AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene56872

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56872.t1 MTR_4g105660 93.333 435 24 1 18 452 1 430 0.0 825
MS.gene56872.t1 MTR_3g077650 55.581 439 169 14 16 444 4 426 1.12e-149 433
MS.gene56872.t1 MTR_5g049190 51.613 279 90 6 165 442 2 236 3.01e-86 264
MS.gene56872.t1 MTR_5g070020 48.472 229 97 7 109 319 26 251 4.99e-57 192
MS.gene56872.t1 MTR_4g088015 68.504 127 40 0 195 321 219 345 1.53e-56 193
MS.gene56872.t1 MTR_3g463400 66.667 132 37 2 195 320 131 261 3.46e-56 192
MS.gene56872.t1 MTR_7g037260 67.480 123 40 0 195 317 143 265 1.52e-55 188
MS.gene56872.t1 MTR_7g451170 69.672 122 37 0 196 317 190 311 5.00e-55 189
MS.gene56872.t1 MTR_7g037130 62.602 123 46 0 195 317 143 265 7.28e-50 173
MS.gene56872.t1 MTR_7g035350 56.489 131 56 1 196 325 224 354 6.04e-45 162
MS.gene56872.t1 MTR_7g450950 50.980 153 63 3 174 324 144 286 3.36e-44 158
MS.gene56872.t1 MTR_1g057980 44.878 205 92 6 125 320 12 204 1.17e-43 155
MS.gene56872.t1 MTR_7g061330 60.526 114 45 0 195 308 111 224 3.50e-40 152
MS.gene56872.t1 MTR_7g461410 60.526 114 45 0 195 308 111 224 3.50e-40 152
MS.gene56872.t1 MTR_7g061330 60.526 114 45 0 195 308 75 188 5.34e-40 150
MS.gene56872.t1 MTR_1g026870 61.165 103 40 0 195 297 83 185 2.81e-38 148
MS.gene56872.t1 MTR_3g110028 59.223 103 42 0 195 297 83 185 1.23e-37 146
MS.gene56872.t1 MTR_4g019370 58.824 102 42 0 196 297 37 138 9.90e-36 135
MS.gene56872.t1 MTR_5g010650 58.763 97 40 0 195 291 108 204 2.70e-34 134
MS.gene56872.t1 MTR_5g016510 53.846 104 48 0 196 299 4 107 4.67e-34 130
MS.gene56872.t1 MTR_3g101290 51.961 102 49 0 196 297 36 137 1.53e-33 126
MS.gene56872.t1 MTR_4g094982 51.923 104 50 0 196 299 4 107 3.36e-33 126
MS.gene56872.t1 MTR_5g082910 53.061 98 46 0 196 293 18 115 4.68e-30 118
MS.gene56872.t1 MTR_6g015455 50.000 104 52 0 196 299 4 107 6.39e-30 124
MS.gene56872.t1 MTR_8g027345 47.826 115 57 2 192 303 9 123 3.26e-28 114
MS.gene56872.t1 MTR_4g082040 43.307 127 70 1 194 320 102 226 6.96e-28 115
MS.gene56872.t1 MTR_5g041570 40.278 144 82 2 196 339 133 272 1.27e-27 114
MS.gene56872.t1 MTR_5g029840 46.729 107 56 1 195 300 12 118 1.87e-27 112
MS.gene56872.t1 MTR_6g027340 47.525 101 53 0 197 297 16 116 2.04e-27 108
MS.gene56872.t1 MTR_1g110460 28.720 289 157 8 179 418 9 297 3.15e-27 111
MS.gene56872.t1 MTR_4g478180 51.456 103 47 2 197 297 15 116 3.41e-27 112
MS.gene56872.t1 MTR_6g027360 47.573 103 54 0 195 297 76 178 7.33e-27 110
MS.gene56872.t1 MTR_3g052450 48.571 105 52 2 195 297 40 144 8.30e-27 113
MS.gene56872.t1 MTR_4g100720 48.039 102 52 1 192 292 10 111 9.73e-27 106
MS.gene56872.t1 MTR_6g009430 46.364 110 58 1 192 300 9 118 1.39e-26 110
MS.gene56872.t1 MTR_3g089045 32.000 275 155 8 197 444 16 285 1.50e-26 108
MS.gene56872.t1 MTR_2g011660 44.737 114 62 1 185 297 3 116 1.96e-26 109
MS.gene56872.t1 MTR_3g052430 50.000 106 49 3 195 297 41 145 2.35e-26 112
MS.gene56872.t1 MTR_3g011610 50.000 106 49 3 194 296 36 140 2.97e-26 111
MS.gene56872.t1 MTR_3g461490 45.283 106 57 1 195 299 12 117 4.62e-26 108
MS.gene56872.t1 MTR_8g042410 41.860 129 70 3 188 314 30 155 4.90e-26 111
MS.gene56872.t1 MTR_4g091490 46.087 115 59 2 185 297 3 116 4.93e-26 108
MS.gene56872.t1 MTR_5g007370 47.573 103 51 2 197 297 14 115 5.00e-26 107
MS.gene56872.t1 MTR_2g089620 46.729 107 56 1 192 297 9 115 5.89e-26 108
MS.gene56872.t1 MTR_6g074860 41.985 131 74 1 194 324 1 129 7.39e-26 105
MS.gene56872.t1 MTR_0008s0390 43.478 115 62 2 185 297 3 116 7.95e-26 106
MS.gene56872.t1 MTR_8g095390 47.170 106 54 2 197 300 14 119 9.05e-26 107
MS.gene56872.t1 MTR_4g073420 49.533 107 51 2 197 301 14 119 9.41e-26 106
MS.gene56872.t1 MTR_7g117730 49.485 97 48 1 197 292 14 110 1.26e-25 105
MS.gene56872.t1 MTR_4g125520 37.423 163 89 5 197 354 14 168 1.71e-25 106
MS.gene56872.t1 MTR_3g097450 49.533 107 50 3 197 300 14 119 1.92e-25 105
MS.gene56872.t1 MTR_5g079670 47.222 108 54 2 195 300 11 117 2.11e-25 103
MS.gene56872.t1 MTR_3g077110 43.925 107 57 2 197 301 14 119 2.49e-25 106
MS.gene56872.t1 MTR_1g112760 42.857 112 61 2 192 301 10 120 2.52e-25 103
MS.gene56872.t1 MTR_7g076740 48.544 103 51 1 192 292 9 111 4.20e-25 105
MS.gene56872.t1 MTR_2g064160 46.667 105 53 2 195 297 11 114 5.22e-25 105
MS.gene56872.t1 MTR_8g020490 49.541 109 52 3 195 301 8 115 5.25e-25 103
MS.gene56872.t1 MTR_8g031360 49.515 103 50 1 192 292 10 112 6.18e-25 104
MS.gene56872.t1 MTR_0063s0090 33.491 212 124 8 192 391 9 215 6.84e-25 102
MS.gene56872.t1 MTR_4g102380 45.045 111 58 2 192 300 9 118 7.66e-25 103
MS.gene56872.t1 MTR_0251s0050 42.609 115 63 2 185 297 3 116 8.54e-25 103
MS.gene56872.t1 MTR_7g011170 44.144 111 61 1 191 300 8 118 1.18e-24 103
MS.gene56872.t1 MTR_1g045610 51.042 96 44 2 197 290 23 117 1.34e-24 102
MS.gene56872.t1 MTR_0008s0470 44.660 103 54 2 197 297 15 116 1.45e-24 103
MS.gene56872.t1 MTR_5g010020 47.475 99 51 1 195 292 12 110 1.46e-24 104
MS.gene56872.t1 MTR_2g034790 29.333 225 135 6 191 410 8 213 1.60e-24 103
MS.gene56872.t1 MTR_8g098860 43.925 107 59 1 195 300 12 118 1.76e-24 103
MS.gene56872.t1 MTR_5g078140 45.045 111 58 2 192 300 9 118 1.92e-24 103
MS.gene56872.t1 MTR_3g074520 47.573 103 51 2 197 297 14 115 2.65e-24 103
MS.gene56872.t1 MTR_1g073170 50.000 96 45 2 197 290 22 116 3.19e-24 101
MS.gene56872.t1 MTR_2g089420 34.211 190 102 6 197 382 13 183 3.83e-24 104
MS.gene56872.t1 MTR_4g121460 42.593 108 61 1 191 297 8 115 3.85e-24 103
MS.gene56872.t1 MTR_2g097910 44.118 102 56 1 197 297 22 123 3.99e-24 102
MS.gene56872.t1 MTR_5g062790 40.800 125 70 3 197 319 11 133 5.80e-24 102
MS.gene56872.t1 MTR_2g089450 43.590 117 61 3 197 311 14 127 5.90e-24 100
MS.gene56872.t1 MTR_5g088640 45.098 102 54 2 197 296 14 115 6.30e-24 101
MS.gene56872.t1 MTR_5g088080 45.098 102 54 2 197 296 14 115 6.32e-24 100
MS.gene56872.t1 MTR_5g088150 45.098 102 54 2 197 296 14 115 6.32e-24 100
MS.gene56872.t1 MTR_5g488210 45.098 102 54 2 197 296 14 115 6.32e-24 100
MS.gene56872.t1 MTR_1g076150 40.678 118 67 2 191 306 8 124 6.75e-24 100
MS.gene56872.t1 MTR_3g065440 44.144 111 59 2 192 300 9 118 7.06e-24 102
MS.gene56872.t1 MTR_8g017440 39.655 116 67 2 195 308 12 126 7.08e-24 102
MS.gene56872.t1 MTR_1g043080 46.939 98 49 2 197 292 14 110 7.59e-24 100
MS.gene56872.t1 MTR_1g100653 43.966 116 61 3 195 308 12 125 7.93e-24 101
MS.gene56872.t1 MTR_4g105130 41.509 106 61 1 197 301 14 119 8.67e-24 102
MS.gene56872.t1 MTR_5g088610 42.982 114 61 3 197 308 11 122 9.15e-24 102
MS.gene56872.t1 MTR_1g085040 44.660 103 54 2 197 297 14 115 1.06e-23 102
MS.gene56872.t1 MTR_8g006470 47.115 104 53 2 195 296 10 113 1.25e-23 100
MS.gene56872.t1 MTR_8g017540 40.650 123 67 3 195 315 58 176 1.29e-23 102
MS.gene56872.t1 MTR_5g488170 45.098 102 54 2 197 296 14 115 1.54e-23 99.4
MS.gene56872.t1 MTR_6g027370 43.137 102 58 0 196 297 98 199 1.71e-23 101
MS.gene56872.t1 MTR_7g086960 37.226 137 86 0 186 322 78 214 1.82e-23 101
MS.gene56872.t1 MTR_1g021230 45.714 105 54 2 195 297 57 160 1.86e-23 102
MS.gene56872.t1 MTR_2g095520 46.602 103 53 2 192 292 9 111 2.38e-23 100
MS.gene56872.t1 MTR_3g028740 43.925 107 59 1 192 297 19 125 2.66e-23 100
MS.gene56872.t1 MTR_2g099740 43.810 105 56 2 195 297 12 115 2.73e-23 101
MS.gene56872.t1 MTR_4g485530 43.396 106 59 1 197 301 14 119 2.86e-23 97.1
MS.gene56872.t1 MTR_1g043050 44.037 109 59 2 185 292 3 110 2.86e-23 99.0
MS.gene56872.t1 MTR_5g042030 47.059 102 53 1 197 297 9 110 3.09e-23 99.8
MS.gene56872.t1 MTR_7g035075 46.392 97 51 1 195 290 14 110 3.19e-23 97.4
MS.gene56872.t1 MTR_2g088170 51.376 109 49 3 192 297 26 133 4.31e-23 101
MS.gene56872.t1 MTR_7g111290 47.423 97 48 2 197 291 14 109 5.41e-23 100
MS.gene56872.t1 MTR_4g065017 44.118 102 56 1 197 297 19 120 5.63e-23 99.8
MS.gene56872.t1 MTR_4g057635 43.519 108 59 2 192 297 9 116 5.94e-23 99.4
MS.gene56872.t1 MTR_1g085640 38.739 111 67 1 192 301 9 119 7.78e-23 100
MS.gene56872.t1 MTR_4g063100 44.340 106 56 2 194 297 6 110 8.86e-23 97.4
MS.gene56872.t1 MTR_1g017140 38.346 133 73 3 192 315 9 141 9.59e-23 99.4
MS.gene56872.t1 MTR_4g029540 45.192 104 55 2 195 296 10 113 9.99e-23 98.2
MS.gene56872.t1 MTR_0140s0030 43.243 111 62 1 191 300 9 119 1.00e-22 99.0
MS.gene56872.t1 MTR_0489s0020 43.243 111 62 1 191 300 9 119 1.00e-22 99.0
MS.gene56872.t1 MTR_7g110830 40.566 106 62 1 197 301 14 119 1.09e-22 99.4
MS.gene56872.t1 MTR_6g090405 41.284 109 62 2 192 298 9 117 1.16e-22 97.1
MS.gene56872.t1 MTR_5g079290 40.367 109 64 1 195 302 17 125 1.49e-22 97.1
MS.gene56872.t1 MTR_7g096930 45.545 101 54 1 191 290 8 108 1.56e-22 97.4
MS.gene56872.t1 MTR_1g017000 40.000 105 61 2 195 297 12 116 2.25e-22 96.3
MS.gene56872.t1 MTR_3g103570 43.519 108 59 2 192 297 9 116 2.47e-22 98.2
MS.gene56872.t1 MTR_3g083540 41.176 102 59 1 192 292 38 139 2.85e-22 97.1
MS.gene56872.t1 MTR_5g014990 43.519 108 59 2 192 297 9 116 3.01e-22 97.1
MS.gene56872.t1 MTR_6g006030 46.939 98 49 2 195 290 14 110 3.02e-22 94.7
MS.gene56872.t1 MTR_7g010210 42.056 107 61 1 195 300 12 118 3.20e-22 97.4
MS.gene56872.t1 MTR_1g086530 39.695 131 74 3 194 320 32 161 3.82e-22 96.3
MS.gene56872.t1 MTR_8g017500 40.000 115 66 2 185 297 2 115 4.00e-22 97.4
MS.gene56872.t1 MTR_7g115650 40.952 105 61 1 197 300 14 118 4.77e-22 94.4
MS.gene56872.t1 MTR_4g082290 41.441 111 64 1 191 300 8 118 4.81e-22 98.2
MS.gene56872.t1 MTR_4g097570 43.689 103 55 2 192 291 9 111 4.88e-22 96.3
MS.gene56872.t1 MTR_7g010210 42.056 107 61 1 195 300 12 118 5.74e-22 95.5
MS.gene56872.t1 MTR_8g017340 44.340 106 55 3 195 297 12 116 6.49e-22 98.6
MS.gene56872.t1 MTR_1g062940 40.000 140 67 5 197 334 8 132 6.60e-22 94.0
MS.gene56872.t1 MTR_4g082230 41.964 112 62 2 191 300 8 118 8.79e-22 97.4
MS.gene56872.t1 MTR_0197s0010 47.368 95 47 2 200 292 6 99 1.23e-21 93.6
MS.gene56872.t1 MTR_6g012180 44.444 99 54 1 195 292 12 110 1.26e-21 95.5
MS.gene56872.t1 MTR_6g012690 41.818 110 63 1 192 300 9 118 1.46e-21 95.9
MS.gene56872.t1 MTR_0001s0360 39.450 109 65 1 195 302 7 115 1.57e-21 94.0
MS.gene56872.t1 MTR_3g039990 41.441 111 64 1 191 300 9 119 1.60e-21 95.1
MS.gene56872.t1 MTR_6g055910 28.102 274 169 7 197 451 16 280 1.80e-21 94.4
MS.gene56872.t1 MTR_4g128670 45.631 103 54 2 192 292 9 111 2.02e-21 95.5
MS.gene56872.t1 MTR_7g102110 41.667 108 61 2 192 297 9 116 2.64e-21 93.6
MS.gene56872.t1 MTR_5g078910 41.176 102 59 1 197 297 9 110 2.68e-21 94.4
MS.gene56872.t1 MTR_8g017390 42.308 104 56 3 197 297 14 116 2.95e-21 96.3
MS.gene56872.t1 MTR_5g079220 38.333 120 72 2 184 301 9 128 3.06e-21 93.6
MS.gene56872.t1 MTR_8g017350 42.727 110 59 3 191 297 8 116 3.12e-21 97.1
MS.gene56872.t1 MTR_1g008970 60.811 74 28 1 220 292 113 186 3.17e-21 93.2
MS.gene56872.t1 MTR_5g038910 41.593 113 61 2 188 298 20 129 3.63e-21 96.3
MS.gene56872.t1 MTR_1g086510 38.129 139 82 3 192 327 18 155 3.63e-21 93.2
MS.gene56872.t1 MTR_4g097570 43.137 102 56 2 192 291 9 110 4.15e-21 93.6
MS.gene56872.t1 MTR_5g079120 40.870 115 65 2 185 297 51 164 5.29e-21 93.6
MS.gene56872.t1 MTR_5g038910 41.593 113 61 2 188 298 20 129 5.92e-21 94.7
MS.gene56872.t1 MTR_7g087130 41.441 111 64 1 191 300 8 118 6.91e-21 93.6
MS.gene56872.t1 MTR_0247s0040 41.176 102 59 1 195 295 7 108 7.15e-21 90.1
MS.gene56872.t1 MTR_1g083630 43.137 102 57 1 197 297 14 115 7.27e-21 95.9
MS.gene56872.t1 MTR_1g100667 40.952 105 61 1 197 300 15 119 7.37e-21 92.4
MS.gene56872.t1 MTR_7g017260 31.500 200 101 6 195 376 25 206 7.76e-21 92.4
MS.gene56872.t1 MTR_5g078860 36.478 159 96 4 197 353 9 164 8.54e-21 92.8
MS.gene56872.t1 MTR_5g078800 35.256 156 97 3 197 350 9 162 1.02e-20 92.0
MS.gene56872.t1 MTR_5g078950 39.216 102 61 1 195 295 7 108 1.07e-20 91.7
MS.gene56872.t1 MTR_0008s0280 42.268 97 55 1 197 292 14 110 1.34e-20 90.9
MS.gene56872.t1 MTR_2g096380 41.905 105 58 2 195 297 6 109 2.02e-20 90.5
MS.gene56872.t1 MTR_8g468380 40.816 98 58 0 200 297 25 122 2.17e-20 93.6
MS.gene56872.t1 MTR_2g067420 42.157 102 58 1 192 292 11 112 1.76e-19 89.4
MS.gene56872.t1 MTR_2g033170 39.815 108 64 1 197 303 26 133 1.90e-19 89.4
MS.gene56872.t1 MTR_8g060940 40.206 97 57 1 195 290 7 103 2.76e-19 87.4
MS.gene56872.t1 MTR_0193s0090 38.835 103 62 1 195 296 7 109 3.45e-19 86.3
MS.gene56872.t1 MTR_5g078930 42.857 98 53 2 197 292 11 107 4.34e-19 86.3
MS.gene56872.t1 MTR_7g109320 36.686 169 104 3 191 356 8 176 5.44e-19 88.6
MS.gene56872.t1 MTR_3g045430 33.333 117 77 1 185 300 3 119 1.41e-18 86.3
MS.gene56872.t1 MTR_4g123040 44.211 95 52 1 197 290 26 120 1.58e-18 86.7
MS.gene56872.t1 MTR_1g085880 37.903 124 71 4 200 321 17 136 4.01e-18 82.8
MS.gene56872.t1 MTR_4g128190 40.777 103 48 3 195 296 11 101 4.05e-18 84.0
MS.gene56872.t1 MTR_7g061550 40.196 102 58 1 199 297 9 110 1.22e-17 84.3
MS.gene56872.t1 MTR_1g085770 37.903 124 71 4 200 321 17 136 1.83e-17 83.2
MS.gene56872.t1 MTR_7g111290 51.613 62 30 0 230 291 6 67 4.20e-17 82.8
MS.gene56872.t1 MTR_4g063100 44.156 77 42 1 221 297 6 81 7.05e-17 79.7
MS.gene56872.t1 MTR_7g035300 38.835 103 51 3 199 301 78 168 3.66e-16 78.2
MS.gene56872.t1 MTR_6g055910 44.118 68 38 0 230 297 21 88 9.24e-16 77.4
MS.gene56872.t1 MTR_2g096380 42.647 68 39 0 230 297 23 90 5.69e-15 74.3
MS.gene56872.t1 MTR_6g080360 42.157 102 56 2 191 290 522 622 2.68e-14 75.9
MS.gene56872.t1 MTR_6g080360 36.458 96 60 1 195 290 477 571 6.87e-12 68.2
MS.gene56872.t1 MTR_6g080360 42.157 102 56 2 191 290 302 402 5.09e-14 74.7
MS.gene56872.t1 MTR_6g080360 36.458 96 60 1 195 290 257 351 1.37e-11 67.4
MS.gene56872.t1 MTR_5g007300 40.000 80 47 1 192 270 61 140 6.25e-14 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56872.t1 AT4G18770 53.455 275 105 8 143 404 157 421 1.18e-87 274
MS.gene56872.t1 AT3G27785 64.626 147 48 1 184 326 176 322 3.68e-59 200
MS.gene56872.t1 AT5G40360 56.774 155 64 2 190 342 151 304 2.48e-53 182
MS.gene56872.t1 AT5G58850 61.871 139 40 2 195 320 103 241 4.01e-53 184
MS.gene56872.t1 AT5G11050 59.060 149 41 3 195 325 103 249 7.85e-52 181
MS.gene56872.t1 AT3G09370 49.045 157 70 2 195 351 133 279 7.06e-42 155
MS.gene56872.t1 AT3G09370 49.045 157 70 2 195 351 128 274 7.85e-42 155
MS.gene56872.t1 AT3G09370 49.045 157 70 2 195 351 141 287 8.61e-42 155
MS.gene56872.t1 AT5G02320 62.136 103 39 0 195 297 125 227 2.82e-39 149
MS.gene56872.t1 AT5G02320 62.136 103 39 0 195 297 125 227 2.82e-39 149
MS.gene56872.t1 AT5G02320 62.136 103 39 0 195 297 65 167 3.66e-39 147
MS.gene56872.t1 AT5G11510 39.791 191 101 2 195 371 79 269 1.26e-38 149
MS.gene56872.t1 AT5G11510 40.217 184 96 2 195 364 79 262 1.68e-38 149
MS.gene56872.t1 AT5G11510 40.217 184 96 2 195 364 79 262 1.68e-38 149
MS.gene56872.t1 AT5G11510 40.217 184 96 2 195 364 79 262 1.68e-38 149
MS.gene56872.t1 AT5G11510 39.791 191 101 2 195 371 79 269 1.73e-38 149
MS.gene56872.t1 AT2G25230 48.872 133 68 0 191 323 20 152 9.74e-38 137
MS.gene56872.t1 AT4G32730 55.000 120 49 1 195 314 85 199 3.59e-37 145
MS.gene56872.t1 AT4G32730 55.000 120 49 1 195 314 85 199 3.59e-37 145
MS.gene56872.t1 AT4G32730 55.000 120 49 1 195 314 85 199 3.59e-37 145
MS.gene56872.t1 AT4G32730 55.000 120 49 1 195 314 85 199 3.59e-37 145
MS.gene56872.t1 AT4G32730 55.000 120 49 1 195 314 85 199 5.08e-37 144
MS.gene56872.t1 AT3G55730 48.507 134 67 1 196 327 55 188 4.05e-36 137
MS.gene56872.t1 AT5G40430 45.324 139 75 1 191 329 48 185 8.28e-35 130
MS.gene56872.t1 AT4G00540 59.434 106 40 1 195 297 101 206 4.90e-34 132
MS.gene56872.t1 AT4G00540 60.577 104 38 1 197 297 101 204 1.60e-33 131
MS.gene56872.t1 AT3G09230 55.340 103 46 0 196 298 54 156 7.23e-33 128
MS.gene56872.t1 AT2G23290 53.846 104 48 0 196 299 12 115 1.89e-32 125
MS.gene56872.t1 AT4G37260 51.923 104 50 0 196 299 12 115 2.45e-32 125
MS.gene56872.t1 AT3G50060 50.962 104 51 0 196 299 5 108 1.86e-31 122
MS.gene56872.t1 AT5G67300 48.039 102 53 0 196 297 5 106 5.02e-29 116
MS.gene56872.t1 AT2G39880 50.000 102 51 0 196 297 49 150 8.79e-29 117
MS.gene56872.t1 AT4G26930 46.667 105 55 1 193 296 17 121 1.93e-28 116
MS.gene56872.t1 AT2G32460 50.435 115 50 4 197 308 8 118 8.55e-28 115
MS.gene56872.t1 AT2G32460 50.435 115 50 4 197 308 20 130 8.80e-28 115
MS.gene56872.t1 AT3G11440 45.872 109 57 2 191 297 37 145 1.26e-27 115
MS.gene56872.t1 AT3G29020 47.706 109 54 1 194 299 62 170 1.32e-27 110
MS.gene56872.t1 AT5G55020 48.571 105 51 2 194 296 25 128 1.42e-27 115
MS.gene56872.t1 AT1G69560 42.149 121 70 0 182 302 108 228 1.50e-27 112
MS.gene56872.t1 AT1G69560 42.149 121 70 0 182 302 92 212 1.50e-27 112
MS.gene56872.t1 AT3G11440 45.872 109 57 2 191 297 37 145 3.37e-27 114
MS.gene56872.t1 AT3G11440 45.872 109 57 2 191 297 37 145 3.37e-27 114
MS.gene56872.t1 AT3G11440 45.872 109 57 2 191 297 37 145 3.37e-27 114
MS.gene56872.t1 AT3G29020 47.706 109 54 1 194 299 64 172 4.65e-27 110
MS.gene56872.t1 AT5G14750 41.525 118 68 1 197 313 18 135 5.28e-27 107
MS.gene56872.t1 AT1G26780 44.167 120 65 1 194 313 95 212 6.07e-27 109
MS.gene56872.t1 AT2G26950 47.009 117 52 3 189 300 11 122 6.08e-27 112
MS.gene56872.t1 AT4G33450 48.598 107 55 0 191 297 13 119 7.87e-27 108
MS.gene56872.t1 AT1G22640 48.113 106 54 1 197 301 14 119 8.06e-27 108
MS.gene56872.t1 AT1G26780 45.000 120 64 1 194 313 95 212 8.60e-27 111
MS.gene56872.t1 AT4G28110 47.826 115 55 2 192 305 9 119 1.56e-26 108
MS.gene56872.t1 AT3G28470 47.059 102 53 1 192 292 9 110 1.90e-26 109
MS.gene56872.t1 AT1G17950 45.614 114 60 1 197 310 5 116 2.29e-26 107
MS.gene56872.t1 AT4G38620 49.533 107 51 2 197 301 14 119 2.37e-26 108
MS.gene56872.t1 AT5G40330 48.454 97 49 1 197 292 14 110 2.53e-26 106
MS.gene56872.t1 AT4G05100 45.299 117 63 1 185 300 3 119 3.00e-26 108
MS.gene56872.t1 AT1G74430 44.340 106 58 1 197 301 14 119 6.12e-26 106
MS.gene56872.t1 AT5G35550 42.373 118 67 1 184 300 3 120 6.88e-26 106
MS.gene56872.t1 AT4G21440 46.296 108 57 1 191 297 8 115 6.90e-26 108
MS.gene56872.t1 AT4G09460 50.485 103 48 2 197 297 14 115 7.27e-26 105
MS.gene56872.t1 AT1G66230 45.946 111 57 2 192 300 9 118 1.09e-25 106
MS.gene56872.t1 AT3G27920 47.423 97 50 1 197 292 16 112 1.52e-25 104
MS.gene56872.t1 AT4G12350 45.045 111 58 2 192 300 9 118 2.03e-25 105
MS.gene56872.t1 AT2G26960 49.533 107 51 2 192 296 17 122 2.74e-25 107
MS.gene56872.t1 AT1G57560 44.860 107 56 2 197 301 14 119 2.88e-25 105
MS.gene56872.t1 AT1G57560 44.860 107 56 2 197 301 14 119 2.96e-25 105
MS.gene56872.t1 AT4G22680 45.946 111 57 2 192 300 9 118 2.98e-25 104
MS.gene56872.t1 AT1G35515 36.875 160 90 4 197 351 14 167 3.07e-25 103
MS.gene56872.t1 AT1G73410 46.903 113 56 1 197 309 6 114 3.29e-25 103
MS.gene56872.t1 AT1G09540 44.860 107 56 2 197 301 14 119 5.97e-25 105
MS.gene56872.t1 AT3G61250 48.649 111 53 3 192 299 9 118 6.52e-25 104
MS.gene56872.t1 AT1G73410 49.533 107 51 1 197 300 6 112 6.77e-25 102
MS.gene56872.t1 AT3G12720 45.283 106 55 2 195 298 22 126 1.18e-24 103
MS.gene56872.t1 AT3G24310 48.148 108 49 3 197 302 20 122 1.38e-24 102
MS.gene56872.t1 AT5G26660 43.925 107 57 2 197 301 14 119 1.85e-24 104
MS.gene56872.t1 AT5G16770 47.059 102 53 1 197 297 14 115 1.96e-24 103
MS.gene56872.t1 AT5G16770 47.059 102 53 1 197 297 14 115 1.96e-24 103
MS.gene56872.t1 AT5G06100 44.762 105 56 2 195 297 32 136 2.03e-24 105
MS.gene56872.t1 AT3G30210 51.042 96 44 2 197 290 29 123 2.13e-24 102
MS.gene56872.t1 AT5G12870 43.925 107 59 1 197 302 20 126 2.34e-24 102
MS.gene56872.t1 AT2G16720 48.113 106 53 2 197 300 14 119 2.60e-24 102
MS.gene56872.t1 AT5G16770 46.154 104 55 1 195 297 12 115 2.77e-24 103
MS.gene56872.t1 AT5G16770 46.154 104 55 1 195 297 12 115 2.77e-24 103
MS.gene56872.t1 AT3G13540 37.288 118 73 1 181 297 9 126 2.86e-24 101
MS.gene56872.t1 AT5G54230 39.041 146 79 3 195 330 12 157 2.86e-24 103
MS.gene56872.t1 AT1G63910 43.925 107 59 1 195 300 12 118 2.92e-24 103
MS.gene56872.t1 AT4G37780 33.333 201 116 5 192 380 9 203 3.18e-24 102
MS.gene56872.t1 AT5G07690 48.485 99 50 1 195 292 12 110 3.23e-24 103
MS.gene56872.t1 AT4G34990 46.226 106 56 1 197 301 14 119 3.59e-24 102
MS.gene56872.t1 AT5G56110 38.686 137 77 3 195 328 12 144 3.60e-24 102
MS.gene56872.t1 AT4G13480 43.333 120 65 2 197 314 8 126 3.92e-24 101
MS.gene56872.t1 AT5G17800 42.017 119 69 0 194 312 90 208 4.87e-24 102
MS.gene56872.t1 AT3G01530 47.115 104 52 2 195 296 25 127 5.50e-24 99.8
MS.gene56872.t1 AT5G06100 44.762 105 56 2 195 297 32 136 5.70e-24 104
MS.gene56872.t1 AT5G06100 44.762 105 56 2 195 297 32 136 5.70e-24 104
MS.gene56872.t1 AT5G06100 44.762 105 56 2 195 297 32 136 5.70e-24 104
MS.gene56872.t1 AT5G06100 44.762 105 56 2 195 297 32 136 5.70e-24 104
MS.gene56872.t1 AT3G02940 47.059 102 53 1 197 297 14 115 6.23e-24 102
MS.gene56872.t1 AT1G18570 42.982 114 64 1 189 301 7 120 6.25e-24 102
MS.gene56872.t1 AT2G47190 43.636 110 61 1 195 303 20 129 6.94e-24 101
MS.gene56872.t1 AT5G61420 47.475 99 51 1 195 292 12 110 7.78e-24 102
MS.gene56872.t1 AT3G02940 47.059 102 53 1 197 297 14 115 9.41e-24 101
MS.gene56872.t1 AT3G02940 47.059 102 53 1 197 297 14 115 9.41e-24 101
MS.gene56872.t1 AT5G52600 42.453 106 60 1 188 292 5 110 9.50e-24 99.0
MS.gene56872.t1 AT5G10280 45.631 103 53 2 197 297 14 115 9.76e-24 102
MS.gene56872.t1 AT1G68320 43.689 103 55 2 197 297 21 122 1.22e-23 100
MS.gene56872.t1 AT5G65230 44.144 111 59 2 189 297 6 115 2.12e-23 100
MS.gene56872.t1 AT3G48920 44.068 118 63 2 180 296 5 120 2.15e-23 99.4
MS.gene56872.t1 AT5G14340 43.119 109 59 2 192 298 21 128 2.18e-23 99.8
MS.gene56872.t1 AT5G60890 45.370 108 58 1 195 301 12 119 2.25e-23 100
MS.gene56872.t1 AT3G27810 44.037 109 59 2 195 302 20 127 2.28e-23 98.6
MS.gene56872.t1 AT3G60460 45.614 114 59 3 185 296 2 114 2.45e-23 100
MS.gene56872.t1 AT3G01140 44.545 110 60 1 192 300 9 118 3.13e-23 100
MS.gene56872.t1 AT1G66370 40.870 115 59 2 197 306 10 120 3.29e-23 98.6
MS.gene56872.t1 AT5G07700 47.423 97 50 1 197 292 14 110 3.60e-23 100
MS.gene56872.t1 AT5G07700 47.423 97 50 1 197 292 14 110 3.60e-23 100
MS.gene56872.t1 AT4G17785 43.810 105 56 2 195 297 13 116 3.82e-23 100
MS.gene56872.t1 AT3G62610 43.519 108 60 1 191 297 8 115 4.22e-23 100
MS.gene56872.t1 AT3G01140 44.545 110 60 1 192 300 52 161 4.35e-23 100
MS.gene56872.t1 AT4G17785 43.810 105 56 2 195 297 13 116 4.55e-23 100
MS.gene56872.t1 AT1G18710 40.566 106 62 1 197 301 14 119 6.64e-23 98.2
MS.gene56872.t1 AT5G16600 43.243 111 60 2 192 300 9 118 7.03e-23 99.4
MS.gene56872.t1 AT5G39700 38.636 132 78 1 171 302 33 161 8.39e-23 95.9
MS.gene56872.t1 AT1G25340 43.137 102 57 1 197 297 20 121 1.03e-22 98.2
MS.gene56872.t1 AT5G15310 43.636 110 61 1 192 300 9 118 1.04e-22 98.6
MS.gene56872.t1 AT5G15310 43.636 110 61 1 192 300 9 118 1.04e-22 99.0
MS.gene56872.t1 AT5G15310 43.636 110 61 1 192 300 9 118 1.13e-22 97.1
MS.gene56872.t1 AT3G13890 40.385 104 61 1 195 297 12 115 1.37e-22 99.0
MS.gene56872.t1 AT5G59780 43.689 103 55 2 197 297 10 111 2.26e-22 95.9
MS.gene56872.t1 AT5G40350 44.762 105 56 2 195 298 17 120 2.32e-22 95.5
MS.gene56872.t1 AT2G47460 41.667 108 62 1 191 297 8 115 2.43e-22 98.6
MS.gene56872.t1 AT3G46130 44.660 103 54 2 197 297 11 112 2.55e-22 96.3
MS.gene56872.t1 AT1G25340 42.574 101 54 1 197 297 20 116 3.32e-22 96.3
MS.gene56872.t1 AT1G06180 44.737 114 58 3 191 300 8 120 4.76e-22 95.1
MS.gene56872.t1 AT3G13890 38.938 113 59 1 195 297 12 124 5.56e-22 97.4
MS.gene56872.t1 AT4G25560 41.905 105 60 1 197 300 12 116 5.62e-22 95.9
MS.gene56872.t1 AT4G01680 40.566 106 62 1 197 301 14 119 5.65e-22 97.1
MS.gene56872.t1 AT4G01680 40.566 106 62 1 197 301 14 119 6.30e-22 94.7
MS.gene56872.t1 AT5G62470 40.000 110 66 0 191 300 8 117 6.32e-22 97.1
MS.gene56872.t1 AT1G74080 44.340 106 58 1 197 301 14 119 6.56e-22 96.7
MS.gene56872.t1 AT1G25340 42.574 101 54 1 197 297 20 116 6.73e-22 96.3
MS.gene56872.t1 AT5G62320 43.363 113 54 3 197 300 15 126 6.96e-22 94.7
MS.gene56872.t1 AT3G08500 43.137 102 57 1 197 297 32 133 8.04e-22 96.7
MS.gene56872.t1 AT5G49330 36.719 128 80 1 191 317 8 135 9.07e-22 96.3
MS.gene56872.t1 AT3G23250 43.564 101 56 1 191 290 8 108 1.17e-21 95.1
MS.gene56872.t1 AT2G31180 41.964 112 62 2 191 300 8 118 1.19e-21 94.4
MS.gene56872.t1 AT5G57620 41.071 112 64 2 192 301 9 120 1.48e-21 95.5
MS.gene56872.t1 AT1G56160 40.909 110 62 2 192 299 11 119 1.99e-21 94.7
MS.gene56872.t1 AT3G53200 42.727 110 60 2 190 297 4 112 2.12e-21 93.2
MS.gene56872.t1 AT1G48000 44.330 97 53 1 195 290 32 128 2.55e-21 93.2
MS.gene56872.t1 AT1G79180 38.983 118 71 1 192 308 11 128 3.34e-21 94.0
MS.gene56872.t1 AT1G34670 43.137 102 57 1 197 297 14 115 4.11e-21 94.7
MS.gene56872.t1 AT1G16490 39.286 112 67 1 192 302 11 122 5.37e-21 92.8
MS.gene56872.t1 AT5G23000 42.593 108 60 2 192 297 9 116 5.46e-21 94.0
MS.gene56872.t1 AT5G65790 38.281 128 76 3 192 317 9 135 9.92e-21 94.0
MS.gene56872.t1 AT3G47600 38.400 125 68 3 192 310 9 130 1.01e-20 93.2
MS.gene56872.t1 AT4G01680 38.136 118 60 2 197 301 14 131 1.07e-20 93.6
MS.gene56872.t1 AT1G74650 42.593 108 61 1 191 297 8 115 1.32e-20 92.8
MS.gene56872.t1 AT5G62470 39.474 114 62 2 191 300 8 118 2.26e-20 92.4
MS.gene56872.t1 AT1G14350 40.000 105 60 1 188 292 19 120 2.62e-20 93.2
MS.gene56872.t1 AT1G14350 40.000 105 60 1 188 292 19 120 2.62e-20 93.2
MS.gene56872.t1 AT1G08810 41.818 110 63 1 192 300 9 118 2.85e-20 90.9
MS.gene56872.t1 AT3G49690 41.667 108 61 2 192 297 9 116 4.15e-20 91.3
MS.gene56872.t1 AT3G12820 41.071 112 63 2 192 301 11 121 5.17e-20 89.4
MS.gene56872.t1 AT5G49620 39.316 117 70 1 188 303 19 135 5.88e-20 90.5
MS.gene56872.t1 AT3G28910 40.000 110 65 1 192 300 9 118 6.86e-20 90.5
MS.gene56872.t1 AT2G02820 40.594 101 57 1 188 288 24 121 2.36e-19 89.4
MS.gene56872.t1 AT5G52260 41.509 106 59 2 197 300 14 118 3.10e-19 87.8
MS.gene56872.t1 AT2G02820 39.048 105 61 1 188 292 24 125 3.69e-19 90.1
MS.gene56872.t1 AT2G02820 39.048 105 61 1 188 292 24 125 4.47e-19 89.7
MS.gene56872.t1 AT5G35550 50.704 71 35 0 230 300 53 123 5.19e-19 87.0
MS.gene56872.t1 AT5G26660 39.785 93 55 1 230 322 17 108 7.43e-19 87.8
MS.gene56872.t1 AT1G66380 40.351 114 66 2 197 309 10 122 8.42e-19 83.2
MS.gene56872.t1 AT5G14750 39.326 89 52 1 227 313 13 101 3.38e-18 82.4
MS.gene56872.t1 AT1G56650 44.330 97 53 1 197 292 10 106 3.46e-18 84.3
MS.gene56872.t1 AT3G06490 37.838 111 66 2 195 303 19 128 6.47e-18 84.7
MS.gene56872.t1 AT2G36890 39.815 108 63 2 192 297 9 116 1.23e-17 83.6
MS.gene56872.t1 AT1G66390 43.299 97 54 1 197 292 10 106 1.66e-17 82.4
MS.gene56872.t1 AT2G36890 39.815 108 63 2 192 297 50 157 1.85e-17 84.0
MS.gene56872.t1 AT3G27810 49.315 73 36 1 230 302 7 78 3.50e-17 79.7
MS.gene56872.t1 AT1G79180 31.126 151 70 2 192 308 11 161 5.79e-17 82.0
MS.gene56872.t1 AT3G18100 41.489 94 55 0 197 290 546 639 7.36e-17 84.0
MS.gene56872.t1 AT5G49620 35.115 131 70 2 188 303 19 149 8.73e-17 81.6
MS.gene56872.t1 AT3G53200 50.000 68 34 0 230 297 12 79 9.92e-17 79.0
MS.gene56872.t1 AT3G18100 41.489 94 55 0 197 290 498 591 1.11e-16 83.2
MS.gene56872.t1 AT3G18100 41.489 94 55 0 197 290 385 478 1.39e-16 82.8
MS.gene56872.t1 AT3G18100 41.489 94 55 0 197 290 333 426 1.61e-16 82.4
MS.gene56872.t1 AT3G12820 48.611 72 37 0 230 301 2 73 1.81e-16 77.8
MS.gene56872.t1 AT5G40350 50.725 69 33 1 230 298 8 75 2.75e-16 77.0
MS.gene56872.t1 AT5G59780 44.118 68 38 0 230 297 23 90 5.73e-16 77.0
MS.gene56872.t1 AT2G37630 39.216 102 59 1 199 297 6 107 6.20e-16 79.7
MS.gene56872.t1 AT1G22640 52.459 61 29 0 241 301 2 62 1.10e-15 75.9
MS.gene56872.t1 AT3G46130 44.118 68 38 0 230 297 23 90 1.11e-15 76.6
MS.gene56872.t1 AT3G46130 44.118 68 38 0 230 297 13 80 1.21e-15 76.3
MS.gene56872.t1 AT3G47600 42.169 83 46 1 230 310 42 124 6.31e-15 75.9
MS.gene56872.t1 AT1G71030 39.706 68 41 0 233 300 5 72 2.05e-13 68.9
MS.gene56872.t1 AT1G71030 39.706 68 41 0 233 300 19 86 2.22e-13 69.3
MS.gene56872.t1 AT1G66380 41.250 80 46 1 230 309 11 89 4.95e-13 65.9
MS.gene56872.t1 AT5G14750 35.616 73 47 0 241 313 2 74 5.89e-13 66.6
MS.gene56872.t1 AT5G14750 35.616 73 47 0 241 313 2 74 5.89e-13 66.6
MS.gene56872.t1 AT3G23250 52.000 50 24 0 241 290 2 51 6.41e-11 62.8

Find 71 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTTTCAGCCTTGGTTTC+AGG 0.147851 8.1:-17598034 None:intergenic
CCTTTATGTCAGGCCTTAAA+TGG 0.209585 8.1:-17598836 None:intergenic
TATATTGAAAATTGTCAATA+AGG 0.233218 8.1:-17598286 None:intergenic
AAAGATGGCATAACCATTTA+AGG 0.233635 8.1:+17598823 MS.gene56872:CDS
CACTGTTTCCCTATTCTTCC+AGG 0.238484 8.1:-17598795 None:intergenic
AAGAAATCAACTTGATCTTA+TGG 0.277514 8.1:+17598334 MS.gene56872:CDS
CTTCGAACGACATGTTCTTT+TGG 0.279895 8.1:-17599310 None:intergenic
ATATATCAAGAGCCTGAATT+TGG 0.296321 8.1:+17599359 MS.gene56872:CDS
TTCTATTCAATCCAGCTCTT+TGG 0.315215 8.1:-17598463 None:intergenic
AGATCAAGTTGATTTCTTCT+AGG 0.315914 8.1:-17598329 None:intergenic
AGTTAAGAAGGAGTTGGATT+TGG 0.339487 8.1:+17599713 MS.gene56872:CDS
CAGAAGTTACCTGGAAGAAT+AGG 0.346815 8.1:+17598786 MS.gene56872:CDS
TAAGAAGGAGTTGGATTTGG+TGG 0.356545 8.1:+17599716 MS.gene56872:CDS
ATTGCATTCTCAGTTCTTCC+TGG 0.357357 8.1:-17599249 None:intergenic
TGGTGGAACAACATGGAATA+AGG 0.358646 8.1:+17598745 MS.gene56872:CDS
AAATCATTGAACACATAGTT+TGG 0.381641 8.1:-17599522 None:intergenic
TTCCTATCTCTGTATGAGCT+TGG 0.382934 8.1:-17599197 None:intergenic
TTTGGCACTGAGCGGTCATT+AGG 0.385172 8.1:-17599504 None:intergenic
TTCTCTTTGTTGCATTCCAA+TGG 0.390029 8.1:-17599278 None:intergenic
GATCAAGTTGATTTCTTCTA+GGG 0.392868 8.1:-17598328 None:intergenic
TTTAGCTCATCTTTCAGCCT+TGG 0.399678 8.1:-17598041 None:intergenic
CCATTTAAGGCCTGACATAA+AGG 0.414324 8.1:+17598836 MS.gene56872:CDS
ACAATCACAACCAATGCATT+TGG 0.420626 8.1:+17598001 MS.gene56872:CDS
TAATCTTGATGAGCATCAAT+TGG 0.428147 8.1:+17599677 MS.gene56872:CDS
GGTTGAAGTTAAGAAGGAGT+TGG 0.436425 8.1:+17599707 MS.gene56872:CDS
GAAAGAGGTTGAAGTTAAGA+AGG 0.444477 8.1:+17599701 MS.gene56872:CDS
ATCCAAGCTCATACAGAGAT+AGG 0.444813 8.1:+17599195 MS.gene56872:CDS
AGAAGTTACCTGGAAGAATA+GGG 0.448161 8.1:+17598787 MS.gene56872:CDS
TATGTCAAGTGTTCCTACTT+TGG 0.449961 8.1:+17599602 MS.gene56872:CDS
GCTCTTTGGTAATAATTTGT+CGG 0.454290 8.1:-17598449 None:intergenic
CATATTGCTCAGAAGTTACC+TGG 0.464115 8.1:+17598777 MS.gene56872:CDS
GGTTTCTGAAGGATTATTGA+AGG 0.465016 8.1:-17598378 None:intergenic
ACAAATTATTACCAAAGAGC+TGG 0.469591 8.1:+17598452 MS.gene56872:CDS
CTCAATGACTTGGTTTCTGA+AGG 0.472621 8.1:-17598389 None:intergenic
AATGGACAGTGGAAGAAGAT+AGG 0.483122 8.1:+17598558 MS.gene56872:CDS
TCTTGCAGAAGAGTGCCTCT+TGG 0.490737 8.1:-17599336 None:intergenic
TGAGCATCAATTGGAGAAAG+AGG 0.504997 8.1:+17599686 MS.gene56872:CDS
CAATCATAGTGAAGGGGCAA+TGG 0.511552 8.1:+17598540 MS.gene56872:CDS
TTGTAAGAAATTACCATGAC+AGG 0.514825 8.1:-17598081 None:intergenic
CTGGATTGAATAGAAACAAC+GGG 0.519465 8.1:+17598471 MS.gene56872:CDS
TTAAATGCTCTTCTTGTCGT+AGG 0.523576 8.1:-17598503 None:intergenic
AAACAGATTGTTGAGTCAAA+TGG 0.530276 8.1:+17598725 MS.gene56872:intron
ATACTTGAAACTTCATCCTC+AGG 0.532492 8.1:-17598422 None:intergenic
GATCAGTTTCATCATGTGCA+TGG 0.533505 8.1:+17598119 MS.gene56872:CDS
GAAGAAAACAATCATAGTGA+AGG 0.542551 8.1:+17598532 MS.gene56872:CDS
AAGAAAACAATCATAGTGAA+GGG 0.548416 8.1:+17598533 MS.gene56872:CDS
TTCAGTGCTCATTCCTGTCA+TGG 0.553991 8.1:+17598068 MS.gene56872:CDS
TGACAGGAATGAGCACTGAA+TGG 0.554502 8.1:-17598065 None:intergenic
TTTGGTGGAGATGATCTCTC+AGG 0.555177 8.1:+17599731 MS.gene56872:CDS
ATACAGAGATAGGAAATAAG+TGG 0.556233 8.1:+17599205 MS.gene56872:CDS
TGATTTGCAATACGTGGCTG+AGG 0.559901 8.1:-17599474 None:intergenic
GGAAACAGTGCAGAGAAAGA+TGG 0.587948 8.1:+17598808 MS.gene56872:CDS
AGACATATGGACAGATGAAG+AGG 0.588670 8.1:+17599161 MS.gene56872:CDS
AGTCAAATGGTGGAACAACA+TGG 0.589895 8.1:+17598738 MS.gene56872:CDS
TACAACATAACTCAATGACT+TGG 0.593106 8.1:-17598399 None:intergenic
CAGATTGTTGAGTCAAATGG+TGG 0.594993 8.1:+17598728 MS.gene56872:intron
AACAACATGGAATAAGGAAG+TGG 0.595874 8.1:+17598751 MS.gene56872:CDS
ATTGGAATGCAACAAAGAGA+AGG 0.604090 8.1:+17599280 MS.gene56872:CDS
CAAAATTGATTTGCAATACG+TGG 0.610096 8.1:-17599480 None:intergenic
TACAGAGATAGGAAATAAGT+GGG 0.612378 8.1:+17599206 MS.gene56872:CDS
AAGAAAACTACCTGAAACCA+AGG 0.625495 8.1:+17598024 MS.gene56872:CDS
ATGCATTGGTTGTGATTGTG+AGG 0.633671 8.1:-17597997 None:intergenic
AGAAAACAATCATAGTGAAG+GGG 0.635290 8.1:+17598534 MS.gene56872:CDS
AGTGAAGGGGCAATGGACAG+TGG 0.641499 8.1:+17598547 MS.gene56872:CDS
TGCATTGGTTGTGATTGTGA+GGG 0.667078 8.1:-17597996 None:intergenic
GCTGGATTGAATAGAAACAA+CGG 0.670291 8.1:+17598470 MS.gene56872:CDS
ATTGAGTTATGTTGTACCTG+AGG 0.678128 8.1:+17598406 MS.gene56872:CDS
TGGCTGAGGAAGCTGTGCTG+CGG 0.683231 8.1:-17599460 None:intergenic
ACACATAGTTTGGCACTGAG+CGG 0.695454 8.1:-17599512 None:intergenic
AATTTGTTTGAAGAAGAGTG+TGG 0.705506 8.1:+17599558 MS.gene56872:CDS
TGTCGTTCGAAGTATCCAAG+AGG 0.712598 8.1:+17599321 MS.gene56872:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAACAAAAATTCAAATAT+TGG - chr8.1:17598966-17598985 None:intergenic 15.0%
!! TATATTGAAAATTGTCAATA+AGG - chr8.1:17598289-17598308 None:intergenic 15.0%
!!! ATTGACAATTTTCAATATAA+TGG + chr8.1:17598290-17598309 MS.gene56872:CDS 15.0%
!!! TATAAGGTAATATTTTAACT+TGG + chr8.1:17598997-17599016 MS.gene56872:intron 15.0%
!! ATATAGAAGGAAAATTCATA+TGG - chr8.1:17599112-17599131 None:intergenic 20.0%
!! GAATTGAAGTTTAATATAGA+AGG - chr8.1:17599125-17599144 None:intergenic 20.0%
!! TATTGAAGGAAAAATAACTA+TGG - chr8.1:17598367-17598386 None:intergenic 20.0%
!! TTTCTCTTAACTTTCATATA+AGG + chr8.1:17598981-17599000 MS.gene56872:intron 20.0%
!!! TTTCAAGTTTTTGCATATTT+TGG + chr8.1:17598658-17598677 MS.gene56872:intron 20.0%
! AAATCATTGAACACATAGTT+TGG - chr8.1:17599525-17599544 None:intergenic 25.0%
! AAGAAAACAATCATAGTGAA+GGG + chr8.1:17598533-17598552 MS.gene56872:CDS 25.0%
! AAGAAATCAACTTGATCTTA+TGG + chr8.1:17598334-17598353 MS.gene56872:CDS 25.0%
! AGAATGCAATAAAAAACCAT+TGG + chr8.1:17599262-17599281 MS.gene56872:CDS 25.0%
! ATTTATTCTATATACGTGTG+TGG - chr8.1:17598876-17598895 None:intergenic 25.0%
!! ACTCAAAACTTTGATCTTTT+TGG + chr8.1:17598176-17598195 MS.gene56872:CDS 25.0%
!! TGTGTTCAATGATTTTTCTT+TGG + chr8.1:17599530-17599549 MS.gene56872:CDS 25.0%
!!! AAAGATCAAAGTTTTGAGTT+TGG - chr8.1:17598175-17598194 None:intergenic 25.0%
!!! AATTCTTTTTCATCCAAAGT+AGG - chr8.1:17599618-17599637 None:intergenic 25.0%
!!! AGAGATTTTGATGTTTATGA+TGG + chr8.1:17598218-17598237 MS.gene56872:CDS 25.0%
AAAAATGGAACCTTTATGTC+AGG - chr8.1:17598849-17598868 None:intergenic 30.0%
AAACAGATTGTTGAGTCAAA+TGG + chr8.1:17598725-17598744 MS.gene56872:intron 30.0%
AAAGATGGCATAACCATTTA+AGG + chr8.1:17598823-17598842 MS.gene56872:CDS 30.0%
ACAAATTATTACCAAAGAGC+TGG + chr8.1:17598452-17598471 MS.gene56872:CDS 30.0%
AGAAAACAATCATAGTGAAG+GGG + chr8.1:17598534-17598553 MS.gene56872:CDS 30.0%
ATACAGAGATAGGAAATAAG+TGG + chr8.1:17599205-17599224 MS.gene56872:CDS 30.0%
ATATATCAAGAGCCTGAATT+TGG + chr8.1:17599359-17599378 MS.gene56872:CDS 30.0%
GAAGAAAACAATCATAGTGA+AGG + chr8.1:17598532-17598551 MS.gene56872:CDS 30.0%
TAATCTTGATGAGCATCAAT+TGG + chr8.1:17599677-17599696 MS.gene56872:CDS 30.0%
TACAACATAACTCAATGACT+TGG - chr8.1:17598402-17598421 None:intergenic 30.0%
TACAGAGATAGGAAATAAGT+GGG + chr8.1:17599206-17599225 MS.gene56872:CDS 30.0%
TACGTGTGTGGAAAAAAAAA+TGG - chr8.1:17598864-17598883 None:intergenic 30.0%
TTGTAAGAAATTACCATGAC+AGG - chr8.1:17598084-17598103 None:intergenic 30.0%
! AATTTGTTTGAAGAAGAGTG+TGG + chr8.1:17599558-17599577 MS.gene56872:CDS 30.0%
! CATTTTTGCAGAAAGACATA+TGG + chr8.1:17599148-17599167 MS.gene56872:intron 30.0%
! GCTACAAGTAATCTTTTTCT+TGG - chr8.1:17599430-17599449 None:intergenic 30.0%
! GCTCTTTGGTAATAATTTGT+CGG - chr8.1:17598452-17598471 None:intergenic 30.0%
! TAGTTTTCTTCCAAATGCAT+TGG - chr8.1:17598014-17598033 None:intergenic 30.0%
! TCTTTTGCTGAGAATAATAG+TGG + chr8.1:17598245-17598264 MS.gene56872:CDS 30.0%
!! AGATCAAGTTGATTTCTTCT+AGG - chr8.1:17598332-17598351 None:intergenic 30.0%
!! CAAAATTGATTTGCAATACG+TGG - chr8.1:17599483-17599502 None:intergenic 30.0%
!! GATCAAGTTGATTTCTTCTA+GGG - chr8.1:17598331-17598350 None:intergenic 30.0%
AACAACATGGAATAAGGAAG+TGG + chr8.1:17598751-17598770 MS.gene56872:CDS 35.0%
AAGAAAACTACCTGAAACCA+AGG + chr8.1:17598024-17598043 MS.gene56872:CDS 35.0%
ACAATCACAACCAATGCATT+TGG + chr8.1:17598001-17598020 MS.gene56872:CDS 35.0%
AGAAGTTACCTGGAAGAATA+GGG + chr8.1:17598787-17598806 MS.gene56872:CDS 35.0%
AGTTAAGAAGGAGTTGGATT+TGG + chr8.1:17599713-17599732 MS.gene56872:CDS 35.0%
ATACTTGAAACTTCATCCTC+AGG - chr8.1:17598425-17598444 None:intergenic 35.0%
ATTGAGTTATGTTGTACCTG+AGG + chr8.1:17598406-17598425 MS.gene56872:CDS 35.0%
ATTGGAATGCAACAAAGAGA+AGG + chr8.1:17599280-17599299 MS.gene56872:CDS 35.0%
CTGGATTGAATAGAAACAAC+GGG + chr8.1:17598471-17598490 MS.gene56872:CDS 35.0%
GAAAGAGGTTGAAGTTAAGA+AGG + chr8.1:17599701-17599720 MS.gene56872:CDS 35.0%
GCTGGATTGAATAGAAACAA+CGG + chr8.1:17598470-17598489 MS.gene56872:CDS 35.0%
TATGTCAAGTGTTCCTACTT+TGG + chr8.1:17599602-17599621 MS.gene56872:CDS 35.0%
TTAAATGCTCTTCTTGTCGT+AGG - chr8.1:17598506-17598525 None:intergenic 35.0%
TTCTATTCAATCCAGCTCTT+TGG - chr8.1:17598466-17598485 None:intergenic 35.0%
TTCTCTTTGTTGCATTCCAA+TGG - chr8.1:17599281-17599300 None:intergenic 35.0%
! ATCCTCCAATCAAGTTTTTG+GGG + chr8.1:17598148-17598167 MS.gene56872:CDS 35.0%
! CATCCTCCAATCAAGTTTTT+GGG + chr8.1:17598147-17598166 MS.gene56872:CDS 35.0%
! GGTTTCTGAAGGATTATTGA+AGG - chr8.1:17598381-17598400 None:intergenic 35.0%
! TCATCCTCCAATCAAGTTTT+TGG + chr8.1:17598146-17598165 MS.gene56872:CDS 35.0%
!!! CTTTTTGGTAATGCAGAATG+TGG + chr8.1:17598191-17598210 MS.gene56872:CDS 35.0%
!!! GATCTTTTTCGAAAGTCTCT+TGG - chr8.1:17599396-17599415 None:intergenic 35.0%
AATGGACAGTGGAAGAAGAT+AGG + chr8.1:17598558-17598577 MS.gene56872:CDS 40.0%
AGACATATGGACAGATGAAG+AGG + chr8.1:17599161-17599180 MS.gene56872:CDS 40.0%
ATCCAAGCTCATACAGAGAT+AGG + chr8.1:17599195-17599214 MS.gene56872:CDS 40.0%
ATTGCATTCTCAGTTCTTCC+TGG - chr8.1:17599252-17599271 None:intergenic 40.0%
CAGAAGTTACCTGGAAGAAT+AGG + chr8.1:17598786-17598805 MS.gene56872:CDS 40.0%
CAGATTGTTGAGTCAAATGG+TGG + chr8.1:17598728-17598747 MS.gene56872:intron 40.0%
CATATTGCTCAGAAGTTACC+TGG + chr8.1:17598777-17598796 MS.gene56872:CDS 40.0%
CCTTTATGTCAGGCCTTAAA+TGG - chr8.1:17598839-17598858 None:intergenic 40.0%
GAGATTGCAAAAAGATTGCC+AGG + chr8.1:17599231-17599250 MS.gene56872:CDS 40.0%
GATCAGTTTCATCATGTGCA+TGG + chr8.1:17598119-17598138 MS.gene56872:CDS 40.0%
GGTTGAAGTTAAGAAGGAGT+TGG + chr8.1:17599707-17599726 MS.gene56872:CDS 40.0%
TAAGAAGGAGTTGGATTTGG+TGG + chr8.1:17599716-17599735 MS.gene56872:CDS 40.0%
TGAGCATCAATTGGAGAAAG+AGG + chr8.1:17599686-17599705 MS.gene56872:CDS 40.0%
TGGTGGAACAACATGGAATA+AGG + chr8.1:17598745-17598764 MS.gene56872:CDS 40.0%
TTCCTATCTCTGTATGAGCT+TGG - chr8.1:17599200-17599219 None:intergenic 40.0%
TTGGACCCCAAAAACTTGAT+TGG - chr8.1:17598156-17598175 None:intergenic 40.0%
! AGTCAAATGGTGGAACAACA+TGG + chr8.1:17598738-17598757 MS.gene56872:CDS 40.0%
! CCATTTAAGGCCTGACATAA+AGG + chr8.1:17598836-17598855 MS.gene56872:CDS 40.0%
! CTTCGAACGACATGTTCTTT+TGG - chr8.1:17599313-17599332 None:intergenic 40.0%
! TTTAGCTCATCTTTCAGCCT+TGG - chr8.1:17598044-17598063 None:intergenic 40.0%
!! ATGCATTGGTTGTGATTGTG+AGG - chr8.1:17598000-17598019 None:intergenic 40.0%
!! CTCAATGACTTGGTTTCTGA+AGG - chr8.1:17598392-17598411 None:intergenic 40.0%
!! TGCATTGGTTGTGATTGTGA+GGG - chr8.1:17597999-17598018 None:intergenic 40.0%
!! TTTTTCGAAAGTCTCTTGGC+GGG - chr8.1:17599392-17599411 None:intergenic 40.0%
!!! CTTTTTCGAAAGTCTCTTGG+CGG - chr8.1:17599393-17599412 None:intergenic 40.0%
CAATCATAGTGAAGGGGCAA+TGG + chr8.1:17598540-17598559 MS.gene56872:CDS 45.0%
CACTGTTTCCCTATTCTTCC+AGG - chr8.1:17598798-17598817 None:intergenic 45.0%
CATCTTTCAGCCTTGGTTTC+AGG - chr8.1:17598037-17598056 None:intergenic 45.0%
GACCCCAAAAACTTGATTGG+AGG - chr8.1:17598153-17598172 None:intergenic 45.0%
GGAAACAGTGCAGAGAAAGA+TGG + chr8.1:17598808-17598827 MS.gene56872:CDS 45.0%
TTCAGTGCTCATTCCTGTCA+TGG + chr8.1:17598068-17598087 MS.gene56872:CDS 45.0%
TTTGGTGGAGATGATCTCTC+AGG + chr8.1:17599731-17599750 MS.gene56872:CDS 45.0%
! ACACATAGTTTGGCACTGAG+CGG - chr8.1:17599515-17599534 None:intergenic 45.0%
! TGATTTGCAATACGTGGCTG+AGG - chr8.1:17599477-17599496 None:intergenic 45.0%
! TGTCGTTCGAAGTATCCAAG+AGG + chr8.1:17599321-17599340 MS.gene56872:CDS 45.0%
!! GCGGGTTTTGATCCAAATTC+AGG - chr8.1:17599374-17599393 None:intergenic 45.0%
!! TGACAGGAATGAGCACTGAA+TGG - chr8.1:17598068-17598087 None:intergenic 45.0%
! TTTGGCACTGAGCGGTCATT+AGG - chr8.1:17599507-17599526 None:intergenic 50.0%
!! TCTTGCAGAAGAGTGCCTCT+TGG - chr8.1:17599339-17599358 None:intergenic 50.0%
AGTGAAGGGGCAATGGACAG+TGG + chr8.1:17598547-17598566 MS.gene56872:CDS 55.0%
TGGCTGAGGAAGCTGTGCTG+CGG - chr8.1:17599463-17599482 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 17597963 17599773 17597963 ID=MS.gene56872
chr8.1 mRNA 17597963 17599773 17597963 ID=MS.gene56872.t1;Parent=MS.gene56872
chr8.1 exon 17597963 17598579 17597963 ID=MS.gene56872.t1.exon1;Parent=MS.gene56872.t1
chr8.1 CDS 17597963 17598579 17597963 ID=cds.MS.gene56872.t1;Parent=MS.gene56872.t1
chr8.1 exon 17598731 17598857 17598731 ID=MS.gene56872.t1.exon2;Parent=MS.gene56872.t1
chr8.1 CDS 17598731 17598857 17598731 ID=cds.MS.gene56872.t1;Parent=MS.gene56872.t1
chr8.1 exon 17599159 17599773 17599159 ID=MS.gene56872.t1.exon3;Parent=MS.gene56872.t1
chr8.1 CDS 17599159 17599773 17599159 ID=cds.MS.gene56872.t1;Parent=MS.gene56872.t1
Gene Sequence

>MS.gene56872

ATGGTTTTCGACACAAATCTCAGAGAAAAGTATCCCTCACAATCACAACCAATGCATTTGGAAGAAAACTACCTGAAACCAAGGCTGAAAGATGAGCTAAATCCATTCAGTGCTCATTCCTGTCATGGTAATTTCTTACAAGATTTTCAGCATATTGATCAGTTTCATCATGTGCATGGATCATCATCCTCCAATCAAGTTTTTGGGGTCCAAACTCAAAACTTTGATCTTTTTGGTAATGCAGAATGTGGAAATAGAGATTTTGATGTTTATGATGGAAAGTCTTTTGCTGAGAATAATAGTGGTAGCGAGCATGCTCATAACCTTATTGACAATTTTCAATATAATGGTTTTAGTTTGAATATCCCTAGAAGAAATCAACTTGATCTTATGGTTGAAAACCATAGTTATTTTTCCTTCAATAATCCTTCAGAAACCAAGTCATTGAGTTATGTTGTACCTGAGGATGAAGTTTCAAGTATAGCACCGACAAATTATTACCAAAGAGCTGGATTGAATAGAAACAACGGGTTGTTATCTCCTACGACAAGAAGAGCATTTAAAGCGAAGAAGAAAACAATCATAGTGAAGGGGCAATGGACAGTGGAAGAAGATAGGTGCATAATTTTCTTTAAAACTTCTTGTTTACATAACTATATTAATTAAGCTTGTTACATAATTTTTTTTCATCACATTTTCAAGTTTTTGCATATTTTGGTTTTAATATAAAACACATATGTGCTTTGATTGAAATGCTTCTGCAAACAGATTGTTGAGTCAAATGGTGGAACAACATGGAATAAGGAAGTGGTCTCATATTGCTCAGAAGTTACCTGGAAGAATAGGGAAACAGTGCAGAGAAAGATGGCATAACCATTTAAGGCCTGACATAAAGGTTCCATTTTTTTTTCCACACACGTATATAGAATAAATTAATAGATACACACACTTTAGACAACTGAGTCTATACATACAATGTCATCAATGATAAATGCATGATCCAATATTTGAATTTTTGTTTCTCTTAACTTTCATATAAGGTAATATTTTAACTTGGTATGCATACTTTTTTTTGTCTTACAATTAACTAATTAAGTATCTCTATATTCTCACAAAGAGTTCGATGATTGCATGACACAAATTTATCCATATGAATTTTCCTTCTATATTAAACTTCAATTCGCGCATTTTTGCAGAAAGACATATGGACAGATGAAGAGGATAAGATATTGATCCAAGCTCATACAGAGATAGGAAATAAGTGGGCAGAGATTGCAAAAAGATTGCCAGGAAGAACTGAGAATGCAATAAAAAACCATTGGAATGCAACAAAGAGAAGGCAATATTCCAAAAGAACATGTCGTTCGAAGTATCCAAGAGGCACTCTTCTGCAAGAATATATCAAGAGCCTGAATTTGGATCAAAACCCGCCAAGAGACTTTCGAAAAAGATCTTCTGTTAAAGCCAAGAAAAAGATTACTTGTAGCACAAGCAAAGCCGCAGCACAGCTTCCTCAGCCACGTATTGCAAATCAATTTTGTCCTAATGACCGCTCAGTGCCAAACTATGTGTTCAATGATTTTTCTTTGGATGATAATTTGTTTGAAGAAGAGTGTGGTATTGATTCTCTGCTAGATGATATGTCAAGTGTTCCTACTTTGGATGAAAAAGAATTTGATGAAAAAGAATGTGATAAGAGAAGCATGCAAGTTGTTAATCTTGATGAGCATCAATTGGAGAAAGAGGTTGAAGTTAAGAAGGAGTTGGATTTGGTGGAGATGATCTCTCAGGCTAATCAAAATATTAATTGA
Protein sequence

>MS.gene56872.t1

MVFDTNLREKYPSQSQPMHLEENYLKPRLKDELNPFSAHSCHGNFLQDFQHIDQFHHVHGSSSSNQVFGVQTQNFDLFGNAECGNRDFDVYDGKSFAENNSGSEHAHNLIDNFQYNGFSLNIPRRNQLDLMVENHSYFSFNNPSETKSLSYVVPEDEVSSIAPTNYYQRAGLNRNNGLLSPTTRRAFKAKKKTIIVKGQWTVEEDRLLSQMVEQHGIRKWSHIAQKLPGRIGKQCRERWHNHLRPDIKKDIWTDEEDKILIQAHTEIGNKWAEIAKRLPGRTENAIKNHWNATKRRQYSKRTCRSKYPRGTLLQEYIKSLNLDQNPPRDFRKRSSVKAKKKITCSTSKAAAQLPQPRIANQFCPNDRSVPNYVFNDFSLDDNLFEEECGIDSLLDDMSSVPTLDEKEFDEKECDKRSMQVVNLDEHQLEKEVEVKKELDLVEMISQANQNIN