Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56569.t1 | XP_003607861.1 | 97.7 | 174 | 4 | 0 | 1 | 174 | 1 | 174 | 9.20E-91 | 342.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56569.t1 | Q9SHE9 | 74.4 | 176 | 37 | 3 | 1 | 174 | 1 | 170 | 2.8e-64 | 246.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56569.t1 | G7JIR8 | 97.7 | 174 | 4 | 0 | 1 | 174 | 1 | 174 | 6.7e-91 | 342.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene56569.t1 | TF | LOB |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56569.t1 | MTR_4g083680 | 97.701 | 174 | 4 | 0 | 1 | 174 | 1 | 174 | 3.51e-128 | 357 |
MS.gene56569.t1 | MTR_2g068760 | 81.600 | 125 | 21 | 1 | 1 | 125 | 1 | 123 | 1.64e-72 | 216 |
MS.gene56569.t1 | MTR_5g083230 | 73.874 | 111 | 29 | 0 | 11 | 121 | 2 | 112 | 1.56e-57 | 178 |
MS.gene56569.t1 | MTR_3g031660 | 65.000 | 120 | 42 | 0 | 11 | 130 | 3 | 122 | 4.66e-57 | 177 |
MS.gene56569.t1 | MTR_3g071590 | 61.224 | 147 | 48 | 3 | 5 | 146 | 2 | 144 | 5.25e-57 | 176 |
MS.gene56569.t1 | MTR_2g093310 | 63.158 | 114 | 42 | 0 | 10 | 123 | 28 | 141 | 3.99e-52 | 165 |
MS.gene56569.t1 | MTR_4g060950 | 66.667 | 111 | 36 | 1 | 14 | 123 | 23 | 133 | 1.69e-50 | 160 |
MS.gene56569.t1 | MTR_6g005070 | 55.797 | 138 | 57 | 2 | 14 | 151 | 8 | 141 | 1.69e-49 | 157 |
MS.gene56569.t1 | MTR_1g095850 | 67.290 | 107 | 35 | 0 | 16 | 122 | 73 | 179 | 1.16e-48 | 157 |
MS.gene56569.t1 | MTR_3g094690 | 62.162 | 111 | 42 | 0 | 14 | 124 | 46 | 156 | 1.41e-47 | 155 |
MS.gene56569.t1 | MTR_5g083960 | 62.727 | 110 | 41 | 0 | 5 | 114 | 29 | 138 | 1.92e-47 | 153 |
MS.gene56569.t1 | MTR_3g077240 | 65.714 | 105 | 36 | 0 | 14 | 118 | 9 | 113 | 3.18e-47 | 152 |
MS.gene56569.t1 | MTR_4g105170 | 65.385 | 104 | 36 | 0 | 14 | 117 | 10 | 113 | 4.81e-47 | 152 |
MS.gene56569.t1 | MTR_6g005080 | 61.905 | 105 | 40 | 0 | 14 | 118 | 9 | 113 | 5.34e-47 | 150 |
MS.gene56569.t1 | MTR_7g033800 | 64.078 | 103 | 37 | 0 | 14 | 116 | 10 | 112 | 6.51e-47 | 151 |
MS.gene56569.t1 | MTR_3g094690 | 62.162 | 111 | 41 | 1 | 14 | 124 | 46 | 155 | 2.05e-45 | 149 |
MS.gene56569.t1 | MTR_5g075020 | 61.290 | 124 | 47 | 1 | 14 | 137 | 42 | 164 | 3.98e-43 | 143 |
MS.gene56569.t1 | MTR_5g075020 | 61.290 | 124 | 47 | 1 | 14 | 137 | 46 | 168 | 4.16e-43 | 143 |
MS.gene56569.t1 | MTR_3g071420 | 62.376 | 101 | 38 | 0 | 12 | 112 | 11 | 111 | 3.75e-42 | 139 |
MS.gene56569.t1 | MTR_3g073690 | 60.784 | 102 | 40 | 0 | 13 | 114 | 7 | 108 | 3.91e-42 | 140 |
MS.gene56569.t1 | MTR_5g017950 | 63.366 | 101 | 37 | 0 | 14 | 114 | 7 | 107 | 1.32e-41 | 142 |
MS.gene56569.t1 | MTR_5g083010 | 60.396 | 101 | 40 | 0 | 12 | 112 | 8 | 108 | 2.39e-41 | 137 |
MS.gene56569.t1 | MTR_7g096530 | 56.481 | 108 | 46 | 1 | 11 | 117 | 10 | 117 | 1.80e-40 | 136 |
MS.gene56569.t1 | MTR_8g040900 | 65.347 | 101 | 35 | 0 | 14 | 114 | 6 | 106 | 2.31e-40 | 136 |
MS.gene56569.t1 | MTR_3g452660 | 60.396 | 101 | 40 | 0 | 14 | 114 | 6 | 106 | 6.62e-40 | 137 |
MS.gene56569.t1 | MTR_1g070220 | 52.137 | 117 | 55 | 1 | 1 | 116 | 1 | 117 | 7.06e-39 | 132 |
MS.gene56569.t1 | MTR_8g036105 | 54.867 | 113 | 48 | 2 | 2 | 113 | 7 | 117 | 8.00e-37 | 127 |
MS.gene56569.t1 | MTR_7g028905 | 51.402 | 107 | 52 | 0 | 14 | 120 | 4 | 110 | 1.66e-36 | 123 |
MS.gene56569.t1 | MTR_8g036085 | 56.566 | 99 | 42 | 1 | 15 | 112 | 23 | 121 | 1.43e-35 | 124 |
MS.gene56569.t1 | MTR_5g093010 | 53.535 | 99 | 46 | 0 | 16 | 114 | 6 | 104 | 1.45e-35 | 121 |
MS.gene56569.t1 | MTR_7g074990 | 55.446 | 101 | 44 | 1 | 15 | 114 | 20 | 120 | 8.77e-35 | 122 |
MS.gene56569.t1 | MTR_6g027710 | 49.074 | 108 | 54 | 1 | 14 | 120 | 39 | 146 | 2.33e-34 | 120 |
MS.gene56569.t1 | MTR_7g096610 | 52.830 | 106 | 49 | 1 | 11 | 115 | 4 | 109 | 2.35e-33 | 118 |
MS.gene56569.t1 | MTR_1g070205 | 52.941 | 102 | 47 | 1 | 15 | 115 | 12 | 113 | 1.34e-32 | 116 |
MS.gene56569.t1 | MTR_7g075230 | 52.632 | 114 | 43 | 3 | 3 | 113 | 8 | 113 | 1.68e-31 | 112 |
MS.gene56569.t1 | MTR_5g080470 | 50.495 | 101 | 49 | 1 | 11 | 110 | 3 | 103 | 1.83e-31 | 112 |
MS.gene56569.t1 | MTR_8g079660 | 40.152 | 132 | 74 | 2 | 15 | 141 | 8 | 139 | 6.83e-29 | 107 |
MS.gene56569.t1 | MTR_4g107450 | 48.000 | 100 | 52 | 0 | 9 | 108 | 4 | 103 | 2.24e-28 | 107 |
MS.gene56569.t1 | MTR_8g079620 | 43.750 | 128 | 68 | 3 | 15 | 138 | 8 | 135 | 3.29e-28 | 105 |
MS.gene56569.t1 | MTR_6g027700 | 44.554 | 101 | 55 | 1 | 15 | 114 | 7 | 107 | 8.04e-28 | 103 |
MS.gene56569.t1 | MTR_6g011230 | 35.507 | 138 | 86 | 2 | 16 | 153 | 12 | 146 | 6.38e-27 | 101 |
MS.gene56569.t1 | MTR_6g011250 | 35.507 | 138 | 78 | 2 | 16 | 152 | 10 | 137 | 1.43e-26 | 99.8 |
MS.gene56569.t1 | MTR_2g100020 | 38.462 | 104 | 64 | 0 | 11 | 114 | 15 | 118 | 4.49e-25 | 98.2 |
MS.gene56569.t1 | MTR_8g017090 | 40.385 | 104 | 62 | 0 | 16 | 119 | 13 | 116 | 6.20e-25 | 98.2 |
MS.gene56569.t1 | MTR_6g011200 | 47.500 | 80 | 41 | 1 | 16 | 94 | 10 | 89 | 1.48e-24 | 96.3 |
MS.gene56569.t1 | MTR_8g079580 | 46.602 | 103 | 54 | 1 | 15 | 116 | 8 | 110 | 1.56e-24 | 95.5 |
MS.gene56569.t1 | MTR_4g099230 | 43.617 | 94 | 48 | 2 | 16 | 104 | 3 | 96 | 3.68e-23 | 90.1 |
MS.gene56569.t1 | MTR_5g085390 | 33.974 | 156 | 83 | 5 | 16 | 154 | 10 | 162 | 9.42e-22 | 88.6 |
MS.gene56569.t1 | MTR_4g088035 | 38.372 | 86 | 53 | 0 | 16 | 101 | 7 | 92 | 9.80e-18 | 78.6 |
MS.gene56569.t1 | MTR_2g094730 | 30.392 | 102 | 67 | 3 | 15 | 114 | 2 | 101 | 5.75e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56569.t1 | AT1G31320 | 70.455 | 176 | 44 | 3 | 1 | 174 | 1 | 170 | 2.94e-73 | 218 |
MS.gene56569.t1 | AT2G30130 | 75.229 | 109 | 27 | 0 | 13 | 121 | 6 | 114 | 1.15e-57 | 179 |
MS.gene56569.t1 | AT1G16530 | 53.179 | 173 | 63 | 5 | 6 | 174 | 5 | 163 | 2.51e-57 | 177 |
MS.gene56569.t1 | AT5G63090 | 64.286 | 112 | 40 | 0 | 14 | 125 | 10 | 121 | 1.60e-49 | 158 |
MS.gene56569.t1 | AT5G63090 | 64.286 | 112 | 40 | 0 | 14 | 125 | 10 | 121 | 1.60e-49 | 158 |
MS.gene56569.t1 | AT5G63090 | 64.286 | 112 | 40 | 0 | 14 | 125 | 10 | 121 | 1.60e-49 | 158 |
MS.gene56569.t1 | AT5G63090 | 64.286 | 112 | 40 | 0 | 14 | 125 | 10 | 121 | 1.60e-49 | 158 |
MS.gene56569.t1 | AT1G07900 | 63.636 | 110 | 40 | 0 | 14 | 123 | 32 | 141 | 2.74e-48 | 155 |
MS.gene56569.t1 | AT2G28500 | 62.162 | 111 | 42 | 0 | 14 | 124 | 54 | 164 | 4.22e-47 | 154 |
MS.gene56569.t1 | AT2G30340 | 57.377 | 122 | 50 | 1 | 11 | 130 | 48 | 169 | 4.48e-47 | 154 |
MS.gene56569.t1 | AT2G30340 | 57.851 | 121 | 49 | 1 | 12 | 130 | 50 | 170 | 4.65e-47 | 154 |
MS.gene56569.t1 | AT3G27650 | 64.356 | 101 | 36 | 0 | 14 | 114 | 38 | 138 | 5.11e-46 | 148 |
MS.gene56569.t1 | AT2G40470 | 62.281 | 114 | 43 | 0 | 14 | 127 | 19 | 132 | 3.10e-45 | 147 |
MS.gene56569.t1 | AT2G40470 | 62.281 | 114 | 43 | 0 | 14 | 127 | 44 | 157 | 6.34e-45 | 147 |
MS.gene56569.t1 | AT2G23660 | 61.905 | 105 | 40 | 0 | 12 | 116 | 2 | 106 | 5.33e-44 | 148 |
MS.gene56569.t1 | AT2G23660 | 61.905 | 105 | 40 | 0 | 12 | 116 | 2 | 106 | 5.33e-44 | 148 |
MS.gene56569.t1 | AT2G23660 | 61.905 | 105 | 40 | 0 | 12 | 116 | 2 | 106 | 5.33e-44 | 148 |
MS.gene56569.t1 | AT5G66870 | 62.136 | 103 | 39 | 0 | 12 | 114 | 4 | 106 | 1.18e-41 | 142 |
MS.gene56569.t1 | AT3G26660 | 54.867 | 113 | 49 | 1 | 16 | 126 | 6 | 118 | 6.84e-41 | 134 |
MS.gene56569.t1 | AT3G26620 | 59.596 | 99 | 40 | 0 | 16 | 114 | 6 | 104 | 1.14e-40 | 134 |
MS.gene56569.t1 | AT1G65620 | 65.347 | 101 | 35 | 0 | 14 | 114 | 8 | 108 | 7.09e-40 | 134 |
MS.gene56569.t1 | AT1G65620 | 65.347 | 101 | 35 | 0 | 14 | 114 | 8 | 108 | 7.09e-40 | 134 |
MS.gene56569.t1 | AT1G65620 | 65.347 | 101 | 35 | 0 | 14 | 114 | 8 | 108 | 7.09e-40 | 134 |
MS.gene56569.t1 | AT1G65620 | 65.347 | 101 | 35 | 0 | 14 | 114 | 8 | 108 | 7.09e-40 | 134 |
MS.gene56569.t1 | AT1G65620 | 65.347 | 101 | 35 | 0 | 14 | 114 | 8 | 108 | 7.09e-40 | 134 |
MS.gene56569.t1 | AT3G11090 | 53.226 | 124 | 51 | 1 | 12 | 135 | 8 | 124 | 8.18e-40 | 133 |
MS.gene56569.t1 | AT2G42430 | 52.174 | 115 | 54 | 1 | 1 | 114 | 1 | 115 | 8.92e-39 | 132 |
MS.gene56569.t1 | AT3G03760 | 54.630 | 108 | 48 | 1 | 14 | 120 | 50 | 157 | 2.33e-37 | 130 |
MS.gene56569.t1 | AT4G00220 | 56.731 | 104 | 44 | 1 | 18 | 120 | 20 | 123 | 5.07e-36 | 125 |
MS.gene56569.t1 | AT2G31310 | 52.830 | 106 | 49 | 1 | 11 | 115 | 3 | 108 | 5.86e-36 | 124 |
MS.gene56569.t1 | AT4G00210 | 48.344 | 151 | 73 | 3 | 11 | 157 | 7 | 156 | 1.83e-35 | 123 |
MS.gene56569.t1 | AT2G42440 | 45.802 | 131 | 70 | 1 | 11 | 140 | 3 | 133 | 2.30e-35 | 124 |
MS.gene56569.t1 | AT2G45410 | 59.794 | 97 | 38 | 1 | 18 | 113 | 19 | 115 | 2.68e-33 | 117 |
MS.gene56569.t1 | AT2G45420 | 52.885 | 104 | 48 | 1 | 18 | 120 | 40 | 143 | 7.16e-33 | 118 |
MS.gene56569.t1 | AT5G06080 | 54.639 | 97 | 43 | 1 | 13 | 108 | 5 | 101 | 1.33e-32 | 115 |
MS.gene56569.t1 | AT3G58190 | 50.980 | 102 | 49 | 1 | 15 | 115 | 11 | 112 | 1.12e-31 | 114 |
MS.gene56569.t1 | AT3G50510 | 47.059 | 102 | 54 | 0 | 13 | 114 | 10 | 111 | 1.56e-28 | 105 |
MS.gene56569.t1 | AT3G50510 | 47.059 | 102 | 54 | 0 | 13 | 114 | 10 | 111 | 1.56e-28 | 105 |
MS.gene56569.t1 | AT1G72980 | 43.269 | 104 | 59 | 0 | 11 | 114 | 9 | 112 | 4.43e-28 | 104 |
MS.gene56569.t1 | AT3G13850 | 42.453 | 106 | 61 | 0 | 16 | 121 | 37 | 142 | 1.68e-27 | 104 |
MS.gene56569.t1 | AT3G47870 | 42.453 | 106 | 61 | 0 | 9 | 114 | 30 | 135 | 5.78e-27 | 103 |
MS.gene56569.t1 | AT5G35900 | 42.424 | 99 | 57 | 0 | 16 | 114 | 6 | 104 | 1.65e-24 | 95.1 |
MS.gene56569.t1 | AT1G06280 | 38.462 | 91 | 56 | 0 | 16 | 106 | 25 | 115 | 1.34e-19 | 82.0 |
MS.gene56569.t1 | AT2G19820 | 38.542 | 96 | 58 | 1 | 14 | 108 | 11 | 106 | 2.08e-19 | 79.7 |
MS.gene56569.t1 | AT5G15060 | 40.449 | 89 | 49 | 2 | 1 | 86 | 3 | 90 | 9.99e-18 | 75.9 |
MS.gene56569.t1 | AT1G36000 | 28.814 | 118 | 84 | 0 | 11 | 128 | 5 | 122 | 1.37e-14 | 67.0 |
MS.gene56569.t1 | AT4G22700 | 35.238 | 105 | 64 | 3 | 12 | 114 | 2 | 104 | 3.71e-14 | 67.4 |
MS.gene56569.t1 | AT2G19510 | 28.571 | 98 | 70 | 0 | 11 | 108 | 5 | 102 | 1.33e-12 | 61.6 |
MS.gene56569.t1 | AT3G27940 | 32.432 | 74 | 50 | 0 | 13 | 86 | 3 | 76 | 4.21e-11 | 58.5 |
MS.gene56569.t1 | AT3G27940 | 32.432 | 74 | 50 | 0 | 13 | 86 | 3 | 76 | 4.21e-11 | 58.5 |
MS.gene56569.t1 | AT3G27940 | 32.432 | 74 | 50 | 0 | 13 | 86 | 3 | 76 | 4.21e-11 | 58.5 |
Find 42 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCAAACTGCATCATCATTT+TGG | 0.226194 | 4.4:+29262190 | MS.gene56569:CDS |
GCTAATGTTCACAAAGTCTT+TGG | 0.302464 | 4.4:+29258788 | MS.gene56569:CDS |
CAGCTTGTGCTACAGCCAAT+TGG | 0.314995 | 4.4:-29262146 | None:intergenic |
CCACTATAGGTTGGGCTAGC+TGG | 0.339590 | 4.4:-29262231 | None:intergenic |
AGCTTGTGCTACAGCCAATT+GGG | 0.355950 | 4.4:-29262145 | None:intergenic |
ATGCAGTTTGGCGCACCCTT+AGG | 0.369688 | 4.4:-29262179 | None:intergenic |
CAATGTCAACAAGATGCTTC+AGG | 0.375428 | 4.4:+29258817 | MS.gene56569:CDS |
AAGCTGAGGCAGTGCACCTA+AGG | 0.409283 | 4.4:+29262163 | MS.gene56569:CDS |
GGCTCATCAGCAGGGAAGTA+AGG | 0.414185 | 4.4:-29258755 | None:intergenic |
TCCAAAATGATGATGCAGTT+TGG | 0.439033 | 4.4:-29262191 | None:intergenic |
AACTTGTGAGGCTCATCAGC+AGG | 0.445267 | 4.4:-29258764 | None:intergenic |
GCATCCCCTCTTTGATGCTC+AGG | 0.446024 | 4.4:-29262018 | None:intergenic |
TGATGATGGAGAGCCACTAT+AGG | 0.449087 | 4.4:-29262244 | None:intergenic |
CCAGCTAGCCCAACCTATAG+TGG | 0.471918 | 4.4:+29262231 | MS.gene56569:CDS |
TAATTGATTAACATGAAAGA+AGG | 0.473310 | 4.4:+29258644 | None:intergenic |
GACCCTGTGTATGGTTGTGT+GGG | 0.491390 | 4.4:+29262081 | MS.gene56569:CDS |
ATGGAGAGCCACTATAGGTT+GGG | 0.503486 | 4.4:-29262239 | None:intergenic |
TTGATTAACATGAAAGAAGG+TGG | 0.508411 | 4.4:+29258647 | None:intergenic |
GATGGAGAGCCACTATAGGT+TGG | 0.533235 | 4.4:-29262240 | None:intergenic |
TTGAATCACCATAGGCAGCT+TGG | 0.540807 | 4.4:-29262323 | None:intergenic |
TGATGTGCTACAAACCCAAT+TGG | 0.547025 | 4.4:+29262131 | MS.gene56569:CDS |
AGACCCTGTGTATGGTTGTG+TGG | 0.550798 | 4.4:+29262080 | MS.gene56569:CDS |
GCACATCAATCTGTTGCTGA+AGG | 0.564578 | 4.4:-29262116 | None:intergenic |
GTGGTGGACCAAGCTGCCTA+TGG | 0.571014 | 4.4:+29262315 | MS.gene56569:CDS |
CTTGCATGCAGCACAAGGTG+AGG | 0.585794 | 4.4:-29258693 | None:intergenic |
AGAAGCTTGCATGCAGCACA+AGG | 0.589929 | 4.4:-29258698 | None:intergenic |
AGAGTGAGAGACCCTGTGTA+TGG | 0.596799 | 4.4:+29262072 | MS.gene56569:CDS |
ACTTACCTGAGCATCAAAGA+GGG | 0.599006 | 4.4:+29262013 | MS.gene56569:CDS |
CACATCAATCTGTTGCTGAA+GGG | 0.604124 | 4.4:-29262115 | None:intergenic |
GACTTACCTGAGCATCAAAG+AGG | 0.607217 | 4.4:+29262012 | MS.gene56569:CDS |
AGCTGAGGCAGTGCACCTAA+GGG | 0.612206 | 4.4:+29262164 | MS.gene56569:CDS |
ATTAACATGAAAGAAGGTGG+AGG | 0.620343 | 4.4:+29258650 | None:intergenic |
TGAACATTAGCAAACTTGTG+AGG | 0.627465 | 4.4:-29258776 | None:intergenic |
CCCTGTGTATGGTTGTGTGG+GGG | 0.627665 | 4.4:+29262083 | MS.gene56569:CDS |
TCACCACATTGAATCACCAT+AGG | 0.629809 | 4.4:-29262331 | None:intergenic |
ACCCTGTGTATGGTTGTGTG+GGG | 0.630122 | 4.4:+29262082 | MS.gene56569:CDS |
AGGGGATGCAGTGAGTAGCA+TGG | 0.638211 | 4.4:+29262032 | MS.gene56569:CDS |
ATTGGCTGTAGCACAAGCTG+AGG | 0.642416 | 4.4:+29262149 | MS.gene56569:CDS |
GGTGGAGGTAACAAGAAGCA+AGG | 0.642495 | 4.4:+29258665 | MS.gene56569:CDS |
ACTTGTGAGGCTCATCAGCA+GGG | 0.650475 | 4.4:-29258763 | None:intergenic |
CTTACCTGAGCATCAAAGAG+GGG | 0.724679 | 4.4:+29262014 | MS.gene56569:CDS |
CTGCCTATGGTGATTCAATG+TGG | 0.740247 | 4.4:+29262328 | MS.gene56569:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAATAATAATAATAATAA+GGG | + | chr4.4:29259092-29259111 | MS.gene56569:intron | 0.0% |
!! | TAATAATAATAATAATAATA+AGG | + | chr4.4:29259091-29259110 | MS.gene56569:intron | 0.0% |
!! | TATTATTATTATTATTATTA+GGG | - | chr4.4:29259091-29259110 | None:intergenic | 0.0% |
!! | TTATTATTATTATTATTATT+AGG | - | chr4.4:29259092-29259111 | None:intergenic | 0.0% |
!! | ATATACTACATTATAATATT+AGG | + | chr4.4:29258973-29258992 | MS.gene56569:intron | 10.0% |
!! | AAATGCTATTAAAATTAAGT+AGG | + | chr4.4:29259594-29259613 | MS.gene56569:intron | 15.0% |
!! | AAATGCTATTAAAATTAAGT+AGG | - | chr4.4:29259613-29259594 | None:intergenic | 15.0% |
!! | AATGCTATTAAAATTAAGTA+GGG | + | chr4.4:29259595-29259614 | MS.gene56569:intron | 15.0% |
!! | AATGCTATTAAAATTAAGTA+GGG | - | chr4.4:29259614-29259595 | None:intergenic | 15.0% |
!! | AGAAATAAATATGAACAATT+TGG | - | chr4.4:29260071-29260090 | None:intergenic | 15.0% |
!! | AGATAAAAAGTAATAAAATC+TGG | - | chr4.4:29259373-29259392 | None:intergenic | 15.0% |
!! | CAAAAAATATTAGAAGAATA+AGG | - | chr4.4:29260608-29260627 | None:intergenic | 15.0% |
!! | TATGTATAATATTAGATAGA+TGG | - | chr4.4:29259780-29259799 | None:intergenic | 15.0% |
!! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr4.4:29259503-29259522 | MS.gene56569:intron | 15.0% |
!!! | AATTTTGCAATAATTTTTTG+CGG | - | chr4.4:29259338-29259357 | None:intergenic | 15.0% |
!!! | AGTAATTTTTTATTTCCTAA+TGG | - | chr4.4:29261341-29261360 | None:intergenic | 15.0% |
!!! | CATTATTCATTCATATTTTA+GGG | - | chr4.4:29261103-29261122 | None:intergenic | 15.0% |
!!! | CTTTAATTCATTTTCTTATT+GGG | + | chr4.4:29261171-29261190 | MS.gene56569:intron | 15.0% |
!!! | TATTCTTCTAATATTTTTTG+AGG | + | chr4.4:29260608-29260627 | MS.gene56569:intron | 15.0% |
!!! | TCATTATTCATTCATATTTT+AGG | - | chr4.4:29261104-29261123 | None:intergenic | 15.0% |
!!! | TCTTTAATTCATTTTCTTAT+TGG | + | chr4.4:29261170-29261189 | MS.gene56569:intron | 15.0% |
!! | AAAAAATGAGATAAGATAAG+AGG | + | chr4.4:29260454-29260473 | MS.gene56569:intron | 20.0% |
!! | AAACAAATTTGAATTGAGTA+GGG | - | chr4.4:29259243-29259262 | None:intergenic | 20.0% |
!! | AATATATGTCACATATTATG+TGG | + | chr4.4:29261479-29261498 | MS.gene56569:intron | 20.0% |
!! | ACATTGATATTTGATATAGT+TGG | - | chr4.4:29261928-29261947 | None:intergenic | 20.0% |
!! | ATAATATAGGGTAGAAATAA+AGG | - | chr4.4:29258878-29258897 | None:intergenic | 20.0% |
!! | ATATATGTCACATATTATGT+GGG | + | chr4.4:29261480-29261499 | MS.gene56569:intron | 20.0% |
!! | GAAAATTAAAATCCACAAAA+AGG | - | chr4.4:29260841-29260860 | None:intergenic | 20.0% |
!! | TAAACAAATTTGAATTGAGT+AGG | - | chr4.4:29259244-29259263 | None:intergenic | 20.0% |
!! | TAATATAGGGTAGAAATAAA+GGG | - | chr4.4:29258877-29258896 | None:intergenic | 20.0% |
!! | TTGAACTCTTTATAAAAATG+TGG | + | chr4.4:29260285-29260304 | MS.gene56569:intron | 20.0% |
!! | TTTCTTCATATTCCAATATT+AGG | + | chr4.4:29261041-29261060 | MS.gene56569:intron | 20.0% |
!!! | AATGATTTTGTGTATATCTT+AGG | - | chr4.4:29261522-29261541 | None:intergenic | 20.0% |
!!! | GAACAACTTGTTATAATATA+GGG | - | chr4.4:29258890-29258909 | None:intergenic | 20.0% |
!!! | TACCTTTTCTAATTTTTCAA+GGG | - | chr4.4:29260959-29260978 | None:intergenic | 20.0% |
!!! | TCTTCATTTTACTTTCTATT+TGG | + | chr4.4:29261313-29261332 | MS.gene56569:intron | 20.0% |
!!! | TGAACAACTTGTTATAATAT+AGG | - | chr4.4:29258891-29258910 | None:intergenic | 20.0% |
!!! | TTCACATAACATTGATTAAA+AGG | + | chr4.4:29260126-29260145 | MS.gene56569:intron | 20.0% |
!!! | TTTTCTTAATAAGCATGAAA+TGG | - | chr4.4:29259963-29259982 | None:intergenic | 20.0% |
! | AACCCTTGAAAAATTAGAAA+AGG | + | chr4.4:29260954-29260973 | MS.gene56569:intron | 25.0% |
! | AATTCAATGTAATTACGTGT+CGG | + | chr4.4:29261755-29261774 | MS.gene56569:intron | 25.0% |
! | AGTGCAGAAAAACAAAATTA+GGG | - | chr4.4:29259210-29259229 | None:intergenic | 25.0% |
! | GTCCATATCAAAAATATGTT+TGG | - | chr4.4:29262292-29262311 | None:intergenic | 25.0% |
! | TGATATCAGTTAACTTAAGT+GGG | - | chr4.4:29258938-29258957 | None:intergenic | 25.0% |
! | TTGATATCAGTTAACTTAAG+TGG | - | chr4.4:29258939-29258958 | None:intergenic | 25.0% |
!! | ACAAGACTAAGAAAGTTTTA+TGG | + | chr4.4:29259871-29259890 | MS.gene56569:intron | 25.0% |
!! | CAAATCAAAAAGTATGCATT+AGG | + | chr4.4:29261130-29261149 | MS.gene56569:intron | 25.0% |
!! | CTACCTTTTCTAATTTTTCA+AGG | - | chr4.4:29260960-29260979 | None:intergenic | 25.0% |
!! | TCTTTTGTACTGAAATAAGA+TGG | - | chr4.4:29259727-29259746 | None:intergenic | 25.0% |
!!! | AATAGTAAAACTAGTTTTGG+AGG | + | chr4.4:29260869-29260888 | MS.gene56569:intron | 25.0% |
!!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr4.4:29259532-29259551 | MS.gene56569:intron | 25.0% |
!!! | ACATATTTTTGATATGGACA+TGG | + | chr4.4:29262293-29262312 | MS.gene56569:CDS | 25.0% |
!!! | ACCAATAGTAAAACTAGTTT+TGG | + | chr4.4:29260866-29260885 | MS.gene56569:intron | 25.0% |
!!! | ATTTTGAGAAAAGTATCTTC+AGG | - | chr4.4:29260748-29260767 | None:intergenic | 25.0% |
!!! | CTAGTTTTACTATTGGTTAT+AGG | - | chr4.4:29260863-29260882 | None:intergenic | 25.0% |
!!! | GATTCATTGATTTTTGATGA+TGG | - | chr4.4:29262261-29262280 | None:intergenic | 25.0% |
!!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr4.4:29259531-29259550 | MS.gene56569:intron | 25.0% |
!!! | TCCAAAACTAGTTTTACTAT+TGG | - | chr4.4:29260870-29260889 | None:intergenic | 25.0% |
!!! | TGCCAAACATATTTTTGATA+TGG | + | chr4.4:29262287-29262306 | MS.gene56569:CDS | 25.0% |
AAGGAAACATATTCAATGCT+TGG | - | chr4.4:29261433-29261452 | None:intergenic | 30.0% | |
ATATCAGTTAACTTAAGTGG+GGG | - | chr4.4:29258936-29258955 | None:intergenic | 30.0% | |
ATATTAGGACATGACATTTG+TGG | + | chr4.4:29258988-29259007 | MS.gene56569:intron | 30.0% | |
ATTAGAAGAATAAGGATGTG+TGG | - | chr4.4:29260600-29260619 | None:intergenic | 30.0% | |
CAAGATTAGAACACTATGAA+AGG | - | chr4.4:29259469-29259488 | None:intergenic | 30.0% | |
CAGTGCAGAAAAACAAAATT+AGG | - | chr4.4:29259211-29259230 | None:intergenic | 30.0% | |
GAATATGTAGAAGATAAGAG+TGG | - | chr4.4:29258852-29258871 | None:intergenic | 30.0% | |
GATATCAGTTAACTTAAGTG+GGG | - | chr4.4:29258937-29258956 | None:intergenic | 30.0% | |
GTAAGTCCTGCAAATTAATA+AGG | - | chr4.4:29261999-29262018 | None:intergenic | 30.0% | |
TAGAAAAGGTAGAAAAGATG+AGG | + | chr4.4:29260968-29260987 | MS.gene56569:intron | 30.0% | |
TCATATAACCGTACATATGT+GGG | - | chr4.4:29261626-29261645 | None:intergenic | 30.0% | |
TGGACTTTGACAATGAAATA+AGG | - | chr4.4:29261452-29261471 | None:intergenic | 30.0% | |
TGTGACATATATTTGTGACA+TGG | - | chr4.4:29261472-29261491 | None:intergenic | 30.0% | |
TTACTTGGAAAAAACCATTC+TGG | - | chr4.4:29260929-29260948 | None:intergenic | 30.0% | |
TTAGAAGAATAAGGATGTGT+GGG | - | chr4.4:29260599-29260618 | None:intergenic | 30.0% | |
TTCAAATTCAATCATGGTCA+AGG | - | chr4.4:29260574-29260593 | None:intergenic | 30.0% | |
TTCAAGGGTTATTACTTACT+TGG | - | chr4.4:29260944-29260963 | None:intergenic | 30.0% | |
TTCTTATTGGGATAACCAAT+AGG | + | chr4.4:29261183-29261202 | MS.gene56569:intron | 30.0% | |
TTTCCATTTGAGAAAAAGAC+AGG | + | chr4.4:29260719-29260738 | MS.gene56569:intron | 30.0% | |
! | CTACTGCACACAATTATTTT+GGG | - | chr4.4:29259995-29260014 | None:intergenic | 30.0% |
! | TCACATTACAATCCTTTTTG+TGG | + | chr4.4:29260826-29260845 | MS.gene56569:intron | 30.0% |
!! | ACTTGTCCTTATTAATTTGC+AGG | + | chr4.4:29261990-29262009 | MS.gene56569:intron | 30.0% |
!! | AGACTAAGAAAGTTTTATGG+TGG | + | chr4.4:29259874-29259893 | MS.gene56569:intron | 30.0% |
!! | ATTTTGATAGAGACTAGAGA+AGG | - | chr4.4:29261953-29261972 | None:intergenic | 30.0% |
!! | TACAAGGTCGCTATTTTATA+GGG | + | chr4.4:29259626-29259645 | MS.gene56569:intron | 30.0% |
!! | TACAAGGTCGCTATTTTATA+GGG | - | chr4.4:29259645-29259626 | None:intergenic | 30.0% |
!! | TATTTTTGATATGGACATGG+TGG | + | chr4.4:29262296-29262315 | MS.gene56569:CDS | 30.0% |
!! | TTACAAGGTCGCTATTTTAT+AGG | + | chr4.4:29259625-29259644 | MS.gene56569:intron | 30.0% |
!! | TTACAAGGTCGCTATTTTAT+AGG | - | chr4.4:29259644-29259625 | None:intergenic | 30.0% |
AAGTAGGGACTAAACTTACA+AGG | + | chr4.4:29259610-29259629 | MS.gene56569:intron | 35.0% | |
AAGTAGGGACTAAACTTACA+AGG | - | chr4.4:29259629-29259610 | None:intergenic | 35.0% | |
AGATGAGACAGACCTAATAT+TGG | - | chr4.4:29261056-29261075 | None:intergenic | 35.0% | |
ATTCAATCATGGTCAAGGAA+AGG | - | chr4.4:29260569-29260588 | None:intergenic | 35.0% | |
CAATATTAGACAACTTCACG+TGG | - | chr4.4:29261398-29261417 | None:intergenic | 35.0% | |
CAATGATAATAGATGGTGTC+GGG | - | chr4.4:29260218-29260237 | None:intergenic | 35.0% | |
CATAAATGCCCACATATGTA+CGG | + | chr4.4:29261615-29261634 | MS.gene56569:intron | 35.0% | |
CCAAAATAATTGTGTGCAGT+AGG | + | chr4.4:29259993-29260012 | MS.gene56569:intron | 35.0% | |
CTACTCAATTTCAGCTACAA+TGG | + | chr4.4:29260189-29260208 | MS.gene56569:intron | 35.0% | |
GCAATGATAATAGATGGTGT+CGG | - | chr4.4:29260219-29260238 | None:intergenic | 35.0% | |
GCTAATGTTCACAAAGTCTT+TGG | + | chr4.4:29258788-29258807 | MS.gene56569:CDS | 35.0% | |
GGTAAAATCAACACTCTCTT+TGG | - | chr4.4:29260050-29260069 | None:intergenic | 35.0% | |
GTACATATGTGGGCATTTAT+GGG | - | chr4.4:29261616-29261635 | None:intergenic | 35.0% | |
GTCATATAACCGTACATATG+TGG | - | chr4.4:29261627-29261646 | None:intergenic | 35.0% | |
TACATATGTGGGCATTTATG+GGG | - | chr4.4:29261615-29261634 | None:intergenic | 35.0% | |
TAGAAGAATAAGGATGTGTG+GGG | - | chr4.4:29260598-29260617 | None:intergenic | 35.0% | |
TGAACATTAGCAAACTTGTG+AGG | - | chr4.4:29258779-29258798 | None:intergenic | 35.0% | |
TGGGGATTCAAATTCAATCA+TGG | - | chr4.4:29260580-29260599 | None:intergenic | 35.0% | |
TGTGTTTATAGGTCTTTGCA+GGG | + | chr4.4:29261810-29261829 | MS.gene56569:intron | 35.0% | |
TTCGCTGCAATGATAATAGA+TGG | - | chr4.4:29260225-29260244 | None:intergenic | 35.0% | |
TTGGAAAAAACCATTCTGGT+TGG | - | chr4.4:29260925-29260944 | None:intergenic | 35.0% | |
! | AAAAAACCATTCTGGTTGGT+TGG | - | chr4.4:29260921-29260940 | None:intergenic | 35.0% |
! | AATGATAATAGATGGTGTCG+GGG | - | chr4.4:29260217-29260236 | None:intergenic | 35.0% |
! | AGATCTTGCGTTTGTGTTTT+TGG | - | chr4.4:29261291-29261310 | None:intergenic | 35.0% |
! | ATTAGGTCTGTCTCATCTTT+TGG | + | chr4.4:29261058-29261077 | MS.gene56569:intron | 35.0% |
! | CCTACTGCACACAATTATTT+TGG | - | chr4.4:29259996-29260015 | None:intergenic | 35.0% |
! | TAGCCTGTCTTTTTCTCAAA+TGG | - | chr4.4:29260725-29260744 | None:intergenic | 35.0% |
! | TCCAAAATGATGATGCAGTT+TGG | - | chr4.4:29262194-29262213 | None:intergenic | 35.0% |
ACCATTCATTTCTCCACCTT+GGG | + | chr4.4:29261569-29261588 | MS.gene56569:intron | 40.0% | |
ACTTACCTGAGCATCAAAGA+GGG | + | chr4.4:29262013-29262032 | MS.gene56569:CDS | 40.0% | |
ACTTTCTATTTGGCGCCATT+AGG | + | chr4.4:29261323-29261342 | MS.gene56569:intron | 40.0% | |
AGAAATGAATGGTGACAGGT+GGG | - | chr4.4:29261562-29261581 | None:intergenic | 40.0% | |
AGTTAACCAATTAACGCCAC+CGG | - | chr4.4:29260494-29260513 | None:intergenic | 40.0% | |
CAACTGTCATAGTTATCCTG+AGG | - | chr4.4:29259939-29259958 | None:intergenic | 40.0% | |
CAATGTCAACAAGATGCTTC+AGG | + | chr4.4:29258817-29258836 | MS.gene56569:CDS | 40.0% | |
CACATCAATCTGTTGCTGAA+GGG | - | chr4.4:29262118-29262137 | None:intergenic | 40.0% | |
CGTACATATGTGGGCATTTA+TGG | - | chr4.4:29261617-29261636 | None:intergenic | 40.0% | |
CTGTGTTTATAGGTCTTTGC+AGG | + | chr4.4:29261809-29261828 | MS.gene56569:intron | 40.0% | |
CTTCACGTGGTGTATATAGA+AGG | - | chr4.4:29261385-29261404 | None:intergenic | 40.0% | |
GTATTGTTCTGATTCACCTC+AGG | + | chr4.4:29259920-29259939 | MS.gene56569:intron | 40.0% | |
TCACCACATTGAATCACCAT+AGG | - | chr4.4:29262334-29262353 | None:intergenic | 40.0% | |
TCATGGTCAAGGAAAGGAAT+TGG | - | chr4.4:29260563-29260582 | None:intergenic | 40.0% | |
TGATGTGCTACAAACCCAAT+TGG | + | chr4.4:29262131-29262150 | MS.gene56569:CDS | 40.0% | |
! | ATGTAATTACGTGTCGGTCT+CGG | + | chr4.4:29261761-29261780 | MS.gene56569:intron | 40.0% |
! | GCCAAACTGCATCATCATTT+TGG | + | chr4.4:29262190-29262209 | MS.gene56569:CDS | 40.0% |
! | TTTTGATATGGACATGGTGG+TGG | + | chr4.4:29262299-29262318 | MS.gene56569:CDS | 40.0% |
!! | GGAGGAGTATCTGTGTTTAT+AGG | + | chr4.4:29261799-29261818 | MS.gene56569:intron | 40.0% |
!! | TTTTAGGGATCACATGCACA+TGG | - | chr4.4:29261088-29261107 | None:intergenic | 40.0% |
!!! | CATCATTTTGGAACAGTGCA+GGG | + | chr4.4:29262202-29262221 | MS.gene56569:CDS | 40.0% |
!!! | TCATCATTTTGGAACAGTGC+AGG | + | chr4.4:29262201-29262220 | MS.gene56569:CDS | 40.0% |
AACGATGTGAGGTTTGAACG+CGG | - | chr4.4:29261003-29261022 | None:intergenic | 45.0% | |
ACCAAACCAACCAACCAGAA+TGG | + | chr4.4:29260912-29260931 | MS.gene56569:intron | 45.0% | |
AGAGGAATGCAAGCAAACTC+CGG | + | chr4.4:29260472-29260491 | MS.gene56569:intron | 45.0% | |
AGCTTGTGCTACAGCCAATT+GGG | - | chr4.4:29262148-29262167 | None:intergenic | 45.0% | |
ATGGAGAGCCACTATAGGTT+GGG | - | chr4.4:29262242-29262261 | None:intergenic | 45.0% | |
CACCATTCATTTCTCCACCT+TGG | + | chr4.4:29261568-29261587 | MS.gene56569:intron | 45.0% | |
CCAATAGGAGCTTCTAAACG+TGG | + | chr4.4:29261198-29261217 | MS.gene56569:intron | 45.0% | |
CCACGTTTAGAAGCTCCTAT+TGG | - | chr4.4:29261201-29261220 | None:intergenic | 45.0% | |
CCATTCATTTCTCCACCTTG+GGG | + | chr4.4:29261570-29261589 | MS.gene56569:intron | 45.0% | |
CTGCCTATGGTGATTCAATG+TGG | + | chr4.4:29262328-29262347 | MS.gene56569:CDS | 45.0% | |
CTTACCTGAGCATCAAAGAG+GGG | + | chr4.4:29262014-29262033 | MS.gene56569:CDS | 45.0% | |
GAAATGAATGGTGACAGGTG+GGG | - | chr4.4:29261561-29261580 | None:intergenic | 45.0% | |
GACTTACCTGAGCATCAAAG+AGG | + | chr4.4:29262012-29262031 | MS.gene56569:CDS | 45.0% | |
GAGAAATGAATGGTGACAGG+TGG | - | chr4.4:29261563-29261582 | None:intergenic | 45.0% | |
GCACATCAATCTGTTGCTGA+AGG | - | chr4.4:29262119-29262138 | None:intergenic | 45.0% | |
GCAGACAAAGAAACGATGTG+AGG | - | chr4.4:29261014-29261033 | None:intergenic | 45.0% | |
GTGGAGAAATGAATGGTGAC+AGG | - | chr4.4:29261566-29261585 | None:intergenic | 45.0% | |
TATGTGGGCATTTATGGGGA+CGG | - | chr4.4:29261611-29261630 | None:intergenic | 45.0% | |
TTATATGACCCTGCAGGACA+GGG | + | chr4.4:29261638-29261657 | MS.gene56569:intron | 45.0% | |
TTGAATCACCATAGGCAGCT+TGG | - | chr4.4:29262326-29262345 | None:intergenic | 45.0% | |
! | ACCATTCTGGTTGGTTGGTT+TGG | - | chr4.4:29260916-29260935 | None:intergenic | 45.0% |
! | CAGGTGGGGAGAATTTTGTA+TGG | - | chr4.4:29261547-29261566 | None:intergenic | 45.0% |
! | TGTGCATGACCCTGACTTTT+GGG | - | chr4.4:29261232-29261251 | None:intergenic | 45.0% |
! | TTGTGCATGACCCTGACTTT+TGG | - | chr4.4:29261233-29261252 | None:intergenic | 45.0% |
!! | TGATGATGGAGAGCCACTAT+AGG | - | chr4.4:29262247-29262266 | None:intergenic | 45.0% |
!! | TTTGGTGTGGACATGGCTTT+TGG | - | chr4.4:29260898-29260917 | None:intergenic | 45.0% |
!!! | AAGTAAATTTTTTTTTTATA+GGG | + | chr4.4:29259566-29259585 | MS.gene56569:intron | 5.0% |
!!! | TAAGTAAATTTTTTTTTTAT+AGG | + | chr4.4:29259565-29259584 | MS.gene56569:intron | 5.0% |
AACTTGTGAGGCTCATCAGC+AGG | - | chr4.4:29258767-29258786 | None:intergenic | 50.0% | |
ACCCTGTGTATGGTTGTGTG+GGG | + | chr4.4:29262082-29262101 | MS.gene56569:CDS | 50.0% | |
ACTTGTGAGGCTCATCAGCA+GGG | - | chr4.4:29258766-29258785 | None:intergenic | 50.0% | |
AGAAGCTTGCATGCAGCACA+AGG | - | chr4.4:29258701-29258720 | None:intergenic | 50.0% | |
AGACCCTGTGTATGGTTGTG+TGG | + | chr4.4:29262080-29262099 | MS.gene56569:CDS | 50.0% | |
AGAGTGAGAGACCCTGTGTA+TGG | + | chr4.4:29262072-29262091 | MS.gene56569:CDS | 50.0% | |
ATGGGAAAATCTCCCCAAGG+TGG | - | chr4.4:29261585-29261604 | None:intergenic | 50.0% | |
ATGTGGGCATTTATGGGGAC+GGG | - | chr4.4:29261610-29261629 | None:intergenic | 50.0% | |
ATTGGCTGTAGCACAAGCTG+AGG | + | chr4.4:29262149-29262168 | MS.gene56569:CDS | 50.0% | |
CAAACTCCGGTGGCGTTAAT+TGG | + | chr4.4:29260485-29260504 | MS.gene56569:intron | 50.0% | |
CACTTGTCACAACGACACGT+TGG | - | chr4.4:29260256-29260275 | None:intergenic | 50.0% | |
CAGCTTGTGCTACAGCCAAT+TGG | - | chr4.4:29262149-29262168 | None:intergenic | 50.0% | |
CATTTATGGGGACGGGACAT+GGG | - | chr4.4:29261603-29261622 | None:intergenic | 50.0% | |
CCCCAAGGTGGAGAAATGAA+TGG | - | chr4.4:29261573-29261592 | None:intergenic | 50.0% | |
GACATGGGAAAATCTCCCCA+AGG | - | chr4.4:29261588-29261607 | None:intergenic | 50.0% | |
GACCCTGTGTATGGTTGTGT+GGG | + | chr4.4:29262081-29262100 | MS.gene56569:CDS | 50.0% | |
GATGGAGAGCCACTATAGGT+TGG | - | chr4.4:29262243-29262262 | None:intergenic | 50.0% | |
GGTGGAGGTAACAAGAAGCA+AGG | + | chr4.4:29258665-29258684 | MS.gene56569:CDS | 50.0% | |
GTACGGTTATATGACCCTGC+AGG | + | chr4.4:29261632-29261651 | MS.gene56569:intron | 50.0% | |
GTTATATGACCCTGCAGGAC+AGG | + | chr4.4:29261637-29261656 | MS.gene56569:intron | 50.0% | |
TATATGACCCTGCAGGACAG+GGG | + | chr4.4:29261639-29261658 | MS.gene56569:intron | 50.0% | |
TCTCGGACACTGAAAGTTGG+AGG | + | chr4.4:29261778-29261797 | MS.gene56569:intron | 50.0% | |
! | GTGCATGACCCTGACTTTTG+GGG | - | chr4.4:29261231-29261250 | None:intergenic | 50.0% |
! | TGCATGACCCTGACTTTTGG+GGG | - | chr4.4:29261230-29261249 | None:intergenic | 50.0% |
!! | TCTGGTTGGTTGGTTTGGTG+TGG | - | chr4.4:29260911-29260930 | None:intergenic | 50.0% |
!! | TGGTTGGTTTGGTGTGGACA+TGG | - | chr4.4:29260905-29260924 | None:intergenic | 50.0% |
AAGCTGAGGCAGTGCACCTA+AGG | + | chr4.4:29262163-29262182 | MS.gene56569:CDS | 55.0% | |
AGCTGAGGCAGTGCACCTAA+GGG | + | chr4.4:29262164-29262183 | MS.gene56569:CDS | 55.0% | |
AGGGGATGCAGTGAGTAGCA+TGG | + | chr4.4:29262032-29262051 | MS.gene56569:CDS | 55.0% | |
ATGCAGTTTGGCGCACCCTT+AGG | - | chr4.4:29262182-29262201 | None:intergenic | 55.0% | |
CATCATACCCCTGTCCTGCA+GGG | - | chr4.4:29261649-29261668 | None:intergenic | 55.0% | |
CCAGCTAGCCCAACCTATAG+TGG | + | chr4.4:29262231-29262250 | MS.gene56569:CDS | 55.0% | |
CCCCCACACAACCATACACA+GGG | - | chr4.4:29262086-29262105 | None:intergenic | 55.0% | |
CCCTGTGTATGGTTGTGTGG+GGG | + | chr4.4:29262083-29262102 | MS.gene56569:CDS | 55.0% | |
CGGACACTGAAAGTTGGAGG+AGG | + | chr4.4:29261781-29261800 | MS.gene56569:intron | 55.0% | |
CGGTCTCGGACACTGAAAGT+TGG | + | chr4.4:29261775-29261794 | MS.gene56569:intron | 55.0% | |
CTTGCATGCAGCACAAGGTG+AGG | - | chr4.4:29258696-29258715 | None:intergenic | 55.0% | |
GCATCCCCTCTTTGATGCTC+AGG | - | chr4.4:29262021-29262040 | None:intergenic | 55.0% | |
GCATTTATGGGGACGGGACA+TGG | - | chr4.4:29261604-29261623 | None:intergenic | 55.0% | |
GGAATGCAAGCAAACTCCGG+TGG | + | chr4.4:29260475-29260494 | MS.gene56569:intron | 55.0% | |
GGCTCATCAGCAGGGAAGTA+AGG | - | chr4.4:29258758-29258777 | None:intergenic | 55.0% | |
GTGTTGCCCCCCAAAAGTCA+GGG | + | chr4.4:29261220-29261239 | MS.gene56569:intron | 55.0% | |
! | GCATGACCCTGACTTTTGGG+GGG | - | chr4.4:29261229-29261248 | None:intergenic | 55.0% |
!! | CCACTATAGGTTGGGCTAGC+TGG | - | chr4.4:29262234-29262253 | None:intergenic | 55.0% |
GCATCATACCCCTGTCCTGC+AGG | - | chr4.4:29261650-29261669 | None:intergenic | 60.0% | |
GCCCCCACACAACCATACAC+AGG | - | chr4.4:29262087-29262106 | None:intergenic | 60.0% | |
! | GGTGTTGCCCCCCAAAAGTC+AGG | + | chr4.4:29261219-29261238 | MS.gene56569:intron | 60.0% |
!! | GTGGTGGACCAAGCTGCCTA+TGG | + | chr4.4:29262315-29262334 | MS.gene56569:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 29258656 | 29262353 | 29258656 | ID=MS.gene56569 |
chr4.4 | mRNA | 29258656 | 29262353 | 29258656 | ID=MS.gene56569.t1;Parent=MS.gene56569 |
chr4.4 | exon | 29258656 | 29258838 | 29258656 | ID=MS.gene56569.t1.exon1;Parent=MS.gene56569.t1 |
chr4.4 | CDS | 29258656 | 29258838 | 29258656 | ID=cds.MS.gene56569.t1;Parent=MS.gene56569.t1 |
chr4.4 | exon | 29262012 | 29262353 | 29262012 | ID=MS.gene56569.t1.exon2;Parent=MS.gene56569.t1 |
chr4.4 | CDS | 29262012 | 29262353 | 29262012 | ID=cds.MS.gene56569.t1;Parent=MS.gene56569.t1 |
Gene Sequence |
Protein sequence |