AlfalfaGEDB | MS.gene56846

M. sativa cultivar XinJiangDaYe / MS.gene56846

KEGG: -
GO: -
PFAM: PF03195.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56846.t1	XP_013457768.1	96.3	188	7	0	1	188	1	188	5.50E-97	363.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56846.t1	Q9FML4	68.3	180	45	3	1	171	1	177	6.6e-59	228.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56846.t1	A0A072UPP1	96.3	188	7	0	1	188	1	188	3.9e-97	363.6

TFs/TRs:

Gene ID	Type	Classification
MS.gene56846.t1	TF	LOB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56846.t1	MTR_4g105170	96.809	188	6	0	1	188	1	188	1.57e-137	382
MS.gene56846.t1	MTR_3g077240	72.881	177	46	2	3	178	2	177	1.04e-85	251
MS.gene56846.t1	MTR_7g033800	62.366	186	55	3	1	186	1	171	6.68e-73	218
MS.gene56846.t1	MTR_6g005070	82.301	113	18	1	1	113	1	111	2.86e-65	197
MS.gene56846.t1	MTR_6g005080	79.130	115	22	1	1	115	2	114	8.49e-64	193
MS.gene56846.t1	MTR_8g040900	66.917	133	40	1	1	133	1	129	1.26e-53	171
MS.gene56846.t1	MTR_5g083230	64.957	117	38	1	9	122	4	120	1.76e-50	160
MS.gene56846.t1	MTR_3g073690	64.754	122	43	0	5	126	3	124	1.88e-50	162
MS.gene56846.t1	MTR_5g017950	69.091	110	34	0	5	114	2	111	4.59e-50	164
MS.gene56846.t1	MTR_3g452660	65.179	112	39	0	6	117	2	113	4.66e-48	158
MS.gene56846.t1	MTR_4g083680	65.385	104	36	0	10	113	14	117	3.47e-47	152
MS.gene56846.t1	MTR_3g031660	64.423	104	37	0	9	112	5	108	8.14e-47	151
MS.gene56846.t1	MTR_2g068760	62.617	107	40	0	10	116	12	118	8.77e-47	151
MS.gene56846.t1	MTR_5g083010	53.383	133	62	0	9	141	9	141	5.83e-46	149
MS.gene56846.t1	MTR_3g071590	66.019	103	35	0	10	112	7	109	7.41e-46	148
MS.gene56846.t1	MTR_5g083960	62.385	109	41	0	10	118	38	146	7.17e-45	147
MS.gene56846.t1	MTR_3g094690	61.468	109	42	0	10	118	46	154	1.73e-44	147
MS.gene56846.t1	MTR_3g071420	63.000	100	37	0	9	108	12	111	2.35e-42	140
MS.gene56846.t1	MTR_2g093310	57.009	107	46	0	10	116	32	138	3.38e-42	140
MS.gene56846.t1	MTR_3g094690	60.550	109	42	1	10	118	46	153	6.23e-42	141
MS.gene56846.t1	MTR_5g075020	58.015	131	54	1	10	140	42	171	6.27e-40	135
MS.gene56846.t1	MTR_4g060950	53.448	116	53	1	2	116	15	130	7.62e-40	134
MS.gene56846.t1	MTR_5g075020	58.015	131	54	1	10	140	46	175	1.25e-39	135
MS.gene56846.t1	MTR_7g096530	59.130	115	43	2	1	111	1	115	4.07e-39	133
MS.gene56846.t1	MTR_1g095850	58.416	101	42	0	12	112	73	173	1.59e-38	132
MS.gene56846.t1	MTR_8g036085	57.944	107	44	1	11	116	23	129	1.78e-38	132
MS.gene56846.t1	MTR_8g036105	54.918	122	52	2	11	131	18	137	4.99e-36	125
MS.gene56846.t1	MTR_1g070220	62.105	95	35	1	11	104	15	109	9.51e-36	124
MS.gene56846.t1	MTR_7g028905	51.376	109	53	0	10	118	4	112	1.08e-35	121
MS.gene56846.t1	MTR_7g074990	62.105	95	35	1	11	104	20	114	1.40e-35	124
MS.gene56846.t1	MTR_6g027710	51.852	108	51	1	10	116	39	146	4.85e-34	120
MS.gene56846.t1	MTR_1g070205	37.572	173	98	3	11	177	12	180	4.86e-34	120
MS.gene56846.t1	MTR_5g080470	52.475	101	47	1	6	105	2	102	5.57e-33	117
MS.gene56846.t1	MTR_8g079660	48.077	104	54	0	11	114	8	111	8.78e-33	118
MS.gene56846.t1	MTR_7g096610	58.333	96	39	1	10	104	7	102	1.38e-32	116
MS.gene56846.t1	MTR_5g093010	48.598	107	55	0	12	118	6	112	5.56e-32	112
MS.gene56846.t1	MTR_7g075230	44.643	168	73	7	11	171	12	166	9.28e-32	114
MS.gene56846.t1	MTR_8g079620	48.077	104	54	0	11	114	8	111	9.44e-31	112
MS.gene56846.t1	MTR_4g107450	48.958	96	49	0	12	107	11	106	5.54e-29	109
MS.gene56846.t1	MTR_8g079580	46.667	105	55	1	11	114	8	112	2.34e-28	105
MS.gene56846.t1	MTR_6g011200	44.898	98	53	1	9	105	7	104	8.01e-28	105
MS.gene56846.t1	MTR_6g027700	48.421	95	48	1	11	104	7	101	1.33e-27	103
MS.gene56846.t1	MTR_8g017090	43.000	100	57	0	12	111	13	112	1.35e-25	100
MS.gene56846.t1	MTR_6g011230	36.220	127	72	2	12	130	12	137	1.37e-24	95.5
MS.gene56846.t1	MTR_6g011250	49.398	83	41	1	9	90	7	89	2.34e-24	94.4
MS.gene56846.t1	MTR_4g099230	40.385	104	60	2	12	114	3	105	1.12e-23	92.0
MS.gene56846.t1	MTR_2g100020	43.011	93	53	0	12	104	20	112	2.79e-23	94.0
MS.gene56846.t1	MTR_5g085390	40.187	107	62	2	9	114	7	112	1.82e-20	85.5
MS.gene56846.t1	MTR_4g088035	35.556	90	58	0	10	99	5	94	5.98e-17	76.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56846.t1	AT5G63090	68.333	180	45	3	1	171	1	177	1.39e-78	233
MS.gene56846.t1	AT5G63090	68.333	180	45	3	1	171	1	177	1.39e-78	233
MS.gene56846.t1	AT5G63090	68.333	180	45	3	1	171	1	177	1.39e-78	233
MS.gene56846.t1	AT5G63090	68.333	180	45	3	1	171	1	177	1.39e-78	233
MS.gene56846.t1	AT3G27650	78.182	110	24	0	5	114	33	142	2.67e-62	190
MS.gene56846.t1	AT1G65620	68.217	129	39	1	1	129	1	127	1.43e-52	167
MS.gene56846.t1	AT1G65620	68.217	129	39	1	1	129	1	127	1.43e-52	167
MS.gene56846.t1	AT1G65620	68.217	129	39	1	1	129	1	127	1.43e-52	167
MS.gene56846.t1	AT1G65620	68.217	129	39	1	1	129	1	127	1.43e-52	167
MS.gene56846.t1	AT1G65620	68.217	129	39	1	1	129	1	127	1.43e-52	167
MS.gene56846.t1	AT5G66870	60.839	143	45	3	1	142	1	133	7.31e-51	166
MS.gene56846.t1	AT2G23660	62.931	116	43	0	9	124	3	118	2.95e-49	162
MS.gene56846.t1	AT2G23660	62.931	116	43	0	9	124	3	118	2.95e-49	162
MS.gene56846.t1	AT2G23660	62.931	116	43	0	9	124	3	118	2.95e-49	162
MS.gene56846.t1	AT2G30130	64.286	112	40	0	9	120	6	117	3.44e-49	158
MS.gene56846.t1	AT1G31320	72.727	88	24	0	10	97	12	99	3.07e-44	145
MS.gene56846.t1	AT1G16530	59.829	117	45	2	10	124	13	129	1.36e-43	143
MS.gene56846.t1	AT1G07900	61.165	103	40	0	10	112	32	134	4.59e-43	142
MS.gene56846.t1	AT2G30340	60.952	105	41	0	10	114	52	156	1.13e-42	144
MS.gene56846.t1	AT2G30340	60.952	105	41	0	10	114	51	155	1.21e-42	144
MS.gene56846.t1	AT2G28500	58.879	107	44	0	10	116	54	160	2.07e-41	139
MS.gene56846.t1	AT3G11090	57.944	107	45	0	9	115	9	115	4.56e-41	136
MS.gene56846.t1	AT2G40470	63.810	105	38	0	10	114	19	123	8.49e-39	132
MS.gene56846.t1	AT2G40470	63.810	105	38	0	10	114	44	148	1.70e-38	132
MS.gene56846.t1	AT3G26660	55.000	100	45	0	12	111	6	105	8.73e-38	127
MS.gene56846.t1	AT3G26620	55.000	100	45	0	12	111	6	105	9.43e-38	127
MS.gene56846.t1	AT3G03760	56.731	104	44	1	10	112	50	153	1.85e-37	130
MS.gene56846.t1	AT4G00210	54.472	123	53	2	1	122	1	121	2.81e-37	129
MS.gene56846.t1	AT2G45420	63.043	92	33	1	14	104	40	131	1.32e-35	125
MS.gene56846.t1	AT4G00220	57.692	104	43	1	14	116	20	123	2.00e-35	124
MS.gene56846.t1	AT2G31310	38.503	187	84	5	10	170	6	187	5.22e-35	122
MS.gene56846.t1	AT2G42430	55.963	109	43	2	1	104	1	109	1.84e-34	122
MS.gene56846.t1	AT3G50510	45.902	122	64	1	10	129	11	132	9.62e-34	119
MS.gene56846.t1	AT3G50510	45.902	122	64	1	10	129	11	132	9.62e-34	119
MS.gene56846.t1	AT3G58190	56.250	96	41	1	11	105	11	106	3.18e-33	118
MS.gene56846.t1	AT2G45410	61.957	92	34	1	14	104	19	110	4.38e-33	117
MS.gene56846.t1	AT2G42440	53.608	97	44	1	10	105	6	102	2.00e-32	117
MS.gene56846.t1	AT5G06080	47.368	114	59	1	6	118	2	115	3.44e-32	114
MS.gene56846.t1	AT5G35900	49.000	100	51	0	12	111	6	105	1.07e-30	111
MS.gene56846.t1	AT3G13850	45.745	94	51	0	12	105	37	130	5.50e-28	105
MS.gene56846.t1	AT3G47870	41.748	103	60	0	12	114	37	139	4.49e-25	99.8
MS.gene56846.t1	AT1G72980	41.905	105	61	0	1	105	3	107	9.54e-24	93.6
MS.gene56846.t1	AT4G22700	39.640	111	65	2	12	121	6	115	5.56e-21	85.9
MS.gene56846.t1	AT1G06280	44.156	77	43	0	12	88	25	101	7.63e-18	78.2
MS.gene56846.t1	AT2G19820	34.694	98	63	1	2	98	3	100	2.57e-15	69.3
MS.gene56846.t1	AT5G15060	38.272	81	48	1	4	82	10	90	4.87e-15	68.9
MS.gene56846.t1	AT3G27940	38.806	67	41	0	10	76	4	70	1.04e-11	60.5
MS.gene56846.t1	AT3G27940	38.806	67	41	0	10	76	4	70	1.04e-11	60.5
MS.gene56846.t1	AT3G27940	38.806	67	41	0	10	76	4	70	1.04e-11	60.5

Find 54 sgRNAs with CRISPR-Local

Find 59 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCAAACGTACACAAAATATT+TGG	0.186655	8.1:+17247300	MS.gene56846:CDS
CTAAACTGTCTTTGTGGAAT+TGG	0.275981	8.1:-17247591	None:intergenic
CGAGTTAGGGATCCAGTTTA+TGG	0.289758	8.1:+17247411	MS.gene56846:CDS
AGAGAGGCTGGAGGAGGTGG+AGG	0.297872	8.1:-17247537	None:intergenic
ACGAAGCCGAAGCACGAGTT+AGG	0.305462	8.1:+17247397	MS.gene56846:CDS
CTTTACCTTATTCTCTTCCT+TGG	0.333470	8.1:+17247664	MS.gene56846:CDS
ATGAGTGAAGGTGGAGGAGG+AGG	0.339514	8.1:+17247708	MS.gene56846:CDS
TCAGTCCAAGGAAGAGAATA+AGG	0.339719	8.1:-17247669	None:intergenic
AGTGAAGGTGGAGGAGGAGG+AGG	0.400300	8.1:+17247711	MS.gene56846:CDS
AAAGAAGAATAAGTAGTAGT+AGG	0.401220	8.1:-17247645	None:intergenic
GCTCCTACACATCCATAAAC+TGG	0.405024	8.1:-17247423	None:intergenic
GAAAGAGAGGCTGGAGGAGG+TGG	0.409459	8.1:-17247540	None:intergenic
CTTCCACTAAACTGTCTTTG+TGG	0.427794	8.1:-17247597	None:intergenic
GGCTCTTCTGGAGGGAAGTA+AGG	0.432439	8.1:-17247267	None:intergenic
TGGAGGAGGTGGAGGGATAT+CGG	0.435988	8.1:-17247529	None:intergenic
AGTTAACTGCATCCTCCCTT+TGG	0.438074	8.1:-17247365	None:intergenic
GATATGAGTGAAGGTGGAGG+AGG	0.442790	8.1:+17247705	MS.gene56846:CDS
ATTCCACAAAGACAGTTTAG+TGG	0.446210	8.1:+17247594	MS.gene56846:CDS
TGGATCCCTAACTCGTGCTT+CGG	0.456667	8.1:-17247403	None:intergenic
CAGTTTAGTGGAAGAAATGA+AGG	0.473637	8.1:+17247606	MS.gene56846:CDS
TGAGGCACAGAAAGAGAGGC+TGG	0.482119	8.1:-17247549	None:intergenic
ACTGTCTTTGTGGAATTGGT+TGG	0.483148	8.1:-17247587	None:intergenic
TTGAGGAGAAAATGCATGCC+AGG	0.496470	8.1:+17247231	MS.gene56846:CDS
ACAAGTTCAAAGGCTTCAAA+AGG	0.500774	8.1:+17247464	MS.gene56846:CDS
CTGCATCCTCCCTTTGGTGA+GGG	0.501198	8.1:-17247359	None:intergenic
GCCTCTCTTTCTGTGCCTCA+AGG	0.505853	8.1:+17247552	MS.gene56846:CDS
CGAAGCCGAAGCACGAGTTA+GGG	0.512333	8.1:+17247398	MS.gene56846:CDS
GAGAGGCTGGAGGAGGTGGA+GGG	0.516068	8.1:-17247536	None:intergenic
CATCCTCCCTTTGGTGAGGG+AGG	0.527585	8.1:-17247356	None:intergenic
TTCTACAAAGACAAGTTCAA+AGG	0.528529	8.1:+17247454	MS.gene56846:CDS
GAGGTGGAGGGATATCGGTG+AGG	0.544709	8.1:-17247524	None:intergenic
AGGTGGAGGGATATCGGTGA+GGG	0.546572	8.1:-17247523	None:intergenic
GTGCTGCCTGCAAATTCTTG+AGG	0.549706	8.1:+17247214	MS.gene56846:CDS
ACAGAAAGAGAGGCTGGAGG+AGG	0.555018	8.1:-17247543	None:intergenic
CGAACTCCTCCCTCACCAAA+GGG	0.555403	8.1:+17247350	MS.gene56846:CDS
ACTGCATCCTCCCTTTGGTG+AGG	0.557366	8.1:-17247360	None:intergenic
TTGTCTTTGTAGAAAAGAGA+TGG	0.561057	8.1:-17247445	None:intergenic
GAGGGTATAGCGAAGAAGAT+CGG	0.563089	8.1:-17247505	None:intergenic
AAGAATTTGCAGGCAGCACA+AGG	0.573114	8.1:-17247210	None:intergenic
ACGAACTCCTCCCTCACCAA+AGG	0.580542	8.1:+17247349	MS.gene56846:CDS
GATCCAGTTTATGGATGTGT+AGG	0.582057	8.1:+17247420	MS.gene56846:CDS
TCCTTGAGGCACAGAAAGAG+AGG	0.595065	8.1:-17247553	None:intergenic
TCCTCAGTGGATATGAGTGA+AGG	0.615767	8.1:+17247696	MS.gene56846:CDS
TAAGGTGCAAAGATGCAACC+TGG	0.617157	8.1:-17247249	None:intergenic
TCAGTGGATATGAGTGAAGG+TGG	0.618537	8.1:+17247699	MS.gene56846:CDS
GTGGATATGAGTGAAGGTGG+AGG	0.633891	8.1:+17247702	MS.gene56846:CDS
ACTGAGGAAGTATCAGTCCA+AGG	0.638918	8.1:-17247681	None:intergenic
TTGGACTGATACTTCCTCAG+TGG	0.639081	8.1:+17247683	MS.gene56846:CDS
AGTTTAGTGGAAGAAATGAA+GGG	0.640159	8.1:+17247607	MS.gene56846:CDS
ACAAGGTGAATTGTATGCGC+TGG	0.642277	8.1:-17247193	None:intergenic
TGGACTGATATCATTCCTTG+AGG	0.655168	8.1:-17247567	None:intergenic
ACTCCTCCCTCACCAAAGGG+AGG	0.660217	8.1:+17247353	MS.gene56846:CDS
GGCACAGAAAGAGAGGCTGG+AGG	0.697106	8.1:-17247546	None:intergenic
ACCTTCACTCATATCCACTG+AGG	0.758906	8.1:-17247697	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AAAGAAGAATAAGTAGTAGT+AGG	-	chr8.1:17247648-17247667	None:intergenic	25.0%
	AGTTTAGTGGAAGAAATGAA+GGG	+	chr8.1:17247607-17247626	MS.gene56846:CDS	30.0%
	GCAAACGTACACAAAATATT+TGG	+	chr8.1:17247300-17247319	MS.gene56846:CDS	30.0%
	TTCTACAAAGACAAGTTCAA+AGG	+	chr8.1:17247454-17247473	MS.gene56846:CDS	30.0%
	TTGTCTTTGTAGAAAAGAGA+TGG	-	chr8.1:17247448-17247467	None:intergenic	30.0%
!	TGTACGTTTGCAAATTTTTG+AGG	-	chr8.1:17247291-17247310	None:intergenic	30.0%
	ACAAGTTCAAAGGCTTCAAA+AGG	+	chr8.1:17247464-17247483	MS.gene56846:CDS	35.0%
	ATTCCACAAAGACAGTTTAG+TGG	+	chr8.1:17247594-17247613	MS.gene56846:CDS	35.0%
	CAGTTTAGTGGAAGAAATGA+AGG	+	chr8.1:17247606-17247625	MS.gene56846:CDS	35.0%
	CTAAACTGTCTTTGTGGAAT+TGG	-	chr8.1:17247594-17247613	None:intergenic	35.0%
	CTTTACCTTATTCTCTTCCT+TGG	+	chr8.1:17247664-17247683	MS.gene56846:CDS	35.0%
!	TTTTCTCCTCAAGAATTTGC+AGG	-	chr8.1:17247223-17247242	None:intergenic	35.0%
	ACTGTCTTTGTGGAATTGGT+TGG	-	chr8.1:17247590-17247609	None:intergenic	40.0%
	CTTCCACTAAACTGTCTTTG+TGG	-	chr8.1:17247600-17247619	None:intergenic	40.0%
	GATCCAGTTTATGGATGTGT+AGG	+	chr8.1:17247420-17247439	MS.gene56846:CDS	40.0%
	TCAGTCCAAGGAAGAGAATA+AGG	-	chr8.1:17247672-17247691	None:intergenic	40.0%
	TGGACTGATATCATTCCTTG+AGG	-	chr8.1:17247570-17247589	None:intergenic	40.0%
!!!	AATTTTTGAGGCTCTTCTGG+AGG	-	chr8.1:17247279-17247298	None:intergenic	40.0%
!!!	ATTTTTGAGGCTCTTCTGGA+GGG	-	chr8.1:17247278-17247297	None:intergenic	40.0%
!!!	GCAAATTTTTGAGGCTCTTC+TGG	-	chr8.1:17247282-17247301	None:intergenic	40.0%
	AAGAATTTGCAGGCAGCACA+AGG	-	chr8.1:17247213-17247232	None:intergenic	45.0%
	ACAAGGTGAATTGTATGCGC+TGG	-	chr8.1:17247196-17247215	None:intergenic	45.0%
	ACCTTCACTCATATCCACTG+AGG	-	chr8.1:17247700-17247719	None:intergenic	45.0%
	AGTTAACTGCATCCTCCCTT+TGG	-	chr8.1:17247368-17247387	None:intergenic	45.0%
	CGAGTTAGGGATCCAGTTTA+TGG	+	chr8.1:17247411-17247430	MS.gene56846:CDS	45.0%
	GCTCCTACACATCCATAAAC+TGG	-	chr8.1:17247426-17247445	None:intergenic	45.0%
	TAAGGTGCAAAGATGCAACC+TGG	-	chr8.1:17247252-17247271	None:intergenic	45.0%
	TCAGTGGATATGAGTGAAGG+TGG	+	chr8.1:17247699-17247718	MS.gene56846:CDS	45.0%
	TCCTCAGTGGATATGAGTGA+AGG	+	chr8.1:17247696-17247715	MS.gene56846:CDS	45.0%
	TTGAGGAGAAAATGCATGCC+AGG	+	chr8.1:17247231-17247250	MS.gene56846:CDS	45.0%
	TTGGACTGATACTTCCTCAG+TGG	+	chr8.1:17247683-17247702	MS.gene56846:CDS	45.0%
!	GAGGGTATAGCGAAGAAGAT+CGG	-	chr8.1:17247508-17247527	None:intergenic	45.0%
!!	ACTGAGGAAGTATCAGTCCA+AGG	-	chr8.1:17247684-17247703	None:intergenic	45.0%
	GATATGAGTGAAGGTGGAGG+AGG	+	chr8.1:17247705-17247724	MS.gene56846:CDS	50.0%
	GTGCTGCCTGCAAATTCTTG+AGG	+	chr8.1:17247214-17247233	MS.gene56846:CDS	50.0%
	GTGGATATGAGTGAAGGTGG+AGG	+	chr8.1:17247702-17247721	MS.gene56846:CDS	50.0%
	TCCTTGAGGCACAGAAAGAG+AGG	-	chr8.1:17247556-17247575	None:intergenic	50.0%
	TGGATCCCTAACTCGTGCTT+CGG	-	chr8.1:17247406-17247425	None:intergenic	50.0%
	ACAGAAAGAGAGGCTGGAGG+AGG	-	chr8.1:17247546-17247565	None:intergenic	55.0%
	ACGAACTCCTCCCTCACCAA+AGG	+	chr8.1:17247349-17247368	MS.gene56846:CDS	55.0%
	ACGAAGCCGAAGCACGAGTT+AGG	+	chr8.1:17247397-17247416	MS.gene56846:CDS	55.0%
	ACTGCATCCTCCCTTTGGTG+AGG	-	chr8.1:17247363-17247382	None:intergenic	55.0%
	AGGTGGAGGGATATCGGTGA+GGG	-	chr8.1:17247526-17247545	None:intergenic	55.0%
	ATGAGTGAAGGTGGAGGAGG+AGG	+	chr8.1:17247708-17247727	MS.gene56846:CDS	55.0%
	CGAACTCCTCCCTCACCAAA+GGG	+	chr8.1:17247350-17247369	MS.gene56846:CDS	55.0%
	CGAAGCCGAAGCACGAGTTA+GGG	+	chr8.1:17247398-17247417	MS.gene56846:CDS	55.0%
	CTGCATCCTCCCTTTGGTGA+GGG	-	chr8.1:17247362-17247381	None:intergenic	55.0%
	GCCTCTCTTTCTGTGCCTCA+AGG	+	chr8.1:17247552-17247571	MS.gene56846:CDS	55.0%
	TGAGGCACAGAAAGAGAGGC+TGG	-	chr8.1:17247552-17247571	None:intergenic	55.0%
	TGGAGGAGGTGGAGGGATAT+CGG	-	chr8.1:17247532-17247551	None:intergenic	55.0%
!	GGCTCTTCTGGAGGGAAGTA+AGG	-	chr8.1:17247270-17247289	None:intergenic	55.0%
	ACTCCTCCCTCACCAAAGGG+AGG	+	chr8.1:17247353-17247372	MS.gene56846:CDS	60.0%
	AGTGAAGGTGGAGGAGGAGG+AGG	+	chr8.1:17247711-17247730	MS.gene56846:CDS	60.0%
	CATCCTCCCTTTGGTGAGGG+AGG	-	chr8.1:17247359-17247378	None:intergenic	60.0%
	GAAAGAGAGGCTGGAGGAGG+TGG	-	chr8.1:17247543-17247562	None:intergenic	60.0%
	GAGGTGGAGGGATATCGGTG+AGG	-	chr8.1:17247527-17247546	None:intergenic	60.0%
	GGCACAGAAAGAGAGGCTGG+AGG	-	chr8.1:17247549-17247568	None:intergenic	60.0%
	AGAGAGGCTGGAGGAGGTGG+AGG	-	chr8.1:17247540-17247559	None:intergenic	65.0%
	GAGAGGCTGGAGGAGGTGGA+GGG	-	chr8.1:17247539-17247558	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	17247180	17247746	17247180	ID=MS.gene56846
chr8.1	mRNA	17247180	17247746	17247180	ID=MS.gene56846.t1;Parent=MS.gene56846
chr8.1	exon	17247180	17247746	17247180	ID=MS.gene56846.t1.exon1;Parent=MS.gene56846.t1
chr8.1	CDS	17247180	17247746	17247180	ID=cds.MS.gene56846.t1;Parent=MS.gene56846.t1

Gene Sequence

>MS.gene56846

ATGGCATCATCATCCAGCGCATACAATTCACCTTGTGCTGCCTGCAAATTCTTGAGGAGAAAATGCATGCCAGGTTGCATCTTTGCACCTTACTTCCCTCCAGAAGAGCCTCAAAAATTTGCAAACGTACACAAAATATTTGGTGCTAGCAATGTCACAAAGCTTCTCAACGAACTCCTCCCTCACCAAAGGGAGGATGCAGTTAACTCACTTGCTTACGAAGCCGAAGCACGAGTTAGGGATCCAGTTTATGGATGTGTAGGAGCCATCTCTTTTCTACAAAGACAAGTTCAAAGGCTTCAAAAGGAACTCGACGCTGCTAACACCGATCTTCTTCGCTATACCCTCACCGATATCCCTCCACCTCCTCCAGCCTCTCTTTCTGTGCCTCAAGGAATGATATCAGTCCAACCAATTCCACAAAGACAGTTTAGTGGAAGAAATGAAGGGCTTTATAGACAATCTCCTACTACTACTTATTCTTCTTTACCTTATTCTCTTCCTTGGACTGATACTTCCTCAGTGGATATGAGTGAAGGTGGAGGAGGAGGAGGAAATCATATGTGA

Protein sequence

>MS.gene56846.t1

MASSSSAYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANTDLLRYTLTDIPPPPPASLSVPQGMISVQPIPQRQFSGRNEGLYRQSPTTTYSSLPYSLPWTDTSSVDMSEGGGGGGNHM