Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57016.t1 | AES98667.1 | 94 | 1144 | 47 | 1 | 1 | 1122 | 1 | 1144 | 0.00E+00 | 2167.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57016.t1 | F4IXE7 | 35.1 | 419 | 267 | 5 | 654 | 1071 | 618 | 1032 | 7.9e-75 | 283.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57016.t1 | G7JZJ8 | 94.0 | 1144 | 47 | 1 | 1 | 1122 | 1 | 1144 | 0.0e+00 | 2167.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene57016.t1 | TR | PHD |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57016.t1 | MTR_5g071340 | 95.192 | 1144 | 33 | 1 | 1 | 1122 | 1 | 1144 | 0.0 | 2242 |
MS.gene57016.t1 | MTR_3g464550 | 47.101 | 1121 | 499 | 22 | 21 | 1118 | 11 | 1060 | 0.0 | 970 |
MS.gene57016.t1 | MTR_5g024390 | 43.852 | 431 | 203 | 10 | 657 | 1062 | 3 | 419 | 1.91e-112 | 357 |
MS.gene57016.t1 | MTR_5g024500 | 42.923 | 431 | 207 | 9 | 657 | 1062 | 3 | 419 | 4.38e-111 | 353 |
MS.gene57016.t1 | MTR_7g109640 | 44.578 | 415 | 212 | 8 | 656 | 1062 | 383 | 787 | 6.79e-110 | 362 |
MS.gene57016.t1 | MTR_3g103120 | 37.523 | 549 | 286 | 13 | 554 | 1064 | 305 | 834 | 3.17e-102 | 342 |
MS.gene57016.t1 | MTR_3g103110 | 36.811 | 508 | 231 | 11 | 626 | 1064 | 307 | 793 | 5.39e-100 | 335 |
MS.gene57016.t1 | MTR_4g027030 | 54.941 | 253 | 103 | 5 | 6 | 253 | 3 | 249 | 2.09e-84 | 275 |
MS.gene57016.t1 | MTR_2g078040 | 35.887 | 496 | 295 | 11 | 576 | 1062 | 685 | 1166 | 1.27e-83 | 298 |
MS.gene57016.t1 | MTR_1g072130 | 33.789 | 512 | 299 | 14 | 598 | 1090 | 760 | 1250 | 2.19e-78 | 283 |
MS.gene57016.t1 | MTR_1g103830 | 35.537 | 484 | 282 | 9 | 589 | 1063 | 551 | 1013 | 4.16e-77 | 280 |
MS.gene57016.t1 | MTR_7g095140 | 34.524 | 336 | 194 | 7 | 751 | 1081 | 6 | 320 | 1.13e-60 | 212 |
MS.gene57016.t1 | MTR_7g102610 | 28.603 | 451 | 234 | 11 | 680 | 1062 | 517 | 947 | 7.79e-45 | 176 |
MS.gene57016.t1 | MTR_4g099530 | 29.257 | 417 | 259 | 15 | 655 | 1062 | 109 | 498 | 1.81e-44 | 169 |
MS.gene57016.t1 | MTR_1g068930 | 28.125 | 416 | 234 | 10 | 694 | 1062 | 459 | 856 | 5.46e-44 | 173 |
MS.gene57016.t1 | MTR_1g068930 | 28.125 | 416 | 234 | 10 | 694 | 1062 | 496 | 893 | 5.57e-44 | 173 |
MS.gene57016.t1 | MTR_3g103160 | 46.951 | 164 | 83 | 1 | 910 | 1073 | 284 | 443 | 3.30e-41 | 158 |
MS.gene57016.t1 | MTR_3g103160 | 36.559 | 186 | 71 | 5 | 690 | 834 | 100 | 279 | 6.79e-17 | 85.1 |
MS.gene57016.t1 | MTR_1g062330 | 28.571 | 448 | 230 | 12 | 686 | 1064 | 378 | 804 | 1.30e-40 | 162 |
MS.gene57016.t1 | MTR_4g056990 | 25.117 | 426 | 240 | 10 | 690 | 1063 | 222 | 620 | 1.09e-35 | 145 |
MS.gene57016.t1 | MTR_4g057290 | 25.060 | 415 | 224 | 10 | 687 | 1035 | 119 | 512 | 6.53e-32 | 132 |
MS.gene57016.t1 | MTR_4g050090 | 23.120 | 532 | 304 | 14 | 606 | 1066 | 148 | 645 | 6.90e-32 | 134 |
MS.gene57016.t1 | MTR_2g084425 | 29.565 | 230 | 141 | 5 | 845 | 1067 | 808 | 1023 | 2.82e-21 | 101 |
MS.gene57016.t1 | MTR_2g084425 | 26.866 | 268 | 123 | 7 | 694 | 907 | 495 | 743 | 3.01e-19 | 94.4 |
MS.gene57016.t1 | MTR_1g062330 | 26.036 | 338 | 168 | 10 | 686 | 959 | 378 | 697 | 9.07e-21 | 99.0 |
MS.gene57016.t1 | MTR_2g084425 | 26.866 | 268 | 123 | 7 | 694 | 907 | 495 | 743 | 3.61e-19 | 94.4 |
MS.gene57016.t1 | MTR_3g058500 | 34.028 | 144 | 88 | 5 | 26 | 167 | 386 | 524 | 8.15e-12 | 70.1 |
MS.gene57016.t1 | MTR_3g109988 | 24.339 | 189 | 112 | 6 | 852 | 1033 | 191 | 355 | 1.82e-11 | 67.4 |
MS.gene57016.t1 | MTR_3g110005 | 24.339 | 189 | 112 | 6 | 852 | 1033 | 191 | 355 | 1.82e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57016.t1 | AT5G58610 | 37.309 | 1115 | 600 | 30 | 12 | 1106 | 14 | 1049 | 0.0 | 666 |
MS.gene57016.t1 | AT5G58610 | 38.024 | 1073 | 569 | 29 | 12 | 1064 | 14 | 1010 | 0.0 | 665 |
MS.gene57016.t1 | AT5G58610 | 38.024 | 1073 | 569 | 29 | 12 | 1064 | 14 | 1010 | 0.0 | 665 |
MS.gene57016.t1 | AT5G58610 | 37.297 | 1110 | 597 | 30 | 17 | 1106 | 10 | 1040 | 0.0 | 655 |
MS.gene57016.t1 | AT5G58610 | 37.297 | 1110 | 597 | 30 | 17 | 1106 | 10 | 1040 | 0.0 | 654 |
MS.gene57016.t1 | AT5G58610 | 36.486 | 1110 | 580 | 32 | 17 | 1106 | 10 | 1014 | 0.0 | 620 |
MS.gene57016.t1 | AT5G58610 | 36.486 | 1110 | 580 | 32 | 17 | 1106 | 10 | 1014 | 0.0 | 620 |
MS.gene57016.t1 | AT5G58610 | 36.801 | 1019 | 548 | 29 | 12 | 1010 | 14 | 956 | 0.0 | 595 |
MS.gene57016.t1 | AT5G58610 | 36.785 | 1014 | 545 | 29 | 17 | 1010 | 10 | 947 | 0.0 | 583 |
MS.gene57016.t1 | AT5G58610 | 35.861 | 976 | 530 | 29 | 17 | 972 | 10 | 909 | 3.76e-173 | 533 |
MS.gene57016.t1 | AT5G58610 | 38.750 | 720 | 387 | 17 | 397 | 1106 | 143 | 818 | 2.82e-146 | 461 |
MS.gene57016.t1 | AT3G14980 | 35.931 | 462 | 288 | 6 | 614 | 1071 | 575 | 1032 | 3.55e-86 | 302 |
MS.gene57016.t1 | AT3G14980 | 35.931 | 462 | 288 | 6 | 614 | 1071 | 530 | 987 | 6.00e-86 | 303 |
MS.gene57016.t1 | AT3G14980 | 35.931 | 462 | 288 | 6 | 614 | 1071 | 575 | 1032 | 1.19e-85 | 302 |
MS.gene57016.t1 | AT3G14980 | 35.931 | 462 | 288 | 6 | 614 | 1071 | 575 | 1032 | 1.19e-85 | 302 |
MS.gene57016.t1 | AT3G14980 | 35.931 | 462 | 288 | 6 | 614 | 1071 | 575 | 1032 | 1.19e-85 | 302 |
MS.gene57016.t1 | AT1G05380 | 38.849 | 417 | 245 | 7 | 651 | 1062 | 514 | 925 | 1.88e-85 | 301 |
MS.gene57016.t1 | AT1G05380 | 38.849 | 417 | 245 | 7 | 651 | 1062 | 514 | 925 | 1.88e-85 | 301 |
MS.gene57016.t1 | AT1G05380 | 38.849 | 417 | 245 | 7 | 651 | 1062 | 514 | 925 | 1.88e-85 | 301 |
MS.gene57016.t1 | AT5G36740 | 34.968 | 469 | 279 | 9 | 611 | 1073 | 512 | 960 | 1.85e-82 | 293 |
MS.gene57016.t1 | AT5G36740 | 34.968 | 469 | 279 | 9 | 611 | 1073 | 512 | 960 | 1.85e-82 | 293 |
MS.gene57016.t1 | AT5G36740 | 34.029 | 479 | 280 | 10 | 611 | 1073 | 359 | 817 | 3.65e-79 | 281 |
MS.gene57016.t1 | AT4G14920 | 35.991 | 439 | 269 | 8 | 655 | 1088 | 578 | 1009 | 1.02e-75 | 273 |
MS.gene57016.t1 | AT4G14920 | 35.991 | 439 | 269 | 8 | 655 | 1088 | 578 | 1009 | 1.02e-75 | 273 |
MS.gene57016.t1 | AT4G14920 | 36.136 | 440 | 268 | 9 | 655 | 1088 | 578 | 1010 | 4.39e-75 | 271 |
MS.gene57016.t1 | AT5G63900 | 44.771 | 306 | 148 | 9 | 762 | 1064 | 255 | 542 | 1.37e-71 | 249 |
MS.gene57016.t1 | AT5G36670 | 32.165 | 485 | 285 | 11 | 611 | 1073 | 512 | 974 | 4.69e-70 | 256 |
MS.gene57016.t1 | AT5G36670 | 32.165 | 485 | 285 | 11 | 611 | 1073 | 512 | 974 | 4.69e-70 | 256 |
MS.gene57016.t1 | AT5G36740 | 34.500 | 400 | 236 | 9 | 611 | 1004 | 512 | 891 | 5.64e-67 | 244 |
MS.gene57016.t1 | AT5G36740 | 34.500 | 400 | 236 | 9 | 611 | 1004 | 512 | 891 | 5.64e-67 | 244 |
MS.gene57016.t1 | AT5G36670 | 34.500 | 400 | 236 | 9 | 611 | 1004 | 512 | 891 | 5.64e-67 | 244 |
MS.gene57016.t1 | AT5G36670 | 31.313 | 495 | 286 | 12 | 611 | 1073 | 359 | 831 | 1.34e-66 | 244 |
MS.gene57016.t1 | AT5G36670 | 31.313 | 495 | 286 | 12 | 611 | 1073 | 512 | 984 | 4.00e-66 | 244 |
MS.gene57016.t1 | AT3G14980 | 34.615 | 364 | 230 | 6 | 614 | 973 | 575 | 934 | 3.10e-59 | 221 |
MS.gene57016.t1 | AT2G27980 | 25.554 | 587 | 342 | 15 | 563 | 1080 | 512 | 1072 | 1.28e-45 | 179 |
MS.gene57016.t1 | AT2G37520 | 28.372 | 430 | 235 | 9 | 686 | 1060 | 402 | 813 | 3.95e-45 | 176 |
MS.gene57016.t1 | AT3G53680 | 26.517 | 445 | 247 | 10 | 686 | 1072 | 419 | 841 | 6.91e-43 | 169 |
MS.gene57016.t1 | AT3G53680 | 26.517 | 445 | 247 | 10 | 686 | 1072 | 421 | 843 | 8.64e-43 | 169 |
MS.gene57016.t1 | AT2G36720 | 27.189 | 434 | 230 | 11 | 694 | 1060 | 557 | 971 | 1.19e-40 | 163 |
MS.gene57016.t1 | AT2G36720 | 27.189 | 434 | 230 | 11 | 694 | 1060 | 557 | 971 | 1.19e-40 | 163 |
Find 255 sgRNAs with CRISPR-Local
Find 427 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGGCTTTCCTAATAGATTT+TGG | 0.119198 | 5.1:-55155285 | None:intergenic |
TCATAAGAATTGTCTTAATT+TGG | 0.158903 | 5.1:+55154355 | MS.gene57016:CDS |
CGTTGAAACCTTGGCTCATT+TGG | 0.168863 | 5.1:-55153419 | None:intergenic |
TAAATTGTTTGGAAGGTTTA+AGG | 0.204622 | 5.1:-55152746 | None:intergenic |
TTCCAAAGGCTTCCAAATTA+TGG | 0.219352 | 5.1:-55153088 | None:intergenic |
CAAAAGGGTGCAGAAGGTTT+TGG | 0.232594 | 5.1:+55153920 | MS.gene57016:CDS |
TTCATTTCATCACCTAAATC+TGG | 0.258138 | 5.1:-55152442 | None:intergenic |
TTGAAGTCCTTGTGCGTTTA+CGG | 0.261009 | 5.1:-55153839 | None:intergenic |
GACCTTGTTGTTGAGGTAAT+TGG | 0.281049 | 5.1:+55152685 | MS.gene57016:CDS |
GGTTCAACTTGAAATTTAAC+TGG | 0.282801 | 5.1:-55153468 | None:intergenic |
AGAAAACATCTTGTTTATCT+TGG | 0.286222 | 5.1:+55153204 | MS.gene57016:CDS |
GGATAACTCGCGAAGGAATT+AGG | 0.287893 | 5.1:+55154066 | MS.gene57016:CDS |
AGCATATTCTTCCCAGATTT+AGG | 0.288962 | 5.1:+55152430 | MS.gene57016:CDS |
GTTGAAACCTTGGCTCATTT+GGG | 0.293407 | 5.1:-55153418 | None:intergenic |
GACGTTCTAAGTCCATAATT+TGG | 0.302733 | 5.1:+55153076 | MS.gene57016:CDS |
ACGGGGCTCCAAAATCTATT+AGG | 0.304902 | 5.1:+55155277 | MS.gene57016:CDS |
GGTGGATGTTTCTAATGTTT+TGG | 0.305903 | 5.1:+55152225 | MS.gene57016:CDS |
TCCAATTGAGTTACGGATAA+AGG | 0.306009 | 5.1:+55152315 | MS.gene57016:CDS |
GTTTCTGGACTATTCTTTCC+TGG | 0.312919 | 5.1:+55157026 | MS.gene57016:CDS |
GTCCATAATTTGGAAGCCTT+TGG | 0.322129 | 5.1:+55153086 | MS.gene57016:CDS |
GCTTGATCCACTTCAGATAC+TGG | 0.326871 | 5.1:-55157399 | None:intergenic |
TTTGTCCATCATGCCGTTGC+GGG | 0.334836 | 5.1:+55154542 | MS.gene57016:CDS |
AACAGATTTGGTATGATATT+AGG | 0.340134 | 5.1:+55152599 | MS.gene57016:CDS |
ATTACAAGTCCATTCTCTAA+TGG | 0.340868 | 5.1:-55152644 | None:intergenic |
CCTCTTGTTACAACCGATTC+CGG | 0.341704 | 5.1:-55157099 | None:intergenic |
CTAGTCTTGCCTGCTGTTCC+CGG | 0.346824 | 5.1:+55156940 | MS.gene57016:CDS |
GTGATAATGGAAATCGAAAA+AGG | 0.351320 | 5.1:+55151470 | MS.gene57016:CDS |
TCCTTTATCCGTAACTCAAT+TGG | 0.356636 | 5.1:-55152316 | None:intergenic |
CGGATAAAGGATCTTCCATT+TGG | 0.359722 | 5.1:+55152328 | MS.gene57016:CDS |
CGCCGACTCCTCAAACTTGT+TGG | 0.370823 | 5.1:+55152876 | MS.gene57016:CDS |
TCATCAGAAGCTAAAGCAAC+TGG | 0.372787 | 5.1:+55156906 | MS.gene57016:intron |
CCATCTATAGTACGTAATTC+AGG | 0.376584 | 5.1:-55153792 | None:intergenic |
ACCTGTTGTCAGAATCTATA+TGG | 0.390234 | 5.1:+55154092 | MS.gene57016:CDS |
GAATGATGGATCTACAAGTT+TGG | 0.392714 | 5.1:+55157442 | MS.gene57016:CDS |
GATGGTGATAAGAGTGATAA+TGG | 0.395193 | 5.1:+55151457 | MS.gene57016:CDS |
ATTGGTTACCAAGAGGGAAA+TGG | 0.396210 | 5.1:+55152518 | MS.gene57016:CDS |
GCGACTCCAAAACAACAAAA+TGG | 0.399161 | 5.1:+55157333 | MS.gene57016:CDS |
AACTTTGGATTAAGTTTATC+CGG | 0.400564 | 5.1:-55153288 | None:intergenic |
CGTAGGAGAGTTTCCTCCTT+CGG | 0.403737 | 5.1:-55154033 | None:intergenic |
AAAATCGAAGTGTAAAACTT+TGG | 0.406804 | 5.1:-55153303 | None:intergenic |
CAGTAAAAGACCTTGTACTT+TGG | 0.409730 | 5.1:-55154005 | None:intergenic |
ATGTAGGAGCAAGACGGTTC+GGG | 0.411437 | 5.1:+55153161 | MS.gene57016:CDS |
TATTCTTTCCTGGACTTTCA+AGG | 0.412410 | 5.1:+55157036 | MS.gene57016:CDS |
AAGTCGTCTGTACTGAAATC+TGG | 0.412571 | 5.1:-55156607 | None:intergenic |
TGCTGGAGAAAGGGTTATGC+AGG | 0.413958 | 5.1:-55155459 | None:intergenic |
ATGATCAGAATTGGTCCATT+CGG | 0.414801 | 5.1:-55153718 | None:intergenic |
ATGGCAAGAGGACAAAATTC+TGG | 0.415798 | 5.1:-55153489 | None:intergenic |
TATGATACGCCGAGGGGCAT+TGG | 0.416757 | 5.1:-55154337 | None:intergenic |
CAGCACAAGCATCATTCCTT+TGG | 0.417068 | 5.1:+55152918 | MS.gene57016:CDS |
CGGTTTCTCTTTGCAGTTGG+TGG | 0.417342 | 5.1:-55153819 | None:intergenic |
GGGATGAATCAACTGAGAAT+TGG | 0.419006 | 5.1:+55152500 | MS.gene57016:CDS |
AACATCTTGTTTATCTTGGA+TGG | 0.419268 | 5.1:+55153208 | MS.gene57016:CDS |
CAGTCTCAGTGAAACAGATT+TGG | 0.421567 | 5.1:+55152587 | MS.gene57016:CDS |
GCTCAATCGACTAAACTTCC+AGG | 0.421981 | 5.1:+55156378 | MS.gene57016:CDS |
TCTCCTTCGAGTAAATTGTT+TGG | 0.422550 | 5.1:-55152757 | None:intergenic |
GGTGGTCCAGAGTTCATGTT+AGG | 0.423892 | 5.1:-55153354 | None:intergenic |
ATCACCACCATGATCAGAAT+TGG | 0.425092 | 5.1:-55153727 | None:intergenic |
GATGTAGGAGCAAGACGGTT+CGG | 0.425946 | 5.1:+55153160 | MS.gene57016:CDS |
GTAGTCTTCCTTCTTTCAGT+TGG | 0.426111 | 5.1:-55153618 | None:intergenic |
CCTGAATTACGTACTATAGA+TGG | 0.427897 | 5.1:+55153792 | MS.gene57016:CDS |
ATCAGTAACCAACAAGTTTG+AGG | 0.429317 | 5.1:-55152884 | None:intergenic |
TGATCAGAATTGGTCCATTC+GGG | 0.429936 | 5.1:-55153717 | None:intergenic |
TTGGTTACCAAGAGGGAAAT+GGG | 0.430226 | 5.1:+55152519 | MS.gene57016:CDS |
CATGTTGAGTGCCTCAGAAA+TGG | 0.430233 | 5.1:+55154755 | MS.gene57016:CDS |
AGGGCATCCCTGATGGTGAT+TGG | 0.430704 | 5.1:+55154518 | MS.gene57016:intron |
ATCTTGGATGGACAATTGAA+TGG | 0.433717 | 5.1:+55153220 | MS.gene57016:CDS |
ATTTGTTCTGTTTGTAACTA+CGG | 0.435651 | 5.1:+55154293 | MS.gene57016:CDS |
GAGGCGGTAACGGTCTAATC+AGG | 0.443329 | 5.1:-55152294 | None:intergenic |
AACTCAATTGGAGGCGGTAA+CGG | 0.443516 | 5.1:-55152304 | None:intergenic |
ATGTGTTGATGTGAAATATC+AGG | 0.443715 | 5.1:+55152354 | MS.gene57016:CDS |
TTTAACTGGAGAAGGTTCAT+TGG | 0.444310 | 5.1:-55153454 | None:intergenic |
GACACATGGACGAATTCCTT+TGG | 0.446181 | 5.1:+55156970 | MS.gene57016:CDS |
CAAACTGAGGGTTGCACTCT+CGG | 0.446284 | 5.1:+55155414 | MS.gene57016:CDS |
GGAAACTCTCCTACGTTTGA+AGG | 0.447090 | 5.1:+55154041 | MS.gene57016:CDS |
CATCATTCCTTTGGTGGATG+AGG | 0.448195 | 5.1:+55152927 | MS.gene57016:CDS |
TAGTCTTCCTTCTTTCAGTT+GGG | 0.448268 | 5.1:-55153617 | None:intergenic |
ACATCAACACATTGTCCAAA+TGG | 0.448928 | 5.1:-55152343 | None:intergenic |
AAGATTTCCATCTCCGGAAT+CGG | 0.449395 | 5.1:+55157086 | MS.gene57016:CDS |
TCTCCACAAGATCAGTGTTT+AGG | 0.452938 | 5.1:+55153651 | MS.gene57016:CDS |
AACTCTGAGACTTGCGGTGT+TGG | 0.458093 | 5.1:+55155355 | MS.gene57016:CDS |
CGATCGCTGCGATGGAATGA+AGG | 0.459419 | 5.1:+55152402 | MS.gene57016:CDS |
GAAGCTAAAGCAACTGGGAG+TGG | 0.459529 | 5.1:+55156912 | MS.gene57016:intron |
AGCCTCAAAATATTCTGTCT+TGG | 0.464847 | 5.1:+55153958 | MS.gene57016:CDS |
GGGTGCTAAGATCAAGCAAA+AGG | 0.464855 | 5.1:+55153904 | MS.gene57016:CDS |
CAGTTGAGGAGTTTGGAAGA+TGG | 0.465345 | 5.1:+55152091 | MS.gene57016:intron |
TCCATATAGATTCTGACAAC+AGG | 0.467354 | 5.1:-55154093 | None:intergenic |
CCGCACAATGATCTGTTTGA+AGG | 0.470390 | 5.1:+55154257 | MS.gene57016:CDS |
GGACAAAACCAATCACCATC+AGG | 0.470956 | 5.1:-55154526 | None:intergenic |
TTACGGTTTCTCTTTGCAGT+TGG | 0.473232 | 5.1:-55153822 | None:intergenic |
TCATGCCGTTGCGGGATTTG+CGG | 0.473499 | 5.1:+55154550 | MS.gene57016:CDS |
TTTCTGGGATCATGGCATCC+AGG | 0.474048 | 5.1:+55152115 | MS.gene57016:CDS |
TTTCACTGAGACTGCAACAT+AGG | 0.475964 | 5.1:-55152578 | None:intergenic |
TCTTCATCTGCTTTAGATTG+TGG | 0.478088 | 5.1:+55152259 | MS.gene57016:CDS |
TAAGAGAAAGTGGAAATTGA+AGG | 0.482244 | 5.1:+55153554 | MS.gene57016:CDS |
GCATACTCATCAATAACTTC+AGG | 0.482703 | 5.1:-55153132 | None:intergenic |
CACAAGCATCATTCCTTTGG+TGG | 0.482854 | 5.1:+55152921 | MS.gene57016:CDS |
CTGTGGAGAAAAGTGTGAAC+AGG | 0.483150 | 5.1:+55154817 | MS.gene57016:CDS |
TTGCTGAAACCATTAGAGAA+TGG | 0.483151 | 5.1:+55152635 | MS.gene57016:CDS |
GCTAATCAAGGTGATGCATT+TGG | 0.484559 | 5.1:+55152817 | MS.gene57016:CDS |
TCTGAGACTTGCGGTGTTGG+CGG | 0.484707 | 5.1:+55155358 | MS.gene57016:CDS |
GTATGATATTAGGATGAGAA+AGG | 0.485431 | 5.1:+55152609 | MS.gene57016:CDS |
ACGATATCTCTGCTGGAGAA+AGG | 0.486182 | 5.1:-55155469 | None:intergenic |
GTGATATTCGATCGCTGCGA+TGG | 0.486249 | 5.1:+55152394 | MS.gene57016:CDS |
ACTGGAGAAGGTTCATTGGT+TGG | 0.487564 | 5.1:-55153450 | None:intergenic |
GAGGACAAACGTTGAAACCT+TGG | 0.487775 | 5.1:-55153428 | None:intergenic |
AACTGAGGATCACTCAGGAT+TGG | 0.488881 | 5.1:+55152479 | MS.gene57016:CDS |
CAATCATCAATGGAGGTTGA+TGG | 0.488960 | 5.1:+55151439 | None:intergenic |
ACTTGAAATTTAACTGGAGA+AGG | 0.489209 | 5.1:-55153462 | None:intergenic |
TTAGGTGATGAAATGAAGGT+TGG | 0.489849 | 5.1:+55152448 | MS.gene57016:CDS |
CTTCGAGTAAATTGTTTGGA+AGG | 0.490329 | 5.1:-55152753 | None:intergenic |
TTCAAAGGCTAGCACACAAA+AGG | 0.490434 | 5.1:+55153857 | MS.gene57016:CDS |
GATTAGCAAAAGAGGAATGA+TGG | 0.492433 | 5.1:+55157428 | MS.gene57016:CDS |
CGATATCTCTGCTGGAGAAA+GGG | 0.492608 | 5.1:-55155468 | None:intergenic |
CATTGTGTTGCCAAAGTACA+AGG | 0.495043 | 5.1:+55153995 | MS.gene57016:CDS |
GTCTTCCACGATATCTCTGC+TGG | 0.495593 | 5.1:-55155476 | None:intergenic |
ACTGAGGATCACTCAGGATT+GGG | 0.495646 | 5.1:+55152480 | MS.gene57016:CDS |
GTTACAACCGATTCCGGAGA+TGG | 0.499267 | 5.1:-55157093 | None:intergenic |
CAGTGTTTAGGCACACTTCA+AGG | 0.501569 | 5.1:+55153663 | MS.gene57016:CDS |
AAACCTTGGCTCATTTGGGG+TGG | 0.502467 | 5.1:-55153414 | None:intergenic |
TACCGCCTCCAATTGAGTTA+CGG | 0.506527 | 5.1:+55152308 | MS.gene57016:CDS |
AGATTTAGGTGATGAAATGA+AGG | 0.508571 | 5.1:+55152444 | MS.gene57016:CDS |
CAAATCCCGCAACGGCATGA+TGG | 0.512668 | 5.1:-55154547 | None:intergenic |
AGCGGCTTTGCAAACCATGC+TGG | 0.514471 | 5.1:+55154119 | MS.gene57016:CDS |
TTTATCCGTAACTCAATTGG+AGG | 0.515632 | 5.1:-55152313 | None:intergenic |
GATGCATTTGGTTCTGACAT+TGG | 0.519331 | 5.1:+55152829 | MS.gene57016:CDS |
TAAGAATTGTCTTAATTTGG+AGG | 0.523841 | 5.1:+55154358 | MS.gene57016:CDS |
GCAGAAGGGATTAGCAAAAG+AGG | 0.524390 | 5.1:+55157420 | MS.gene57016:CDS |
TCATTTCATCACCTAAATCT+GGG | 0.526675 | 5.1:-55152441 | None:intergenic |
TTCTGGGATCATGGCATCCA+GGG | 0.527252 | 5.1:+55152116 | MS.gene57016:CDS |
GAATGGACCAATTCTGATCA+TGG | 0.531149 | 5.1:+55153720 | MS.gene57016:CDS |
CGGTGCTGAAAGTGACTTAG+TGG | 0.531273 | 5.1:+55155378 | MS.gene57016:CDS |
TCTAGCACACCGGGAACAGC+AGG | 0.531932 | 5.1:-55156949 | None:intergenic |
AAGCAGTAACTGCAGACCTT+CGG | 0.532897 | 5.1:+55154145 | MS.gene57016:CDS |
GGTGGATGAGGAATTTGAGA+AGG | 0.533515 | 5.1:+55152939 | MS.gene57016:CDS |
ATCAAGCAAAAGGGTGCAGA+AGG | 0.536140 | 5.1:+55153914 | MS.gene57016:CDS |
TTTAATGGATGAGCTCGAAA+AGG | 0.537315 | 5.1:+55156644 | MS.gene57016:CDS |
GAAAGATTGCTGTCAATTTG+AGG | 0.537617 | 5.1:-55153375 | None:intergenic |
GGCTAGCACACAAAAGGACT+TGG | 0.541081 | 5.1:+55153863 | MS.gene57016:CDS |
GGATAATCTAACTTGGACAT+TGG | 0.541497 | 5.1:+55155321 | MS.gene57016:CDS |
AACATCTGTTAGCAGAAGGA+TGG | 0.542192 | 5.1:+55153583 | MS.gene57016:CDS |
AACCAACAAGTTTGAGGAGT+CGG | 0.543763 | 5.1:-55152878 | None:intergenic |
AGATTTCAGTACAGACGACT+TGG | 0.545529 | 5.1:+55156609 | MS.gene57016:CDS |
GTTGACAAGATTTCCATCTC+CGG | 0.546423 | 5.1:+55157080 | MS.gene57016:CDS |
TATCAGGATGCTTGGTGGGA+AGG | 0.546580 | 5.1:+55152370 | MS.gene57016:CDS |
ATCAGATTATCTTATTGAAG+TGG | 0.547552 | 5.1:+55152204 | MS.gene57016:CDS |
CTGAGAATTGGTTACCAAGA+GGG | 0.550005 | 5.1:+55152512 | MS.gene57016:CDS |
TTGTTTGGAAGGTTTAAGGC+GGG | 0.550395 | 5.1:-55152742 | None:intergenic |
GTTTATCCGGAGACTTGTAC+CGG | 0.551483 | 5.1:-55153275 | None:intergenic |
TCACAATGAACATTATCAGT+TGG | 0.551724 | 5.1:-55152790 | None:intergenic |
ACTCGGCTGATAAGAGAAAG+TGG | 0.552574 | 5.1:+55153544 | MS.gene57016:CDS |
AGTTACTGCTTCCACCAGCA+TGG | 0.554079 | 5.1:-55154133 | None:intergenic |
ACGATACCGGTACAAGTCTC+CGG | 0.556383 | 5.1:+55153269 | MS.gene57016:CDS |
AATCTGATTCTTCATCATCA+AGG | 0.558197 | 5.1:-55152189 | None:intergenic |
GTCCATGTGTCTAGCACACC+GGG | 0.558868 | 5.1:-55156958 | None:intergenic |
TTCCCGGTGTGCTAGACACA+TGG | 0.559676 | 5.1:+55156956 | MS.gene57016:CDS |
CATTGTGATGCTGCTAATCA+AGG | 0.559978 | 5.1:+55152805 | MS.gene57016:CDS |
ATCCGTAACTCAATTGGAGG+CGG | 0.563021 | 5.1:-55152310 | None:intergenic |
CATGTGTAGGGCATCCCTGA+TGG | 0.563743 | 5.1:+55154511 | MS.gene57016:intron |
CTTGTAATGTGAAGGAATTG+TGG | 0.565605 | 5.1:+55152659 | MS.gene57016:CDS |
GTGCCTAAACACTGATCTTG+TGG | 0.566474 | 5.1:-55153654 | None:intergenic |
CTCAATCGACTAAACTTCCA+GGG | 0.567209 | 5.1:+55156379 | MS.gene57016:CDS |
TCAACTTCAGACAGTTCCAA+AGG | 0.567236 | 5.1:-55153102 | None:intergenic |
TTGACTACCCAACTGAAAGA+AGG | 0.567692 | 5.1:+55153610 | MS.gene57016:CDS |
AGATTATCTTATTGAAGTGG+TGG | 0.568142 | 5.1:+55152207 | MS.gene57016:CDS |
GCTGCGATGGAATGAAGGAT+AGG | 0.569938 | 5.1:+55152407 | MS.gene57016:CDS |
TGACAGTTCCTTGAAAGTCC+AGG | 0.570491 | 5.1:-55157044 | None:intergenic |
GGCTAGTCCAGTATCTGAAG+TGG | 0.575225 | 5.1:+55157392 | MS.gene57016:CDS |
CGTCCATGTGTCTAGCACAC+CGG | 0.577703 | 5.1:-55156959 | None:intergenic |
GTTGTTTGAGGAGTGTGAGA+GGG | 0.580067 | 5.1:+55152552 | MS.gene57016:CDS |
GTGGAGAGACCTTGTTGTTG+AGG | 0.580199 | 5.1:+55152678 | MS.gene57016:CDS |
AGTTGTTTGAGGAGTGTGAG+AGG | 0.580570 | 5.1:+55152551 | MS.gene57016:CDS |
GAAACTCTCCTACGTTTGAA+GGG | 0.580720 | 5.1:+55154042 | MS.gene57016:CDS |
CTTCCAAACAATTTACTCGA+AGG | 0.580721 | 5.1:+55152754 | MS.gene57016:CDS |
AAAATTGAAGAGACTGAGGA+TGG | 0.580746 | 5.1:+55154580 | MS.gene57016:CDS |
GGTGCTAAGATCAAGCAAAA+GGG | 0.582290 | 5.1:+55153905 | MS.gene57016:CDS |
TGGAATATCTGATAAGCTTG+AGG | 0.582726 | 5.1:+55152849 | MS.gene57016:CDS |
CCGGAATCGGTTGTAACAAG+AGG | 0.584259 | 5.1:+55157099 | MS.gene57016:CDS |
GAAGTACAGTATAGAAACCC+TGG | 0.584288 | 5.1:-55156396 | None:intergenic |
CATCAGAAGCTAAAGCAACT+GGG | 0.584545 | 5.1:+55156907 | MS.gene57016:intron |
AGAATGGACTTGTAATGTGA+AGG | 0.585059 | 5.1:+55152651 | MS.gene57016:CDS |
GGAGAAGGTTCATTGGTTGG+AGG | 0.585791 | 5.1:-55153447 | None:intergenic |
GAGGATCCTAACATGAACTC+TGG | 0.588083 | 5.1:+55153348 | MS.gene57016:CDS |
CGTCATCTGCTCAAAACCAA+AGG | 0.588282 | 5.1:-55156986 | None:intergenic |
ACACAGGACAAGAGAAATCA+CGG | 0.589286 | 5.1:+55154229 | MS.gene57016:CDS |
ATGTGAAATATCAGGATGCT+TGG | 0.590726 | 5.1:+55152362 | MS.gene57016:CDS |
TCAAATTCCTCATCCACCAA+AGG | 0.592996 | 5.1:-55152934 | None:intergenic |
TTGAAACCTTGGCTCATTTG+GGG | 0.593251 | 5.1:-55153417 | None:intergenic |
GTTATTGATGAGTATGCACT+TGG | 0.594005 | 5.1:+55153138 | MS.gene57016:CDS |
GAAATATCAGGATGCTTGGT+GGG | 0.594887 | 5.1:+55152366 | MS.gene57016:CDS |
GGCGAACTTCGCTTAATGTG+AGG | 0.596695 | 5.1:-55152720 | None:intergenic |
TTTATGCGACCAATGCCCCT+CGG | 0.597093 | 5.1:+55154328 | MS.gene57016:CDS |
GCGAACTTCGCTTAATGTGA+GGG | 0.597250 | 5.1:-55152719 | None:intergenic |
CTCCTCCACATAGACGATAC+CGG | 0.598432 | 5.1:+55153256 | MS.gene57016:CDS |
AAGACGTTATATTCAACCAA+AGG | 0.598551 | 5.1:+55155494 | MS.gene57016:CDS |
ATGAGTATGCACTTGGATGT+AGG | 0.598658 | 5.1:+55153145 | MS.gene57016:CDS |
TGAAATATCAGGATGCTTGG+TGG | 0.599189 | 5.1:+55152365 | MS.gene57016:CDS |
AAATGAAGAATTGATTAGTG+TGG | 0.601220 | 5.1:+55156426 | MS.gene57016:CDS |
TCTGAAGTGGATCAAGCAGA+AGG | 0.601234 | 5.1:+55157405 | MS.gene57016:CDS |
CAGGGAAAATTATCCGCTGT+GGG | 0.601586 | 5.1:+55152134 | MS.gene57016:CDS |
TAGTATTTCACGATGGCAAG+AGG | 0.605840 | 5.1:-55153501 | None:intergenic |
TTTCTCCAGCAGAGATATCG+TGG | 0.610852 | 5.1:+55155471 | MS.gene57016:CDS |
TTGTACCGGTATCGTCTATG+TGG | 0.615054 | 5.1:-55153261 | None:intergenic |
CCAGGGAAAATTATCCGCTG+TGG | 0.615566 | 5.1:+55152133 | MS.gene57016:CDS |
TAAACGCACAAGGACTTCAA+AGG | 0.618492 | 5.1:+55153842 | MS.gene57016:CDS |
TACCGGTATCGTCTATGTGG+AGG | 0.619310 | 5.1:-55153258 | None:intergenic |
GCTGGAGAAAGGGTTATGCA+GGG | 0.620095 | 5.1:-55155458 | None:intergenic |
TTTGGCCGCAAATCCCGCAA+CGG | 0.620748 | 5.1:-55154555 | None:intergenic |
TGGAGAGTGAAGTACTTACA+CGG | 0.621239 | 5.1:+55153883 | MS.gene57016:CDS |
GGTCACTGTTAGATTGCATG+AGG | 0.622465 | 5.1:+55154192 | MS.gene57016:CDS |
CACCAATTACCTCAACAACA+AGG | 0.625256 | 5.1:-55152687 | None:intergenic |
CTGAAGTGGATCAAGCAGAA+GGG | 0.627799 | 5.1:+55157406 | MS.gene57016:CDS |
GGCTTTGCAAACCATGCTGG+TGG | 0.632141 | 5.1:+55154122 | MS.gene57016:CDS |
CAATTCTTATGATACGCCGA+GGG | 0.635929 | 5.1:-55154344 | None:intergenic |
TGTTTGGAAGGTTTAAGGCG+GGG | 0.636113 | 5.1:-55152741 | None:intergenic |
GGAAAATTATCCGCTGTGGG+AGG | 0.637624 | 5.1:+55152137 | MS.gene57016:CDS |
CTGAAATCTGGTACCTACGA+GGG | 0.639712 | 5.1:-55156595 | None:intergenic |
TGCTGAAAGTGACTTAGTGG+TGG | 0.640746 | 5.1:+55155381 | MS.gene57016:CDS |
AAATAAAATTGAAGAGACTG+AGG | 0.641739 | 5.1:+55154576 | MS.gene57016:CDS |
ACTCTCCTACGTTTGAAGGG+AGG | 0.642713 | 5.1:+55154045 | MS.gene57016:CDS |
AGAGAAACCGTAAACGCACA+AGG | 0.642907 | 5.1:+55153832 | MS.gene57016:CDS |
GTTATCCTCCCTTCAAACGT+AGG | 0.643744 | 5.1:-55154050 | None:intergenic |
ATAGCAGAAGTGCCCCTCGT+AGG | 0.645166 | 5.1:+55156582 | MS.gene57016:CDS |
CCTTCAAACAGATCATTGTG+CGG | 0.646292 | 5.1:-55154257 | None:intergenic |
GATCCACCCCAAATGAGCCA+AGG | 0.648744 | 5.1:+55153411 | MS.gene57016:CDS |
GACAAAACCAATCACCATCA+GGG | 0.650816 | 5.1:-55154525 | None:intergenic |
GGTGGATGTGGAATTTGAGA+AGG | 0.651302 | 5.1:+55153005 | MS.gene57016:CDS |
TTAAAGAAAAGATTCCCGAA+TGG | 0.651679 | 5.1:+55153703 | MS.gene57016:CDS |
CTGGAGAAAGGGTTATGCAG+GGG | 0.652854 | 5.1:-55155457 | None:intergenic |
ATTGTTTGGAAGGTTTAAGG+CGG | 0.652953 | 5.1:-55152743 | None:intergenic |
GGAGAATTACAGCAAACTGA+GGG | 0.660930 | 5.1:+55155402 | MS.gene57016:CDS |
TAAACAACTGAGGATCACTC+AGG | 0.664286 | 5.1:+55152474 | MS.gene57016:CDS |
ACAATTCTTATGATACGCCG+AGG | 0.669642 | 5.1:-55154345 | None:intergenic |
GGAGAGTGAAGTACTTACAC+GGG | 0.674806 | 5.1:+55153884 | MS.gene57016:CDS |
TGAAATCTGGTACCTACGAG+GGG | 0.676014 | 5.1:-55156594 | None:intergenic |
TGTTCTGTTTGTAACTACGG+TGG | 0.676365 | 5.1:+55154296 | MS.gene57016:CDS |
ACTGAGAATTGGTTACCAAG+AGG | 0.676963 | 5.1:+55152511 | MS.gene57016:CDS |
TTAGATTGTGGCTATCAGCG+AGG | 0.682175 | 5.1:+55152271 | MS.gene57016:CDS |
ACTTGGATGTAGGAGCAAGA+CGG | 0.682568 | 5.1:+55153155 | MS.gene57016:CDS |
CGAGCTCATCCATTAAAACG+CGG | 0.682582 | 5.1:-55156638 | None:intergenic |
GAAGGGAGGATAACTCGCGA+AGG | 0.688944 | 5.1:+55154059 | MS.gene57016:CDS |
TGGAGAATTACAGCAAACTG+AGG | 0.690282 | 5.1:+55155401 | MS.gene57016:CDS |
GGGAAGTAATGCAAGAACAC+AGG | 0.693904 | 5.1:+55154213 | MS.gene57016:CDS |
GTCACTGTTAGATTGCATGA+GGG | 0.696628 | 5.1:+55154193 | MS.gene57016:CDS |
CAGAATCTATATGGACTCAG+CGG | 0.703933 | 5.1:+55154101 | MS.gene57016:CDS |
AGATTGCTGTCAATTTGAGG+TGG | 0.705765 | 5.1:-55153372 | None:intergenic |
TGATTAGTGTGGCGACTGTG+AGG | 0.707183 | 5.1:+55156437 | MS.gene57016:CDS |
TCACTCATTAGAGAGAAACT+CGG | 0.709740 | 5.1:+55153527 | MS.gene57016:CDS |
TTGGTTACTGATCAAAACTG+TGG | 0.709900 | 5.1:+55152895 | MS.gene57016:CDS |
TATGTCAACTCTGAGACTTG+CGG | 0.721346 | 5.1:+55155349 | MS.gene57016:CDS |
AGGTTGGAGTTAAACAACTG+AGG | 0.726333 | 5.1:+55152464 | MS.gene57016:CDS |
AATTCTTATGATACGCCGAG+GGG | 0.728497 | 5.1:-55154343 | None:intergenic |
ACTGAAATCTGGTACCTACG+AGG | 0.735704 | 5.1:-55156596 | None:intergenic |
AACGCGTCTTCCTCCCACAG+CGG | 0.747933 | 5.1:-55152147 | None:intergenic |
GTGACAGTAGTATTTCACGA+TGG | 0.759670 | 5.1:-55153508 | None:intergenic |
TGGACCAATTCTGATCATGG+TGG | 0.790764 | 5.1:+55153723 | MS.gene57016:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAAAGATTTGATTTTTATT+TGG | + | chr5.1:55151587-55151606 | MS.gene57016:intron | 10.0% |
!!! | ATGTAAAATTAATTTTGAAA+AGG | + | chr5.1:55157371-55157390 | MS.gene57016:CDS | 10.0% |
!! | AAAAACAATTGTTAACAAAA+TGG | - | chr5.1:55151972-55151991 | None:intergenic | 15.0% |
!! | AAATGATAAACATAAATTGA+AGG | - | chr5.1:55155534-55155553 | None:intergenic | 15.0% |
!! | ATCTTCAAATAAATATGTTA+CGG | - | chr5.1:55155878-55155897 | None:intergenic | 15.0% |
!! | TGAAAATATATCAAAACTTA+TGG | + | chr5.1:55156800-55156819 | MS.gene57016:intron | 15.0% |
!! | TTAATATGTTATGATTGAAA+AGG | - | chr5.1:55154402-55154421 | None:intergenic | 15.0% |
!! | TTATAAAAAATTCTTTCAAG+TGG | - | chr5.1:55152049-55152068 | None:intergenic | 15.0% |
!! | TTCTAAACTAGAATAAAAAA+GGG | - | chr5.1:55154859-55154878 | None:intergenic | 15.0% |
!! | TTTCTAAACTAGAATAAAAA+AGG | - | chr5.1:55154860-55154879 | None:intergenic | 15.0% |
!!! | TATTTTAGATTATCTTGATA+TGG | + | chr5.1:55156717-55156736 | MS.gene57016:intron | 15.0% |
!!! | TCATTTTTTTTAGGATATTT+GGG | + | chr5.1:55156553-55156572 | MS.gene57016:intron | 15.0% |
!!! | TTCATTTTTTTTAGGATATT+TGG | + | chr5.1:55156552-55156571 | MS.gene57016:intron | 15.0% |
!!! | TTGAGTATTTATTACAATTT+TGG | + | chr5.1:55156033-55156052 | MS.gene57016:intron | 15.0% |
!! | AACAAATACAATCTAAACTA+AGG | - | chr5.1:55156203-55156222 | None:intergenic | 20.0% |
!! | AATATATCAAAACTTATGGT+AGG | + | chr5.1:55156804-55156823 | MS.gene57016:intron | 20.0% |
!! | AATATGATAGATACTGTTTA+TGG | + | chr5.1:55151902-55151921 | MS.gene57016:intron | 20.0% |
!! | AATCAGATAAAAATCGAAAA+CGG | + | chr5.1:55153052-55153071 | MS.gene57016:CDS | 20.0% |
!! | ATATCCATTAGAATCATATT+TGG | - | chr5.1:55156068-55156087 | None:intergenic | 20.0% |
!! | CCAATACATGAATAATAAAA+AGG | - | chr5.1:55157131-55157150 | None:intergenic | 20.0% |
!! | GAATGATTATTGAAAAGATA+TGG | + | chr5.1:55156752-55156771 | MS.gene57016:intron | 20.0% |
!! | TATCATTTGAATATATGCTT+AGG | - | chr5.1:55156778-55156797 | None:intergenic | 20.0% |
!! | TATGAAAACAAAAATCATAC+AGG | - | chr5.1:55151807-55151826 | None:intergenic | 20.0% |
!! | TCATAAGAATTGTCTTAATT+TGG | + | chr5.1:55154355-55154374 | MS.gene57016:CDS | 20.0% |
!! | TCTGCAATATGAAAAAAATA+AGG | - | chr5.1:55157312-55157331 | None:intergenic | 20.0% |
!! | TGAATCAGATAAAAATCAAA+TGG | + | chr5.1:55152984-55153003 | MS.gene57016:CDS | 20.0% |
!! | TTATTTGGTTATGAATTTCT+GGG | + | chr5.1:55151602-55151621 | MS.gene57016:intron | 20.0% |
!! | TTTATTTGGTTATGAATTTC+TGG | + | chr5.1:55151601-55151620 | MS.gene57016:intron | 20.0% |
!!! | AAATAGTAGAGTTTGTTTTT+AGG | - | chr5.1:55155746-55155765 | None:intergenic | 20.0% |
!!! | ATAAAGTTTGTCATTTTATC+AGG | + | chr5.1:55156680-55156699 | MS.gene57016:intron | 20.0% |
!!! | CATTTTTTTTAGGATATTTG+GGG | + | chr5.1:55156554-55156573 | MS.gene57016:intron | 20.0% |
!!! | CCTTTTTATTATTCATGTAT+TGG | + | chr5.1:55157128-55157147 | MS.gene57016:intron | 20.0% |
! | AAAAATGAAATGCCAAGTTA+TGG | - | chr5.1:55156541-55156560 | None:intergenic | 25.0% |
! | AAAATCGAAGTGTAAAACTT+TGG | - | chr5.1:55153306-55153325 | None:intergenic | 25.0% |
! | AAATAAAATTGAAGAGACTG+AGG | + | chr5.1:55154576-55154595 | MS.gene57016:CDS | 25.0% |
! | AAATGAAGAATTGATTAGTG+TGG | + | chr5.1:55156426-55156445 | MS.gene57016:CDS | 25.0% |
! | AACTTTGGATTAAGTTTATC+CGG | - | chr5.1:55153291-55153310 | None:intergenic | 25.0% |
! | AATAATCATTCGAATGTCAT+AGG | - | chr5.1:55156743-55156762 | None:intergenic | 25.0% |
! | ACTTATGTTAAATGTAGCAT+TGG | - | chr5.1:55156832-55156851 | None:intergenic | 25.0% |
! | ATCAGATAAAAATCAAATGG+TGG | + | chr5.1:55152987-55153006 | MS.gene57016:CDS | 25.0% |
! | ATCAGATTATCTTATTGAAG+TGG | + | chr5.1:55152204-55152223 | MS.gene57016:CDS | 25.0% |
! | ATGCAGAATGAAACTTAATA+TGG | - | chr5.1:55154494-55154513 | None:intergenic | 25.0% |
! | ATTTGTTCTGTTTGTAACTA+CGG | + | chr5.1:55154293-55154312 | MS.gene57016:CDS | 25.0% |
! | CAAGACGATATATGAAAAAT+TGG | + | chr5.1:55154792-55154811 | MS.gene57016:CDS | 25.0% |
! | CAGAATTACAAGAAAATCAA+AGG | - | chr5.1:55151747-55151766 | None:intergenic | 25.0% |
! | CAGTATATATTTAAGTCACA+GGG | - | chr5.1:55155190-55155209 | None:intergenic | 25.0% |
! | GAAATGCGTACATAAAAATA+AGG | - | chr5.1:55155917-55155936 | None:intergenic | 25.0% |
! | GCATAGATATGTTAGAATTT+AGG | + | chr5.1:55155775-55155794 | MS.gene57016:intron | 25.0% |
! | GTAAATGTAGAGTAAAACAA+TGG | - | chr5.1:55155232-55155251 | None:intergenic | 25.0% |
! | TAAACTAGAATAAAAAAGGG+AGG | - | chr5.1:55154856-55154875 | None:intergenic | 25.0% |
! | TAAATTGTTTGGAAGGTTTA+AGG | - | chr5.1:55152749-55152768 | None:intergenic | 25.0% |
! | TGATCCAAATATGATTCTAA+TGG | + | chr5.1:55156061-55156080 | MS.gene57016:intron | 25.0% |
! | TGTGAATATAACAATAATGC+AGG | - | chr5.1:55156312-55156331 | None:intergenic | 25.0% |
! | TGTTTAATTACGTGCATATT+TGG | - | chr5.1:55157265-55157284 | None:intergenic | 25.0% |
! | TTATTCTGATTTACATTCGT+TGG | + | chr5.1:55154924-55154943 | MS.gene57016:intron | 25.0% |
! | TTGTTGCATATATAGTGTTA+GGG | + | chr5.1:55155805-55155824 | MS.gene57016:intron | 25.0% |
! | TTTGTGATTTGATGTTCTTA+GGG | + | chr5.1:55151645-55151664 | MS.gene57016:intron | 25.0% |
! | TTTGTTGCATATATAGTGTT+AGG | + | chr5.1:55155804-55155823 | MS.gene57016:intron | 25.0% |
!! | AAAGTACTAAGTGTTTGAAT+TGG | - | chr5.1:55155001-55155020 | None:intergenic | 25.0% |
!! | AACAGATTTGGTATGATATT+AGG | + | chr5.1:55152599-55152618 | MS.gene57016:CDS | 25.0% |
!! | AGAAAACATCTTGTTTATCT+TGG | + | chr5.1:55153204-55153223 | MS.gene57016:CDS | 25.0% |
!! | AGTTACTAAAATTTTGCAAG+AGG | + | chr5.1:55153329-55153348 | MS.gene57016:CDS | 25.0% |
!! | ATAGATTTTGCACAATAAGT+TGG | - | chr5.1:55155947-55155966 | None:intergenic | 25.0% |
!! | TAAGAATTGTCTTAATTTGG+AGG | + | chr5.1:55154358-55154377 | MS.gene57016:CDS | 25.0% |
!! | TTTTGTGATTTGATGTTCTT+AGG | + | chr5.1:55151644-55151663 | MS.gene57016:intron | 25.0% |
!!! | AAATGGAAAAGTGTTGATAA+AGG | - | chr5.1:55151955-55151974 | None:intergenic | 25.0% |
!!! | AAGTTACCATTTTGTTGTTT+TGG | - | chr5.1:55157342-55157361 | None:intergenic | 25.0% |
!!! | CAGTCTCTTCAATTTTATTT+TGG | - | chr5.1:55154576-55154595 | None:intergenic | 25.0% |
!!! | CTTGGCATTTCATTTTTTTT+AGG | + | chr5.1:55156544-55156563 | MS.gene57016:intron | 25.0% |
!!! | GTAATTCTGTTGTTGATTTA+TGG | + | chr5.1:55151758-55151777 | MS.gene57016:intron | 25.0% |
!!! | TATATGAAAAATTGGTTCTG+TGG | + | chr5.1:55154800-55154819 | MS.gene57016:CDS | 25.0% |
!!! | TCTCATTTTTCATGAAGAAT+TGG | + | chr5.1:55154888-55154907 | MS.gene57016:intron | 25.0% |
!!! | TCTTTTTTGATCAAACAAGA+TGG | + | chr5.1:55156122-55156141 | MS.gene57016:intron | 25.0% |
!!! | TTTTTTCAACTTTTCAGTTG+AGG | + | chr5.1:55152077-55152096 | MS.gene57016:intron | 25.0% |
AAAAAACATCTGTTAGCAGA+AGG | + | chr5.1:55153579-55153598 | MS.gene57016:CDS | 30.0% | |
AAAAAGAATCTAAGCACAGA+AGG | - | chr5.1:55156109-55156128 | None:intergenic | 30.0% | |
AAGACGTTATATTCAACCAA+AGG | + | chr5.1:55155494-55155513 | MS.gene57016:CDS | 30.0% | |
AATCTGATTCTTCATCATCA+AGG | - | chr5.1:55152192-55152211 | None:intergenic | 30.0% | |
ACTTGAAATTTAACTGGAGA+AGG | - | chr5.1:55153465-55153484 | None:intergenic | 30.0% | |
AGATTATCTTATTGAAGTGG+TGG | + | chr5.1:55152207-55152226 | MS.gene57016:CDS | 30.0% | |
AGATTTAGGTGATGAAATGA+AGG | + | chr5.1:55152444-55152463 | MS.gene57016:CDS | 30.0% | |
ATATTAACACCATGGTGTAA+TGG | - | chr5.1:55155672-55155691 | None:intergenic | 30.0% | |
ATCATGGTTGCATCTATTAA+TGG | + | chr5.1:55155049-55155068 | MS.gene57016:intron | 30.0% | |
ATTACAAGTCCATTCTCTAA+TGG | - | chr5.1:55152647-55152666 | None:intergenic | 30.0% | |
ATTTCATGCAAGTGATGAAT+TGG | + | chr5.1:55151878-55151897 | MS.gene57016:intron | 30.0% | |
CAAACTAAAACACATCACAA+AGG | - | chr5.1:55154681-55154700 | None:intergenic | 30.0% | |
GCAGTATATATTTAAGTCAC+AGG | - | chr5.1:55155191-55155210 | None:intergenic | 30.0% | |
GGTTCAACTTGAAATTTAAC+TGG | - | chr5.1:55153471-55153490 | None:intergenic | 30.0% | |
GTATGATATTAGGATGAGAA+AGG | + | chr5.1:55152609-55152628 | MS.gene57016:CDS | 30.0% | |
TAAAACACATCACAAAGGAA+TGG | - | chr5.1:55154676-55154695 | None:intergenic | 30.0% | |
TAAGAGAAAGTGGAAATTGA+AGG | + | chr5.1:55153554-55153573 | MS.gene57016:CDS | 30.0% | |
TAATTAAACAGTTTCCTCAC+TGG | + | chr5.1:55157275-55157294 | MS.gene57016:intron | 30.0% | |
TACATGGAAACAAAAAGGAA+AGG | - | chr5.1:55154447-55154466 | None:intergenic | 30.0% | |
TCACAATGAACATTATCAGT+TGG | - | chr5.1:55152793-55152812 | None:intergenic | 30.0% | |
TCATTTCATCACCTAAATCT+GGG | - | chr5.1:55152444-55152463 | None:intergenic | 30.0% | |
TCTTGTCAATGAAAAAGTTG+AGG | + | chr5.1:55151519-55151538 | MS.gene57016:CDS | 30.0% | |
TTAAAGAAAAGATTCCCGAA+TGG | + | chr5.1:55153703-55153722 | MS.gene57016:CDS | 30.0% | |
TTAACAAATCCATCAGTGAA+TGG | - | chr5.1:55156244-55156263 | None:intergenic | 30.0% | |
TTACCTGAATATTAACACCA+TGG | - | chr5.1:55155680-55155699 | None:intergenic | 30.0% | |
TTCAAAAATATACAAGCCGA+AGG | - | chr5.1:55154164-55154183 | None:intergenic | 30.0% | |
TTCATTTCATCACCTAAATC+TGG | - | chr5.1:55152445-55152464 | None:intergenic | 30.0% | |
TTTCATGCAAGTGATGAATT+GGG | + | chr5.1:55151879-55151898 | MS.gene57016:intron | 30.0% | |
! | AAAGTACAAGGTCTTTTACT+GGG | + | chr5.1:55154007-55154026 | MS.gene57016:CDS | 30.0% |
! | AACATCTTGTTTATCTTGGA+TGG | + | chr5.1:55153208-55153227 | MS.gene57016:CDS | 30.0% |
! | AACCAAGACAGAATATTTTG+AGG | - | chr5.1:55153963-55153982 | None:intergenic | 30.0% |
! | ACAGATTTAAGTTTGATGCT+AGG | + | chr5.1:55155151-55155170 | MS.gene57016:intron | 30.0% |
! | AGATACTGTTTATGGTAATG+TGG | + | chr5.1:55151910-55151929 | MS.gene57016:intron | 30.0% |
! | ATGTGTTGATGTGAAATATC+AGG | + | chr5.1:55152354-55152373 | MS.gene57016:CDS | 30.0% |
! | ATTCGGGAATCTTTTCTTTA+AGG | - | chr5.1:55153704-55153723 | None:intergenic | 30.0% |
! | CAATCTAAACTAAGGTTTTG+AGG | - | chr5.1:55156195-55156214 | None:intergenic | 30.0% |
! | CAGATTTAAGTTTGATGCTA+GGG | + | chr5.1:55155152-55155171 | MS.gene57016:intron | 30.0% |
! | GAGGAGTAAACAAAGTATTT+CGG | + | chr5.1:55156004-55156023 | MS.gene57016:intron | 30.0% |
! | GAGTTGAAGACATTTTTCAT+TGG | - | chr5.1:55154726-55154745 | None:intergenic | 30.0% |
!! | CATTTCAAGTTTCCATAACT+TGG | + | chr5.1:55156526-55156545 | MS.gene57016:intron | 30.0% |
!! | GATGTTTCTAATGTTTTGGA+TGG | + | chr5.1:55152229-55152248 | MS.gene57016:CDS | 30.0% |
!! | GCTTGTATATTTTTGAAGGA+TGG | + | chr5.1:55154167-55154186 | MS.gene57016:CDS | 30.0% |
!! | GTATATTTTTGAAGGATGGT+AGG | + | chr5.1:55154171-55154190 | MS.gene57016:CDS | 30.0% |
!! | GTGATAATGGAAATCGAAAA+AGG | + | chr5.1:55151470-55151489 | MS.gene57016:CDS | 30.0% |
!! | TAAAAATCAAATGGTGGATG+TGG | + | chr5.1:55152993-55153012 | MS.gene57016:CDS | 30.0% |
!! | TTCGGCTTGTATATTTTTGA+AGG | + | chr5.1:55154163-55154182 | MS.gene57016:CDS | 30.0% |
!! | TTGTTGATTTATGGTTTCGA+TGG | + | chr5.1:55151767-55151786 | MS.gene57016:intron | 30.0% |
!!! | AATGCATGATTTTTGGTGAT+TGG | + | chr5.1:55155103-55155122 | MS.gene57016:intron | 30.0% |
!!! | GGAGTAGTTAGTTTTGATAA+AGG | - | chr5.1:55154974-55154993 | None:intergenic | 30.0% |
!!! | TTTCTTGTTTTACGCTGTTT+TGG | + | chr5.1:55151855-55151874 | MS.gene57016:intron | 30.0% |
!!! | TTTTGAGGTGCAAACATATT+TGG | - | chr5.1:55156180-55156199 | None:intergenic | 30.0% |
AAAATTGAAGAGACTGAGGA+TGG | + | chr5.1:55154580-55154599 | MS.gene57016:CDS | 35.0% | |
AAAGTACATACATCAGCCAT+TGG | - | chr5.1:55156340-55156359 | None:intergenic | 35.0% | |
AAGTTTCATTCTGCATGTGT+AGG | + | chr5.1:55154498-55154517 | MS.gene57016:intron | 35.0% | |
AATGGCTGATGTATGTACTT+TGG | + | chr5.1:55156339-55156358 | MS.gene57016:intron | 35.0% | |
ACATCAACACATTGTCCAAA+TGG | - | chr5.1:55152346-55152365 | None:intergenic | 35.0% | |
ACCTGTTGTCAGAATCTATA+TGG | + | chr5.1:55154092-55154111 | MS.gene57016:CDS | 35.0% | |
ACTAGAATAAAAAAGGGAGG+TGG | - | chr5.1:55154853-55154872 | None:intergenic | 35.0% | |
ACTGAATTGAAGGAGTTACA+TGG | - | chr5.1:55154463-55154482 | None:intergenic | 35.0% | |
AGCATATTCTTCCCAGATTT+AGG | + | chr5.1:55152430-55152449 | MS.gene57016:CDS | 35.0% | |
AGCCTCAAAATATTCTGTCT+TGG | + | chr5.1:55153958-55153977 | MS.gene57016:CDS | 35.0% | |
AGTTTCATTCTGCATGTGTA+GGG | + | chr5.1:55154499-55154518 | MS.gene57016:intron | 35.0% | |
AGTTTGGCATAATCACAATG+TGG | + | chr5.1:55157156-55157175 | MS.gene57016:intron | 35.0% | |
ATACATGCATGTTGTGTGAA+TGG | + | chr5.1:55152001-55152020 | MS.gene57016:intron | 35.0% | |
ATCAGTAACCAACAAGTTTG+AGG | - | chr5.1:55152887-55152906 | None:intergenic | 35.0% | |
ATCTTGGATGGACAATTGAA+TGG | + | chr5.1:55153220-55153239 | MS.gene57016:CDS | 35.0% | |
ATGATCAGAATTGGTCCATT+CGG | - | chr5.1:55153721-55153740 | None:intergenic | 35.0% | |
ATGTGAAATATCAGGATGCT+TGG | + | chr5.1:55152362-55152381 | MS.gene57016:CDS | 35.0% | |
ATGTTCTTAGGGTTTCTTAG+AGG | + | chr5.1:55151656-55151675 | MS.gene57016:intron | 35.0% | |
ATTGTTTGGAAGGTTTAAGG+CGG | - | chr5.1:55152746-55152765 | None:intergenic | 35.0% | |
CAGTAAAAGACCTTGTACTT+TGG | - | chr5.1:55154008-55154027 | None:intergenic | 35.0% | |
CCATCTATAGTACGTAATTC+AGG | - | chr5.1:55153795-55153814 | None:intergenic | 35.0% | |
CCTGAATTACGTACTATAGA+TGG | + | chr5.1:55153792-55153811 | MS.gene57016:CDS | 35.0% | |
CTAAGTGTTTGAATTGGATG+TGG | - | chr5.1:55154995-55155014 | None:intergenic | 35.0% | |
CTAATCATGATGCCATCTAT+AGG | - | chr5.1:55155971-55155990 | None:intergenic | 35.0% | |
CTGAATAAAGAGCTCATTGT+TGG | - | chr5.1:55155029-55155048 | None:intergenic | 35.0% | |
CTTCCAAACAATTTACTCGA+AGG | + | chr5.1:55152754-55152773 | MS.gene57016:CDS | 35.0% | |
CTTCGAGTAAATTGTTTGGA+AGG | - | chr5.1:55152756-55152775 | None:intergenic | 35.0% | |
CTTGTAATGTGAAGGAATTG+TGG | + | chr5.1:55152659-55152678 | MS.gene57016:CDS | 35.0% | |
GAAAGATTGCTGTCAATTTG+AGG | - | chr5.1:55153378-55153397 | None:intergenic | 35.0% | |
GATGGTGATAAGAGTGATAA+TGG | + | chr5.1:55151457-55151476 | MS.gene57016:CDS | 35.0% | |
GATTAGCAAAAGAGGAATGA+TGG | + | chr5.1:55157428-55157447 | MS.gene57016:CDS | 35.0% | |
GCAAAATCTATGCCTATAGA+TGG | + | chr5.1:55155956-55155975 | MS.gene57016:intron | 35.0% | |
GCATACTCATCAATAACTTC+AGG | - | chr5.1:55153135-55153154 | None:intergenic | 35.0% | |
GGAAAAAGGCTCAAAATTGA+AGG | - | chr5.1:55155651-55155670 | None:intergenic | 35.0% | |
GGAAATCGAAAAAGGAAAAG+AGG | + | chr5.1:55151478-55151497 | MS.gene57016:CDS | 35.0% | |
GGAGTTACATGGAAACAAAA+AGG | - | chr5.1:55154452-55154471 | None:intergenic | 35.0% | |
GGATAAGAATGTCTAACCTT+TGG | - | chr5.1:55155513-55155532 | None:intergenic | 35.0% | |
GGATAATCTAACTTGGACAT+TGG | + | chr5.1:55155321-55155340 | MS.gene57016:CDS | 35.0% | |
GTTATTGATGAGTATGCACT+TGG | + | chr5.1:55153138-55153157 | MS.gene57016:CDS | 35.0% | |
TACGTGCATATTTGGATTGT+CGG | - | chr5.1:55157257-55157276 | None:intergenic | 35.0% | |
TAGTCTTCCTTCTTTCAGTT+GGG | - | chr5.1:55153620-55153639 | None:intergenic | 35.0% | |
TATTCTTTCCTGGACTTTCA+AGG | + | chr5.1:55157036-55157055 | MS.gene57016:CDS | 35.0% | |
TCACTCATTAGAGAGAAACT+CGG | + | chr5.1:55153527-55153546 | MS.gene57016:CDS | 35.0% | |
TCCAATTGAGTTACGGATAA+AGG | + | chr5.1:55152315-55152334 | MS.gene57016:CDS | 35.0% | |
TCCATATAGATTCTGACAAC+AGG | - | chr5.1:55154096-55154115 | None:intergenic | 35.0% | |
TCCTTTATCCGTAACTCAAT+TGG | - | chr5.1:55152319-55152338 | None:intergenic | 35.0% | |
TCTCCTTCGAGTAAATTGTT+TGG | - | chr5.1:55152760-55152779 | None:intergenic | 35.0% | |
TGAGCTCTTTATTCAGATCA+TGG | + | chr5.1:55155033-55155052 | MS.gene57016:intron | 35.0% | |
TGATGCTAGGGAAACATTTA+AGG | + | chr5.1:55155164-55155183 | MS.gene57016:intron | 35.0% | |
TGGAATATCTGATAAGCTTG+AGG | + | chr5.1:55152849-55152868 | MS.gene57016:CDS | 35.0% | |
TTAGGTGATGAAATGAAGGT+TGG | + | chr5.1:55152448-55152467 | MS.gene57016:CDS | 35.0% | |
TTCCAAAGGCTTCCAAATTA+TGG | - | chr5.1:55153091-55153110 | None:intergenic | 35.0% | |
TTGCTGAAACCATTAGAGAA+TGG | + | chr5.1:55152635-55152654 | MS.gene57016:CDS | 35.0% | |
TTGGTTACTGATCAAAACTG+TGG | + | chr5.1:55152895-55152914 | MS.gene57016:CDS | 35.0% | |
TTTAACTGGAGAAGGTTCAT+TGG | - | chr5.1:55153457-55153476 | None:intergenic | 35.0% | |
TTTACGTTTATCATGCAGGA+TGG | + | chr5.1:55155841-55155860 | MS.gene57016:intron | 35.0% | |
TTTATCCGTAACTCAATTGG+AGG | - | chr5.1:55152316-55152335 | None:intergenic | 35.0% | |
TTTGTTTACTCCTCAAACAC+TGG | - | chr5.1:55155998-55156017 | None:intergenic | 35.0% | |
! | AACTTTTCAGTTGAGGAGTT+TGG | + | chr5.1:55152084-55152103 | MS.gene57016:intron | 35.0% |
! | ACACCATGGTGTTAATATTC+AGG | + | chr5.1:55155674-55155693 | MS.gene57016:intron | 35.0% |
! | AGAATGGACTTGTAATGTGA+AGG | + | chr5.1:55152651-55152670 | MS.gene57016:CDS | 35.0% |
! | AGTCGACAATGCATGATTTT+TGG | + | chr5.1:55155096-55155115 | MS.gene57016:intron | 35.0% |
! | AGTTTGGAAGATGGTTTTCT+GGG | + | chr5.1:55152100-55152119 | MS.gene57016:CDS | 35.0% |
! | CAAAGTACAAGGTCTTTTAC+TGG | + | chr5.1:55154006-55154025 | MS.gene57016:CDS | 35.0% |
! | CATCTTTTTCTCCATTTCTG+AGG | - | chr5.1:55154769-55154788 | None:intergenic | 35.0% |
! | GACGTTCTAAGTCCATAATT+TGG | + | chr5.1:55153076-55153095 | MS.gene57016:CDS | 35.0% |
! | TCTTCATCTGCTTTAGATTG+TGG | + | chr5.1:55152259-55152278 | MS.gene57016:CDS | 35.0% |
! | TTTAATGGATGAGCTCGAAA+AGG | + | chr5.1:55156644-55156663 | MS.gene57016:CDS | 35.0% |
!! | ATTAGGAAAGCCAGTTTTAG+TGG | + | chr5.1:55155294-55155313 | MS.gene57016:CDS | 35.0% |
!! | CTGGCTTTCCTAATAGATTT+TGG | - | chr5.1:55155288-55155307 | None:intergenic | 35.0% |
!! | GAATGATGGATCTACAAGTT+TGG | + | chr5.1:55157442-55157461 | MS.gene57016:CDS | 35.0% |
!! | GCATGCAAAAGTATCACTAT+AGG | + | chr5.1:55156144-55156163 | MS.gene57016:intron | 35.0% |
!! | GGTGGATGTTTCTAATGTTT+TGG | + | chr5.1:55152225-55152244 | MS.gene57016:CDS | 35.0% |
!! | GGTTTTTCTTGAGTTGTTTG+AGG | + | chr5.1:55152540-55152559 | MS.gene57016:CDS | 35.0% |
!! | TCACTGATGGATTTGTTAAC+AGG | + | chr5.1:55156245-55156264 | MS.gene57016:intron | 35.0% |
!! | TCATGTATTGGCTGTAAGTT+TGG | + | chr5.1:55157140-55157159 | MS.gene57016:intron | 35.0% |
!! | TTAGGAAAGCCAGTTTTAGT+GGG | + | chr5.1:55155295-55155314 | MS.gene57016:CDS | 35.0% |
!!! | AGGCTCTTTTTGAAGCAATT+GGG | - | chr5.1:55153775-55153794 | None:intergenic | 35.0% |
!!! | ATGTGGAGGAGTATTGTTTT+CGG | - | chr5.1:55153247-55153266 | None:intergenic | 35.0% |
!!! | TGGGTTGTTGATTTCGTTTT+TGG | + | chr5.1:55151621-55151640 | MS.gene57016:intron | 35.0% |
AACATCTGTTAGCAGAAGGA+TGG | + | chr5.1:55153583-55153602 | MS.gene57016:CDS | 40.0% | |
AACCAACAAGTTTGAGGAGT+CGG | - | chr5.1:55152881-55152900 | None:intergenic | 40.0% | |
AAGATTTCCATCTCCGGAAT+CGG | + | chr5.1:55157086-55157105 | MS.gene57016:CDS | 40.0% | |
AAGTCGTCTGTACTGAAATC+TGG | - | chr5.1:55156610-55156629 | None:intergenic | 40.0% | |
AATTCTTATGATACGCCGAG+GGG | - | chr5.1:55154346-55154365 | None:intergenic | 40.0% | |
ACAATTCTTATGATACGCCG+AGG | - | chr5.1:55154348-55154367 | None:intergenic | 40.0% | |
ACACAGGACAAGAGAAATCA+CGG | + | chr5.1:55154229-55154248 | MS.gene57016:CDS | 40.0% | |
ACACATCACAAAGGAATGGA+TGG | - | chr5.1:55154672-55154691 | None:intergenic | 40.0% | |
ACTGAGAATTGGTTACCAAG+AGG | + | chr5.1:55152511-55152530 | MS.gene57016:CDS | 40.0% | |
AGAAAAACCCATTTCCCTCT+TGG | - | chr5.1:55152529-55152548 | None:intergenic | 40.0% | |
AGATTGCTGTCAATTTGAGG+TGG | - | chr5.1:55153375-55153394 | None:intergenic | 40.0% | |
AGATTTCAGTACAGACGACT+TGG | + | chr5.1:55156609-55156628 | MS.gene57016:CDS | 40.0% | |
AGGTTATAATCCAACCAGTG+AGG | - | chr5.1:55157292-55157311 | None:intergenic | 40.0% | |
AGGTTGGAGTTAAACAACTG+AGG | + | chr5.1:55152464-55152483 | MS.gene57016:CDS | 40.0% | |
ATCACCACCATGATCAGAAT+TGG | - | chr5.1:55153730-55153749 | None:intergenic | 40.0% | |
ATGAGTATGCACTTGGATGT+AGG | + | chr5.1:55153145-55153164 | MS.gene57016:CDS | 40.0% | |
ATGGCAAGAGGACAAAATTC+TGG | - | chr5.1:55153492-55153511 | None:intergenic | 40.0% | |
ATTGGTTACCAAGAGGGAAA+TGG | + | chr5.1:55152518-55152537 | MS.gene57016:CDS | 40.0% | |
CAAGTGGAAAGATCAGATGA+AGG | - | chr5.1:55152033-55152052 | None:intergenic | 40.0% | |
CAATTCTTATGATACGCCGA+GGG | - | chr5.1:55154347-55154366 | None:intergenic | 40.0% | |
CACCAATTACCTCAACAACA+AGG | - | chr5.1:55152690-55152709 | None:intergenic | 40.0% | |
CAGAATCTATATGGACTCAG+CGG | + | chr5.1:55154101-55154120 | MS.gene57016:CDS | 40.0% | |
CAGTCTCAGTGAAACAGATT+TGG | + | chr5.1:55152587-55152606 | MS.gene57016:CDS | 40.0% | |
CATCAGAAGCTAAAGCAACT+GGG | + | chr5.1:55156907-55156926 | MS.gene57016:intron | 40.0% | |
CATTGTGATGCTGCTAATCA+AGG | + | chr5.1:55152805-55152824 | MS.gene57016:CDS | 40.0% | |
CATTGTGTTGCCAAAGTACA+AGG | + | chr5.1:55153995-55154014 | MS.gene57016:CDS | 40.0% | |
CCTTCAAACAGATCATTGTG+CGG | - | chr5.1:55154260-55154279 | None:intergenic | 40.0% | |
CGGATAAAGGATCTTCCATT+TGG | + | chr5.1:55152328-55152347 | MS.gene57016:CDS | 40.0% | |
CTCAATCGACTAAACTTCCA+GGG | + | chr5.1:55156379-55156398 | MS.gene57016:CDS | 40.0% | |
CTGAGAATTGGTTACCAAGA+GGG | + | chr5.1:55152512-55152531 | MS.gene57016:CDS | 40.0% | |
GAAACTCTCCTACGTTTGAA+GGG | + | chr5.1:55154042-55154061 | MS.gene57016:CDS | 40.0% | |
GAAATATCAGGATGCTTGGT+GGG | + | chr5.1:55152366-55152385 | MS.gene57016:CDS | 40.0% | |
GAAGTACAGTATAGAAACCC+TGG | - | chr5.1:55156399-55156418 | None:intergenic | 40.0% | |
GAATGGACCAATTCTGATCA+TGG | + | chr5.1:55153720-55153739 | MS.gene57016:CDS | 40.0% | |
GACAAAACCAATCACCATCA+GGG | - | chr5.1:55154528-55154547 | None:intergenic | 40.0% | |
GCGACTCCAAAACAACAAAA+TGG | + | chr5.1:55157333-55157352 | MS.gene57016:CDS | 40.0% | |
GCTAATCAAGGTGATGCATT+TGG | + | chr5.1:55152817-55152836 | MS.gene57016:CDS | 40.0% | |
GGAGAATTACAGCAAACTGA+GGG | + | chr5.1:55155402-55155421 | MS.gene57016:CDS | 40.0% | |
GGGATGAATCAACTGAGAAT+TGG | + | chr5.1:55152500-55152519 | MS.gene57016:CDS | 40.0% | |
GGTGCTAAGATCAAGCAAAA+GGG | + | chr5.1:55153905-55153924 | MS.gene57016:CDS | 40.0% | |
GTAGTCTTCCTTCTTTCAGT+TGG | - | chr5.1:55153621-55153640 | None:intergenic | 40.0% | |
GTCACTGTTAGATTGCATGA+GGG | + | chr5.1:55154193-55154212 | MS.gene57016:CDS | 40.0% | |
GTCCATAATTTGGAAGCCTT+TGG | + | chr5.1:55153086-55153105 | MS.gene57016:CDS | 40.0% | |
GTGACAGTAGTATTTCACGA+TGG | - | chr5.1:55153511-55153530 | None:intergenic | 40.0% | |
GTTGAAACCTTGGCTCATTT+GGG | - | chr5.1:55153421-55153440 | None:intergenic | 40.0% | |
GTTGACAAGATTTCCATCTC+CGG | + | chr5.1:55157080-55157099 | MS.gene57016:CDS | 40.0% | |
TAAACAACTGAGGATCACTC+AGG | + | chr5.1:55152474-55152493 | MS.gene57016:CDS | 40.0% | |
TAAACAGTTTCCTCACTGGT+TGG | + | chr5.1:55157279-55157298 | MS.gene57016:intron | 40.0% | |
TAAACGCACAAGGACTTCAA+AGG | + | chr5.1:55153842-55153861 | MS.gene57016:CDS | 40.0% | |
TAGTATTTCACGATGGCAAG+AGG | - | chr5.1:55153504-55153523 | None:intergenic | 40.0% | |
TAGTGTTAGGGCAAAGTTTG+CGG | + | chr5.1:55155817-55155836 | MS.gene57016:intron | 40.0% | |
TCAAATTCCTCATCCACCAA+AGG | - | chr5.1:55152937-55152956 | None:intergenic | 40.0% | |
TCAACTTCAGACAGTTCCAA+AGG | - | chr5.1:55153105-55153124 | None:intergenic | 40.0% | |
TCATCAGAAGCTAAAGCAAC+TGG | + | chr5.1:55156906-55156925 | MS.gene57016:intron | 40.0% | |
TCATGCAGGATGGAATTTCT+TGG | + | chr5.1:55155851-55155870 | MS.gene57016:intron | 40.0% | |
TCTCCACAAGATCAGTGTTT+AGG | + | chr5.1:55153651-55153670 | MS.gene57016:CDS | 40.0% | |
TCTTTGAGTCCATTCACTGA+TGG | + | chr5.1:55156232-55156251 | MS.gene57016:intron | 40.0% | |
TGAAATATCAGGATGCTTGG+TGG | + | chr5.1:55152365-55152384 | MS.gene57016:CDS | 40.0% | |
TGATCAGAATTGGTCCATTC+GGG | - | chr5.1:55153720-55153739 | None:intergenic | 40.0% | |
TGGAGAATTACAGCAAACTG+AGG | + | chr5.1:55155401-55155420 | MS.gene57016:CDS | 40.0% | |
TGTTCTGTTTGTAACTACGG+TGG | + | chr5.1:55154296-55154315 | MS.gene57016:CDS | 40.0% | |
TTACGGTTTCTCTTTGCAGT+TGG | - | chr5.1:55153825-55153844 | None:intergenic | 40.0% | |
TTATATTCACACTGCGCCAA+TGG | + | chr5.1:55156321-55156340 | MS.gene57016:intron | 40.0% | |
TTCAAAGGCTAGCACACAAA+AGG | + | chr5.1:55153857-55153876 | MS.gene57016:CDS | 40.0% | |
TTGAAACCTTGGCTCATTTG+GGG | - | chr5.1:55153420-55153439 | None:intergenic | 40.0% | |
TTGAAGTCCTTGTGCGTTTA+CGG | - | chr5.1:55153842-55153861 | None:intergenic | 40.0% | |
TTGACTACCCAACTGAAAGA+AGG | + | chr5.1:55153610-55153629 | MS.gene57016:CDS | 40.0% | |
TTGGTTACCAAGAGGGAAAT+GGG | + | chr5.1:55152519-55152538 | MS.gene57016:CDS | 40.0% | |
TTTCACTGAGACTGCAACAT+AGG | - | chr5.1:55152581-55152600 | None:intergenic | 40.0% | |
! | AGCAGATGACGAATTTTGAG+AGG | + | chr5.1:55156998-55157017 | MS.gene57016:CDS | 40.0% |
! | AGCCTTTTTCCATTACACCA+TGG | + | chr5.1:55155660-55155679 | MS.gene57016:intron | 40.0% |
! | CACCATGGTGTAATGGAAAA+AGG | - | chr5.1:55155665-55155684 | None:intergenic | 40.0% |
! | GAGTTTGGAAGATGGTTTTC+TGG | + | chr5.1:55152099-55152118 | MS.gene57016:CDS | 40.0% |
! | GTAAGCAAAGCTATTTCAGC+AGG | - | chr5.1:55155629-55155648 | None:intergenic | 40.0% |
! | GTTTCTGGACTATTCTTTCC+TGG | + | chr5.1:55157026-55157045 | MS.gene57016:CDS | 40.0% |
! | TGGAGAGTGAAGTACTTACA+CGG | + | chr5.1:55153883-55153902 | MS.gene57016:CDS | 40.0% |
! | TTGTTTGGAAGGTTTAAGGC+GGG | - | chr5.1:55152745-55152764 | None:intergenic | 40.0% |
!! | AAAAGGGTGCAGAAGGTTTT+GGG | + | chr5.1:55153921-55153940 | MS.gene57016:CDS | 40.0% |
!! | GACCTTGTTGTTGAGGTAAT+TGG | + | chr5.1:55152685-55152704 | MS.gene57016:CDS | 40.0% |
!! | GATGCATTTGGTTCTGACAT+TGG | + | chr5.1:55152829-55152848 | MS.gene57016:CDS | 40.0% |
!! | TAGGAAAGCCAGTTTTAGTG+GGG | + | chr5.1:55155296-55155315 | MS.gene57016:CDS | 40.0% |
!! | TATGTACTTTGGAACCTCGT+AGG | + | chr5.1:55156350-55156369 | MS.gene57016:intron | 40.0% |
!! | TATGTCAACTCTGAGACTTG+CGG | + | chr5.1:55155349-55155368 | MS.gene57016:CDS | 40.0% |
!! | TTTTGAGAGGTCACAGTTTC+TGG | + | chr5.1:55157011-55157030 | MS.gene57016:CDS | 40.0% |
!!! | AAGATGGTTTTCTGGGATCA+TGG | + | chr5.1:55152107-55152126 | MS.gene57016:CDS | 40.0% |
!!! | CAGGCTCTTTTTGAAGCAAT+TGG | - | chr5.1:55153776-55153795 | None:intergenic | 40.0% |
AACTCAATTGGAGGCGGTAA+CGG | - | chr5.1:55152307-55152326 | None:intergenic | 45.0% | |
AACTGAGGATCACTCAGGAT+TGG | + | chr5.1:55152479-55152498 | MS.gene57016:CDS | 45.0% | |
AAGCAGTAACTGCAGACCTT+CGG | + | chr5.1:55154145-55154164 | MS.gene57016:CDS | 45.0% | |
ACGATATCTCTGCTGGAGAA+AGG | - | chr5.1:55155472-55155491 | None:intergenic | 45.0% | |
ACGGGGCTCCAAAATCTATT+AGG | + | chr5.1:55155277-55155296 | MS.gene57016:CDS | 45.0% | |
ACTCGGCTGATAAGAGAAAG+TGG | + | chr5.1:55153544-55153563 | MS.gene57016:CDS | 45.0% | |
ACTGAAATCTGGTACCTACG+AGG | - | chr5.1:55156599-55156618 | None:intergenic | 45.0% | |
ACTGAGGATCACTCAGGATT+GGG | + | chr5.1:55152480-55152499 | MS.gene57016:CDS | 45.0% | |
ACTGGAGAAGGTTCATTGGT+TGG | - | chr5.1:55153453-55153472 | None:intergenic | 45.0% | |
ACTTGGATGTAGGAGCAAGA+CGG | + | chr5.1:55153155-55153174 | MS.gene57016:CDS | 45.0% | |
AGAGAAACCGTAAACGCACA+AGG | + | chr5.1:55153832-55153851 | MS.gene57016:CDS | 45.0% | |
ATCCGTAACTCAATTGGAGG+CGG | - | chr5.1:55152313-55152332 | None:intergenic | 45.0% | |
CACAAGCATCATTCCTTTGG+TGG | + | chr5.1:55152921-55152940 | MS.gene57016:CDS | 45.0% | |
CAGCACAAGCATCATTCCTT+TGG | + | chr5.1:55152918-55152937 | MS.gene57016:CDS | 45.0% | |
CAGGGAAAATTATCCGCTGT+GGG | + | chr5.1:55152134-55152153 | MS.gene57016:CDS | 45.0% | |
CAGTGTTTAGGCACACTTCA+AGG | + | chr5.1:55153663-55153682 | MS.gene57016:CDS | 45.0% | |
CAGTTGAGGAGTTTGGAAGA+TGG | + | chr5.1:55152091-55152110 | MS.gene57016:intron | 45.0% | |
CATGTTGAGTGCCTCAGAAA+TGG | + | chr5.1:55154755-55154774 | MS.gene57016:CDS | 45.0% | |
CCGCACAATGATCTGTTTGA+AGG | + | chr5.1:55154257-55154276 | MS.gene57016:CDS | 45.0% | |
CGAGCTCATCCATTAAAACG+CGG | - | chr5.1:55156641-55156660 | None:intergenic | 45.0% | |
CGATATCTCTGCTGGAGAAA+GGG | - | chr5.1:55155471-55155490 | None:intergenic | 45.0% | |
CGGCTTTACGTTTATCATGC+AGG | + | chr5.1:55155837-55155856 | MS.gene57016:intron | 45.0% | |
CGTCATCTGCTCAAAACCAA+AGG | - | chr5.1:55156989-55157008 | None:intergenic | 45.0% | |
CGTTGAAACCTTGGCTCATT+TGG | - | chr5.1:55153422-55153441 | None:intergenic | 45.0% | |
CTGAAATCTGGTACCTACGA+GGG | - | chr5.1:55156598-55156617 | None:intergenic | 45.0% | |
CTGAAGTGGATCAAGCAGAA+GGG | + | chr5.1:55157406-55157425 | MS.gene57016:CDS | 45.0% | |
GACACATGGACGAATTCCTT+TGG | + | chr5.1:55156970-55156989 | MS.gene57016:CDS | 45.0% | |
GAGGACAAACGTTGAAACCT+TGG | - | chr5.1:55153431-55153450 | None:intergenic | 45.0% | |
GAGGATCCTAACATGAACTC+TGG | + | chr5.1:55153348-55153367 | MS.gene57016:CDS | 45.0% | |
GATTAGTGAGCCAGTGTTTG+AGG | + | chr5.1:55155985-55156004 | MS.gene57016:intron | 45.0% | |
GCGAACTTCGCTTAATGTGA+GGG | - | chr5.1:55152722-55152741 | None:intergenic | 45.0% | |
GCTCAATCGACTAAACTTCC+AGG | + | chr5.1:55156378-55156397 | MS.gene57016:CDS | 45.0% | |
GCTTGATCCACTTCAGATAC+TGG | - | chr5.1:55157402-55157421 | None:intergenic | 45.0% | |
GGAAACTCTCCTACGTTTGA+AGG | + | chr5.1:55154041-55154060 | MS.gene57016:CDS | 45.0% | |
GGACAAAACCAATCACCATC+AGG | - | chr5.1:55154529-55154548 | None:intergenic | 45.0% | |
GGATAACTCGCGAAGGAATT+AGG | + | chr5.1:55154066-55154085 | MS.gene57016:CDS | 45.0% | |
GGGAAGTAATGCAAGAACAC+AGG | + | chr5.1:55154213-55154232 | MS.gene57016:CDS | 45.0% | |
GGGTGCTAAGATCAAGCAAA+AGG | + | chr5.1:55153904-55153923 | MS.gene57016:CDS | 45.0% | |
GGTCACTGTTAGATTGCATG+AGG | + | chr5.1:55154192-55154211 | MS.gene57016:CDS | 45.0% | |
GGTGGATGAGGAATTTGAGA+AGG | + | chr5.1:55152939-55152958 | MS.gene57016:CDS | 45.0% | |
GGTGGATGTGGAATTTGAGA+AGG | + | chr5.1:55153005-55153024 | MS.gene57016:CDS | 45.0% | |
GTGCCTAAACACTGATCTTG+TGG | - | chr5.1:55153657-55153676 | None:intergenic | 45.0% | |
GTTATCCTCCCTTCAAACGT+AGG | - | chr5.1:55154053-55154072 | None:intergenic | 45.0% | |
GTTTATCCGGAGACTTGTAC+CGG | - | chr5.1:55153278-55153297 | None:intergenic | 45.0% | |
TACCGCCTCCAATTGAGTTA+CGG | + | chr5.1:55152308-55152327 | MS.gene57016:CDS | 45.0% | |
TGAAATCTGGTACCTACGAG+GGG | - | chr5.1:55156597-55156616 | None:intergenic | 45.0% | |
TGACAGTTCCTTGAAAGTCC+AGG | - | chr5.1:55157047-55157066 | None:intergenic | 45.0% | |
TGCTGAAAGTGACTTAGTGG+TGG | + | chr5.1:55155381-55155400 | MS.gene57016:CDS | 45.0% | |
TGGACCAATTCTGATCATGG+TGG | + | chr5.1:55153723-55153742 | MS.gene57016:CDS | 45.0% | |
TTAGATTGTGGCTATCAGCG+AGG | + | chr5.1:55152271-55152290 | MS.gene57016:CDS | 45.0% | |
TTTCTCCAGCAGAGATATCG+TGG | + | chr5.1:55155471-55155490 | MS.gene57016:CDS | 45.0% | |
! | ACTTTTCGCAGGTCTATACG+GGG | + | chr5.1:55155260-55155279 | MS.gene57016:intron | 45.0% |
! | AGTTGTTTGAGGAGTGTGAG+AGG | + | chr5.1:55152551-55152570 | MS.gene57016:CDS | 45.0% |
! | ATCAAGCAAAAGGGTGCAGA+AGG | + | chr5.1:55153914-55153933 | MS.gene57016:CDS | 45.0% |
! | CACTTTTCGCAGGTCTATAC+GGG | + | chr5.1:55155259-55155278 | MS.gene57016:intron | 45.0% |
! | CATCATTCCTTTGGTGGATG+AGG | + | chr5.1:55152927-55152946 | MS.gene57016:CDS | 45.0% |
! | CCTCTTGTTACAACCGATTC+CGG | - | chr5.1:55157102-55157121 | None:intergenic | 45.0% |
! | CTGTGGAGAAAAGTGTGAAC+AGG | + | chr5.1:55154817-55154836 | MS.gene57016:CDS | 45.0% |
! | GCACTTTTCGCAGGTCTATA+CGG | + | chr5.1:55155258-55155277 | MS.gene57016:intron | 45.0% |
! | GCAGAAGGGATTAGCAAAAG+AGG | + | chr5.1:55157420-55157439 | MS.gene57016:CDS | 45.0% |
! | GGAGAGTGAAGTACTTACAC+GGG | + | chr5.1:55153884-55153903 | MS.gene57016:CDS | 45.0% |
! | GTCTTTTACTGGGAAACCGA+AGG | + | chr5.1:55154017-55154036 | MS.gene57016:CDS | 45.0% |
! | GTTGTTTGAGGAGTGTGAGA+GGG | + | chr5.1:55152552-55152571 | MS.gene57016:CDS | 45.0% |
! | TCTGAAGTGGATCAAGCAGA+AGG | + | chr5.1:55157405-55157424 | MS.gene57016:CDS | 45.0% |
! | TGGAATGTGCCGCGTTTTAA+TGG | + | chr5.1:55156629-55156648 | MS.gene57016:CDS | 45.0% |
! | TGTTTGGAAGGTTTAAGGCG+GGG | - | chr5.1:55152744-55152763 | None:intergenic | 45.0% |
! | TTGTACCGGTATCGTCTATG+TGG | - | chr5.1:55153264-55153283 | None:intergenic | 45.0% |
! | TTTTACTGGGAAACCGAAGG+AGG | + | chr5.1:55154020-55154039 | MS.gene57016:CDS | 45.0% |
! | TTTTGTCCATCATGCCGTTG+CGG | + | chr5.1:55154541-55154560 | MS.gene57016:CDS | 45.0% |
!! | AGGAAAGCCAGTTTTAGTGG+GGG | + | chr5.1:55155297-55155316 | MS.gene57016:CDS | 45.0% |
!! | CAAAAGGGTGCAGAAGGTTT+TGG | + | chr5.1:55153920-55153939 | MS.gene57016:CDS | 45.0% |
!! | GGCATGAAGCACTGAATTGA+AGG | - | chr5.1:55154473-55154492 | None:intergenic | 45.0% |
AAACCTTGGCTCATTTGGGG+TGG | - | chr5.1:55153417-55153436 | None:intergenic | 50.0% | |
ACGATACCGGTACAAGTCTC+CGG | + | chr5.1:55153269-55153288 | MS.gene57016:CDS | 50.0% | |
ACTCTCCTACGTTTGAAGGG+AGG | + | chr5.1:55154045-55154064 | MS.gene57016:CDS | 50.0% | |
AGTTACTGCTTCCACCAGCA+TGG | - | chr5.1:55154136-55154155 | None:intergenic | 50.0% | |
ATGTAGGAGCAAGACGGTTC+GGG | + | chr5.1:55153161-55153180 | MS.gene57016:CDS | 50.0% | |
CAAACTGAGGGTTGCACTCT+CGG | + | chr5.1:55155414-55155433 | MS.gene57016:CDS | 50.0% | |
CCAGGGAAAATTATCCGCTG+TGG | + | chr5.1:55152133-55152152 | MS.gene57016:CDS | 50.0% | |
CCGGAATCGGTTGTAACAAG+AGG | + | chr5.1:55157099-55157118 | MS.gene57016:CDS | 50.0% | |
CGGTTTCTCTTTGCAGTTGG+TGG | - | chr5.1:55153822-55153841 | None:intergenic | 50.0% | |
CGTAGGAGAGTTTCCTCCTT+CGG | - | chr5.1:55154036-55154055 | None:intergenic | 50.0% | |
CTCCTCCACATAGACGATAC+CGG | + | chr5.1:55153256-55153275 | MS.gene57016:CDS | 50.0% | |
CTGGAGAAAGGGTTATGCAG+GGG | - | chr5.1:55155460-55155479 | None:intergenic | 50.0% | |
GAAGCTAAAGCAACTGGGAG+TGG | + | chr5.1:55156912-55156931 | MS.gene57016:intron | 50.0% | |
GATGTAGGAGCAAGACGGTT+CGG | + | chr5.1:55153160-55153179 | MS.gene57016:CDS | 50.0% | |
GCTGCGATGGAATGAAGGAT+AGG | + | chr5.1:55152407-55152426 | MS.gene57016:CDS | 50.0% | |
GCTGGAGAAAGGGTTATGCA+GGG | - | chr5.1:55155461-55155480 | None:intergenic | 50.0% | |
GGAAAATTATCCGCTGTGGG+AGG | + | chr5.1:55152137-55152156 | MS.gene57016:CDS | 50.0% | |
GGCGAACTTCGCTTAATGTG+AGG | - | chr5.1:55152723-55152742 | None:intergenic | 50.0% | |
GGCTAGCACACAAAAGGACT+TGG | + | chr5.1:55153863-55153882 | MS.gene57016:CDS | 50.0% | |
GGTGGTCCAGAGTTCATGTT+AGG | - | chr5.1:55153357-55153376 | None:intergenic | 50.0% | |
GTCTTCCACGATATCTCTGC+TGG | - | chr5.1:55155479-55155498 | None:intergenic | 50.0% | |
GTGATATTCGATCGCTGCGA+TGG | + | chr5.1:55152394-55152413 | MS.gene57016:CDS | 50.0% | |
TACCGGTATCGTCTATGTGG+AGG | - | chr5.1:55153261-55153280 | None:intergenic | 50.0% | |
TGATTAGTGTGGCGACTGTG+AGG | + | chr5.1:55156437-55156456 | MS.gene57016:CDS | 50.0% | |
TGCTGGAGAAAGGGTTATGC+AGG | - | chr5.1:55155462-55155481 | None:intergenic | 50.0% | |
TGGGGGCGGATAATCTAACT+TGG | + | chr5.1:55155314-55155333 | MS.gene57016:CDS | 50.0% | |
TTATCCGCCCCCACTAAAAC+TGG | - | chr5.1:55155307-55155326 | None:intergenic | 50.0% | |
TTTATGCGACCAATGCCCCT+CGG | + | chr5.1:55154328-55154347 | MS.gene57016:CDS | 50.0% | |
TTTGTCCATCATGCCGTTGC+GGG | + | chr5.1:55154542-55154561 | MS.gene57016:CDS | 50.0% | |
! | CCACAGCGGATAATTTTCCC+TGG | - | chr5.1:55152136-55152155 | None:intergenic | 50.0% |
! | CGGTGCTGAAAGTGACTTAG+TGG | + | chr5.1:55155378-55155397 | MS.gene57016:CDS | 50.0% |
! | GGAGAAGGTTCATTGGTTGG+AGG | - | chr5.1:55153450-55153469 | None:intergenic | 50.0% |
! | GGCTAGTCCAGTATCTGAAG+TGG | + | chr5.1:55157392-55157411 | MS.gene57016:CDS | 50.0% |
! | GTTACAACCGATTCCGGAGA+TGG | - | chr5.1:55157096-55157115 | None:intergenic | 50.0% |
! | TATCAGGATGCTTGGTGGGA+AGG | + | chr5.1:55152370-55152389 | MS.gene57016:CDS | 50.0% |
!! | AAAGCCAGTTTTAGTGGGGG+CGG | + | chr5.1:55155300-55155319 | MS.gene57016:CDS | 50.0% |
!! | AACTCTGAGACTTGCGGTGT+TGG | + | chr5.1:55155355-55155374 | MS.gene57016:CDS | 50.0% |
!! | GTGGAGAGACCTTGTTGTTG+AGG | + | chr5.1:55152678-55152697 | MS.gene57016:CDS | 50.0% |
!! | TTCTGGGATCATGGCATCCA+GGG | + | chr5.1:55152116-55152135 | MS.gene57016:CDS | 50.0% |
!! | TTTCTGGGATCATGGCATCC+AGG | + | chr5.1:55152115-55152134 | MS.gene57016:CDS | 50.0% |
AGCGGCTTTGCAAACCATGC+TGG | + | chr5.1:55154119-55154138 | MS.gene57016:CDS | 55.0% | |
CAAATCCCGCAACGGCATGA+TGG | - | chr5.1:55154550-55154569 | None:intergenic | 55.0% | |
CGATCGCTGCGATGGAATGA+AGG | + | chr5.1:55152402-55152421 | MS.gene57016:CDS | 55.0% | |
CGATTGAGCTCAGACCTACG+AGG | - | chr5.1:55156367-55156386 | None:intergenic | 55.0% | |
CGTCCATGTGTCTAGCACAC+CGG | - | chr5.1:55156962-55156981 | None:intergenic | 55.0% | |
GAAGGGAGGATAACTCGCGA+AGG | + | chr5.1:55154059-55154078 | MS.gene57016:CDS | 55.0% | |
GATCCACCCCAAATGAGCCA+AGG | + | chr5.1:55153411-55153430 | MS.gene57016:CDS | 55.0% | |
GGCGACTGTGAGGTGAGTAT+AGG | + | chr5.1:55156447-55156466 | MS.gene57016:intron | 55.0% | |
GGCTTTGCAAACCATGCTGG+TGG | + | chr5.1:55154122-55154141 | MS.gene57016:CDS | 55.0% | |
GTCCATGTGTCTAGCACACC+GGG | - | chr5.1:55156961-55156980 | None:intergenic | 55.0% | |
TCATGCCGTTGCGGGATTTG+CGG | + | chr5.1:55154550-55154569 | MS.gene57016:CDS | 55.0% | |
TTCCCGGTGTGCTAGACACA+TGG | + | chr5.1:55156956-55156975 | MS.gene57016:CDS | 55.0% | |
TTTGGCCGCAAATCCCGCAA+CGG | - | chr5.1:55154558-55154577 | None:intergenic | 55.0% | |
! | AGGGCATCCCTGATGGTGAT+TGG | + | chr5.1:55154518-55154537 | MS.gene57016:intron | 55.0% |
! | CATGTGTAGGGCATCCCTGA+TGG | + | chr5.1:55154511-55154530 | MS.gene57016:intron | 55.0% |
! | GAGGCGGTAACGGTCTAATC+AGG | - | chr5.1:55152297-55152316 | None:intergenic | 55.0% |
! | TACGCGCATGCACTTTTCGC+AGG | + | chr5.1:55155249-55155268 | MS.gene57016:intron | 55.0% |
! | TATGATACGCCGAGGGGCAT+TGG | - | chr5.1:55154340-55154359 | None:intergenic | 55.0% |
! | TCTGAGACTTGCGGTGTTGG+CGG | + | chr5.1:55155358-55155377 | MS.gene57016:CDS | 55.0% |
!! | ATAGCAGAAGTGCCCCTCGT+AGG | + | chr5.1:55156582-55156601 | MS.gene57016:CDS | 55.0% |
!! | CGCCGACTCCTCAAACTTGT+TGG | + | chr5.1:55152876-55152895 | MS.gene57016:CDS | 55.0% |
!! | CTAGTCTTGCCTGCTGTTCC+CGG | + | chr5.1:55156940-55156959 | MS.gene57016:CDS | 55.0% |
AACGCGTCTTCCTCCCACAG+CGG | - | chr5.1:55152150-55152169 | None:intergenic | 60.0% | |
TCTAGCACACCGGGAACAGC+AGG | - | chr5.1:55156952-55156971 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 55151448 | 55157476 | 55151448 | ID=MS.gene57016 |
chr5.1 | mRNA | 55151448 | 55157476 | 55151448 | ID=MS.gene57016.t1;Parent=MS.gene57016 |
chr5.1 | exon | 55151448 | 55151540 | 55151448 | ID=MS.gene57016.t1.exon1;Parent=MS.gene57016.t1 |
chr5.1 | CDS | 55151448 | 55151540 | 55151448 | ID=cds.MS.gene57016.t1;Parent=MS.gene57016.t1 |
chr5.1 | exon | 55152094 | 55154379 | 55152094 | ID=MS.gene57016.t1.exon2;Parent=MS.gene57016.t1 |
chr5.1 | CDS | 55152094 | 55154379 | 55152094 | ID=cds.MS.gene57016.t1;Parent=MS.gene57016.t1 |
chr5.1 | exon | 55154520 | 55154637 | 55154520 | ID=MS.gene57016.t1.exon3;Parent=MS.gene57016.t1 |
chr5.1 | CDS | 55154520 | 55154637 | 55154520 | ID=cds.MS.gene57016.t1;Parent=MS.gene57016.t1 |
chr5.1 | exon | 55154753 | 55154838 | 55154753 | ID=MS.gene57016.t1.exon4;Parent=MS.gene57016.t1 |
chr5.1 | CDS | 55154753 | 55154838 | 55154753 | ID=cds.MS.gene57016.t1;Parent=MS.gene57016.t1 |
chr5.1 | exon | 55155271 | 55155515 | 55155271 | ID=MS.gene57016.t1.exon5;Parent=MS.gene57016.t1 |
chr5.1 | CDS | 55155271 | 55155515 | 55155271 | ID=cds.MS.gene57016.t1;Parent=MS.gene57016.t1 |
chr5.1 | exon | 55156372 | 55156458 | 55156372 | ID=MS.gene57016.t1.exon6;Parent=MS.gene57016.t1 |
chr5.1 | CDS | 55156372 | 55156458 | 55156372 | ID=cds.MS.gene57016.t1;Parent=MS.gene57016.t1 |
chr5.1 | exon | 55156566 | 55156665 | 55156566 | ID=MS.gene57016.t1.exon7;Parent=MS.gene57016.t1 |
chr5.1 | CDS | 55156566 | 55156665 | 55156566 | ID=cds.MS.gene57016.t1;Parent=MS.gene57016.t1 |
chr5.1 | exon | 55156913 | 55157120 | 55156913 | ID=MS.gene57016.t1.exon8;Parent=MS.gene57016.t1 |
chr5.1 | CDS | 55156913 | 55157120 | 55156913 | ID=cds.MS.gene57016.t1;Parent=MS.gene57016.t1 |
chr5.1 | exon | 55157331 | 55157476 | 55157331 | ID=MS.gene57016.t1.exon9;Parent=MS.gene57016.t1 |
chr5.1 | CDS | 55157331 | 55157476 | 55157331 | ID=cds.MS.gene57016.t1;Parent=MS.gene57016.t1 |
Gene Sequence |
Protein sequence |