0% |
! | TAGTACCTAATAAAAAACGA+AGG | - | chr4.4:30464802-30464821 | None:intergenic | 25.0% |
! | TGCATTTGTTTCACAAATAT+TGG | - | chr4.4:30465692-30465711 | None:intergenic | 25.0% |
! | TTGGTACTAATTTGAGAAAA+TGG | + | chr4.4:30464691-30464710 | MS.gene56527:intron | 25.0% |
!! | CTTTTGGATATGAATTACTT+TGG | + | chr4.4:30465527-30465546 | MS.gene56527:CDS | 25.0% |
!! | TTGTTCACTTACTTATCTTT+TGG | + | chr4.4:30465511-30465530 | MS.gene56527:CDS | 25.0% |
!!! | AAATCTTTGGTCTTTTACAA+GGG | + | chr4.4:30465001-30465020 | MS.gene56527:CDS | 25.0% |
AAAAACATTGCAGCAAAAAG+AGG | + | chr4.4:30465406-30465425 | MS.gene56527:CDS | 30.0% | |
AAAAGTGGATCAAAGCAAAT+TGG | + | chr4.4:30464971-30464990 | MS.gene56527:CDS | 30.0% | |
AAACAAACTAGCAAGCATAT+TGG | + | chr4.4:30465088-30465107 | MS.gene56527:CDS | 30.0% | |
AAAGTGGATCAAAGCAAATT+GGG | + | chr4.4:30464972-30464991 | MS.gene56527:CDS | 30.0% | |
AAGAAATGATGAACCTTACA+AGG | + | chr4.4:30465486-30465505 | MS.gene56527:CDS | 30.0% | |
AATGCAGATAAATCTGAGTT+TGG | + | chr4.4:30464833-30464852 | MS.gene56527:intron | 30.0% | |
ATGCAGATAAATCTGAGTTT+GGG | + | chr4.4:30464834-30464853 | MS.gene56527:intron | 30.0% | |
CAAAATAGGCCAATGATTAA+AGG | - | chr4.4:30465131-30465150 | None:intergenic | 30.0% | |
CTCAAATTAGTACCAATGTT+TGG | - | chr4.4:30464687-30464706 | None:intergenic | 30.0% | |
TATGTGAATCTGCTTCATAA+TGG | - | chr4.4:30465652-30465671 | None:intergenic | 30.0% | |
TTGATGTAGCTTGATTACAA+AGG | - | chr4.4:30464452-30464471 | None:intergenic | 30.0% | |
! | ACTATGACATGGAAACTTTT+TGG | - | chr4.4:30465214-30465233 | None:intergenic | 30.0% |
! | ATCTATAAGAAGAAGCACAT+GGG | + | chr4.4:30465383-30465402 | MS.gene56527:CDS | 30.0% |
! | TAATGGTTGGTCATTTCAAT+TGG | - | chr4.4:30465635-30465654 | None:intergenic | 30.0% |
! | TTTCACAAATATTGGCTGAT+TGG | - | chr4.4:30465684-30465703 | None:intergenic | 30.0% |
!! | GAAATCTTTGGTCTTTTACA+AGG | + | chr4.4:30465000-30465019 | MS.gene56527:CDS | 30.0% |
!!! | TGTCTCCTTCGTTTTTTATT+AGG | + | chr4.4:30464794-30464813 | MS.gene56527:intron | 30.0% |
AAGTGGATCAAAGCAAATTG+GGG | + | chr4.4:30464973-30464992 | MS.gene56527:CDS | 35.0% | |
AATTGGGGTGAAGAAATCTT+TGG | + | chr4.4:30464988-30465007 | MS.gene56527:CDS | 35.0% | |
ACAATTAGTTCCTCATCAGT+TGG | - | chr4.4:30464423-30464442 | None:intergenic | 35.0% | |
ATAGGGGTCAATTCCAATAT+TGG | - | chr4.4:30465600-30465619 | None:intergenic | 35.0% | |
ATGACGCTAAAACCAAACAT+TGG | + | chr4.4:30464672-30464691 | MS.gene56527:intron | 35.0% | |
ATGCATGAGTACAGATTGAT+TGG | + | chr4.4:30465058-30465077 | MS.gene56527:CDS | 35.0% | |
ATTAAAGGGATTTACCCTCA+TGG | - | chr4.4:30465116-30465135 | None:intergenic | 35.0% | |
CTTATCTGATGGTTCAACTT+TGG | + | chr4.4:30465556-30465575 | MS.gene56527:CDS | 35.0% | |
GGGTAAATCCCTTTAATCAT+TGG | + | chr4.4:30465119-30465138 | MS.gene56527:intron | 35.0% | |
GTTGAACCATCAGATAAGAT+TGG | - | chr4.4:30465554-30465573 | None:intergenic | 35.0% | |
TAAGTGAACAACTCCTTGTA+AGG | - | chr4.4:30465502-30465521 | None:intergenic | 35.0% | |
TAGATTTCATCCAACTGATG+AGG | + | chr4.4:30464410-30464429 | MS.gene56527:CDS | 35.0% | |
TATGATTGACCTTTCCTTTG+TGG | + | chr4.4:30465320-30465339 | MS.gene56527:intron | 35.0% | |
TCTCATGTTTGTGTCTATGT+TGG | - | chr4.4:30464651-30464670 | None:intergenic | 35.0% | |
TGAATCTGCTTCATAATGGT+TGG | - | chr4.4:30465648-30465667 | None:intergenic | 35.0% | |
TGCAGATAAATCTGAGTTTG+GGG | + | chr4.4:30464835-30464854 | MS.gene56527:intron | 35.0% | |
TTGGGTACTTTCTTTCTCTT+GGG | - | chr4.4:30464883-30464902 | None:intergenic | 35.0% | |
TTTGGGTACTTTCTTTCTCT+TGG | - | chr4.4:30464884-30464903 | None:intergenic | 35.0% | |
TTTGGTCCAATCTTATCTGA+TGG | + | chr4.4:30465545-30465564 | MS.gene56527:CDS | 35.0% | |
! | AATTGGCTGAGGTTTTACAT+AGG | - | chr4.4:30465618-30465637 | None:intergenic | 35.0% |
! | ATTGGCTGAGGTTTTACATA+GGG | - | chr4.4:30465617-30465636 | None:intergenic | 35.0% |
! | GATCTATAAGAAGAAGCACA+TGG | + | chr4.4:30465382-30465401 | MS.gene56527:CDS | 35.0% |
! | GCAAAACTGTTTTACACTGA+CGG | + | chr4.4:30465255-30465274 | MS.gene56527:intron | 35.0% |
! | TTTAAGTTAGTGACGTGTAC+TGG | + | chr4.4:30464733-30464752 | MS.gene56527:intron | 35.0% |
!! | AGAAAGAAAGTACCCAAATG+GGG | + | chr4.4:30464886-30464905 | MS.gene56527:CDS | 35.0% |
!! | AGAGAAAGAAAGTACCCAAA+TGG | + | chr4.4:30464884-30464903 | MS.gene56527:CDS | 35.0% |
!! | GAGAAAGAAAGTACCCAAAT+GGG | + | chr4.4:30464885-30464904 | MS.gene56527:CDS | 35.0% |
ACAGACAAGGCAATCAAAAG+TGG | + | chr4.4:30464956-30464975 | MS.gene56527:CDS | 40.0% | |
CAAGCATATTGGATCCATGA+GGG | + | chr4.4:30465099-30465118 | MS.gene56527:CDS | 40.0% | |
CACATACAACCACAAAGGAA+AGG | - | chr4.4:30465332-30465351 | None:intergenic | 40.0% | |
CCAGACAAAGTTGCTCTATT+AGG | - | chr4.4:30464917-30464936 | None:intergenic | 40.0% | |
CCTAATAGAGCAACTTTGTC+TGG | + | chr4.4:30464914-30464933 | MS.gene56527:CDS | 40.0% | |
GAGCAACTTTGTCTGGATAT+TGG | + | chr4.4:30464921-30464940 | MS.gene56527:CDS | 40.0% | |
GATGACACATACAACCACAA+AGG | - | chr4.4:30465337-30465356 | None:intergenic | 40.0% | |
TATATACCAGGCAATTCCCA+TGG | - | chr4.4:30464525-30464544 | None:intergenic | 40.0% | |
TATTAGGCCTAACCCCATTT+GGG | - | chr4.4:30464901-30464920 | None:intergenic | 40.0% | |
TCTGGATATTGGAAAGCTAC+TGG | + | chr4.4:30464932-30464951 | MS.gene56527:CDS | 40.0% | |
TTGGTCATTTCAATTGGCTG+AGG | - | chr4.4:30465629-30465648 | None:intergenic | 40.0% | |
! | ACGTCTTCAATCTGAAGTGT+CGG | + | chr4.4:30464758-30464777 | MS.gene56527:intron | 40.0% |
! | GATGAAATCTAAAGCCAGGA+GGG | - | chr4.4:30464401-30464420 | None:intergenic | 40.0% |
! | GTTGGATGAAATCTAAAGCC+AGG | - | chr4.4:30464405-30464424 | None:intergenic | 40.0% |
! | TTGGCTGAGGTTTTACATAG+GGG | - | chr4.4:30465616-30465635 | None:intergenic | 40.0% |
!! | ACTTCTGGGATAATTGATGC+AGG | - | chr4.4:30464483-30464502 | None:intergenic | 40.0% |
!! | CAAAGGGTGTCAAAACTGAT+TGG | + | chr4.4:30465032-30465051 | MS.gene56527:CDS | 40.0% |
!! | CAATCAGTTTTGACACCCTT+TGG | - | chr4.4:30465034-30465053 | None:intergenic | 40.0% |
!! | CTTCTGGGATAATTGATGCA+GGG | - | chr4.4:30464482-30464501 | None:intergenic | 40.0% |
!! | TAGATGACTGGGTTTTATGC+AGG | + | chr4.4:30465360-30465379 | MS.gene56527:CDS | 40.0% |
CTATTAGGCCTAACCCCATT+TGG | - | chr4.4:30464902-30464921 | None:intergenic | 45.0% | |
CTGAGTTTGGGGAGAATGAA+TGG | + | chr4.4:30464846-30464865 | MS.gene56527:CDS | 45.0% | |
GCAAGCATATTGGATCCATG+AGG | + | chr4.4:30465098-30465117 | MS.gene56527:CDS | 45.0% | |
GTGTCATCAGCTAGATGACT+GGG | + | chr4.4:30465349-30465368 | MS.gene56527:intron | 45.0% | |
TGTGTCATCAGCTAGATGAC+TGG | + | chr4.4:30465348-30465367 | MS.gene56527:intron | 45.0% | |
TTTGATCCATGGGAATTGCC+TGG | + | chr4.4:30464516-30464535 | MS.gene56527:CDS | 45.0% | |
! | GGATGAAATCTAAAGCCAGG+AGG | - | chr4.4:30464402-30464421 | None:intergenic | 45.0% |
!! | CTTTGGTCTTTTACAAGGGC+AGG | + | chr4.4:30465005-30465024 | MS.gene56527:CDS | 45.0% |
!! | GAAAGTACCCAAATGGGGTT+AGG | + | chr4.4:30464891-30464910 | MS.gene56527:CDS | 45.0% |
!! | TCAGTTTTGACACCCTTTGG+TGG | - | chr4.4:30465031-30465050 | None:intergenic | 45.0% |
GAAAGCTACTGGCACAGACA+AGG | + | chr4.4:30464943-30464962 | MS.gene56527:CDS | 50.0% | |
GGGATAATTGATGCAGGGCA+TGG | - | chr4.4:30464477-30464496 | None:intergenic | 50.0% | |
TACAAGGGCAGGCCACCAAA+GGG | + | chr4.4:30465016-30465035 | MS.gene56527:CDS | 55.0% | |
TTACAAGGGCAGGCCACCAA+AGG | + | chr4.4:30465015-30465034 | MS.gene56527:CDS | 55.0% | |
!! | ACAAGCTCTGAACTCCCTCC+TGG | + | chr4.4:30464384-30464403 | MS.gene56527:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 30464372 | 30465727 | 30464372 | ID=MS.gene56527 |
chr4.4 | mRNA | 30464372 | 30465727 | 30464372 | ID=MS.gene56527.t1;Parent=MS.gene56527 |
chr4.4 | exon | 30464372 | 30464537 | 30464372 | ID=MS.gene56527.t1.exon1;Parent=MS.gene56527.t1 |
chr4.4 | CDS | 30464372 | 30464537 | 30464372 | ID=cds.MS.gene56527.t1;Parent=MS.gene56527.t1 |
chr4.4 | exon | 30464840 | 30465120 | 30464840 | ID=MS.gene56527.t1.exon2;Parent=MS.gene56527.t1 |
chr4.4 | CDS | 30464840 | 30465120 | 30464840 | ID=cds.MS.gene56527.t1;Parent=MS.gene56527.t1 |
chr4.4 | exon | 30465359 | 30465727 | 30465359 | ID=MS.gene56527.t1.exon3;Parent=MS.gene56527.t1 |
chr4.4 | CDS | 30465359 | 30465727 | 30465359 | ID=cds.MS.gene56527.t1;Parent=MS.gene56527.t1 |
Gene Sequence |
Protein sequence |