AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene56735

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56735.t1 MTR_6g009430 91.892 296 16 2 6 301 49 336 0.0 513
MS.gene56735.t1 MTR_5g029840 47.134 157 72 3 6 155 49 201 5.75e-40 142
MS.gene56735.t1 MTR_3g461490 67.416 89 29 0 6 94 49 137 1.67e-39 141
MS.gene56735.t1 MTR_3g045430 46.875 192 91 6 7 195 51 234 4.41e-39 139
MS.gene56735.t1 MTR_4g478180 46.809 141 64 2 6 139 50 186 5.16e-39 140
MS.gene56735.t1 MTR_7g076740 63.953 86 31 0 6 91 50 135 2.90e-38 137
MS.gene56735.t1 MTR_4g073420 66.667 84 28 0 6 89 49 132 8.78e-38 135
MS.gene56735.t1 MTR_4g091490 64.835 91 31 1 6 96 50 139 1.42e-37 137
MS.gene56735.t1 MTR_2g011660 70.000 80 24 0 6 85 50 129 2.07e-37 136
MS.gene56735.t1 MTR_1g112760 67.901 81 26 0 6 86 50 130 2.42e-37 132
MS.gene56735.t1 MTR_7g011170 65.882 85 29 0 6 90 49 133 2.85e-37 135
MS.gene56735.t1 MTR_8g031360 65.854 82 28 0 6 87 51 132 5.14e-37 134
MS.gene56735.t1 MTR_2g089620 61.702 94 36 0 6 99 49 142 6.29e-37 134
MS.gene56735.t1 MTR_5g007370 57.447 94 40 0 6 99 49 142 6.86e-37 133
MS.gene56735.t1 MTR_3g077110 64.773 88 31 0 6 93 49 136 1.64e-36 134
MS.gene56735.t1 MTR_4g102380 66.265 83 28 0 6 88 49 131 1.70e-36 132
MS.gene56735.t1 MTR_3g074520 53.774 106 46 1 6 108 49 154 2.82e-36 133
MS.gene56735.t1 MTR_1g017000 58.879 107 40 3 6 111 50 153 8.82e-36 129
MS.gene56735.t1 MTR_7g110830 67.857 84 27 0 6 89 49 132 1.23e-35 132
MS.gene56735.t1 MTR_1g085640 65.476 84 29 0 6 89 49 132 2.57e-35 131
MS.gene56735.t1 MTR_4g105130 56.436 101 44 0 6 106 49 149 3.37e-35 130
MS.gene56735.t1 MTR_1g085040 56.637 113 45 2 6 118 49 157 4.47e-35 130
MS.gene56735.t1 MTR_6g012690 67.500 80 26 0 6 85 49 128 5.83e-35 130
MS.gene56735.t1 MTR_8g095390 63.095 84 31 0 6 89 49 132 6.93e-35 129
MS.gene56735.t1 MTR_4g082290 55.769 104 37 1 6 100 49 152 8.73e-35 130
MS.gene56735.t1 MTR_4g082230 55.769 104 37 1 6 100 49 152 9.98e-35 130
MS.gene56735.t1 MTR_5g079670 52.830 106 49 1 6 111 48 152 1.16e-34 125
MS.gene56735.t1 MTR_5g078140 64.634 82 29 0 6 87 49 130 1.87e-34 127
MS.gene56735.t1 MTR_3g065440 64.706 85 30 0 6 90 49 133 3.77e-34 126
MS.gene56735.t1 MTR_3g083540 64.198 81 29 0 6 86 78 158 1.34e-33 125
MS.gene56735.t1 MTR_2g064160 64.634 82 29 0 6 87 48 129 4.48e-33 124
MS.gene56735.t1 MTR_4g485530 67.532 77 25 0 7 83 50 126 9.95e-33 119
MS.gene56735.t1 MTR_3g097450 63.291 79 29 0 6 84 49 127 1.45e-32 122
MS.gene56735.t1 MTR_4g057635 63.291 79 29 0 6 84 50 128 4.59e-30 116
MS.gene56735.t1 MTR_5g042030 57.317 82 35 0 6 87 44 125 5.73e-30 115
MS.gene56735.t1 MTR_1g017140 41.830 153 66 4 6 144 50 193 8.73e-30 115
MS.gene56735.t1 MTR_7g102110 67.606 71 23 0 6 76 50 120 1.34e-29 114
MS.gene56735.t1 MTR_7g117730 70.588 68 20 0 6 73 49 116 1.79e-29 113
MS.gene56735.t1 MTR_5g014990 66.667 69 23 0 6 74 50 118 2.95e-29 113
MS.gene56735.t1 MTR_7g111290 53.571 112 51 1 6 116 7 118 3.35e-29 114
MS.gene56735.t1 MTR_3g103570 69.565 69 21 0 6 74 50 118 4.46e-29 114
MS.gene56735.t1 MTR_7g111290 53.571 112 51 1 6 116 49 160 1.06e-28 113
MS.gene56735.t1 MTR_2g099740 44.961 129 56 2 6 119 49 177 1.15e-28 114
MS.gene56735.t1 MTR_3g028740 67.647 68 22 0 6 73 59 126 1.33e-28 112
MS.gene56735.t1 MTR_8g098860 62.857 70 26 0 6 75 49 118 2.59e-28 111
MS.gene56735.t1 MTR_2g097910 61.972 71 27 0 6 76 57 127 1.17e-27 109
MS.gene56735.t1 MTR_1g043080 51.923 104 45 2 6 104 49 152 1.32e-27 108
MS.gene56735.t1 MTR_7g115650 62.857 70 26 0 6 75 49 118 1.50e-27 106
MS.gene56735.t1 MTR_8g027345 65.714 70 24 0 6 75 49 118 1.55e-27 108
MS.gene56735.t1 MTR_8g017440 47.321 112 51 2 6 111 49 158 1.93e-27 109
MS.gene56735.t1 MTR_5g010020 69.355 62 19 0 6 67 49 110 1.95e-27 109
MS.gene56735.t1 MTR_1g076150 67.647 68 22 0 6 73 49 116 2.44e-27 107
MS.gene56735.t1 MTR_6g090405 68.116 69 22 0 6 74 50 118 3.62e-27 107
MS.gene56735.t1 MTR_0251s0050 66.176 68 23 0 6 73 50 117 3.62e-27 107
MS.gene56735.t1 MTR_7g096930 64.706 68 24 0 6 73 49 116 4.30e-27 107
MS.gene56735.t1 MTR_4g121460 42.748 131 64 3 6 125 49 179 6.25e-27 108
MS.gene56735.t1 MTR_4g125520 66.176 68 23 0 6 73 49 116 8.47e-27 107
MS.gene56735.t1 MTR_8g017340 62.667 75 28 0 6 80 50 124 1.36e-26 109
MS.gene56735.t1 MTR_1g100653 64.706 68 24 0 6 73 49 116 1.87e-26 105
MS.gene56735.t1 MTR_0008s0390 63.768 69 25 0 6 74 50 118 1.93e-26 105
MS.gene56735.t1 MTR_2g034790 61.765 68 26 0 6 73 49 116 2.19e-26 106
MS.gene56735.t1 MTR_8g017540 52.128 94 44 1 6 99 95 187 2.35e-26 107
MS.gene56735.t1 MTR_2g089450 62.857 70 26 0 6 75 49 118 2.81e-26 104
MS.gene56735.t1 MTR_4g100720 65.672 67 23 0 6 72 50 116 3.63e-26 102
MS.gene56735.t1 MTR_4g063100 63.636 66 24 0 7 72 16 81 4.77e-26 103
MS.gene56735.t1 MTR_8g017350 61.333 75 29 0 6 80 50 124 5.15e-26 108
MS.gene56735.t1 MTR_0197s0010 49.057 106 51 1 6 108 38 143 6.38e-26 102
MS.gene56735.t1 MTR_8g020490 62.857 70 26 0 6 75 45 114 7.61e-26 103
MS.gene56735.t1 MTR_4g063100 63.636 66 24 0 7 72 45 110 7.93e-26 103
MS.gene56735.t1 MTR_8g017390 63.768 69 25 0 6 74 50 118 8.61e-26 106
MS.gene56735.t1 MTR_7g087130 59.740 77 29 1 6 80 49 125 9.30e-26 104
MS.gene56735.t1 MTR_8g017500 46.789 109 55 2 6 111 49 157 9.64e-26 105
MS.gene56735.t1 MTR_2g095520 69.355 62 19 0 6 67 50 111 9.72e-26 104
MS.gene56735.t1 MTR_2g089420 29.195 298 160 10 6 299 48 298 9.74e-26 106
MS.gene56735.t1 MTR_7g035075 62.687 67 25 0 7 73 52 118 1.22e-25 101
MS.gene56735.t1 MTR_4g128670 69.355 62 19 0 6 67 50 111 1.44e-25 104
MS.gene56735.t1 MTR_1g043050 59.420 69 28 0 6 74 49 117 2.35e-25 102
MS.gene56735.t1 MTR_4g065017 31.301 246 146 4 6 251 54 276 2.49e-25 103
MS.gene56735.t1 MTR_0063s0090 52.273 88 38 1 6 89 49 136 2.76e-25 101
MS.gene56735.t1 MTR_3g039990 61.972 71 27 0 6 76 50 120 2.82e-25 103
MS.gene56735.t1 MTR_1g045610 63.636 66 24 0 7 72 59 124 3.07e-25 101
MS.gene56735.t1 MTR_7g010210 62.857 70 26 0 6 75 49 118 3.13e-25 103
MS.gene56735.t1 MTR_7g010210 62.857 70 26 0 6 75 49 118 3.76e-25 102
MS.gene56735.t1 MTR_0008s0470 59.420 69 28 0 6 74 50 118 4.13e-25 102
MS.gene56735.t1 MTR_4g097570 70.492 61 18 0 6 66 51 111 7.04e-25 101
MS.gene56735.t1 MTR_4g097570 70.492 61 18 0 6 66 50 110 7.28e-25 101
MS.gene56735.t1 MTR_1g062940 62.687 67 25 0 7 73 44 110 9.91e-25 99.4
MS.gene56735.t1 MTR_1g100667 59.420 69 28 0 7 75 51 119 1.09e-24 100
MS.gene56735.t1 MTR_1g110460 48.810 84 43 0 6 89 63 146 1.48e-24 101
MS.gene56735.t1 MTR_6g006030 57.143 70 30 0 7 76 52 121 2.55e-24 98.2
MS.gene56735.t1 MTR_0140s0030 58.571 70 29 0 6 75 50 119 3.82e-24 100
MS.gene56735.t1 MTR_0489s0020 58.571 70 29 0 6 75 50 119 3.82e-24 100
MS.gene56735.t1 MTR_2g096380 59.701 67 27 0 6 72 24 90 4.73e-24 97.8
MS.gene56735.t1 MTR_8g042410 58.209 67 28 0 6 72 74 140 4.98e-24 102
MS.gene56735.t1 MTR_5g079290 59.420 69 28 0 6 74 54 122 5.32e-24 98.6
MS.gene56735.t1 MTR_5g079120 60.870 69 27 0 6 74 98 166 5.73e-24 99.4
MS.gene56735.t1 MTR_5g078910 43.307 127 65 2 6 126 44 169 5.93e-24 99.4
MS.gene56735.t1 MTR_1g073170 62.121 66 25 0 7 72 58 123 5.95e-24 98.2
MS.gene56735.t1 MTR_2g096380 59.701 67 27 0 6 72 43 109 8.59e-24 97.4
MS.gene56735.t1 MTR_6g055910 47.917 96 49 1 7 102 23 117 8.81e-24 97.8
MS.gene56735.t1 MTR_2g067420 67.742 62 20 0 6 67 51 112 9.10e-24 99.4
MS.gene56735.t1 MTR_3g011610 59.701 67 27 0 6 72 74 140 9.61e-24 101
MS.gene56735.t1 MTR_3g052430 56.716 67 29 0 6 72 78 144 1.05e-23 101
MS.gene56735.t1 MTR_3g052450 55.224 67 30 0 6 72 77 143 1.89e-23 100
MS.gene56735.t1 MTR_6g055910 47.917 96 49 1 7 102 52 146 2.49e-23 97.1
MS.gene56735.t1 MTR_5g079220 59.420 69 28 0 6 74 58 126 2.54e-23 97.1
MS.gene56735.t1 MTR_3g463400 49.020 102 47 3 3 101 164 263 2.80e-23 99.4
MS.gene56735.t1 MTR_5g070020 32.418 182 104 4 3 173 153 326 4.59e-23 97.8
MS.gene56735.t1 MTR_5g078800 59.420 69 28 0 6 74 44 112 4.61e-23 96.3
MS.gene56735.t1 MTR_0001s0360 59.420 69 28 0 6 74 44 112 4.69e-23 95.9
MS.gene56735.t1 MTR_0008s0280 57.576 66 28 0 6 71 49 114 7.69e-23 94.7
MS.gene56735.t1 MTR_0247s0040 61.538 65 25 0 6 70 44 108 1.32e-22 92.8
MS.gene56735.t1 MTR_1g083630 56.164 73 31 1 6 78 49 120 1.57e-22 97.8
MS.gene56735.t1 MTR_7g017260 57.971 69 29 0 6 74 64 132 2.20e-22 94.4
MS.gene56735.t1 MTR_5g078860 57.971 69 29 0 6 74 44 112 3.38e-22 94.7
MS.gene56735.t1 MTR_1g086510 54.795 73 33 0 7 79 59 131 3.65e-22 93.6
MS.gene56735.t1 MTR_5g078950 45.238 126 63 2 6 126 44 168 5.27e-22 93.2
MS.gene56735.t1 MTR_1g021230 56.716 67 29 0 6 72 94 160 6.22e-22 95.5
MS.gene56735.t1 MTR_1g086530 52.055 73 35 0 7 79 71 143 1.54e-21 92.4
MS.gene56735.t1 MTR_8g060940 60.938 64 25 0 6 69 44 107 3.80e-21 90.5
MS.gene56735.t1 MTR_0193s0090 55.072 69 31 0 6 74 44 112 4.08e-21 89.4
MS.gene56735.t1 MTR_5g016510 45.882 85 46 0 7 91 40 124 7.57e-21 90.9
MS.gene56735.t1 MTR_6g012180 34.591 159 72 2 6 164 49 175 5.26e-20 88.6
MS.gene56735.t1 MTR_5g078930 55.224 67 30 0 6 72 46 112 8.98e-20 86.3
MS.gene56735.t1 MTR_4g019370 36.800 125 75 1 7 131 73 193 9.09e-20 88.6
MS.gene56735.t1 MTR_2g088170 56.716 67 29 0 6 72 66 132 2.14e-19 88.2
MS.gene56735.t1 MTR_4g094982 51.515 66 32 0 7 72 40 105 2.28e-19 86.3
MS.gene56735.t1 MTR_4g105660 52.174 69 33 0 7 75 215 283 2.75e-19 87.8
MS.gene56735.t1 MTR_5g062790 46.753 77 39 2 6 81 46 121 4.62e-19 85.9
MS.gene56735.t1 MTR_3g101290 53.030 66 31 0 7 72 72 137 4.62e-19 84.3
MS.gene56735.t1 MTR_7g451170 49.254 67 34 0 6 72 225 291 5.91e-19 86.7
MS.gene56735.t1 MTR_7g109320 60.294 68 27 0 6 73 49 116 9.13e-19 85.9
MS.gene56735.t1 MTR_5g088080 47.368 76 38 2 6 80 49 123 1.03e-18 84.3
MS.gene56735.t1 MTR_5g088150 47.368 76 38 2 6 80 49 123 1.03e-18 84.3
MS.gene56735.t1 MTR_5g488210 47.368 76 38 2 6 80 49 123 1.03e-18 84.3
MS.gene56735.t1 MTR_5g088640 46.753 77 39 2 6 81 49 124 1.06e-18 84.3
MS.gene56735.t1 MTR_5g488170 47.368 76 38 2 6 80 49 123 1.09e-18 83.6
MS.gene56735.t1 MTR_4g128190 47.368 76 39 1 6 80 35 110 1.78e-18 83.2
MS.gene56735.t1 MTR_7g037260 50.000 70 35 0 6 75 179 248 2.25e-18 84.7
MS.gene56735.t1 MTR_3g077650 48.571 70 36 0 6 75 215 284 4.91e-18 84.3
MS.gene56735.t1 MTR_4g088015 50.000 66 33 0 6 71 255 320 6.71e-18 84.0
MS.gene56735.t1 MTR_5g049190 47.826 69 36 0 7 75 54 122 9.15e-18 81.3
MS.gene56735.t1 MTR_6g015455 49.333 75 38 0 7 81 40 114 1.01e-17 84.0
MS.gene56735.t1 MTR_8g006470 53.521 71 31 2 7 76 48 117 1.13e-17 81.6
MS.gene56735.t1 MTR_6g074860 45.238 84 42 2 7 86 39 122 1.46e-17 80.5
MS.gene56735.t1 MTR_7g061330 53.731 67 31 0 7 73 148 214 1.56e-17 83.2
MS.gene56735.t1 MTR_7g461410 53.731 67 31 0 7 73 148 214 1.56e-17 83.2
MS.gene56735.t1 MTR_2g033170 54.795 73 33 0 7 79 62 134 1.57e-17 82.0
MS.gene56735.t1 MTR_4g029540 47.312 93 45 3 7 98 48 137 1.97e-17 81.3
MS.gene56735.t1 MTR_5g082910 52.381 63 30 0 7 69 54 116 2.07e-17 80.9
MS.gene56735.t1 MTR_7g061330 53.731 67 31 0 7 73 112 178 2.27e-17 82.4
MS.gene56735.t1 MTR_7g035350 50.769 65 32 0 6 70 259 323 3.88e-17 81.6
MS.gene56735.t1 MTR_1g057980 49.231 65 33 0 6 70 114 178 5.28e-17 80.1
MS.gene56735.t1 MTR_5g088610 48.684 76 37 2 7 81 47 121 5.61e-17 80.5
MS.gene56735.t1 MTR_4g123040 54.795 73 33 0 7 79 62 134 7.02e-17 79.7
MS.gene56735.t1 MTR_5g041570 46.479 71 38 0 3 73 165 235 8.05e-16 77.8
MS.gene56735.t1 MTR_7g450950 43.662 71 40 0 6 76 191 261 1.64e-15 76.3
MS.gene56735.t1 MTR_3g110028 47.761 67 35 0 7 73 120 186 2.42e-15 77.0
MS.gene56735.t1 MTR_4g063100 60.870 46 18 0 27 72 1 46 4.78e-15 72.4
MS.gene56735.t1 MTR_4g082040 45.714 70 38 0 3 72 136 205 5.25e-15 75.1
MS.gene56735.t1 MTR_1g026870 46.269 67 36 0 7 73 120 186 1.10e-14 74.7
MS.gene56735.t1 MTR_6g027340 45.161 62 34 0 6 67 50 111 1.12e-14 71.6
MS.gene56735.t1 MTR_6g027360 45.902 61 33 0 7 67 113 173 2.17e-14 72.8
MS.gene56735.t1 MTR_2g096380 58.696 46 19 0 27 72 1 46 6.08e-14 68.9
MS.gene56735.t1 MTR_7g037130 43.077 65 37 0 6 70 179 243 1.73e-13 70.5
MS.gene56735.t1 MTR_6g055910 42.105 76 43 1 27 102 2 76 2.77e-13 68.2
MS.gene56735.t1 MTR_6g027370 45.455 66 36 0 7 72 134 199 1.91e-12 67.4
MS.gene56735.t1 MTR_5g010650 48.333 60 31 0 7 66 145 204 2.87e-12 67.4
MS.gene56735.t1 MTR_7g086960 44.286 70 39 0 3 72 120 189 2.88e-12 66.6
MS.gene56735.t1 MTR_5g007300 65.000 40 14 0 6 45 101 140 3.65e-12 63.2
MS.gene56735.t1 MTR_3g089045 36.364 110 69 1 7 116 51 159 3.74e-12 65.9
MS.gene56735.t1 MTR_1g085880 52.239 67 31 1 6 71 49 115 5.67e-12 63.9
MS.gene56735.t1 MTR_1g085770 52.239 67 31 1 6 71 49 115 9.77e-12 64.7
MS.gene56735.t1 MTR_5g007310 65.000 40 14 0 51 90 2 41 1.25e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56735.t1 AT3G28470 40.938 320 114 11 6 301 49 317 5.35e-49 166
MS.gene56735.t1 AT5G56110 64.646 99 29 1 6 104 49 141 1.87e-40 143
MS.gene56735.t1 AT5G16770 51.163 129 62 1 6 134 49 176 4.07e-40 142
MS.gene56735.t1 AT5G16770 51.163 129 62 1 6 134 49 176 4.07e-40 142
MS.gene56735.t1 AT5G16770 51.163 129 62 1 6 134 49 176 7.61e-40 142
MS.gene56735.t1 AT5G16770 51.163 129 62 1 6 134 49 176 7.61e-40 142
MS.gene56735.t1 AT5G10280 46.324 136 71 1 6 141 49 182 5.98e-39 140
MS.gene56735.t1 AT4G21440 52.344 128 55 2 6 131 49 172 2.18e-38 139
MS.gene56735.t1 AT4G12350 54.386 114 48 1 6 119 49 158 8.56e-38 135
MS.gene56735.t1 AT1G57560 48.175 137 59 2 6 142 49 173 1.19e-37 136
MS.gene56735.t1 AT4G05100 71.250 80 23 0 6 85 50 129 1.24e-37 136
MS.gene56735.t1 AT3G02940 70.000 80 24 0 6 85 49 128 1.62e-37 135
MS.gene56735.t1 AT3G02940 70.000 80 24 0 6 85 49 128 2.83e-37 135
MS.gene56735.t1 AT3G02940 70.000 80 24 0 6 85 49 128 2.83e-37 135
MS.gene56735.t1 AT1G57560 66.265 83 28 0 6 88 49 131 6.12e-37 133
MS.gene56735.t1 AT5G15310 46.207 145 68 4 6 141 49 192 7.33e-37 132
MS.gene56735.t1 AT1G09540 66.667 84 28 0 6 89 49 132 7.35e-37 135
MS.gene56735.t1 AT4G22680 51.754 114 55 0 6 119 49 162 8.52e-37 132
MS.gene56735.t1 AT5G15310 46.207 145 68 4 6 141 49 192 1.18e-36 133
MS.gene56735.t1 AT4G34990 47.692 130 65 1 6 135 49 175 1.45e-36 132
MS.gene56735.t1 AT5G26660 67.901 81 26 0 6 86 18 98 1.46e-36 133
MS.gene56735.t1 AT5G15310 46.207 145 68 4 6 141 49 192 1.52e-36 133
MS.gene56735.t1 AT4G38620 65.060 83 29 0 6 88 49 131 3.95e-36 131
MS.gene56735.t1 AT2G16720 43.571 140 62 3 6 128 49 188 4.20e-36 130
MS.gene56735.t1 AT3G01140 65.116 86 30 0 6 91 49 134 4.45e-36 132
MS.gene56735.t1 AT5G26660 67.901 81 26 0 6 86 49 129 7.84e-36 132
MS.gene56735.t1 AT4G28110 67.500 80 26 0 6 85 49 128 8.01e-36 130
MS.gene56735.t1 AT5G65230 62.353 85 32 0 6 90 49 133 1.17e-35 130
MS.gene56735.t1 AT3G01140 65.116 86 30 0 6 91 92 177 1.54e-35 132
MS.gene56735.t1 AT5G54230 59.184 98 36 1 6 103 49 142 2.11e-35 130
MS.gene56735.t1 AT1G34670 56.842 95 41 0 6 100 49 143 2.87e-35 130
MS.gene56735.t1 AT5G61420 63.415 82 30 0 6 87 49 130 2.99e-35 130
MS.gene56735.t1 AT3G61250 62.963 81 30 0 6 86 49 129 4.82e-35 129
MS.gene56735.t1 AT1G66230 65.476 84 29 0 6 89 49 132 8.56e-35 127
MS.gene56735.t1 AT5G62320 66.265 83 28 0 6 88 57 139 8.75e-35 126
MS.gene56735.t1 AT4G17785 51.923 104 50 0 6 109 50 153 1.42e-34 129
MS.gene56735.t1 AT5G07700 64.634 82 29 0 6 87 49 130 1.46e-34 128
MS.gene56735.t1 AT5G07700 64.634 82 29 0 6 87 49 130 1.46e-34 128
MS.gene56735.t1 AT3G13540 65.432 81 28 0 6 86 60 140 1.66e-34 126
MS.gene56735.t1 AT4G17785 51.923 104 50 0 6 109 50 153 2.18e-34 128
MS.gene56735.t1 AT1G22640 61.176 85 33 0 6 90 49 133 3.56e-34 125
MS.gene56735.t1 AT4G09460 60.241 83 33 0 6 88 49 131 9.31e-34 124
MS.gene56735.t1 AT5G16600 63.855 83 30 0 6 88 49 131 1.25e-33 125
MS.gene56735.t1 AT5G07690 62.195 82 31 0 6 87 49 130 1.26e-33 125
MS.gene56735.t1 AT1G18570 63.415 82 30 0 6 87 50 131 2.06e-33 125
MS.gene56735.t1 AT4G01680 63.095 84 31 0 6 89 49 132 3.23e-33 122
MS.gene56735.t1 AT5G60890 60.494 81 32 0 6 86 49 129 6.22e-33 123
MS.gene56735.t1 AT1G74430 60.976 82 32 0 6 87 49 130 6.44e-33 122
MS.gene56735.t1 AT4G01680 63.095 84 31 0 6 89 49 132 7.56e-33 124
MS.gene56735.t1 AT4G01680 63.095 84 31 0 6 89 61 144 8.61e-33 124
MS.gene56735.t1 AT1G35515 60.494 81 32 0 6 86 49 129 9.15e-32 117
MS.gene56735.t1 AT1G18960 32.166 314 145 10 6 301 44 307 1.19e-31 120
MS.gene56735.t1 AT1G18710 56.790 81 35 0 6 86 49 129 1.78e-31 118
MS.gene56735.t1 AT5G14340 58.333 84 35 0 6 89 61 144 3.93e-31 117
MS.gene56735.t1 AT3G12720 61.538 78 30 0 6 83 59 136 2.55e-30 116
MS.gene56735.t1 AT5G23000 71.014 69 20 0 6 74 50 118 4.95e-30 116
MS.gene56735.t1 AT3G08500 42.759 145 71 1 6 138 67 211 7.32e-30 116
MS.gene56735.t1 AT5G57620 68.116 69 22 0 6 74 50 118 7.87e-30 115
MS.gene56735.t1 AT5G14750 52.632 114 49 3 6 118 19 128 8.43e-30 111
MS.gene56735.t1 AT1G63910 43.750 128 53 1 6 114 49 176 8.62e-30 116
MS.gene56735.t1 AT5G14750 52.632 114 49 3 6 118 53 162 8.81e-30 112
MS.gene56735.t1 AT5G12870 64.789 71 25 0 6 76 55 125 9.20e-30 114
MS.gene56735.t1 AT4G37780 69.565 69 21 0 6 74 50 118 1.45e-29 114
MS.gene56735.t1 AT1G74080 58.025 81 34 0 6 86 49 129 1.79e-29 114
MS.gene56735.t1 AT3G49690 68.116 69 22 0 6 74 50 118 3.60e-29 113
MS.gene56735.t1 AT3G13890 57.143 91 39 0 6 96 49 139 7.66e-29 113
MS.gene56735.t1 AT3G13890 57.143 91 39 0 6 96 58 148 1.11e-28 113
MS.gene56735.t1 AT2G31180 47.500 120 49 2 6 114 49 165 1.13e-28 110
MS.gene56735.t1 AT2G36890 61.538 78 30 0 6 83 50 127 2.62e-28 110
MS.gene56735.t1 AT5G65790 66.667 69 23 0 6 74 50 118 3.17e-28 112
MS.gene56735.t1 AT2G47460 50.962 104 49 1 6 109 49 150 3.92e-28 112
MS.gene56735.t1 AT2G36890 61.538 78 30 0 6 83 91 168 4.69e-28 111
MS.gene56735.t1 AT1G22640 58.667 75 31 0 16 90 2 76 8.15e-28 107
MS.gene56735.t1 AT1G06180 64.706 68 24 0 6 73 49 116 1.26e-27 107
MS.gene56735.t1 AT5G40330 50.000 112 54 2 6 117 49 158 2.07e-27 106
MS.gene56735.t1 AT3G27920 66.667 69 23 0 6 74 51 119 3.36e-27 106
MS.gene56735.t1 AT1G71030 55.844 77 34 0 8 84 5 81 3.89e-27 104
MS.gene56735.t1 AT5G52600 56.180 89 30 1 7 86 50 138 4.56e-27 105
MS.gene56735.t1 AT1G25340 54.118 85 39 0 7 91 51 135 4.89e-27 107
MS.gene56735.t1 AT1G25340 53.488 86 40 0 6 91 55 140 5.62e-27 107
MS.gene56735.t1 AT1G71030 55.844 77 34 0 8 84 19 95 5.98e-27 104
MS.gene56735.t1 AT1G25340 54.118 85 39 0 7 91 51 135 1.03e-26 107
MS.gene56735.t1 AT3G23250 63.235 68 25 0 6 73 49 116 1.07e-26 106
MS.gene56735.t1 AT4G26930 60.274 73 28 1 6 78 56 127 1.08e-26 108
MS.gene56735.t1 AT5G35550 64.286 70 25 0 6 75 54 123 1.18e-26 105
MS.gene56735.t1 AT5G35550 64.286 70 25 0 6 75 51 120 1.67e-26 105
MS.gene56735.t1 AT5G40350 43.307 127 55 3 7 116 10 136 2.48e-26 102
MS.gene56735.t1 AT5G40350 42.969 128 56 3 6 116 54 181 3.69e-26 103
MS.gene56735.t1 AT3G12820 64.286 70 25 0 6 75 3 72 4.04e-26 102
MS.gene56735.t1 AT2G32460 59.701 67 27 0 6 72 55 121 7.35e-26 107
MS.gene56735.t1 AT5G55020 60.274 73 28 1 6 78 63 134 7.40e-26 107
MS.gene56735.t1 AT2G32460 59.701 67 27 0 6 72 43 109 8.43e-26 107
MS.gene56735.t1 AT3G62610 63.235 68 25 0 6 73 49 116 8.74e-26 105
MS.gene56735.t1 AT1G79180 64.286 70 25 0 6 75 51 120 1.10e-25 103
MS.gene56735.t1 AT3G47600 61.972 71 27 0 6 76 43 113 1.53e-25 103
MS.gene56735.t1 AT4G25560 62.319 69 26 0 7 75 48 116 1.53e-25 103
MS.gene56735.t1 AT3G47600 61.972 71 27 0 6 76 49 119 1.59e-25 104
MS.gene56735.t1 AT1G16490 61.765 68 26 0 6 73 51 118 1.62e-25 102
MS.gene56735.t1 AT1G08810 62.857 70 26 0 6 75 49 118 1.64e-25 103
MS.gene56735.t1 AT1G79180 66.176 68 23 0 6 73 84 151 1.95e-25 103
MS.gene56735.t1 AT3G12820 64.286 70 25 0 6 75 51 120 2.07e-25 102
MS.gene56735.t1 AT1G74650 61.972 71 27 0 6 76 49 119 2.72e-25 103
MS.gene56735.t1 AT5G59780 62.121 66 25 0 7 72 25 90 4.82e-25 100
MS.gene56735.t1 AT3G28910 59.459 74 30 0 6 79 49 122 5.01e-25 102
MS.gene56735.t1 AT5G59780 62.121 66 25 0 7 72 46 111 5.36e-25 100
MS.gene56735.t1 AT3G46130 62.121 66 25 0 7 72 15 80 5.76e-25 100
MS.gene56735.t1 AT2G26960 48.980 98 48 2 6 103 57 152 6.16e-25 103
MS.gene56735.t1 AT3G01530 58.824 68 28 0 6 73 62 129 7.02e-25 99.8
MS.gene56735.t1 AT3G46130 62.121 66 25 0 7 72 25 90 7.95e-25 100
MS.gene56735.t1 AT4G13480 63.636 66 24 0 7 72 44 109 8.98e-25 100
MS.gene56735.t1 AT3G46130 62.121 66 25 0 7 72 47 112 9.19e-25 100
MS.gene56735.t1 AT3G27810 58.209 67 28 0 7 73 9 75 9.52e-25 98.6
MS.gene56735.t1 AT5G62470 60.563 71 28 0 6 76 48 118 1.02e-24 102
MS.gene56735.t1 AT5G62470 60.563 71 28 0 6 76 49 119 1.08e-24 102
MS.gene56735.t1 AT3G24310 63.636 66 24 0 7 72 56 121 1.14e-24 100
MS.gene56735.t1 AT5G49330 61.765 68 26 0 6 73 49 116 1.18e-24 102
MS.gene56735.t1 AT1G68320 37.126 167 84 3 7 165 57 210 1.56e-24 100
MS.gene56735.t1 AT5G06100 58.209 67 28 0 6 72 69 135 1.92e-24 102
MS.gene56735.t1 AT5G06100 58.209 67 28 0 6 72 69 135 2.55e-24 102
MS.gene56735.t1 AT5G06100 58.209 67 28 0 6 72 69 135 2.55e-24 102
MS.gene56735.t1 AT5G06100 58.209 67 28 0 6 72 69 135 2.55e-24 102
MS.gene56735.t1 AT5G06100 58.209 67 28 0 6 72 69 135 2.55e-24 102
MS.gene56735.t1 AT3G27810 57.353 68 29 0 6 73 57 124 2.87e-24 98.6
MS.gene56735.t1 AT3G11440 55.224 67 30 0 6 72 78 144 6.19e-24 101
MS.gene56735.t1 AT3G11440 55.224 67 30 0 6 72 78 144 8.18e-24 101
MS.gene56735.t1 AT3G11440 55.224 67 30 0 6 72 78 144 8.18e-24 101
MS.gene56735.t1 AT3G11440 55.224 67 30 0 6 72 78 144 8.18e-24 101
MS.gene56735.t1 AT1G56160 60.294 68 27 0 6 73 51 118 2.09e-23 97.8
MS.gene56735.t1 AT5G52260 63.768 69 25 0 7 75 50 118 3.15e-23 96.7
MS.gene56735.t1 AT1G48000 43.396 106 52 2 7 104 70 175 5.27e-23 95.5
MS.gene56735.t1 AT3G53200 60.606 66 26 0 7 72 14 79 7.60e-23 94.0
MS.gene56735.t1 AT5G14750 50.000 104 47 3 16 118 2 101 1.12e-22 92.0
MS.gene56735.t1 AT5G14750 50.000 104 47 3 16 118 2 101 1.12e-22 92.0
MS.gene56735.t1 AT3G30210 60.000 65 26 0 7 71 65 129 1.29e-22 95.1
MS.gene56735.t1 AT3G53200 60.606 66 26 0 7 72 47 112 1.93e-22 94.0
MS.gene56735.t1 AT3G48920 58.462 65 27 0 7 71 56 120 2.20e-22 94.4
MS.gene56735.t1 AT2G47190 53.425 73 34 0 7 79 58 130 6.22e-22 93.2
MS.gene56735.t1 AT1G66370 59.701 67 27 0 6 72 45 111 1.39e-21 91.7
MS.gene56735.t1 AT3G23250 60.345 58 23 0 16 73 2 59 2.54e-20 87.8
MS.gene56735.t1 AT1G66380 61.194 67 26 0 6 72 12 78 2.43e-19 82.0
MS.gene56735.t1 AT3G50060 53.030 66 31 0 7 72 41 106 4.18e-19 85.9
MS.gene56735.t1 AT2G39880 56.061 66 29 0 7 72 85 150 4.64e-19 86.7
MS.gene56735.t1 AT3G09230 33.562 146 90 3 7 147 90 233 5.88e-19 86.7
MS.gene56735.t1 AT5G61420 64.000 50 18 0 38 87 2 51 7.00e-19 85.1
MS.gene56735.t1 AT1G66380 61.194 67 26 0 6 72 45 111 8.44e-19 81.3
MS.gene56735.t1 AT4G18770 49.275 69 35 0 7 75 252 320 1.27e-18 85.9
MS.gene56735.t1 AT1G56650 44.231 104 48 1 6 109 45 138 1.36e-18 83.6
MS.gene56735.t1 AT3G27785 48.611 72 37 0 1 72 218 289 2.12e-18 85.5
MS.gene56735.t1 AT2G23290 51.515 66 32 0 7 72 48 113 5.73e-18 82.8
MS.gene56735.t1 AT2G26950 47.143 70 36 1 9 78 56 124 5.95e-18 83.6
MS.gene56735.t1 AT5G11050 48.571 70 36 0 3 72 136 205 7.27e-18 83.6
MS.gene56735.t1 AT3G55730 51.429 70 34 0 7 76 91 160 7.78e-18 83.6
MS.gene56735.t1 AT5G58850 47.143 70 37 0 3 72 136 205 1.02e-17 83.2
MS.gene56735.t1 AT3G06490 54.795 73 33 0 7 79 57 129 1.06e-17 82.4
MS.gene56735.t1 AT2G25230 41.975 81 45 1 3 81 57 137 1.24e-17 80.5
MS.gene56735.t1 AT5G49620 54.795 73 33 0 7 79 64 136 1.30e-17 82.0
MS.gene56735.t1 AT1G66390 59.701 67 27 0 6 72 45 111 1.75e-17 80.5
MS.gene56735.t1 AT4G37260 50.000 66 33 0 7 72 48 113 1.76e-17 81.6
MS.gene56735.t1 AT5G15310 66.667 51 16 1 45 94 9 59 2.01e-17 80.5
MS.gene56735.t1 AT5G40360 45.070 71 39 0 1 71 187 257 3.05e-17 81.3
MS.gene56735.t1 AT5G67300 44.944 89 45 2 7 91 41 129 5.18e-17 80.1
MS.gene56735.t1 AT4G28110 70.732 41 12 0 45 85 4 44 8.19e-17 77.8
MS.gene56735.t1 AT3G09370 51.515 66 32 0 7 72 170 235 8.74e-17 80.9
MS.gene56735.t1 AT3G09370 51.515 66 32 0 7 72 165 230 9.08e-17 80.9
MS.gene56735.t1 AT3G09370 51.515 66 32 0 7 72 178 243 1.18e-16 80.5
MS.gene56735.t1 AT3G60460 50.704 71 33 2 7 76 49 118 1.23e-16 79.0
MS.gene56735.t1 AT5G02320 50.746 67 33 0 7 73 162 228 1.64e-16 80.1
MS.gene56735.t1 AT5G02320 50.746 67 33 0 7 73 162 228 1.64e-16 80.1
MS.gene56735.t1 AT1G17950 33.333 156 69 4 7 130 40 192 2.20e-16 77.4
MS.gene56735.t1 AT5G02320 50.746 67 33 0 7 73 102 168 2.37e-16 79.3
MS.gene56735.t1 AT1G69560 47.761 67 35 0 7 73 142 208 1.12e-15 76.6
MS.gene56735.t1 AT1G69560 47.761 67 35 0 7 73 158 224 1.22e-15 76.6
MS.gene56735.t1 AT1G26780 48.485 66 34 0 7 72 133 198 1.48e-15 75.9
MS.gene56735.t1 AT1G26780 48.485 66 34 0 7 72 133 198 1.81e-15 76.3
MS.gene56735.t1 AT3G29020 46.269 67 36 0 7 73 100 166 1.93e-15 74.7
MS.gene56735.t1 AT5G59780 60.870 46 18 0 27 72 1 46 3.66e-15 72.4
MS.gene56735.t1 AT3G29020 46.269 67 36 0 7 73 102 168 4.66e-15 74.7
MS.gene56735.t1 AT3G46130 60.870 46 18 0 27 72 1 46 4.99e-15 72.4
MS.gene56735.t1 AT5G11510 46.269 67 36 0 7 73 116 182 7.60e-15 75.5
MS.gene56735.t1 AT5G11510 46.269 67 36 0 7 73 116 182 7.60e-15 75.5
MS.gene56735.t1 AT5G11510 46.269 67 36 0 7 73 116 182 7.60e-15 75.5
MS.gene56735.t1 AT5G11510 46.269 67 36 0 7 73 116 182 7.65e-15 75.5
MS.gene56735.t1 AT5G11510 46.269 67 36 0 7 73 116 182 7.96e-15 75.5
MS.gene56735.t1 AT5G40430 41.333 75 44 0 3 77 84 158 1.22e-14 72.8
MS.gene56735.t1 AT4G25560 58.333 48 20 0 28 75 3 50 1.37e-14 72.0
MS.gene56735.t1 AT1G74430 51.852 54 26 0 34 87 8 61 2.04e-14 71.2
MS.gene56735.t1 AT5G17800 35.185 108 63 2 7 113 128 229 2.21e-14 72.8
MS.gene56735.t1 AT5G49620 45.977 87 33 1 7 79 64 150 3.07e-14 72.4
MS.gene56735.t1 AT4G33450 46.970 66 35 0 7 72 54 119 4.85e-14 70.9
MS.gene56735.t1 AT4G32730 44.776 67 37 0 7 73 122 188 5.73e-14 72.8
MS.gene56735.t1 AT4G32730 44.776 67 37 0 7 73 122 188 6.45e-14 72.8
MS.gene56735.t1 AT4G32730 44.776 67 37 0 7 73 122 188 6.45e-14 72.8
MS.gene56735.t1 AT4G32730 44.776 67 37 0 7 73 122 188 6.45e-14 72.8
MS.gene56735.t1 AT4G32730 44.776 67 37 0 7 73 122 188 6.45e-14 72.8
MS.gene56735.t1 AT1G22640 56.522 46 20 0 45 90 16 61 9.61e-14 68.9
MS.gene56735.t1 AT5G14340 50.943 53 25 1 38 89 2 54 1.10e-13 68.6
MS.gene56735.t1 AT1G73410 50.000 66 33 0 7 72 41 106 3.92e-13 68.2
MS.gene56735.t1 AT1G73410 50.000 66 33 0 7 72 41 106 6.53e-13 67.0
MS.gene56735.t1 AT4G00540 43.284 67 38 0 7 73 141 207 9.00e-13 68.6
MS.gene56735.t1 AT4G00540 43.284 67 38 0 7 73 139 205 1.19e-12 68.2
MS.gene56735.t1 AT1G74650 60.465 43 17 0 34 76 1 43 7.26e-12 64.7
MS.gene56735.t1 AT3G28910 56.522 46 20 0 34 79 1 46 2.02e-11 63.5

Find 42 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTACTATTGAAATTAT+TGG 0.084089 6.2:+4979513 None:intergenic
GGCAACATTTCCAGAAATTT+TGG 0.117582 6.2:-4979341 MS.gene56735:CDS
TTCATTTGTGGATGGTATTT+TGG 0.129696 6.2:-4979383 MS.gene56735:CDS
AAGAAAGAAGCTTATGAAAA+TGG 0.185126 6.2:-4979998 MS.gene56735:CDS
AAAGAAGCATCCAAAATTTC+TGG 0.229497 6.2:+4979331 None:intergenic
TGTCAATAACACCCCAATAT+TGG 0.259810 6.2:-4979872 MS.gene56735:CDS
GAGCTGATTATTACCCTTCA+TGG 0.280333 6.2:-4981143 MS.gene56735:CDS
ACAATGATGTCAAGAATTAT+TGG 0.314255 6.2:-4980032 MS.gene56735:CDS
ACATCATTGTCTGTTCTTCC+AGG 0.314381 6.2:+4980045 None:intergenic
GAAACTGGCTTATGAGTTAC+TGG 0.324766 6.2:+4979967 None:intergenic
ATTACCCTTCATGGAGCTAT+AGG 0.324847 6.2:-4981134 MS.gene56735:CDS
TCAGAAATCACTTGTGAAAC+TGG 0.330362 6.2:+4979952 None:intergenic
AATTCTCTTGGTTTGTGAAT+TGG 0.359504 6.2:+4979797 None:intergenic
TCCAATAATTTCAATAGTAA+TGG 0.385542 6.2:-4979514 MS.gene56735:CDS
TGTTATTGACAAAATTCATT+TGG 0.391041 6.2:+4979884 None:intergenic
ATAGGTGTGGTAAGAGTTGC+AGG 0.392561 6.2:-4981229 MS.gene56735:intron
AAATTAACTCTAACTTTGAA+TGG 0.399442 6.2:-4979663 MS.gene56735:CDS
CATGTTGTTGGAAATTCTCT+TGG 0.405895 6.2:+4979785 None:intergenic
GGACAAGGACAGTGAGATAA+GGG 0.415875 6.2:-4979362 MS.gene56735:CDS
CTTCACTTAAGACATGTTGT+TGG 0.429030 6.2:+4979773 None:intergenic
AGAAAGAAGCTTATGAAAAT+GGG 0.435037 6.2:-4979997 MS.gene56735:CDS
ATGTCATCATTGAGCCTCTC+AGG 0.445638 6.2:-4979562 MS.gene56735:CDS
TGAATTTCTGTCCACACTAA+AGG 0.451803 6.2:+4979616 None:intergenic
TCACAAGTGATTTCTGACTT+AGG 0.476952 6.2:-4979946 MS.gene56735:CDS
ATAATCAGCTCTTCTTCCTC+AGG 0.485175 6.2:+4981155 None:intergenic
AAACTATCATGCTTGAGATC+AGG 0.493104 6.2:+4981182 None:intergenic
TGGACAAGGACAGTGAGATA+AGG 0.499071 6.2:-4979363 MS.gene56735:CDS
CATCTTCTTCTAATCTCACT+AGG 0.499551 6.2:-4979729 MS.gene56735:CDS
GTGTTGCAAGAGTACGAAAT+CGG 0.514008 6.2:+4979697 None:intergenic
TTCAACAATGTGACATACAA+AGG 0.524894 6.2:-4979588 MS.gene56735:CDS
AAACAAGGTGGTTCAAGTGA+AGG 0.532114 6.2:-4979484 MS.gene56735:CDS
TGCTTCCTATAGCTCCATGA+AGG 0.532634 6.2:+4981129 None:intergenic
TCAGGGAATTCATTTGTGGA+TGG 0.549178 6.2:-4979391 MS.gene56735:CDS
TCAACAATGTGACATACAAA+GGG 0.563931 6.2:-4979587 MS.gene56735:CDS
TTCATGGAGCTATAGGAAGC+AGG 0.564282 6.2:-4981127 MS.gene56735:intron
CACTTTGCATTATACCTGAG+AGG 0.565904 6.2:+4979548 None:intergenic
GAGAGTTTGATGTTGTTGTG+AGG 0.612357 6.2:+4979911 None:intergenic
TCAGGTATAATGCAAAGTGA+AGG 0.630289 6.2:-4979544 MS.gene56735:CDS
ACAATGATGAGCCTTTAGTG+TGG 0.648778 6.2:-4979627 MS.gene56735:CDS
GCTTCCTATAGCTCCATGAA+GGG 0.674390 6.2:+4981130 None:intergenic
AGTAATGGAGATGATAAACA+AGG 0.690474 6.2:-4979499 MS.gene56735:CDS
AATGGAGATGATAAACAAGG+TGG 0.713993 6.2:-4979496 MS.gene56735:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTAAAAAATGATAAGA+AGG - chr6.2:4980994-4981013 MS.gene56735:intron 10.0%
!!! TCTTATCATTTTTTAATTTA+TGG + chr6.2:4980994-4981013 None:intergenic 10.0%
!!! TTTTTAGATGTATAAAAAAA+TGG + chr6.2:4980247-4980266 None:intergenic 10.0%
!! AAAACAATAAAATCAATGTT+TGG + chr6.2:4981204-4981223 None:intergenic 15.0%
!! TACATCAAGAAAATTAAATA+AGG + chr6.2:4980623-4980642 None:intergenic 15.0%
!!! GTTTTTTTAATTAATGTAGA+TGG - chr6.2:4981219-4981238 MS.gene56735:CDS 15.0%
!!! TGTTAAATTTTATTTAGTGT+CGG + chr6.2:4981077-4981096 None:intergenic 15.0%
!! AAAAAAATGCATAATTCACA+TGG - chr6.2:4980329-4980348 MS.gene56735:intron 20.0%
!! AAAAAATGCATAATTCACAT+GGG - chr6.2:4980330-4980349 MS.gene56735:intron 20.0%
!! AAAATACCCTTTAATAAAAC+AGG + chr6.2:4980707-4980726 None:intergenic 20.0%
!! AAATTAACTCTAACTTTGAA+TGG - chr6.2:4981645-4981664 MS.gene56735:intron 20.0%
!! ATCTCAAATCTTATATATTG+AGG - chr6.2:4979872-4979891 MS.gene56735:CDS 20.0%
!! GAAAATGAGATTTAATATCT+AGG - chr6.2:4980465-4980484 MS.gene56735:intron 20.0%
!! GTTACTGAATAATTATGTAA+TGG + chr6.2:4979554-4979573 None:intergenic 20.0%
!! TCCAATAATTTCAATAGTAA+TGG - chr6.2:4981794-4981813 MS.gene56735:intron 20.0%
!! TCCATTACTATTGAAATTAT+TGG + chr6.2:4981798-4981817 None:intergenic 20.0%
!! TGTTATTGACAAAATTCATT+TGG + chr6.2:4981427-4981446 None:intergenic 20.0%
!! TTTCAAACTATTTATGAACA+TGG + chr6.2:4979930-4979949 None:intergenic 20.0%
!!! CTATATGTTTTAGTATAACA+TGG - chr6.2:4980367-4980386 MS.gene56735:intron 20.0%
!!! TAAGAAAAGCATGTAAATTT+TGG + chr6.2:4979456-4979475 None:intergenic 20.0%
!!! TGAAAACCTGTTTTATTAAA+GGG - chr6.2:4980698-4980717 MS.gene56735:intron 20.0%
!!! TTGAAAACCTGTTTTATTAA+AGG - chr6.2:4980697-4980716 MS.gene56735:intron 20.0%
!!! TTGGAATGTGATTTTAAATT+AGG + chr6.2:4981185-4981204 None:intergenic 20.0%
!!! TTTTTACTTATAATTGAGAC+TGG + chr6.2:4980558-4980577 None:intergenic 20.0%
! AAAGTGAATAAATCGTGATA+AGG - chr6.2:4980943-4980962 MS.gene56735:intron 25.0%
! AAGAAAGAAGCTTATGAAAA+TGG - chr6.2:4981310-4981329 MS.gene56735:intron 25.0%
! ACAATGATGTCAAGAATTAT+TGG - chr6.2:4981276-4981295 MS.gene56735:intron 25.0%
! AGAAAGAAGCTTATGAAAAT+GGG - chr6.2:4981311-4981330 MS.gene56735:intron 25.0%
! ATGACATGAATCTCAAATTT+AGG - chr6.2:4981131-4981150 MS.gene56735:CDS 25.0%
! ATTATATAACACTCAGTATC+CGG + chr6.2:4980003-4980022 None:intergenic 25.0%
! GATGTATAAAAAAATGGAAC+AGG + chr6.2:4980241-4980260 None:intergenic 25.0%
! TATCGTGTGTTATATTAAGT+CGG - chr6.2:4979969-4979988 MS.gene56735:CDS 25.0%
! TTCTCTCATTCAACAAAAAT+GGG - chr6.2:4979624-4979643 MS.gene56735:CDS 25.0%
! TTTCTCTCATTCAACAAAAA+TGG - chr6.2:4979623-4979642 MS.gene56735:CDS 25.0%
!! CTATGATCTTTTATCTCAAA+AGG + chr6.2:4981162-4981181 None:intergenic 25.0%
!! GTAATGTTTAAGATATGAAG+AGG + chr6.2:4979479-4979498 None:intergenic 25.0%
!! TATTGAACTTGATTTTGCAT+TGG + chr6.2:4981488-4981507 None:intergenic 25.0%
!! TCGTGATAAGGAATTTTAAA+TGG - chr6.2:4980955-4980974 MS.gene56735:intron 25.0%
!! TGATGTCATACAAATAGTTT+TGG - chr6.2:4979358-4979377 MS.gene56735:CDS 25.0%
!!! GTAAGTTTTAAAGTAGTGAA+AGG + chr6.2:4979505-4979524 None:intergenic 25.0%
!!! TATACTTGAACTTGTTTTCA+GGG - chr6.2:4980052-4980071 MS.gene56735:CDS 25.0%
!!! TTATACTTGAACTTGTTTTC+AGG - chr6.2:4980051-4980070 MS.gene56735:CDS 25.0%
AAAACCATGTTCGTGAATAA+AGG + chr6.2:4979793-4979812 None:intergenic 30.0%
AGTTCGGTCTTAAATATAAG+AGG + chr6.2:4980854-4980873 None:intergenic 30.0%
GATAAAACCAATGTGAAAAG+AGG - chr6.2:4979663-4979682 MS.gene56735:CDS 30.0%
TCAACAATGTGACATACAAA+GGG - chr6.2:4981721-4981740 MS.gene56735:intron 30.0%
TGAAGAAGCAAATATGTACA+TGG + chr6.2:4980442-4980461 None:intergenic 30.0%
TTCAACAATGTGACATACAA+AGG - chr6.2:4981720-4981739 MS.gene56735:intron 30.0%
! AGTAATGGAGATGATAAACA+AGG - chr6.2:4981809-4981828 MS.gene56735:intron 30.0%
! CTTTTGTGTGTTCCAATATT+GGG + chr6.2:4981451-4981470 None:intergenic 30.0%
! GTGAAGCAAATTCATTTTCA+GGG - chr6.2:4981900-4981919 MS.gene56735:intron 30.0%
! TCTTTTGTGTGTTCCAATAT+TGG + chr6.2:4981452-4981471 None:intergenic 30.0%
! TGTGAAGCAAATTCATTTTC+AGG - chr6.2:4981899-4981918 MS.gene56735:intron 30.0%
! TTCATTTGTGGATGGTATTT+TGG - chr6.2:4981925-4981944 MS.gene56735:intron 30.0%
! TTTTGTGTGTTCCAATATTG+GGG + chr6.2:4981450-4981469 None:intergenic 30.0%
!! AAAGAAGCATCCAAAATTTC+TGG + chr6.2:4981980-4981999 None:intergenic 30.0%
!! AATTCTCTTGGTTTGTGAAT+TGG + chr6.2:4981514-4981533 None:intergenic 30.0%
!! ATTTTCAGGGAATTCATTTG+TGG - chr6.2:4981913-4981932 MS.gene56735:intron 30.0%
!!! ACATTGGTTTTATCACAACA+AGG + chr6.2:4979657-4979676 None:intergenic 30.0%
!!! AGTTTTAAAGTAGTGAAAGG+AGG + chr6.2:4979502-4979521 None:intergenic 30.0%
!!! GTTTTAAAGTAGTGAAAGGA+GGG + chr6.2:4979501-4979520 None:intergenic 30.0%
!!! TTTTATTTAGTGTCGGCTTA+AGG + chr6.2:4981070-4981089 None:intergenic 30.0%
AAACTATCATGCTTGAGATC+AGG + chr6.2:4980129-4980148 None:intergenic 35.0%
AAGACTACTAGCTACTAGTT+CGG + chr6.2:4980870-4980889 None:intergenic 35.0%
AATGGAGATGATAAACAAGG+TGG - chr6.2:4981812-4981831 MS.gene56735:intron 35.0%
ACATTTGTACTGTGATCAGA+TGG + chr6.2:4980500-4980519 None:intergenic 35.0%
AGGAAAAAACCTGCTTTCTT+TGG + chr6.2:4979765-4979784 None:intergenic 35.0%
ATATATTGAGGCCACATTTG+CGG - chr6.2:4979884-4979903 MS.gene56735:CDS 35.0%
ATGATAAGAAGGACTGAGTA+AGG - chr6.2:4981005-4981024 MS.gene56735:intron 35.0%
CATCTTCTTCTAATCTCACT+AGG - chr6.2:4981579-4981598 MS.gene56735:intron 35.0%
CATGTTGTTGGAAATTCTCT+TGG + chr6.2:4981526-4981545 None:intergenic 35.0%
CCAATCATGGAATTGGAAAT+TGG - chr6.2:4979730-4979749 MS.gene56735:CDS 35.0%
CCAATGTGAAAAGAGGTTTA+TGG - chr6.2:4979670-4979689 MS.gene56735:CDS 35.0%
CCAATTTCCAATTCCATGAT+TGG + chr6.2:4979733-4979752 None:intergenic 35.0%
CTCATTCAACAAAAATGGGA+AGG - chr6.2:4979628-4979647 MS.gene56735:CDS 35.0%
CTTCACTTAAGACATGTTGT+TGG + chr6.2:4981538-4981557 None:intergenic 35.0%
GATTCCTTTATTCACGAACA+TGG - chr6.2:4979786-4979805 MS.gene56735:CDS 35.0%
GCAATGTGCATTGAAATGAA+AGG + chr6.2:4979527-4979546 None:intergenic 35.0%
TATCACATTCACAACCACAT+TGG + chr6.2:4979841-4979860 None:intergenic 35.0%
TATGTAGCCAATCATGGAAT+TGG - chr6.2:4979723-4979742 MS.gene56735:CDS 35.0%
TCACAAGTGATTTCTGACTT+AGG - chr6.2:4981362-4981381 MS.gene56735:intron 35.0%
TCAGAAATCACTTGTGAAAC+TGG + chr6.2:4981359-4981378 None:intergenic 35.0%
TCAGGTATAATGCAAAGTGA+AGG - chr6.2:4981764-4981783 MS.gene56735:intron 35.0%
TGAATTTCTGTCCACACTAA+AGG + chr6.2:4981695-4981714 None:intergenic 35.0%
TGTATTGCAAAAAGACTACC+TGG - chr6.2:4981245-4981264 MS.gene56735:intron 35.0%
TGTCAATAACACCCCAATAT+TGG - chr6.2:4981436-4981455 MS.gene56735:intron 35.0%
! CCATAAACCTCTTTTCACAT+TGG + chr6.2:4979673-4979692 None:intergenic 35.0%
! GGCAACATTTCCAGAAATTT+TGG - chr6.2:4981967-4981986 MS.gene56735:intron 35.0%
! GGCTTTGACTCCTAAAATAA+GGG - chr6.2:4981029-4981048 MS.gene56735:intron 35.0%
! TCGATCGAAGATCTAAAGTT+AGG - chr6.2:4980911-4980930 MS.gene56735:intron 35.0%
! TTTAGATCTTCGATCGACTT+TGG + chr6.2:4980908-4980927 None:intergenic 35.0%
!! ACTTGTTTTCAGGGTTGAAT+AGG - chr6.2:4980061-4980080 MS.gene56735:CDS 35.0%
!! TGGCTTTGACTCCTAAAATA+AGG - chr6.2:4981028-4981047 MS.gene56735:intron 35.0%
!!! AGTATTTTAGCATCTTCCTC+AGG + chr6.2:4979699-4979718 None:intergenic 35.0%
!!! GTCAAACGAACCCTTATTTT+AGG + chr6.2:4981042-4981061 None:intergenic 35.0%
!!! TTGGTTTTATCACAACAAGG+AGG + chr6.2:4979654-4979673 None:intergenic 35.0%
AAACAAGGTGGTTCAAGTGA+AGG - chr6.2:4981824-4981843 MS.gene56735:intron 40.0%
ACAATGATGAGCCTTTAGTG+TGG - chr6.2:4981681-4981700 MS.gene56735:intron 40.0%
ACATCATTGTCTGTTCTTCC+AGG + chr6.2:4981266-4981285 None:intergenic 40.0%
ATAAGAAGGACTGAGTAAGG+TGG - chr6.2:4981008-4981027 MS.gene56735:intron 40.0%
ATAATCAGCTCTTCTTCCTC+AGG + chr6.2:4980156-4980175 None:intergenic 40.0%
ATTACCCTTCATGGAGCTAT+AGG - chr6.2:4980174-4980193 MS.gene56735:intron 40.0%
CACTTTGCATTATACCTGAG+AGG + chr6.2:4981763-4981782 None:intergenic 40.0%
CTTGCTTATGTAGCCAATCA+TGG - chr6.2:4979717-4979736 MS.gene56735:CDS 40.0%
GAACTAGTAGCTAGTAGTCT+TGG - chr6.2:4980869-4980888 MS.gene56735:intron 40.0%
GAGAGTTTGATGTTGTTGTG+AGG + chr6.2:4981400-4981419 None:intergenic 40.0%
GAGCTGATTATTACCCTTCA+TGG - chr6.2:4980165-4980184 MS.gene56735:intron 40.0%
GTTCGTGAATAAAGGAATCG+AGG + chr6.2:4979785-4979804 None:intergenic 40.0%
TATTAAGTCGGTCTTTGAGC+CGG - chr6.2:4979981-4980000 MS.gene56735:CDS 40.0%
TCAGGGAATTCATTTGTGGA+TGG - chr6.2:4981917-4981936 MS.gene56735:intron 40.0%
! GAAACTGGCTTATGAGTTAC+TGG + chr6.2:4981344-4981363 None:intergenic 40.0%
! GTGTTGCAAGAGTACGAAAT+CGG + chr6.2:4981614-4981633 None:intergenic 40.0%
! TGGTTCAAGTGAAGGTTTTG+AGG - chr6.2:4981832-4981851 MS.gene56735:intron 40.0%
!! GCATGATAGTTTTACACCTG+AGG - chr6.2:4980137-4980156 MS.gene56735:intron 40.0%
!! TGTGGATGGTATTTTGGACA+AGG - chr6.2:4981931-4981950 MS.gene56735:intron 40.0%
!! TTAGTGTCGGCTTAAGGATA+AGG + chr6.2:4981064-4981083 None:intergenic 40.0%
!! TTTTCAGGGTTGAATAGGTG+TGG - chr6.2:4980066-4980085 MS.gene56735:CDS 40.0%
AAGAGGTTTATGGACTCCTG+AGG - chr6.2:4979680-4979699 MS.gene56735:CDS 45.0%
ACAGCTGTTCCAAAGAAAGC+AGG - chr6.2:4979753-4979772 MS.gene56735:CDS 45.0%
ATAGGTGTGGTAAGAGTTGC+AGG - chr6.2:4980079-4980098 MS.gene56735:intron 45.0%
ATGTCATCATTGAGCCTCTC+AGG - chr6.2:4981746-4981765 MS.gene56735:intron 45.0%
GCAGTATAATGCGACCAATG+TGG - chr6.2:4979824-4979843 MS.gene56735:CDS 45.0%
GCTTCCTATAGCTCCATGAA+GGG + chr6.2:4980181-4980200 None:intergenic 45.0%
GGACAAGGACAGTGAGATAA+GGG - chr6.2:4981946-4981965 MS.gene56735:intron 45.0%
TGCTTCCTATAGCTCCATGA+AGG + chr6.2:4980182-4980201 None:intergenic 45.0%
TGGACAAGGACAGTGAGATA+AGG - chr6.2:4981945-4981964 MS.gene56735:intron 45.0%
TTCATGGAGCTATAGGAAGC+AGG - chr6.2:4980181-4980200 MS.gene56735:intron 45.0%
!! AAAAAATTAAATAAAAAGAA+AGG + chr6.2:4980677-4980696 None:intergenic 5.0%
!! AAAAATTAAATAAAAAGAAA+GGG + chr6.2:4980676-4980695 None:intergenic 5.0%
GCAGTCTGCAACCGCAAATG+TGG + chr6.2:4979898-4979917 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 4979321 4982009 4979321 ID=MS.gene56735
chr6.2 mRNA 4979321 4982009 4979321 ID=MS.gene56735.t1;Parent=MS.gene56735
chr6.2 exon 4981996 4982009 4981996 ID=MS.gene56735.t1.exon1;Parent=MS.gene56735.t1
chr6.2 CDS 4981996 4982009 4981996 ID=cds.MS.gene56735.t1;Parent=MS.gene56735.t1
chr6.2 exon 4981128 4981247 4981128 ID=MS.gene56735.t1.exon2;Parent=MS.gene56735.t1
chr6.2 CDS 4981128 4981247 4981128 ID=cds.MS.gene56735.t1;Parent=MS.gene56735.t1
chr6.2 exon 4979321 4980092 4979321 ID=MS.gene56735.t1.exon3;Parent=MS.gene56735.t1
chr6.2 CDS 4979321 4980092 4979321 ID=cds.MS.gene56735.t1;Parent=MS.gene56735.t1
Gene Sequence

>MS.gene56735

ATGAATGAATGTATGTAAGGCACTTGCATTATGATTCTGATGTCATACAAATAGTTTTGGTTTTTAATTTTGTTAACAAAATAAAGATGATCATATATATATATAAAATCATGCAATAGTTGTTATATAGATCCAAAATTTACATGCTTTTCTTACCTCTTCATATCTTAAACATTACCCTCCTTTCACTACTTTAAAACTTACCTTTCATTTCAATGCACATTGCATCACCATTACATAATTATTCAGTAACTCTTTCTTCTCACATTATTCATCTTTGCACTTTTTTTCTTTGTCTAAATTTTCTCTCATTCAACAAAAATGGGAAGGCCTCCTTGTTGTGATAAAACCAATGTGAAAAGAGGTTTATGGACTCCTGAGGAAGATGCTAAAATACTTGCTTATGTAGCCAATCATGGAATTGGAAATTGGACAGCTGTTCCAAAGAAAGCAGGTTTTTTCCTCGATTCCTTTATTCACGAACATGGTTTTAAATTGTAGTTGCAGTATAATGCGACCAATGTGGTTGTGAATGTGATACTGCTGCAAAGATCTCAAATCTTATATATTGAGGCCACATTTGCGGTTGCAGACTGCAATTTAAAACCATGTTCATAAATAGTTTGAAATGACAATCAGTATACGTAATATCGTGTGTTATATTAAGTCGGTCTTTGAGCCGGATACTGAGTGTTATATAATTCAAGTTTTTTTTTTTTTTTTTTTTTTTTTATACTTGAACTTGTTTTCAGGGTTGAATAGGTGTGGTAAGAGTTGCAGGCTAAGATATACAAATTATCTAAGACCTGATCTCAAGCATGATAGTTTTACACCTGAGGAAGAAGAGCTGATTATTACCCTTCATGGAGCTATAGGAAGCAGGTATATTCAAATATTCAAGTGTTCATGTTCTTGTTCCTGTTCCATTTTTTTATACATCTAAAAAAAATTGTGTAGACTATAGAATCAGTGTAATGTATGACACAAATAAAAATGTGACACTAACTAAAAAAAATGCATAATTCACATGGGCTTTAGAGTAAGATCTATATGTTTTAGTATAACATGGTTAATGTACAATAATCATACATCATATTTGTATGTTCTAACTACATTTTCCATGTACATATTTGCTTCTTCATTTGAAAATGAGATTTAATATCTAGGCTTCTATAGCCATCTGATCACAGTACAAATGTGCAACTTTTTAATTCAGCGTTATGATATACTTAGTCCAGTCTCAATTATAAGTAAAAATAATTAATTAGTAATTACACACATATTAAACATAATAGTTAGCCTTATTTAATTTTCTTGATGTAATCAAAAGAATAATTGTATTTCTCAAGTTACCCTTTCTTTTTATTTAATTTTTTTTGAAAACCTGTTTTATTAAAGGGTATTTTTGAGAATAATAATATTTAATAAATTGAAATTAGTTAAATTTTGCTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTACCTCTTATATTTAAGACCGAACTAGTAGCTAGTAGTCTTGGTAAATTATTAAAACCAAAGTCGATCGAAGATCTAAAGTTAGGTGAAGTCTCAAAGTGAATAAATCGTGATAAGGAATTTTAAATGGATCAAAATGAACACCATAAATTAAAAAATGATAAGAAGGACTGAGTAAGGTGGCTTTGACTCCTAAAATAAGGGTTCGTTTGACCTTATCCTTAAGCCGACACTAAATAAAATTTAACATGACAAAACTTTATGTAGTTGTTGATATAATAGTATGACATGAATCTCAAATTTAGGATATTCCTTTTGAGATAAAAGATCATAGCCTAATTTAAAATCACATTCCAAACATTGATTTTATTGTTTTTTTAATTAATGTAGATGGTCTTGTATTGCAAAAAGACTACCTGGAAGAACAGACAATGATGTCAAGAATTATTGGAACACAAAACTAAGAAAGAAGCTTATGAAAATGGGAATTGATCCAGTAACTCATAAGCCAGTTTCACAAGTGATTTCTGACTTAGGAAACATTAGTAGCCTCACAACAACATCAAACTCTCAAAACCAAATGAATTTTGTCAATAACACCCCAATATTGGAACACACAAAAGATGAACAAGTTCAACCAATGCAAAATCAAGTTCAATATCACCAATTCACAAACCAAGAGAATTTCCAACAACATGTCTTAAGTGAAGTTGCATCTTCAAGTTCATCTTCATCTTCTTCTAATCTCACTAGGCTAAGCTCGCCGATTTCGTACTCTTGCAACACTTCACAAGCTCAAATTAACTCTAACTTTGAATGGAGTGATTTTCTTCACAATGATGAGCCTTTAGTGTGGACAGAAATTCAACAGATTCAACAATGTGACATACAAAGGGTAATGTCATCATTGAGCCTCTCAGGTATAATGCAAAGTGAAGGTGAAATTTCCAATAATTTCAATAGTAATGGAGATGATAAACAAGGTGGTTCAAGTGAAGGTTTTGAGGATGTTGCTTGTGTTGCAAGCAAAGAATGTCAAGTTGATAAGAAATGTGAAGCAAATTCATTTTCAGGGAATTCATTTGTGGATGGTATTTTGGACAAGGACAGTGAGATAAGGGCAACATTTCCAGAAATTTTGGATGCTTCTTTTGATTATTAA
Protein sequence

>MS.gene56735.t1

MNECMCGKSCRLRYTNYLRPDLKHDSFTPEEEELIITLHGAIGSRWSCIAKRLPGRTDNDVKNYWNTKLRKKLMKMGIDPVTHKPVSQVISDLGNISSLTTTSNSQNQMNFVNNTPILEHTKDEQVQPMQNQVQYHQFTNQENFQQHVLSEVASSSSSSSSSNLTRLSSPISYSCNTSQAQINSNFEWSDFLHNDEPLVWTEIQQIQQCDIQRVMSSLSLSGIMQSEGEISNNFNSNGDDKQGGSSEGFEDVACVASKECQVDKKCEANSFSGNSFVDGILDKDSEIRATFPEILDASFDY