Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57115.t1 | KEH36234.1 | 77.2 | 591 | 85 | 5 | 1 | 551 | 1 | 581 | 7.60E-229 | 804.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57115.t1 | Q9FF61 | 28.3 | 653 | 371 | 24 | 581 | 1153 | 216 | 851 | 5.4e-42 | 174.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57115.t1 | A0A072V2H0 | 77.2 | 591 | 85 | 5 | 1 | 551 | 1 | 581 | 5.5e-229 | 804.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene57115.t1 | TR | SNF2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57115.t1 | MTR_3g113240 | 83.163 | 588 | 47 | 6 | 1 | 547 | 1 | 577 | 0.0 | 902 |
| MS.gene57115.t1 | MTR_7g108730 | 73.993 | 596 | 105 | 6 | 1 | 550 | 1 | 592 | 0.0 | 748 |
| MS.gene57115.t1 | MTR_8g058740 | 78.431 | 357 | 69 | 4 | 100 | 450 | 16 | 370 | 1.36e-169 | 506 |
| MS.gene57115.t1 | MTR_7g091790 | 46.208 | 567 | 223 | 18 | 1 | 535 | 1 | 517 | 3.22e-93 | 314 |
| MS.gene57115.t1 | MTR_7g089190 | 32.165 | 656 | 360 | 28 | 564 | 1153 | 156 | 792 | 3.20e-63 | 232 |
| MS.gene57115.t1 | MTR_8g038520 | 28.462 | 260 | 129 | 10 | 907 | 1151 | 33 | 250 | 2.69e-22 | 100 |
| MS.gene57115.t1 | MTR_1g044120 | 25.000 | 676 | 365 | 29 | 599 | 1153 | 473 | 1127 | 1.19e-21 | 102 |
| MS.gene57115.t1 | MTR_4g049500 | 28.052 | 385 | 225 | 17 | 818 | 1178 | 577 | 933 | 7.56e-19 | 93.2 |
| MS.gene57115.t1 | MTR_2g084630 | 24.502 | 502 | 290 | 22 | 718 | 1153 | 521 | 999 | 7.21e-16 | 83.6 |
| MS.gene57115.t1 | MTR_2g084630 | 23.992 | 496 | 291 | 22 | 718 | 1153 | 527 | 996 | 1.91e-15 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57115.t1 | AT4G02400 | 44.526 | 411 | 218 | 6 | 121 | 529 | 146 | 548 | 5.00e-85 | 296 |
| MS.gene57115.t1 | AT5G08600 | 37.726 | 554 | 274 | 17 | 17 | 526 | 2 | 528 | 4.28e-75 | 261 |
| MS.gene57115.t1 | AT5G08600 | 40.097 | 414 | 224 | 9 | 116 | 526 | 136 | 528 | 2.19e-73 | 261 |
| MS.gene57115.t1 | AT5G08600 | 40.342 | 409 | 220 | 9 | 121 | 526 | 154 | 541 | 3.71e-73 | 261 |
| MS.gene57115.t1 | AT5G05130 | 29.862 | 653 | 343 | 26 | 590 | 1153 | 225 | 851 | 2.02e-55 | 209 |
| MS.gene57115.t1 | AT5G43530 | 24.143 | 671 | 391 | 26 | 584 | 1153 | 598 | 1251 | 1.02e-21 | 102 |
| MS.gene57115.t1 | AT1G05120 | 32.645 | 242 | 127 | 12 | 932 | 1153 | 579 | 804 | 9.73e-20 | 95.9 |
| MS.gene57115.t1 | AT1G05120 | 32.231 | 242 | 128 | 11 | 932 | 1153 | 622 | 847 | 1.03e-19 | 95.9 |
| MS.gene57115.t1 | AT2G40770 | 26.255 | 259 | 150 | 8 | 925 | 1153 | 1337 | 1584 | 1.93e-12 | 72.8 |
| MS.gene57115.t1 | AT2G40770 | 26.255 | 259 | 150 | 8 | 925 | 1153 | 1337 | 1584 | 1.93e-12 | 72.8 |
| MS.gene57115.t1 | AT2G40770 | 26.255 | 259 | 150 | 8 | 925 | 1153 | 1337 | 1584 | 1.93e-12 | 72.8 |
Find 240 sgRNAs with CRISPR-Local
Find 422 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCATAACGTTTATTCTTTC+TGG | 0.044923 | 6.2:+3871891 | None:intergenic |
| AATCCATTATTCAGAGAAAT+AGG | 0.194787 | 6.2:-3871513 | MS.gene57115:CDS |
| AATTATCGACGAACATTAAA+TGG | 0.213214 | 6.2:-3868165 | MS.gene57115:CDS |
| ATTAAAAGTGTTGCAGTTAC+AGG | 0.221189 | 6.2:+3871841 | None:intergenic |
| TATTATCAGCATCAATTGTT+TGG | 0.238103 | 6.2:+3869665 | None:intergenic |
| CCTCAGGCATTCTTGTTTCA+TGG | 0.242438 | 6.2:+3870687 | None:intergenic |
| ATAAGTCGGTTGTTCCTAAA+AGG | 0.259634 | 6.2:+3866739 | None:intergenic |
| ACCAGTGGCAGAAGAGTATT+TGG | 0.264337 | 6.2:-3869700 | MS.gene57115:CDS |
| AACAATTGATGCTGATAATA+AGG | 0.265245 | 6.2:-3869662 | MS.gene57115:CDS |
| AACTGAATTTGAAGGGAAAA+TGG | 0.288569 | 6.2:-3871407 | MS.gene57115:CDS |
| TGCGTCTAATGTCTACTTAA+TGG | 0.288767 | 6.2:-3866358 | MS.gene57115:CDS |
| TCCGCACAACACGTTACTTC+TGG | 0.292776 | 6.2:+3866180 | None:intergenic |
| TAATAAATAATTACCATAAA+AGG | 0.293996 | 6.2:+3870263 | None:intergenic |
| CTCCCTATTTCTCTGAATAA+TGG | 0.295816 | 6.2:+3871510 | None:intergenic |
| TTCCCTTCAAATTCAGTTAT+GGG | 0.298959 | 6.2:+3871412 | None:intergenic |
| ATGAAGAACTACCGCCGTTT+TGG | 0.312979 | 6.2:-3868525 | MS.gene57115:CDS |
| CTTTAACAAACGATATGTTT+TGG | 0.315476 | 6.2:+3870774 | None:intergenic |
| TGCTATTGAGAAATTTAATA+TGG | 0.317635 | 6.2:-3866469 | MS.gene57115:CDS |
| TTTGATGAAAAGACAGATCT+AGG | 0.330885 | 6.2:-3871472 | MS.gene57115:CDS |
| ATTCCATGCAGTTGTCGTTT+TGG | 0.336351 | 6.2:+3871795 | None:intergenic |
| GCATATTCATTAGCAGCTTC+AGG | 0.339373 | 6.2:+3870709 | None:intergenic |
| TTTCCCTTCAAATTCAGTTA+TGG | 0.346859 | 6.2:+3871411 | None:intergenic |
| ACCTTTGCTTGATCTGCCTT+TGG | 0.349112 | 6.2:+3871586 | None:intergenic |
| TAATTCGATGTTATCATTGT+TGG | 0.353044 | 6.2:-3866568 | MS.gene57115:CDS |
| ATTATCAGCATCAATTGTTT+GGG | 0.354675 | 6.2:+3869666 | None:intergenic |
| GAATTAGACGAAGGATAATA+TGG | 0.358266 | 6.2:+3867455 | None:intergenic |
| TTATTATCATTGACAGATAC+AGG | 0.359811 | 6.2:+3871868 | None:intergenic |
| ACAATCTCTCCACCAGTTGC+AGG | 0.362141 | 6.2:-3868092 | MS.gene57115:CDS |
| TGGTGTTAGTCTTCTTGATT+TGG | 0.363245 | 6.2:-3871338 | MS.gene57115:CDS |
| GAGCGTCTTGAAGAGTATTA+AGG | 0.363299 | 6.2:+3871680 | None:intergenic |
| ATGAAGAAAACAACGCATTC+AGG | 0.364759 | 6.2:-3869528 | MS.gene57115:intron |
| GAGAAAGATCGGATCCATTC+AGG | 0.366781 | 6.2:+3868116 | None:intergenic |
| AGGGTTTCTTGTTGTGAGAC+TGG | 0.371323 | 6.2:+3868669 | None:intergenic |
| GAAAGCAAAGTCTTCTCAAT+TGG | 0.372428 | 6.2:-3870740 | MS.gene57115:CDS |
| CTTCAATGACTGTAAAGCTT+TGG | 0.375209 | 6.2:-3868419 | MS.gene57115:CDS |
| TGTTCTCGAGATAACGTAGA+AGG | 0.377618 | 6.2:+3867521 | None:intergenic |
| TTCAACGATAAAGGCAATCT+AGG | 0.381605 | 6.2:+3872009 | None:intergenic |
| AACCGAAGTCTTGAATGTTC+AGG | 0.382729 | 6.2:+3871658 | None:intergenic |
| ATTCTTTCTGGACTCTTCCT+CGG | 0.385313 | 6.2:+3871903 | None:intergenic |
| TTTCTTTAAATGTGGCTTCT+GGG | 0.385362 | 6.2:+3866923 | None:intergenic |
| TCATCAGATTGCATGTTAAA+CGG | 0.395781 | 6.2:+3867989 | None:intergenic |
| GCAAGAAAAGGGCTGAGAAA+TGG | 0.399492 | 6.2:-3866329 | MS.gene57115:CDS |
| TTGGAAACGTTCACGACGTA+AGG | 0.402528 | 6.2:-3868506 | MS.gene57115:CDS |
| AGAATCCTCCAGCTTCTTCA+TGG | 0.403400 | 6.2:+3869753 | None:intergenic |
| ACGTCACATTTCGTTTCGTT+AGG | 0.403691 | 6.2:+3868649 | None:intergenic |
| TCAGCTTTCTGGCGAGGAAC+TGG | 0.406112 | 6.2:-3867581 | MS.gene57115:CDS |
| CAGTGGATCCTCAAACCCTT+AGG | 0.409199 | 6.2:+3868268 | None:intergenic |
| ATGAAGAAGCTGGAGGATTC+TGG | 0.409963 | 6.2:-3869751 | MS.gene57115:CDS |
| TCGATTTCATTTACATCGAC+AGG | 0.410551 | 6.2:+3871958 | None:intergenic |
| CCGCACAACACGTTACTTCT+GGG | 0.418368 | 6.2:+3866181 | None:intergenic |
| GTCAGAACAGGTAAGACATT+TGG | 0.418623 | 6.2:+3866764 | None:intergenic |
| ATATGGAGAGACTGTAGGTA+AGG | 0.420741 | 6.2:+3867472 | None:intergenic |
| TAATGGAAGCTTGCAAGAAA+AGG | 0.422397 | 6.2:-3866341 | MS.gene57115:CDS |
| CGCTGATTCTGATCTGGATA+AGG | 0.425923 | 6.2:-3870375 | MS.gene57115:CDS |
| AATTGTTGAGGAGGAGGAAG+AGG | 0.427098 | 6.2:-3867951 | MS.gene57115:intron |
| CAAGAAAAGGGCTGAGAAAT+GGG | 0.427490 | 6.2:-3866328 | MS.gene57115:CDS |
| GCTTGATCTGCCTTTGGAAG+TGG | 0.428475 | 6.2:+3871592 | None:intergenic |
| AAAGTCTTCTCAATTGGAAA+TGG | 0.431883 | 6.2:-3870734 | MS.gene57115:CDS |
| ATAAGAAGGATATGCAAAAC+CGG | 0.432634 | 6.2:-3870864 | MS.gene57115:CDS |
| TCCTAAAAGGGTGTCAGAAC+AGG | 0.433413 | 6.2:+3866752 | None:intergenic |
| CTCGAGAACAAACCGGCGTC+AGG | 0.442676 | 6.2:-3867508 | MS.gene57115:CDS |
| CGTCGTGAACGTTTCCAAAA+CGG | 0.444644 | 6.2:+3868511 | None:intergenic |
| TGTTGTATCAACCATTGAAA+AGG | 0.450104 | 6.2:+3866130 | None:intergenic |
| ACGATCTTATGCGGCTTGAT+TGG | 0.450379 | 6.2:-3868312 | MS.gene57115:CDS |
| ATTTAATATGGCGACGTCAA+TGG | 0.452794 | 6.2:-3866457 | MS.gene57115:CDS |
| GTTACTTCTGGGCTCACATT+CGG | 0.454378 | 6.2:+3866192 | None:intergenic |
| GGGTTTCTTGTTGTGAGACT+GGG | 0.454469 | 6.2:+3868670 | None:intergenic |
| ATCGCATATCAGCCTGCAAC+TGG | 0.455568 | 6.2:+3868080 | None:intergenic |
| CATCAGATTGCATGTTAAAC+GGG | 0.456069 | 6.2:+3867990 | None:intergenic |
| TTTGCCGATGTCGACCTGAA+TGG | 0.458251 | 6.2:-3868130 | MS.gene57115:CDS |
| GGGTATGTCAACAAGGTTAA+CGG | 0.460510 | 6.2:-3868484 | MS.gene57115:CDS |
| CATCCACCGGACGGGACAAA+AGG | 0.461287 | 6.2:-3866295 | MS.gene57115:CDS |
| TTCTTTCTGGACTCTTCCTC+GGG | 0.461414 | 6.2:+3871904 | None:intergenic |
| CAGATCAAGCAAAGGTAGAA+AGG | 0.463747 | 6.2:-3871579 | MS.gene57115:CDS |
| AATGATTCGCAGAACTTTGA+CGG | 0.463926 | 6.2:+3866269 | None:intergenic |
| ACAAAAGACTCTAGAAGTGC+TGG | 0.467195 | 6.2:-3870327 | MS.gene57115:CDS |
| CGTCACATTTCGTTTCGTTA+GGG | 0.467481 | 6.2:+3868650 | None:intergenic |
| ATCCATTATTCAGAGAAATA+GGG | 0.469009 | 6.2:-3871512 | MS.gene57115:CDS |
| ATAGTTGCCCTAAGGGTTTG+AGG | 0.470104 | 6.2:-3868276 | MS.gene57115:CDS |
| TGTAATCTTGTATAGCCTGC+AGG | 0.473512 | 6.2:+3867421 | None:intergenic |
| GAATACCGCTGATTCTGATC+TGG | 0.476904 | 6.2:-3870381 | MS.gene57115:CDS |
| AAGTTCGAAAAGCCTCTTGT+CGG | 0.478197 | 6.2:-3868592 | MS.gene57115:CDS |
| CGAAGATTCCATGAAGAAGC+TGG | 0.481750 | 6.2:-3869761 | MS.gene57115:CDS |
| GATGCGTTATGTGCAGTTTG+TGG | 0.485154 | 6.2:-3866873 | MS.gene57115:CDS |
| AATAATTACCATAAAAGGTA+AGG | 0.486941 | 6.2:+3870268 | None:intergenic |
| AATGGAAGCTTGCAAGAAAA+GGG | 0.491625 | 6.2:-3866340 | MS.gene57115:CDS |
| TGGTATCTTGCCTCCAATTG+AGG | 0.492275 | 6.2:-3867620 | MS.gene57115:CDS |
| ATTGAAGATGCCTCCTCTGA+AGG | 0.494522 | 6.2:+3868435 | None:intergenic |
| TCCAAATACTCTTCTGCCAC+TGG | 0.496738 | 6.2:+3869699 | None:intergenic |
| TCATTTACATCGACAGGGGT+AGG | 0.501041 | 6.2:+3871964 | None:intergenic |
| GAACCCATAACTGAATTTGA+AGG | 0.501860 | 6.2:-3871415 | MS.gene57115:CDS |
| TTGAAGATGCCTCCTCTGAA+GGG | 0.504249 | 6.2:+3868436 | None:intergenic |
| GTATCTTGATAGTTGCCCTA+AGG | 0.504349 | 6.2:-3868284 | MS.gene57115:CDS |
| TTGTATAGCCTGCAGGGGAG+TGG | 0.507572 | 6.2:+3867428 | None:intergenic |
| TTCCATGGTACTTGATTCAT+CGG | 0.509123 | 6.2:-3866679 | MS.gene57115:CDS |
| CTAGAATTATATTCAGACTC+TGG | 0.509198 | 6.2:+3871748 | None:intergenic |
| TATCTTGATAGTTGCCCTAA+GGG | 0.509478 | 6.2:-3868283 | MS.gene57115:CDS |
| ATTCTCAACCACTCCCCTGC+AGG | 0.512949 | 6.2:-3867436 | MS.gene57115:CDS |
| AAGTGGCAACATTGAGAATG+AGG | 0.513026 | 6.2:-3869581 | MS.gene57115:CDS |
| ATGATTCGCAGAACTTTGAC+GGG | 0.514651 | 6.2:+3866270 | None:intergenic |
| TGTTGTGAGACTGGGACTTG+AGG | 0.514812 | 6.2:+3868678 | None:intergenic |
| CGCAGAACAAAGGTTGATGT+TGG | 0.516753 | 6.2:-3867640 | MS.gene57115:CDS |
| GGCTCTGCAATTTAGCAGCC+CGG | 0.517705 | 6.2:+3870845 | None:intergenic |
| TGGTGGCGAGGATGACTTTG+AGG | 0.517794 | 6.2:-3869611 | MS.gene57115:CDS |
| GATGGTAAAATGCCTAAGTC+GGG | 0.519661 | 6.2:-3870299 | MS.gene57115:CDS |
| GGTTACTATAGAAGATAAGA+AGG | 0.519918 | 6.2:-3870878 | MS.gene57115:CDS |
| GGAGAGACTGTAGGTAAGGG+AGG | 0.520665 | 6.2:+3867476 | None:intergenic |
| AACCCATAACTGAATTTGAA+GGG | 0.522266 | 6.2:-3871414 | MS.gene57115:CDS |
| CATTTACATCGACAGGGGTA+GGG | 0.523149 | 6.2:+3871965 | None:intergenic |
| ATGCCTCCTCTGAAGGGGCT+AGG | 0.523609 | 6.2:+3868442 | None:intergenic |
| CTAGAAGTGCTGGAGGAAGA+TGG | 0.524424 | 6.2:-3870317 | MS.gene57115:CDS |
| TAAGTCGGTTGTTCCTAAAA+GGG | 0.524800 | 6.2:+3866740 | None:intergenic |
| TTGATGAAAAGACAGATCTA+GGG | 0.527190 | 6.2:-3871471 | MS.gene57115:CDS |
| GTAATCAAACTATGAACAGT+TGG | 0.527859 | 6.2:+3866843 | None:intergenic |
| AGAAGAGTTCCGACAATCAA+CGG | 0.527943 | 6.2:-3872044 | MS.gene57115:CDS |
| GCGTAAAATTGTTGAGGAGG+AGG | 0.528992 | 6.2:-3867957 | MS.gene57115:CDS |
| GTCAAATGCATCCACCGGAC+GGG | 0.529042 | 6.2:-3866303 | MS.gene57115:CDS |
| CGACGAACATTAAATGGAGG+AGG | 0.529173 | 6.2:-3868159 | MS.gene57115:CDS |
| AGTGGATCCTCAAACCCTTA+GGG | 0.529703 | 6.2:+3868269 | None:intergenic |
| TATGGAGAGACTGTAGGTAA+GGG | 0.531957 | 6.2:+3867473 | None:intergenic |
| CATAGTTTGATTACAAAGTG+TGG | 0.535395 | 6.2:-3866834 | MS.gene57115:CDS |
| TGCTGTACAACCTCCTCGTA+AGG | 0.535923 | 6.2:-3866709 | MS.gene57115:CDS |
| CGATTTCATTTACATCGACA+GGG | 0.536263 | 6.2:+3871959 | None:intergenic |
| TTTCTGGCGAGGAACTGGTT+AGG | 0.536442 | 6.2:-3867576 | MS.gene57115:CDS |
| GAGAGATTGTTGAGAAAGAT+CGG | 0.537027 | 6.2:+3868105 | None:intergenic |
| ACAACGTGGTTTAGATAAGC+AGG | 0.540142 | 6.2:-3870522 | MS.gene57115:CDS |
| ATCAAAGCTGAAACTGAAAA+CGG | 0.540986 | 6.2:-3866405 | MS.gene57115:CDS |
| AAGGATAGCAATCCCGACTT+AGG | 0.541626 | 6.2:+3870287 | None:intergenic |
| GACTTTGAGGCCAAGAAAAG+TGG | 0.542359 | 6.2:-3869598 | MS.gene57115:CDS |
| GTAATCTTGTATAGCCTGCA+GGG | 0.544057 | 6.2:+3867422 | None:intergenic |
| TGGAAACGTTCACGACGTAA+GGG | 0.544869 | 6.2:-3868505 | MS.gene57115:CDS |
| ATCACTGCTGCTACTGTCCA+TGG | 0.544951 | 6.2:+3870430 | None:intergenic |
| ATACTAACAAGAAGAACCAC+TGG | 0.545770 | 6.2:+3866426 | None:intergenic |
| CGATAAAGGCAATCTAGGAC+AGG | 0.545958 | 6.2:+3872014 | None:intergenic |
| TCAAGCAAAGGTAGAAAGGA+AGG | 0.547003 | 6.2:-3871575 | MS.gene57115:CDS |
| TGCTTCTGCACGATCTTATG+CGG | 0.550462 | 6.2:-3868321 | MS.gene57115:CDS |
| ACAAGAATGCCTGAGGGCGG+AGG | 0.551479 | 6.2:-3870680 | MS.gene57115:intron |
| AGGAGTTGTGGTCCTGACGC+CGG | 0.552509 | 6.2:+3867496 | None:intergenic |
| ATCAAACTATGAACAGTTGG+AGG | 0.553793 | 6.2:+3866846 | None:intergenic |
| TGTTGTATAGATGCGTGGAT+TGG | 0.554770 | 6.2:-3869836 | MS.gene57115:intron |
| ACATATATACCTCCGCCCTC+AGG | 0.556163 | 6.2:+3870671 | None:intergenic |
| AGATGGTAAAATGCCTAAGT+CGG | 0.557838 | 6.2:-3870300 | MS.gene57115:CDS |
| TGATGGACATATTAGTATTG+AGG | 0.557901 | 6.2:-3871707 | MS.gene57115:CDS |
| CTTCTCAAGTACACGGCGAT+CGG | 0.559122 | 6.2:+3868612 | None:intergenic |
| AGATCGTGCAGAAGCAATGT+TGG | 0.559615 | 6.2:+3868328 | None:intergenic |
| TGTTCATGCACCACTTCCAA+AGG | 0.560412 | 6.2:-3871602 | MS.gene57115:CDS |
| TTAAAAGTGTTGCAGTTACA+GGG | 0.561082 | 6.2:+3871842 | None:intergenic |
| CTTCGTATTCTTGTACAGCA+AGG | 0.561676 | 6.2:+3869779 | None:intergenic |
| ATTGCATGTTAAACGGGTCG+AGG | 0.562264 | 6.2:+3867996 | None:intergenic |
| CATGATGTTGTGGAAGGTGA+TGG | 0.563306 | 6.2:-3871724 | MS.gene57115:CDS |
| ACGTTATCTCGAGAACAAAC+CGG | 0.564021 | 6.2:-3867515 | MS.gene57115:CDS |
| AGTTGCAGGCTGATATGCGA+TGG | 0.568469 | 6.2:-3868078 | MS.gene57115:CDS |
| GACATTTGGAAACGCGTGCA+AGG | 0.570108 | 6.2:+3866778 | None:intergenic |
| AATTACATTGCGCAGAACAA+AGG | 0.570385 | 6.2:-3867650 | MS.gene57115:CDS |
| GCATATCAGCCTGCAACTGG+TGG | 0.570912 | 6.2:+3868083 | None:intergenic |
| GGAAACGTTCACGACGTAAG+GGG | 0.571076 | 6.2:-3868504 | MS.gene57115:CDS |
| TGTAGGTAAGGGAGGAGTTG+TGG | 0.571870 | 6.2:+3867484 | None:intergenic |
| TCGTAAGGCTGAGTCTTCCA+TGG | 0.572228 | 6.2:-3866694 | MS.gene57115:CDS |
| CTCCTGAACATTCAAGACTT+CGG | 0.573966 | 6.2:-3871660 | MS.gene57115:CDS |
| AAGCTGAAACTGAAAACGGA+AGG | 0.580290 | 6.2:-3866401 | MS.gene57115:CDS |
| TCTATGTTGTCTGATGCTCA+TGG | 0.583561 | 6.2:-3868383 | MS.gene57115:CDS |
| GAGAAGAAGCGAAAGGAGAG+AGG | 0.585833 | 6.2:-3872105 | MS.gene57115:CDS |
| TAATTCTAGTCATGATGTTG+TGG | 0.586759 | 6.2:-3871734 | MS.gene57115:CDS |
| AAATACTCTTCTGCCACTGG+TGG | 0.587137 | 6.2:+3869702 | None:intergenic |
| AATATCGTAACAAAGAAGAT+CGG | 0.590061 | 6.2:-3868354 | MS.gene57115:CDS |
| TACAAGATTACAAGTTCATG+AGG | 0.590425 | 6.2:-3867410 | MS.gene57115:CDS |
| ATTCCAAAACGACAACTGCA+TGG | 0.593632 | 6.2:-3871798 | MS.gene57115:CDS |
| GGATCCATTCAGGTCGACAT+CGG | 0.595453 | 6.2:+3868126 | None:intergenic |
| TGATGATAGCACTTATGAAG+AGG | 0.598360 | 6.2:-3870411 | MS.gene57115:CDS |
| TTGCAATAACAGTGGTGGCG+AGG | 0.598885 | 6.2:-3869623 | MS.gene57115:CDS |
| TGTCAAATGCATCCACCGGA+CGG | 0.602750 | 6.2:-3866304 | MS.gene57115:CDS |
| TCAGACTCTGGATATAGAGT+CGG | 0.604014 | 6.2:+3871760 | None:intergenic |
| CATGGCAGAGAAGAAGCGAA+AGG | 0.604170 | 6.2:-3872112 | MS.gene57115:CDS |
| TCTTCAGCGTAAAATTGTTG+AGG | 0.607210 | 6.2:-3867963 | MS.gene57115:CDS |
| GGGCTGTCAAATGCATCCAC+CGG | 0.607984 | 6.2:-3866308 | MS.gene57115:CDS |
| CGGTTACCATGTTGAAGCTG+TGG | 0.608610 | 6.2:-3868572 | MS.gene57115:CDS |
| TCAGCGTAAAATTGTTGAGG+AGG | 0.609573 | 6.2:-3867960 | MS.gene57115:CDS |
| TCTACGAGAAATTGATCTTG+TGG | 0.609963 | 6.2:-3868212 | MS.gene57115:CDS |
| TCTTGATTTGGACGACGACA+AGG | 0.611455 | 6.2:-3871326 | MS.gene57115:intron |
| ATTCTTGCTCATAATAACGA+TGG | 0.612879 | 6.2:-3871358 | MS.gene57115:CDS |
| AAAGACTCTAGAAGTGCTGG+AGG | 0.614449 | 6.2:-3870324 | MS.gene57115:CDS |
| ACCATGTTGAAGCTGTGGAA+TGG | 0.615303 | 6.2:-3868567 | MS.gene57115:CDS |
| CACGCAGCTTATAACATCAG+TGG | 0.617183 | 6.2:-3867680 | MS.gene57115:intron |
| TCTTTGAAAATGTTCACTCA+CGG | 0.617431 | 6.2:+3870481 | None:intergenic |
| AAAACTACAGACTTTGTGGT+AGG | 0.621272 | 6.2:+3866600 | None:intergenic |
| AATTGATGCTGATAATAAGG+TGG | 0.623054 | 6.2:-3869659 | MS.gene57115:CDS |
| TGAAGATGCCTCCTCTGAAG+GGG | 0.624514 | 6.2:+3868437 | None:intergenic |
| GGATAATATGGAGAGACTGT+AGG | 0.625685 | 6.2:+3867467 | None:intergenic |
| GACGAACATTAAATGGAGGA+GGG | 0.628061 | 6.2:-3868158 | MS.gene57115:CDS |
| GTCCGATGAATCAAGTACCA+TGG | 0.628500 | 6.2:+3866677 | None:intergenic |
| AGCTGAAACTGAAAACGGAA+GGG | 0.631666 | 6.2:-3866400 | MS.gene57115:CDS |
| CGACCTAGCCCCTTCAGAGG+AGG | 0.633551 | 6.2:-3868445 | MS.gene57115:CDS |
| TTTCGAACTTCTCAAGTACA+CGG | 0.633759 | 6.2:+3868605 | None:intergenic |
| CGAAACGAAATGTGACGTGA+AGG | 0.635448 | 6.2:-3868644 | MS.gene57115:CDS |
| GGGAAGTGATCATCTGTTGA+AGG | 0.636349 | 6.2:-3869560 | MS.gene57115:CDS |
| ATGAGCATCAGACAACATAG+AGG | 0.637765 | 6.2:+3868385 | None:intergenic |
| CAGATTTCACAGTAAAACAG+TGG | 0.638939 | 6.2:+3868251 | None:intergenic |
| GTTCTCGAGATAACGTAGAA+GGG | 0.640463 | 6.2:+3867522 | None:intergenic |
| TGATTCATCGGACACTAACA+AGG | 0.641324 | 6.2:-3866667 | MS.gene57115:CDS |
| TCCATTCCACAGCTTCAACA+TGG | 0.641656 | 6.2:+3868566 | None:intergenic |
| TTTGTTGTTGTATAGATGCG+TGG | 0.641713 | 6.2:-3869841 | MS.gene57115:intron |
| TGGCAGAAGAGTATTTGGAA+TGG | 0.644354 | 6.2:-3869695 | MS.gene57115:CDS |
| CCATGAAACAAGAATGCCTG+AGG | 0.645835 | 6.2:-3870687 | MS.gene57115:CDS |
| GAACGACCTAGCCCCTTCAG+AGG | 0.647009 | 6.2:-3868448 | MS.gene57115:CDS |
| TAAGAAGGATATGCAAAACC+GGG | 0.648433 | 6.2:-3870863 | MS.gene57115:CDS |
| TCAACATGGTAACCGACAAG+AGG | 0.650573 | 6.2:+3868580 | None:intergenic |
| TCCAAAGGCAGATCAAGCAA+AGG | 0.653816 | 6.2:-3871587 | MS.gene57115:CDS |
| AGTGGCAACATTGAGAATGA+GGG | 0.656546 | 6.2:-3869580 | MS.gene57115:CDS |
| GAAACAAGAATGCCTGAGGG+CGG | 0.660036 | 6.2:-3870683 | MS.gene57115:CDS |
| ATGGAAGACTCAGCCTTACG+AGG | 0.660133 | 6.2:+3866696 | None:intergenic |
| TACAGCATATGAGAATAAGT+CGG | 0.662450 | 6.2:+3866725 | None:intergenic |
| TATCGACGAACATTAAATGG+AGG | 0.662474 | 6.2:-3868162 | MS.gene57115:CDS |
| AGTGGTTGAGAATTAGACGA+AGG | 0.669339 | 6.2:+3867446 | None:intergenic |
| TATTATCATTGACAGATACA+GGG | 0.671177 | 6.2:+3871869 | None:intergenic |
| GTTGCAGGCTGATATGCGAT+GGG | 0.673289 | 6.2:-3868077 | MS.gene57115:CDS |
| TCTAGTCATGATGTTGTGGA+AGG | 0.674139 | 6.2:-3871730 | MS.gene57115:CDS |
| GGTTTAGATAAGCAGGACGT+AGG | 0.675317 | 6.2:-3870515 | MS.gene57115:CDS |
| AAGAAGCTGGAGGATTCTGG+TGG | 0.675800 | 6.2:-3869748 | MS.gene57115:CDS |
| TAATCTTGTATAGCCTGCAG+GGG | 0.678789 | 6.2:+3867423 | None:intergenic |
| GACGCCAACAACCGACACAG+CGG | 0.681056 | 6.2:-3872081 | MS.gene57115:CDS |
| AGATTCCATGAAGAAGCTGG+AGG | 0.681890 | 6.2:-3869758 | MS.gene57115:CDS |
| CATGAAACAAGAATGCCTGA+GGG | 0.682352 | 6.2:-3870686 | MS.gene57115:CDS |
| ACGTAAGGGGTATGTCAACA+AGG | 0.683656 | 6.2:-3868491 | MS.gene57115:CDS |
| CATTATTCAGAGAAATAGGG+AGG | 0.684009 | 6.2:-3871509 | MS.gene57115:CDS |
| CAAAGAAACAAGTCACAAGG+TGG | 0.684255 | 6.2:-3871537 | MS.gene57115:CDS |
| TTTCTCAATAGCACTAGCCG+CGG | 0.685061 | 6.2:+3866479 | None:intergenic |
| ATACGAAGAAGAACTACCCG+AGG | 0.689446 | 6.2:-3871920 | MS.gene57115:CDS |
| CCCAGAAGTAACGTGTTGTG+CGG | 0.693004 | 6.2:-3866181 | MS.gene57115:CDS |
| TATCAAAGAAACAAGTCACA+AGG | 0.695225 | 6.2:-3871540 | MS.gene57115:CDS |
| CTTATCCAGATCAGAATCAG+CGG | 0.697066 | 6.2:+3870376 | None:intergenic |
| GATTTCATTTACATCGACAG+GGG | 0.702016 | 6.2:+3871960 | None:intergenic |
| AGCAAAGGTAGAAAGGAAGG+TGG | 0.702266 | 6.2:-3871572 | MS.gene57115:CDS |
| TCAAAAGTAGCATCCACCAG+TGG | 0.708282 | 6.2:-3869715 | MS.gene57115:CDS |
| GAAGACTCAGCCTTACGAGG+AGG | 0.718769 | 6.2:+3866699 | None:intergenic |
| GTCAATGGAAGATAAACCAG+TGG | 0.724126 | 6.2:-3866442 | MS.gene57115:CDS |
| CTTCAGCGTAAAATACAACG+TGG | 0.729032 | 6.2:-3870536 | MS.gene57115:CDS |
| CATTGCAAAGAACACCATCG+AGG | 0.734720 | 6.2:-3866250 | MS.gene57115:CDS |
| ATGACAAGCAAAGATCACGA+AGG | 0.757576 | 6.2:+3868026 | None:intergenic |
| CGTGAACGTTTCCAAAACGG+CGG | 0.764789 | 6.2:+3868514 | None:intergenic |
| GAATGGTAGAGATATGACCG+CGG | 0.794453 | 6.2:-3866496 | MS.gene57115:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAAATAATTACCATAAA+AGG | + | chr6.2:3867988-3868007 | None:intergenic | 10.0% |
| !! | AAATTTCTCTGTTAAATTAA+TGG | - | chr6.2:3867015-3867034 | MS.gene57115:intron | 15.0% |
| !! | AGAACATATATTACTTAAAA+AGG | + | chr6.2:3868137-3868156 | None:intergenic | 15.0% |
| !! | TGAAAAGAAAAAAGAAAAAA+AGG | + | chr6.2:3870381-3870400 | None:intergenic | 15.0% |
| !!! | AGTTGGAATTTTTTTAATAT+AGG | - | chr6.2:3869474-3869493 | MS.gene57115:intron | 15.0% |
| !!! | AGTTGGAATTTTTTTAATAT+AGG | + | chr6.2:3869493-3869474 | None:intergenic | 15.0% |
| !!! | ATTACAAACAGATAAATTTT+CGG | + | chr6.2:3868255-3868274 | None:intergenic | 15.0% |
| !! | AAAACAATAAAAATACTGAG+AGG | + | chr6.2:3867243-3867262 | None:intergenic | 20.0% |
| !! | AATAATTACCATAAAAGGTA+AGG | + | chr6.2:3867983-3868002 | None:intergenic | 20.0% |
| !! | ATAAATATCGTAACTATCAT+CGG | + | chr6.2:3868973-3868992 | None:intergenic | 20.0% |
| !! | ATATATGTATTCATCATAGT+TGG | + | chr6.2:3868183-3868202 | None:intergenic | 20.0% |
| !! | GATAGAGATTACATTTAAAT+AGG | - | chr6.2:3867061-3867080 | MS.gene57115:intron | 20.0% |
| !! | TCATATACAACAAAAAACAA+TGG | + | chr6.2:3867341-3867360 | None:intergenic | 20.0% |
| !! | TGCTATTGAGAAATTTAATA+TGG | - | chr6.2:3871779-3871798 | MS.gene57115:CDS | 20.0% |
| !!! | TACACTTTTTGCAATAAATA+TGG | + | chr6.2:3871440-3871459 | None:intergenic | 20.0% |
| !!! | TCAAACTTTTTCTTTAAATG+TGG | + | chr6.2:3871336-3871355 | None:intergenic | 20.0% |
| !!! | TTTTGGCAAAATTACTTAAA+AGG | + | chr6.2:3870957-3870976 | None:intergenic | 20.0% |
| ! | AACAATTGATGCTGATAATA+AGG | - | chr6.2:3868586-3868605 | MS.gene57115:CDS | 25.0% |
| ! | AAGTAAATGTGCATATAAGA+AGG | + | chr6.2:3870544-3870563 | None:intergenic | 25.0% |
| ! | AATAAAAATACTGAGAGGAA+GGG | + | chr6.2:3867238-3867257 | None:intergenic | 25.0% |
| ! | AATATATGTTCTATTGACAC+TGG | - | chr6.2:3868145-3868164 | MS.gene57115:CDS | 25.0% |
| ! | AATATCGTAACAAAGAAGAT+CGG | - | chr6.2:3869894-3869913 | MS.gene57115:intron | 25.0% |
| ! | AATCCATTATTCAGAGAAAT+AGG | - | chr6.2:3866735-3866754 | MS.gene57115:CDS | 25.0% |
| ! | AATTATCGACGAACATTAAA+TGG | - | chr6.2:3870083-3870102 | MS.gene57115:intron | 25.0% |
| ! | AATTATTGACGAAGGTTAAA+TGG | + | chr6.2:3868778-3868797 | None:intergenic | 25.0% |
| ! | AGTATTCCAAATGTATGAAT+AGG | - | chr6.2:3870991-3871010 | MS.gene57115:intron | 25.0% |
| ! | ATCCATTATTCAGAGAAATA+GGG | - | chr6.2:3866736-3866755 | MS.gene57115:CDS | 25.0% |
| ! | ATTAATTAACACACATGAGT+TGG | + | chr6.2:3869421-3869440 | None:intergenic | 25.0% |
| ! | ATTATCAGCATCAATTGTTT+GGG | + | chr6.2:3868585-3868604 | None:intergenic | 25.0% |
| ! | ATTGTTGGAAAAAACTTTGT+TGG | - | chr6.2:3871695-3871714 | MS.gene57115:CDS | 25.0% |
| ! | CAATGCATGTATATAAAGAT+GGG | + | chr6.2:3871198-3871217 | None:intergenic | 25.0% |
| ! | GTATTCCAAATGTATGAATA+GGG | - | chr6.2:3870992-3871011 | MS.gene57115:intron | 25.0% |
| ! | GTTTAGAAAAATGTATACCA+TGG | - | chr6.2:3867801-3867820 | MS.gene57115:intron | 25.0% |
| ! | TAATTCGATGTTATCATTGT+TGG | - | chr6.2:3871680-3871699 | MS.gene57115:CDS | 25.0% |
| ! | TATTATCAGCATCAATTGTT+TGG | + | chr6.2:3868586-3868605 | None:intergenic | 25.0% |
| ! | TATTATCATTGACAGATACA+GGG | + | chr6.2:3866382-3866401 | None:intergenic | 25.0% |
| ! | TATTCCAAATGTATGAATAG+GGG | - | chr6.2:3870993-3871012 | MS.gene57115:intron | 25.0% |
| ! | TATTTATTATCCATGAGCAT+CGG | - | chr6.2:3868986-3869005 | MS.gene57115:intron | 25.0% |
| ! | TCAATGCATGTATATAAAGA+TGG | + | chr6.2:3871199-3871218 | None:intergenic | 25.0% |
| ! | TTATTATCATTGACAGATAC+AGG | + | chr6.2:3866383-3866402 | None:intergenic | 25.0% |
| !! | AAATGATTTTCTACCTCAAT+TGG | + | chr6.2:3870644-3870663 | None:intergenic | 25.0% |
| !! | AATCATTTTATTCAGCTTTC+TGG | - | chr6.2:3870656-3870675 | MS.gene57115:intron | 25.0% |
| !! | ACTGCATTTCTTTTTCTTTT+TGG | + | chr6.2:3870974-3870993 | None:intergenic | 25.0% |
| !! | ATATATCTTTTGCACATGTT+TGG | - | chr6.2:3868197-3868216 | MS.gene57115:CDS | 25.0% |
| !! | ATTTTCTGCTATTCCAAATA+TGG | - | chr6.2:3868273-3868292 | MS.gene57115:CDS | 25.0% |
| !! | CTTTAACAAACGATATGTTT+TGG | + | chr6.2:3867477-3867496 | None:intergenic | 25.0% |
| !! | TTGCAATTCAATAATTTGCA+AGG | + | chr6.2:3867196-3867215 | None:intergenic | 25.0% |
| !! | TTTTGAACTTCTTAAGTTCA+CGG | - | chr6.2:3869218-3869237 | MS.gene57115:intron | 25.0% |
| !!! | ACTTTTAAAACTAAAACCAC+CGG | + | chr6.2:3871150-3871169 | None:intergenic | 25.0% |
| !!! | AGGTTTTTTCCAATCATAAA+AGG | + | chr6.2:3867102-3867121 | None:intergenic | 25.0% |
| !!! | ATCTCTTTTTTCAACGATAA+AGG | + | chr6.2:3866251-3866270 | None:intergenic | 25.0% |
| !!! | GGTTTTAGTTTTAAAAGTGA+AGG | - | chr6.2:3871152-3871171 | MS.gene57115:intron | 25.0% |
| !!! | TTTTAAAAGTGAAGGAAAGA+TGG | - | chr6.2:3871160-3871179 | MS.gene57115:intron | 25.0% |
| AAAGTCTTCTCAATTGGAAA+TGG | - | chr6.2:3867514-3867533 | MS.gene57115:CDS | 30.0% | |
| AACCCATAACTGAATTTGAA+GGG | - | chr6.2:3866834-3866853 | MS.gene57115:CDS | 30.0% | |
| AACTGAATTTGAAGGGAAAA+TGG | - | chr6.2:3866841-3866860 | MS.gene57115:CDS | 30.0% | |
| AATTGATGCTGATAATAAGG+TGG | - | chr6.2:3868589-3868608 | MS.gene57115:CDS | 30.0% | |
| AGGGGAACACTAAATTAAAT+GGG | - | chr6.2:3871011-3871030 | MS.gene57115:intron | 30.0% | |
| ATAAAATCAAATGCCATGCT+TGG | + | chr6.2:3871249-3871268 | None:intergenic | 30.0% | |
| ATAAGAAGGATATGCAAAAC+CGG | - | chr6.2:3867384-3867403 | MS.gene57115:intron | 30.0% | |
| ATCAAAGCTGAAACTGAAAA+CGG | - | chr6.2:3871843-3871862 | MS.gene57115:CDS | 30.0% | |
| ATGCGTTCCTAAAATAAGTT+GGG | + | chr6.2:3867661-3867680 | None:intergenic | 30.0% | |
| ATTCTTGCTCATAATAACGA+TGG | - | chr6.2:3866890-3866909 | MS.gene57115:CDS | 30.0% | |
| ATTGTATCTTTCTACATAGC+TGG | + | chr6.2:3867275-3867294 | None:intergenic | 30.0% | |
| CAATAAAAATACTGAGAGGA+AGG | + | chr6.2:3867239-3867258 | None:intergenic | 30.0% | |
| CATAGTTTGATTACAAAGTG+TGG | - | chr6.2:3871414-3871433 | MS.gene57115:CDS | 30.0% | |
| CTAGAATTATATTCAGACTC+TGG | + | chr6.2:3866503-3866522 | None:intergenic | 30.0% | |
| CTATACAACAACAAATCAGA+TGG | + | chr6.2:3868402-3868421 | None:intergenic | 30.0% | |
| CTTCAGATATAACATGTTCT+TGG | - | chr6.2:3870467-3870486 | MS.gene57115:CDS | 30.0% | |
| GAATTAGACGAAGGATAATA+TGG | + | chr6.2:3870796-3870815 | None:intergenic | 30.0% | |
| GGGTAACTAGTATTTATTTC+AGG | + | chr6.2:3868032-3868051 | None:intergenic | 30.0% | |
| GGTTACTATAGAAGATAAGA+AGG | - | chr6.2:3867370-3867389 | MS.gene57115:intron | 30.0% | |
| GTAATCAAACTATGAACAGT+TGG | + | chr6.2:3871408-3871427 | None:intergenic | 30.0% | |
| GTCATAACGTTTATTCTTTC+TGG | + | chr6.2:3866360-3866379 | None:intergenic | 30.0% | |
| TAATTCTAGTCATGATGTTG+TGG | - | chr6.2:3866514-3866533 | MS.gene57115:CDS | 30.0% | |
| TACAAGATTACAAGTTCATG+AGG | - | chr6.2:3870838-3870857 | MS.gene57115:CDS | 30.0% | |
| TACAGCATATGAGAATAAGT+CGG | + | chr6.2:3871526-3871545 | None:intergenic | 30.0% | |
| TAGGGGAACACTAAATTAAA+TGG | - | chr6.2:3871010-3871029 | MS.gene57115:intron | 30.0% | |
| TATCAAAGAAACAAGTCACA+AGG | - | chr6.2:3866708-3866727 | MS.gene57115:CDS | 30.0% | |
| TATTAACAATTCACGTGAGT+TGG | - | chr6.2:3869457-3869476 | MS.gene57115:intron | 30.0% | |
| TCAAATCGTATTAGATCTAC+AGG | - | chr6.2:3868830-3868849 | MS.gene57115:intron | 30.0% | |
| TCATCAGATTGCATGTTAAA+CGG | + | chr6.2:3870262-3870281 | None:intergenic | 30.0% | |
| TCATTTCATGACGAAAAAGA+AGG | + | chr6.2:3867427-3867446 | None:intergenic | 30.0% | |
| TCTCAATGAATTATTGACGA+AGG | + | chr6.2:3868786-3868805 | None:intergenic | 30.0% | |
| TGAAAAAACTACAGACTTTG+TGG | + | chr6.2:3871655-3871674 | None:intergenic | 30.0% | |
| TGGTTTACGACAGAAAATTA+TGG | - | chr6.2:3868293-3868312 | MS.gene57115:CDS | 30.0% | |
| TGTTGTATATGATGCTTGAT+AGG | - | chr6.2:3867349-3867368 | MS.gene57115:intron | 30.0% | |
| TTCATATCAAAAAGACACAG+AGG | + | chr6.2:3871735-3871754 | None:intergenic | 30.0% | |
| TTCCCTTCAAATTCAGTTAT+GGG | + | chr6.2:3866839-3866858 | None:intergenic | 30.0% | |
| TTGATGAAAAGACAGATCTA+GGG | - | chr6.2:3866777-3866796 | MS.gene57115:CDS | 30.0% | |
| TTTCCCTTCAAATTCAGTTA+TGG | + | chr6.2:3866840-3866859 | None:intergenic | 30.0% | |
| TTTCTGTCGTAAACCATATT+TGG | + | chr6.2:3868289-3868308 | None:intergenic | 30.0% | |
| TTTCTTTAAATGTGGCTTCT+GGG | + | chr6.2:3871328-3871347 | None:intergenic | 30.0% | |
| TTTGACATTTCGTTTCGTTA+GGG | - | chr6.2:3869277-3869296 | MS.gene57115:intron | 30.0% | |
| TTTGATGAAAAGACAGATCT+AGG | - | chr6.2:3866776-3866795 | MS.gene57115:CDS | 30.0% | |
| ! | ATTGCTATCCTTACCTTTTA+TGG | - | chr6.2:3867972-3867991 | MS.gene57115:CDS | 30.0% |
| ! | ATTTAAGACATAGTCTCTGT+GGG | + | chr6.2:3868088-3868107 | None:intergenic | 30.0% |
| ! | CTACTAGTCTAGATACATTA+AGG | + | chr6.2:3870927-3870946 | None:intergenic | 30.0% |
| ! | CTGTGTCTTTTTGATATGAA+TGG | - | chr6.2:3871735-3871754 | MS.gene57115:CDS | 30.0% |
| ! | GAAATGAGTTTCCTTTTCAA+TGG | - | chr6.2:3872107-3872126 | MS.gene57115:CDS | 30.0% |
| ! | GATAAGTTTTGCAATAACAG+TGG | - | chr6.2:3868617-3868636 | MS.gene57115:CDS | 30.0% |
| ! | GTTGTTCTACCTTTTATGAT+TGG | - | chr6.2:3867090-3867109 | MS.gene57115:intron | 30.0% |
| ! | TATTTAAGACATAGTCTCTG+TGG | + | chr6.2:3868089-3868108 | None:intergenic | 30.0% |
| ! | TCTTTGAAAATGTTCACTCA+CGG | + | chr6.2:3867770-3867789 | None:intergenic | 30.0% |
| ! | TGATGGACATATTAGTATTG+AGG | - | chr6.2:3866541-3866560 | MS.gene57115:CDS | 30.0% |
| ! | TGGAGTTTTTGTGGTTTATT+TGG | - | chr6.2:3871065-3871084 | MS.gene57115:intron | 30.0% |
| ! | TTTTCTTTAAATGTGGCTTC+TGG | + | chr6.2:3871329-3871348 | None:intergenic | 30.0% |
| ! | TTTTGACATTTCGTTTCGTT+AGG | - | chr6.2:3869276-3869295 | MS.gene57115:intron | 30.0% |
| !! | ATTAAAAGTGTTGCAGTTAC+AGG | + | chr6.2:3866410-3866429 | None:intergenic | 30.0% |
| !! | TCTTTTTCGTCATGAAATGA+AGG | - | chr6.2:3867427-3867446 | MS.gene57115:CDS | 30.0% |
| !! | TTAAAAGTGTTGCAGTTACA+GGG | + | chr6.2:3866409-3866428 | None:intergenic | 30.0% |
| !!! | CTTTTAAAACTAAAACCACC+GGG | + | chr6.2:3871149-3871168 | None:intergenic | 30.0% |
| !!! | TGAAAGTCAACTTTTTTTCG+AGG | + | chr6.2:3870202-3870221 | None:intergenic | 30.0% |
| AAAACTACAGACTTTGTGGT+AGG | + | chr6.2:3871651-3871670 | None:intergenic | 35.0% | |
| AATGATTCGCAGAACTTTGA+CGG | + | chr6.2:3871982-3872001 | None:intergenic | 35.0% | |
| AATGGAAGCTTGCAAGAAAA+GGG | - | chr6.2:3871908-3871927 | MS.gene57115:CDS | 35.0% | |
| AATTACATTGCGCAGAACAA+AGG | - | chr6.2:3870598-3870617 | MS.gene57115:intron | 35.0% | |
| ACGAAATGTCAAAAAGAGCA+AGG | + | chr6.2:3869270-3869289 | None:intergenic | 35.0% | |
| AGAGGAAGGGAGATTAAATA+GGG | + | chr6.2:3867225-3867244 | None:intergenic | 35.0% | |
| AGATGGTAAAATGCCTAAGT+CGG | - | chr6.2:3867948-3867967 | MS.gene57115:intron | 35.0% | |
| ATAAGTCGGTTGTTCCTAAA+AGG | + | chr6.2:3871512-3871531 | None:intergenic | 35.0% | |
| ATAATGTCTATCACCAAGCA+TGG | - | chr6.2:3871233-3871252 | MS.gene57115:intron | 35.0% | |
| ATACTAACAAGAAGAACCAC+TGG | + | chr6.2:3871825-3871844 | None:intergenic | 35.0% | |
| ATCAAACTATGAACAGTTGG+AGG | + | chr6.2:3871405-3871424 | None:intergenic | 35.0% | |
| ATGAAGAAAACAACGCATTC+AGG | - | chr6.2:3868720-3868739 | MS.gene57115:intron | 35.0% | |
| ATGTTCTATTGACACTGGAA+AGG | - | chr6.2:3868150-3868169 | MS.gene57115:CDS | 35.0% | |
| ATTTAATATGGCGACGTCAA+TGG | - | chr6.2:3871791-3871810 | MS.gene57115:CDS | 35.0% | |
| CAGATTTCACAGTAAAACAG+TGG | + | chr6.2:3870000-3870019 | None:intergenic | 35.0% | |
| CATCAGATTGCATGTTAAAC+GGG | + | chr6.2:3870261-3870280 | None:intergenic | 35.0% | |
| CATGCGTTCCTAAAATAAGT+TGG | + | chr6.2:3867662-3867681 | None:intergenic | 35.0% | |
| CATTATTCAGAGAAATAGGG+AGG | - | chr6.2:3866739-3866758 | MS.gene57115:CDS | 35.0% | |
| CGAAATGTCAAAAAGAGCAA+GGG | + | chr6.2:3869269-3869288 | None:intergenic | 35.0% | |
| CGATTTCATTTACATCGACA+GGG | + | chr6.2:3866292-3866311 | None:intergenic | 35.0% | |
| CTAGATACATTAAGGAACCT+GGG | + | chr6.2:3870919-3870938 | None:intergenic | 35.0% | |
| CTCCAAAAATCTGTTACTGT+TGG | - | chr6.2:3871045-3871064 | MS.gene57115:intron | 35.0% | |
| CTTCAATGACTGTAAAGCTT+TGG | - | chr6.2:3869829-3869848 | MS.gene57115:CDS | 35.0% | |
| CTTCAATGACTGTAAAGCTT+TGG | + | chr6.2:3869848-3869829 | None:intergenic | 35.0% | |
| GAAAGCAAAGTCTTCTCAAT+TGG | - | chr6.2:3867508-3867527 | MS.gene57115:CDS | 35.0% | |
| GAACCCATAACTGAATTTGA+AGG | - | chr6.2:3866833-3866852 | MS.gene57115:CDS | 35.0% | |
| GACACAAACAAAAAAGTCCA+TGG | - | chr6.2:3867689-3867708 | MS.gene57115:intron | 35.0% | |
| GAGAGATTGTTGAGAAAGAT+CGG | + | chr6.2:3870146-3870165 | None:intergenic | 35.0% | |
| GATTTCATTTACATCGACAG+GGG | + | chr6.2:3866291-3866310 | None:intergenic | 35.0% | |
| GTTGGAAAAAACTTTGTTGG+AGG | - | chr6.2:3871698-3871717 | MS.gene57115:CDS | 35.0% | |
| TAAGAAGGATATGCAAAACC+GGG | - | chr6.2:3867385-3867404 | MS.gene57115:intron | 35.0% | |
| TAAGTCGGTTGTTCCTAAAA+GGG | + | chr6.2:3871511-3871530 | None:intergenic | 35.0% | |
| TAATGGAAGCTTGCAAGAAA+AGG | - | chr6.2:3871907-3871926 | MS.gene57115:CDS | 35.0% | |
| TACAACAACAAATCAGATGG+AGG | + | chr6.2:3868399-3868418 | None:intergenic | 35.0% | |
| TATCGACGAACATTAAATGG+AGG | - | chr6.2:3870086-3870105 | MS.gene57115:intron | 35.0% | |
| TCGATTTCATTTACATCGAC+AGG | + | chr6.2:3866293-3866312 | None:intergenic | 35.0% | |
| TCTACGAGAAATTGATCTTG+TGG | - | chr6.2:3870036-3870055 | MS.gene57115:intron | 35.0% | |
| TCTAGATACATTAAGGAACC+TGG | + | chr6.2:3870920-3870939 | None:intergenic | 35.0% | |
| TCTTCAGCGTAAAATTGTTG+AGG | - | chr6.2:3870285-3870304 | MS.gene57115:CDS | 35.0% | |
| TGACGAAGGTTAAATGGAAA+TGG | + | chr6.2:3868772-3868791 | None:intergenic | 35.0% | |
| TGATGATAGCACTTATGAAG+AGG | - | chr6.2:3867837-3867856 | MS.gene57115:intron | 35.0% | |
| TGCGTCTAATGTCTACTTAA+TGG | - | chr6.2:3871890-3871909 | MS.gene57115:CDS | 35.0% | |
| TGGATTTCACATTCAAACAG+TGG | - | chr6.2:3868861-3868880 | MS.gene57115:intron | 35.0% | |
| TGTTCCCCTATTCATACATT+TGG | + | chr6.2:3871000-3871019 | None:intergenic | 35.0% | |
| TGTTCTATTGACACTGGAAA+GGG | - | chr6.2:3868151-3868170 | MS.gene57115:CDS | 35.0% | |
| TTCAACGATAAAGGCAATCT+AGG | + | chr6.2:3866242-3866261 | None:intergenic | 35.0% | |
| TTCCATGGTACTTGATTCAT+CGG | - | chr6.2:3871569-3871588 | MS.gene57115:CDS | 35.0% | |
| TTTCGAACTTCTCAAGTACA+CGG | + | chr6.2:3869646-3869665 | None:intergenic | 35.0% | |
| TTTCTACATAGCTGGTTAAG+AGG | + | chr6.2:3867267-3867286 | None:intergenic | 35.0% | |
| ! | AAGTTTTGCAATAACAGTGG+TGG | - | chr6.2:3868620-3868639 | MS.gene57115:CDS | 35.0% |
| ! | ACAAGAGATACAAGTTGACA+TGG | + | chr6.2:3871097-3871116 | None:intergenic | 35.0% |
| ! | ATAAGTTGGGAAGTGAGAAA+AGG | + | chr6.2:3867648-3867667 | None:intergenic | 35.0% |
| ! | CAAGTTCATGAGGATTTTGA+AGG | - | chr6.2:3870848-3870867 | MS.gene57115:CDS | 35.0% |
| ! | CTCCAACAGTAACAGATTTT+TGG | + | chr6.2:3871050-3871069 | None:intergenic | 35.0% |
| ! | CTCCCTATTTCTCTGAATAA+TGG | + | chr6.2:3866741-3866760 | None:intergenic | 35.0% |
| ! | CTCTTGTTTGTTTACACTTG+TGG | - | chr6.2:3871110-3871129 | MS.gene57115:intron | 35.0% |
| ! | TAGATCTACAGGTTTGAAGT+TGG | - | chr6.2:3868841-3868860 | MS.gene57115:intron | 35.0% |
| ! | TATCTTGATAGTTGCCCTAA+GGG | - | chr6.2:3869965-3869984 | MS.gene57115:intron | 35.0% |
| ! | TCATGATTGCATTTTTCTGC+TGG | - | chr6.2:3870398-3870417 | MS.gene57115:CDS | 35.0% |
| ! | TGAACATTTTCAAAGACACG+AGG | - | chr6.2:3867774-3867793 | MS.gene57115:intron | 35.0% |
| ! | TGATTTTCTACCTCAATTGG+AGG | + | chr6.2:3870641-3870660 | None:intergenic | 35.0% |
| ! | TGTTACTGTTGGAGTTTTTG+TGG | - | chr6.2:3871056-3871075 | MS.gene57115:intron | 35.0% |
| !! | ATGCGTTGTTTTCTTCATTG+AGG | + | chr6.2:3868718-3868737 | None:intergenic | 35.0% |
| !! | CAACAGTAACAGATTTTTGG+AGG | + | chr6.2:3871047-3871066 | None:intergenic | 35.0% |
| !! | CTCACTTCCCAACTTATTTT+AGG | - | chr6.2:3867651-3867670 | MS.gene57115:CDS | 35.0% |
| !! | GATCTAGGGTTTTCAACTAT+AGG | - | chr6.2:3866791-3866810 | MS.gene57115:CDS | 35.0% |
| !! | TGGTGTTAGTCTTCTTGATT+TGG | - | chr6.2:3866910-3866929 | MS.gene57115:CDS | 35.0% |
| !! | TTTGTTGTTGTATAGATGCG+TGG | - | chr6.2:3868407-3868426 | MS.gene57115:CDS | 35.0% |
| !!! | CTCTAGTATTTTTTCCTCGA+TGG | + | chr6.2:3872015-3872034 | None:intergenic | 35.0% |
| !!! | CTTGGCTTTTTAGTTGCTAT+TGG | - | chr6.2:3870485-3870504 | MS.gene57115:CDS | 35.0% |
| AACCGAAGTCTTGAATGTTC+AGG | + | chr6.2:3866593-3866612 | None:intergenic | 40.0% | |
| AAGCTGAAACTGAAAACGGA+AGG | - | chr6.2:3871847-3871866 | MS.gene57115:CDS | 40.0% | |
| AAGTGGCAACATTGAGAATG+AGG | - | chr6.2:3868667-3868686 | MS.gene57115:CDS | 40.0% | |
| AAGTTCGAAAAGCCTCTTGT+CGG | - | chr6.2:3869656-3869675 | MS.gene57115:CDS | 40.0% | |
| ACAACGTGGTTTAGATAAGC+AGG | - | chr6.2:3867726-3867745 | MS.gene57115:intron | 40.0% | |
| ACATTAAGGAACCTGGGAAA+AGG | + | chr6.2:3870913-3870932 | None:intergenic | 40.0% | |
| ACGTCACATTTCGTTTCGTT+AGG | + | chr6.2:3869602-3869621 | None:intergenic | 40.0% | |
| ACGTTATCTCGAGAACAAAC+CGG | - | chr6.2:3870733-3870752 | MS.gene57115:CDS | 40.0% | |
| AGAAGAGTTCCGACAATCAA+CGG | - | chr6.2:3866204-3866223 | MS.gene57115:CDS | 40.0% | |
| AGATATACACACACCATCAG+AGG | + | chr6.2:3868057-3868076 | None:intergenic | 40.0% | |
| AGCTGAAACTGAAAACGGAA+GGG | - | chr6.2:3871848-3871867 | MS.gene57115:CDS | 40.0% | |
| AGGTTAAATGGAAATGGAGG+AGG | + | chr6.2:3868766-3868785 | None:intergenic | 40.0% | |
| AGTGGCAACATTGAGAATGA+GGG | - | chr6.2:3868668-3868687 | MS.gene57115:CDS | 40.0% | |
| AGTGGTTGAGAATTAGACGA+AGG | + | chr6.2:3870805-3870824 | None:intergenic | 40.0% | |
| ATATGGAGAGACTGTAGGTA+AGG | + | chr6.2:3870779-3870798 | None:intergenic | 40.0% | |
| ATGACAAGCAAAGATCACGA+AGG | + | chr6.2:3870225-3870244 | None:intergenic | 40.0% | |
| ATGAGCATCAGACAACATAG+AGG | + | chr6.2:3869866-3869885 | None:intergenic | 40.0% | |
| ATGATTCGCAGAACTTTGAC+GGG | + | chr6.2:3871981-3872000 | None:intergenic | 40.0% | |
| ATTCCAAAACGACAACTGCA+TGG | - | chr6.2:3866450-3866469 | MS.gene57115:CDS | 40.0% | |
| ATTCTTTCTGGACTCTTCCT+CGG | + | chr6.2:3866348-3866367 | None:intergenic | 40.0% | |
| CAAAGAAACAAGTCACAAGG+TGG | - | chr6.2:3866711-3866730 | MS.gene57115:CDS | 40.0% | |
| CAAGAAAAGGGCTGAGAAAT+GGG | - | chr6.2:3871920-3871939 | MS.gene57115:CDS | 40.0% | |
| CAGATCAAGCAAAGGTAGAA+AGG | - | chr6.2:3866669-3866688 | MS.gene57115:CDS | 40.0% | |
| CATAGTAGTAGTTGCCCTAA+GGG | + | chr6.2:3868896-3868915 | None:intergenic | 40.0% | |
| CATGAAACAAGAATGCCTGA+GGG | - | chr6.2:3867562-3867581 | MS.gene57115:CDS | 40.0% | |
| CATTAAGGAACCTGGGAAAA+GGG | + | chr6.2:3870912-3870931 | None:intergenic | 40.0% | |
| CGAAGGTTAAATGGAAATGG+AGG | + | chr6.2:3868769-3868788 | None:intergenic | 40.0% | |
| CGTCACATTTCGTTTCGTTA+GGG | + | chr6.2:3869601-3869620 | None:intergenic | 40.0% | |
| CTCCTGAACATTCAAGACTT+CGG | - | chr6.2:3866588-3866607 | MS.gene57115:CDS | 40.0% | |
| CTTATCCAGATCAGAATCAG+CGG | + | chr6.2:3867875-3867894 | None:intergenic | 40.0% | |
| CTTCAGCGTAAAATACAACG+TGG | - | chr6.2:3867712-3867731 | MS.gene57115:intron | 40.0% | |
| CTTCGTATTCTTGTACAGCA+AGG | + | chr6.2:3868472-3868491 | None:intergenic | 40.0% | |
| GAAAAAACTTTGTTGGAGGC+AGG | - | chr6.2:3871702-3871721 | MS.gene57115:CDS | 40.0% | |
| GACGAACATTAAATGGAGGA+GGG | - | chr6.2:3870090-3870109 | MS.gene57115:intron | 40.0% | |
| GAGAGGAAGGGAGATTAAAT+AGG | + | chr6.2:3867226-3867245 | None:intergenic | 40.0% | |
| GATGGTAAAATGCCTAAGTC+GGG | - | chr6.2:3867949-3867968 | MS.gene57115:intron | 40.0% | |
| GCATATTCATTAGCAGCTTC+AGG | + | chr6.2:3867542-3867561 | None:intergenic | 40.0% | |
| GGAAAAAACCTTGACTGTTG+AGG | - | chr6.2:3867111-3867130 | MS.gene57115:intron | 40.0% | |
| GGATAATATGGAGAGACTGT+AGG | + | chr6.2:3870784-3870803 | None:intergenic | 40.0% | |
| GGGTATGTCAACAAGGTTAA+CGG | - | chr6.2:3869764-3869783 | MS.gene57115:CDS | 40.0% | |
| GGTTAAATGGAAATGGAGGA+GGG | + | chr6.2:3868765-3868784 | None:intergenic | 40.0% | |
| GTAATCTTGTATAGCCTGCA+GGG | + | chr6.2:3870829-3870848 | None:intergenic | 40.0% | |
| GTCAATGGAAGATAAACCAG+TGG | - | chr6.2:3871806-3871825 | MS.gene57115:CDS | 40.0% | |
| GTCAGAACAGGTAAGACATT+TGG | + | chr6.2:3871487-3871506 | None:intergenic | 40.0% | |
| GTTCTCGAGATAACGTAGAA+GGG | + | chr6.2:3870729-3870748 | None:intergenic | 40.0% | |
| TAATCTTGTATAGCCTGCAG+GGG | + | chr6.2:3870828-3870847 | None:intergenic | 40.0% | |
| TATGGAGAGACTGTAGGTAA+GGG | + | chr6.2:3870778-3870797 | None:intergenic | 40.0% | |
| TCAAGCAAAGGTAGAAAGGA+AGG | - | chr6.2:3866673-3866692 | MS.gene57115:CDS | 40.0% | |
| TCAGACTCTGGATATAGAGT+CGG | + | chr6.2:3866491-3866510 | None:intergenic | 40.0% | |
| TCAGCGTAAAATTGTTGAGG+AGG | - | chr6.2:3870288-3870307 | MS.gene57115:CDS | 40.0% | |
| TCATAGTAGTAGTTGCCCTA+AGG | + | chr6.2:3868897-3868916 | None:intergenic | 40.0% | |
| TCATAGTTCCTCAACAGTCA+AGG | + | chr6.2:3867122-3867141 | None:intergenic | 40.0% | |
| TCCATAAATGCTAAACGCAG+AGG | + | chr6.2:3866988-3867007 | None:intergenic | 40.0% | |
| TCCTCTGCGTTTAGCATTTA+TGG | - | chr6.2:3866984-3867003 | MS.gene57115:intron | 40.0% | |
| TCTAGTCATGATGTTGTGGA+AGG | - | chr6.2:3866518-3866537 | MS.gene57115:CDS | 40.0% | |
| TCTATGTTGTCTGATGCTCA+TGG | - | chr6.2:3869865-3869884 | MS.gene57115:intron | 40.0% | |
| TGACTGTTGAGGAACTATGA+TGG | - | chr6.2:3867122-3867141 | MS.gene57115:intron | 40.0% | |
| TGATTCATCGGACACTAACA+AGG | - | chr6.2:3871581-3871600 | MS.gene57115:CDS | 40.0% | |
| TGTAATCTTGTATAGCCTGC+AGG | + | chr6.2:3870830-3870849 | None:intergenic | 40.0% | |
| TGTTCTCGAGATAACGTAGA+AGG | + | chr6.2:3870730-3870749 | None:intergenic | 40.0% | |
| TGTTGTATAGATGCGTGGAT+TGG | - | chr6.2:3868412-3868431 | MS.gene57115:CDS | 40.0% | |
| TTGATCAGAGAGCAGAATGA+AGG | + | chr6.2:3869726-3869707 | None:intergenic | 40.0% | |
| ! | ACAAAAGACTCTAGAAGTGC+TGG | - | chr6.2:3867921-3867940 | MS.gene57115:intron | 40.0% |
| ! | GAAGCATACATGAGTTGAAG+AGG | + | chr6.2:3870451-3870470 | None:intergenic | 40.0% |
| ! | GTATCTTGATAGTTGCCCTA+AGG | - | chr6.2:3869964-3869983 | MS.gene57115:intron | 40.0% |
| ! | TGTATTTTACGCTGAAGCCA+TGG | + | chr6.2:3867709-3867728 | None:intergenic | 40.0% |
| !! | ATAATTTGCACCCTTTTCCC+AGG | - | chr6.2:3870899-3870918 | MS.gene57115:intron | 40.0% |
| !! | ATTCCATGCAGTTGTCGTTT+TGG | + | chr6.2:3866456-3866475 | None:intergenic | 40.0% |
| !! | GAGCGTCTTGAAGAGTATTA+AGG | + | chr6.2:3866571-3866590 | None:intergenic | 40.0% |
| !! | GGTTTTCTTCCGTTGATTGT+CGG | + | chr6.2:3866216-3866235 | None:intergenic | 40.0% |
| !! | TGGCAGAAGAGTATTTGGAA+TGG | - | chr6.2:3868553-3868572 | MS.gene57115:CDS | 40.0% |
| !! | TTTTATTCAGCTTTCTGGCG+AGG | - | chr6.2:3870661-3870680 | MS.gene57115:intron | 40.0% |
| !!! | ACTTCTTTTTTCCGCTGTGT+CGG | + | chr6.2:3866181-3866200 | None:intergenic | 40.0% |
| !!! | CTCAATGTTGCCACTTTTCT+TGG | + | chr6.2:3868663-3868682 | None:intergenic | 40.0% |
| !!! | TTTTCTGCTGGTTGATGAAG+AGG | - | chr6.2:3870410-3870429 | MS.gene57115:CDS | 40.0% |
| AAAAAGAGCAAGGGACGTGA+AGG | + | chr6.2:3869260-3869279 | None:intergenic | 45.0% | |
| AAATACTCTTCTGCCACTGG+TGG | + | chr6.2:3868549-3868568 | None:intergenic | 45.0% | |
| AAGGATAGCAATCCCGACTT+AGG | + | chr6.2:3867964-3867983 | None:intergenic | 45.0% | |
| AATTGTTGAGGAGGAGGAAG+AGG | - | chr6.2:3870297-3870316 | MS.gene57115:CDS | 45.0% | |
| ACCATGTTGAAGCTGTGGAA+TGG | - | chr6.2:3869681-3869700 | MS.gene57115:CDS | 45.0% | |
| ACCATGTTGAAGCTGTGGAA+TGG | + | chr6.2:3869700-3869681 | None:intergenic | 45.0% | |
| ACCTTTGCTTGATCTGCCTT+TGG | + | chr6.2:3866665-3866684 | None:intergenic | 45.0% | |
| ACGATCTTATGCGGCTTGAT+TGG | - | chr6.2:3869936-3869955 | MS.gene57115:intron | 45.0% | |
| ACGATCTTATGCGGCTTGAT+TGG | + | chr6.2:3869955-3869936 | None:intergenic | 45.0% | |
| ACTAGTTACCCAACCTCTGA+TGG | - | chr6.2:3868041-3868060 | MS.gene57115:CDS | 45.0% | |
| AGAATCCTCCAGCTTCTTCA+TGG | + | chr6.2:3868498-3868517 | None:intergenic | 45.0% | |
| AGATCGTGCAGAAGCAATGT+TGG | + | chr6.2:3869923-3869942 | None:intergenic | 45.0% | |
| AGATTCCATGAAGAAGCTGG+AGG | - | chr6.2:3868490-3868509 | MS.gene57115:CDS | 45.0% | |
| AGCAAAGGTAGAAAGGAAGG+TGG | - | chr6.2:3866676-3866695 | MS.gene57115:CDS | 45.0% | |
| AGTGGATCCTCAAACCCTTA+GGG | - | chr6.2:3868879-3868898 | MS.gene57115:intron | 45.0% | |
| AGTGGATCCTCAAACCCTTA+GGG | + | chr6.2:3868898-3868879 | None:intergenic | 45.0% | |
| ATACACACACCATCAGAGGT+TGG | + | chr6.2:3868053-3868072 | None:intergenic | 45.0% | |
| ATACGAAGAAGAACTACCCG+AGG | - | chr6.2:3866328-3866347 | MS.gene57115:CDS | 45.0% | |
| ATAGTTGCCCTAAGGGTTTG+AGG | - | chr6.2:3869972-3869991 | MS.gene57115:intron | 45.0% | |
| ATGAAGAAGCTGGAGGATTC+TGG | - | chr6.2:3868497-3868516 | MS.gene57115:CDS | 45.0% | |
| ATTGAAGATGCCTCCTCTGA+AGG | - | chr6.2:3869048-3869067 | MS.gene57115:intron | 45.0% | |
| ATTGAAGATGCCTCCTCTGA+AGG | + | chr6.2:3869067-3869048 | None:intergenic | 45.0% | |
| ATTGCATGTTAAACGGGTCG+AGG | + | chr6.2:3870255-3870274 | None:intergenic | 45.0% | |
| CACGCAGCTTATAACATCAG+TGG | - | chr6.2:3870568-3870587 | MS.gene57115:CDS | 45.0% | |
| CATGATGTTGTGGAAGGTGA+TGG | - | chr6.2:3866524-3866543 | MS.gene57115:CDS | 45.0% | |
| CATTGCAAAGAACACCATCG+AGG | - | chr6.2:3871998-3872017 | MS.gene57115:CDS | 45.0% | |
| CATTTACATCGACAGGGGTA+GGG | + | chr6.2:3866286-3866305 | None:intergenic | 45.0% | |
| CCATGAAACAAGAATGCCTG+AGG | - | chr6.2:3867561-3867580 | MS.gene57115:CDS | 45.0% | |
| CGAAACGAAATGTGACGTGA+AGG | - | chr6.2:3869604-3869623 | MS.gene57115:CDS | 45.0% | |
| CGAAGATTCCATGAAGAAGC+TGG | - | chr6.2:3868487-3868506 | MS.gene57115:CDS | 45.0% | |
| CGACGAACATTAAATGGAGG+AGG | - | chr6.2:3870089-3870108 | MS.gene57115:intron | 45.0% | |
| CGATTACCATGTTGAAGCTG+TGG | + | chr6.2:3869188-3869207 | None:intergenic | 45.0% | |
| CGTCGTGAACGTTTCCAAAA+CGG | + | chr6.2:3869740-3869759 | None:intergenic | 45.0% | |
| CTTCTTAAGTTCACGGCCAT+CGG | - | chr6.2:3869225-3869244 | MS.gene57115:intron | 45.0% | |
| GAATGGTAGAGATATGACCG+CGG | - | chr6.2:3871752-3871771 | MS.gene57115:CDS | 45.0% | |
| GACGACAAGGTACAAATGCT+TGG | - | chr6.2:3866935-3866954 | MS.gene57115:intron | 45.0% | |
| GAGAAAGATCGGATCCATTC+AGG | + | chr6.2:3870135-3870154 | None:intergenic | 45.0% | |
| GATGCGTTATGTGCAGTTTG+TGG | - | chr6.2:3871375-3871394 | MS.gene57115:CDS | 45.0% | |
| GCAAGAAAAGGGCTGAGAAA+TGG | - | chr6.2:3871919-3871938 | MS.gene57115:CDS | 45.0% | |
| GCGTAAAATTGTTGAGGAGG+AGG | - | chr6.2:3870291-3870310 | MS.gene57115:CDS | 45.0% | |
| GGAAGGGAGATTAAATAGGG+AGG | + | chr6.2:3867222-3867241 | None:intergenic | 45.0% | |
| GGGAAGTGATCATCTGTTGA+AGG | - | chr6.2:3868688-3868707 | MS.gene57115:CDS | 45.0% | |
| GGTCGTGAACGTTTCCAAAA+CGG | - | chr6.2:3869124-3869143 | MS.gene57115:intron | 45.0% | |
| GGTTTAGATAAGCAGGACGT+AGG | - | chr6.2:3867733-3867752 | MS.gene57115:intron | 45.0% | |
| GTCCGATGAATCAAGTACCA+TGG | + | chr6.2:3871574-3871593 | None:intergenic | 45.0% | |
| GTGAAGGAAATTATCGCCGA+TGG | + | chr6.2:3869639-3869620 | None:intergenic | 45.0% | |
| GTTACTTCTGGGCTCACATT+CGG | + | chr6.2:3872059-3872078 | None:intergenic | 45.0% | |
| TACACACACCATCAGAGGTT+GGG | + | chr6.2:3868052-3868071 | None:intergenic | 45.0% | |
| TCAAAAGTAGCATCCACCAG+TGG | - | chr6.2:3868533-3868552 | MS.gene57115:CDS | 45.0% | |
| TCAACATGGTAACCGACAAG+AGG | + | chr6.2:3869671-3869690 | None:intergenic | 45.0% | |
| TCAACATGGTAATCGCGAAG+AGG | - | chr6.2:3869193-3869212 | MS.gene57115:intron | 45.0% | |
| TCATTTACATCGACAGGGGT+AGG | + | chr6.2:3866287-3866306 | None:intergenic | 45.0% | |
| TCCAAAGGCAGATCAAGCAA+AGG | - | chr6.2:3866661-3866680 | MS.gene57115:CDS | 45.0% | |
| TCCAAATACTCTTCTGCCAC+TGG | + | chr6.2:3868552-3868571 | None:intergenic | 45.0% | |
| TCCATTCCACAGCTTCAACA+TGG | - | chr6.2:3869179-3869198 | MS.gene57115:intron | 45.0% | |
| TCCATTCCACAGCTTCAACA+TGG | + | chr6.2:3869198-3869179 | None:intergenic | 45.0% | |
| TCTATGTTGTCCGATGCTCA+TGG | + | chr6.2:3868999-3869018 | None:intergenic | 45.0% | |
| TGCTTCTGCACGATCTTATG+CGG | - | chr6.2:3869927-3869946 | MS.gene57115:intron | 45.0% | |
| TGCTTGTGCACGATCTTATG+CGG | + | chr6.2:3868940-3868959 | None:intergenic | 45.0% | |
| TGGAAACGTTCACGACCTAA+GGG | + | chr6.2:3869121-3869140 | None:intergenic | 45.0% | |
| TGGAAACGTTCACGACGTAA+GGG | - | chr6.2:3869743-3869762 | MS.gene57115:CDS | 45.0% | |
| TGGTATCTTGCCTCCAATTG+AGG | - | chr6.2:3870628-3870647 | MS.gene57115:intron | 45.0% | |
| TGTTCATGCACCACTTCCAA+AGG | - | chr6.2:3866646-3866665 | MS.gene57115:CDS | 45.0% | |
| TTCTTTCTGGACTCTTCCTC+GGG | + | chr6.2:3866347-3866366 | None:intergenic | 45.0% | |
| TTGAAGATGCCTCCTCTGAA+GGG | - | chr6.2:3869049-3869068 | MS.gene57115:intron | 45.0% | |
| TTGAAGATGCCTCCTCTGAA+GGG | + | chr6.2:3869068-3869049 | None:intergenic | 45.0% | |
| TTGGAAACGTTCACGACCTA+AGG | + | chr6.2:3869122-3869141 | None:intergenic | 45.0% | |
| TTGGAAACGTTCACGACGTA+AGG | - | chr6.2:3869742-3869761 | MS.gene57115:CDS | 45.0% | |
| TTTCTCAATAGCACTAGCCG+CGG | + | chr6.2:3871772-3871791 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr6.2:3868342-3868361 | None:intergenic | 45.0% |
| ! | ACCTGTTCTGACACCCTTTT+AGG | - | chr6.2:3871495-3871514 | MS.gene57115:CDS | 45.0% |
| ! | ACGTAAGGGGTATGTCAACA+AGG | - | chr6.2:3869757-3869776 | MS.gene57115:CDS | 45.0% |
| ! | AGGGTTTCTTGTTGTGAGAC+TGG | - | chr6.2:3869296-3869315 | MS.gene57115:intron | 45.0% |
| ! | AGGGTTTCTTGTTGTGAGAC+TGG | + | chr6.2:3869315-3869296 | None:intergenic | 45.0% |
| ! | ATGAAGAACTACCGCCGTTT+TGG | - | chr6.2:3869723-3869742 | MS.gene57115:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr6.2:3868343-3868362 | None:intergenic | 45.0% |
| ! | CCTCAGGCATTCTTGTTTCA+TGG | + | chr6.2:3867564-3867583 | None:intergenic | 45.0% |
| ! | CGATAAAGGCAATCTAGGAC+AGG | + | chr6.2:3866237-3866256 | None:intergenic | 45.0% |
| ! | GGGTTTCTTGTTGTGAGACT+GGG | - | chr6.2:3869297-3869316 | MS.gene57115:intron | 45.0% |
| ! | GGGTTTCTTGTTGTGAGACT+GGG | + | chr6.2:3869316-3869297 | None:intergenic | 45.0% |
| !! | AAAGACTCTAGAAGTGCTGG+AGG | - | chr6.2:3867924-3867943 | MS.gene57115:intron | 45.0% |
| !! | ACCAGTGGCAGAAGAGTATT+TGG | - | chr6.2:3868548-3868567 | MS.gene57115:CDS | 45.0% |
| !! | ATGAGCATCGGACAACATAG+AGG | - | chr6.2:3868998-3869017 | MS.gene57115:intron | 45.0% |
| !! | CGCAGAACAAAGGTTGATGT+TGG | - | chr6.2:3870608-3870627 | MS.gene57115:intron | 45.0% |
| !! | CGCTGATTCTGATCTGGATA+AGG | - | chr6.2:3867873-3867892 | MS.gene57115:intron | 45.0% |
| !! | GAATACCGCTGATTCTGATC+TGG | - | chr6.2:3867867-3867886 | MS.gene57115:intron | 45.0% |
| !! | GACTTTGAGGCCAAGAAAAG+TGG | - | chr6.2:3868650-3868669 | MS.gene57115:CDS | 45.0% |
| !! | TCCTAAAAGGGTGTCAGAAC+AGG | + | chr6.2:3871499-3871518 | None:intergenic | 45.0% |
| !! | TCTTGATTTGGACGACGACA+AGG | - | chr6.2:3866922-3866941 | MS.gene57115:CDS | 45.0% |
| AAGAAGCTGGAGGATTCTGG+TGG | - | chr6.2:3868500-3868519 | MS.gene57115:CDS | 50.0% | |
| ACAATCTCTCCACCAGTTGC+AGG | - | chr6.2:3870156-3870175 | MS.gene57115:intron | 50.0% | |
| ACATATATACCTCCGCCCTC+AGG | + | chr6.2:3867580-3867599 | None:intergenic | 50.0% | |
| ACCTCGTTGACATACCCCTT+AGG | - | chr6.2:3869103-3869122 | MS.gene57115:intron | 50.0% | |
| AGTTGCAGGCTGATATGCGA+TGG | - | chr6.2:3870170-3870189 | MS.gene57115:intron | 50.0% | |
| ATCACTGCTGCTACTGTCCA+TGG | + | chr6.2:3867821-3867840 | None:intergenic | 50.0% | |
| ATCGCATATCAGCCTGCAAC+TGG | + | chr6.2:3870171-3870190 | None:intergenic | 50.0% | |
| ATGGAAGACTCAGCCTTACG+AGG | + | chr6.2:3871555-3871574 | None:intergenic | 50.0% | |
| CAACGCATTCAGGTCGACAT+CGG | - | chr6.2:3868730-3868749 | MS.gene57115:intron | 50.0% | |
| CAGTGGATCCTCAAACCCTT+AGG | - | chr6.2:3868878-3868897 | MS.gene57115:intron | 50.0% | |
| CAGTGGATCCTCAAACCCTT+AGG | + | chr6.2:3868897-3868878 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr6.2:3868341-3868360 | MS.gene57115:CDS | 50.0% | |
| CCCAGAAGTAACGTGTTGTG+CGG | - | chr6.2:3872067-3872086 | MS.gene57115:CDS | 50.0% | |
| CCGCACAACACGTTACTTCT+GGG | + | chr6.2:3872070-3872089 | None:intergenic | 50.0% | |
| CGGTTACCATGTTGAAGCTG+TGG | - | chr6.2:3869676-3869695 | MS.gene57115:CDS | 50.0% | |
| CGTGAACGTTTCCAAAACGG+CGG | - | chr6.2:3869127-3869146 | MS.gene57115:intron | 50.0% | |
| CGTGAACGTTTCCAAAACGG+CGG | + | chr6.2:3869146-3869127 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr6.2:3868338-3868357 | None:intergenic | 50.0% | |
| CTTCTCAAGTACACGGCGAT+CGG | + | chr6.2:3869639-3869658 | None:intergenic | 50.0% | |
| GAAACAAGAATGCCTGAGGG+CGG | - | chr6.2:3867565-3867584 | MS.gene57115:CDS | 50.0% | |
| GACATTTGGAAACGCGTGCA+AGG | + | chr6.2:3871473-3871492 | None:intergenic | 50.0% | |
| GAGAAGAAGCGAAAGGAGAG+AGG | - | chr6.2:3866143-3866162 | MS.gene57115:CDS | 50.0% | |
| GGAAACGTTCACGACCTAAG+GGG | + | chr6.2:3869120-3869139 | None:intergenic | 50.0% | |
| GGAAACGTTCACGACGTAAG+GGG | - | chr6.2:3869744-3869763 | MS.gene57115:CDS | 50.0% | |
| GGATCCATTCAGGTCGACAT+CGG | + | chr6.2:3870125-3870144 | None:intergenic | 50.0% | |
| GGGTATGTCAACGAGGTTAG+CGG | + | chr6.2:3869100-3869119 | None:intergenic | 50.0% | |
| GTAGTTGCCCTAAGGGTTTG+AGG | + | chr6.2:3868889-3868908 | None:intergenic | 50.0% | |
| GTTGCAGGCTGATATGCGAT+GGG | - | chr6.2:3870171-3870190 | MS.gene57115:intron | 50.0% | |
| TCCGCACAACACGTTACTTC+TGG | + | chr6.2:3872071-3872090 | None:intergenic | 50.0% | |
| TCGTAAGGCTGAGTCTTCCA+TGG | - | chr6.2:3871554-3871573 | MS.gene57115:CDS | 50.0% | |
| TGCTGTACAACCTCCTCGTA+AGG | - | chr6.2:3871539-3871558 | MS.gene57115:CDS | 50.0% | |
| TGTAGGTAAGGGAGGAGTTG+TGG | + | chr6.2:3870767-3870786 | None:intergenic | 50.0% | |
| TGTCAAATGCATCCACCGGA+CGG | - | chr6.2:3871944-3871963 | MS.gene57115:CDS | 50.0% | |
| TGTGGTTGAGAAGCTCTACC+CGG | - | chr6.2:3871128-3871147 | MS.gene57115:intron | 50.0% | |
| TGTTGTGAGACTGGGACTTG+AGG | - | chr6.2:3869305-3869324 | MS.gene57115:intron | 50.0% | |
| TGTTGTGAGACTGGGACTTG+AGG | + | chr6.2:3869324-3869305 | None:intergenic | 50.0% | |
| TTTGCCGATGTCGACCTGAA+TGG | - | chr6.2:3870118-3870137 | MS.gene57115:intron | 50.0% | |
| ! | ACCTAAGGGGTATGTCAACG+AGG | + | chr6.2:3869107-3869126 | None:intergenic | 50.0% |
| ! | ATGAAGGACTACCGCCGTTT+TGG | + | chr6.2:3869141-3869160 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr6.2:3868344-3868363 | None:intergenic | 50.0% |
| ! | GCTTGATCTGCCTTTGGAAG+TGG | + | chr6.2:3866659-3866678 | None:intergenic | 50.0% |
| ! | TGAAGATGCCTCCTCTGAAG+GGG | - | chr6.2:3869050-3869069 | MS.gene57115:intron | 50.0% |
| ! | TGAAGATGCCTCCTCTGAAG+GGG | + | chr6.2:3869069-3869050 | None:intergenic | 50.0% |
| ! | TTGCAATAACAGTGGTGGCG+AGG | - | chr6.2:3868625-3868644 | MS.gene57115:CDS | 50.0% |
| ! | TTTCTGGCGAGGAACTGGTT+AGG | - | chr6.2:3870672-3870691 | MS.gene57115:intron | 50.0% |
| !! | CTAGAAGTGCTGGAGGAAGA+TGG | - | chr6.2:3867931-3867950 | MS.gene57115:intron | 50.0% |
| !!! | TTTTCCGCTGTGTCGGTTGT+TGG | + | chr6.2:3866174-3866193 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr6.2:3868330-3868349 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr6.2:3868329-3868348 | MS.gene57115:CDS | 55.0% | |
| ATTCTCAACCACTCCCCTGC+AGG | - | chr6.2:3870812-3870831 | MS.gene57115:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr6.2:3868336-3868355 | MS.gene57115:CDS | 55.0% | |
| GAAGACTCAGCCTTACGAGG+AGG | + | chr6.2:3871552-3871571 | None:intergenic | 55.0% | |
| GCATATCAGCCTGCAACTGG+TGG | + | chr6.2:3870168-3870187 | None:intergenic | 55.0% | |
| GGAGAGACTGTAGGTAAGGG+AGG | + | chr6.2:3870775-3870794 | None:intergenic | 55.0% | |
| GGCTCTGCAATTTAGCAGCC+CGG | + | chr6.2:3867406-3867425 | None:intergenic | 55.0% | |
| GGGCTGTCAAATGCATCCAC+CGG | - | chr6.2:3871940-3871959 | MS.gene57115:CDS | 55.0% | |
| GTCAAATGCATCCACCGGAC+GGG | - | chr6.2:3871945-3871964 | MS.gene57115:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr6.2:3868330-3868349 | MS.gene57115:CDS | 55.0% | |
| TTGTATAGCCTGCAGGGGAG+TGG | + | chr6.2:3870823-3870842 | None:intergenic | 55.0% | |
| ! | TCAGCTTTCTGGCGAGGAAC+TGG | - | chr6.2:3870667-3870686 | MS.gene57115:intron | 55.0% |
| ! | TGGTGGCGAGGATGACTTTG+AGG | - | chr6.2:3868637-3868656 | MS.gene57115:CDS | 55.0% |
| ACAAGAATGCCTGAGGGCGG+AGG | - | chr6.2:3867568-3867587 | MS.gene57115:CDS | 60.0% | |
| AGGAGTTGTGGTCCTGACGC+CGG | + | chr6.2:3870755-3870774 | None:intergenic | 60.0% | |
| CATCCACCGGACGGGACAAA+AGG | - | chr6.2:3871953-3871972 | MS.gene57115:CDS | 60.0% | |
| CTCGAGAACAAACCGGCGTC+AGG | - | chr6.2:3870740-3870759 | MS.gene57115:CDS | 60.0% | |
| GAACGACCTAGCCCCTTCAG+AGG | - | chr6.2:3869800-3869819 | MS.gene57115:CDS | 60.0% | |
| GACGCCAACAACCGACACAG+CGG | - | chr6.2:3866167-3866186 | MS.gene57115:CDS | 60.0% | |
| GGTTGAGAAGCTCTACCCGG+TGG | - | chr6.2:3871131-3871150 | MS.gene57115:intron | 60.0% | |
| ! | ATGCCTCCTCTGAAGGGGCT+AGG | + | chr6.2:3869809-3869828 | None:intergenic | 60.0% |
| ! | CGGGTTCCTTTTGTCCCGTC+CGG | + | chr6.2:3871962-3871981 | None:intergenic | 60.0% |
| ! | GTTCCTTTTGTCCCGTCCGG+TGG | + | chr6.2:3871959-3871978 | None:intergenic | 60.0% |
| CGACCTAGCCCCTTCAGAGG+AGG | - | chr6.2:3869803-3869822 | MS.gene57115:CDS | 65.0% | |
| GAACGACCTCGCCCCTTCAG+AGG | + | chr6.2:3869064-3869083 | None:intergenic | 65.0% | |
| ! | ATGCCTCCTCTGAAGGGGCG+AGG | - | chr6.2:3869055-3869074 | MS.gene57115:intron | 65.0% |
| CGACCTCGCCCCTTCAGAGG+AGG | + | chr6.2:3869061-3869080 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 3866137 | 3872133 | 3866137 | ID=MS.gene57115 |
| chr6.2 | mRNA | 3866137 | 3872133 | 3866137 | ID=MS.gene57115.t1;Parent=MS.gene57115 |
| chr6.2 | exon | 3871327 | 3872133 | 3871327 | ID=MS.gene57115.t1.exon1;Parent=MS.gene57115.t1 |
| chr6.2 | CDS | 3871327 | 3872133 | 3871327 | ID=cds.MS.gene57115.t1;Parent=MS.gene57115.t1 |
| chr6.2 | exon | 3870681 | 3870899 | 3870681 | ID=MS.gene57115.t1.exon2;Parent=MS.gene57115.t1 |
| chr6.2 | CDS | 3870681 | 3870899 | 3870681 | ID=cds.MS.gene57115.t1;Parent=MS.gene57115.t1 |
| chr6.2 | exon | 3870277 | 3870597 | 3870277 | ID=MS.gene57115.t1.exon3;Parent=MS.gene57115.t1 |
| chr6.2 | CDS | 3870277 | 3870597 | 3870277 | ID=cds.MS.gene57115.t1;Parent=MS.gene57115.t1 |
| chr6.2 | exon | 3869529 | 3869848 | 3869529 | ID=MS.gene57115.t1.exon4;Parent=MS.gene57115.t1 |
| chr6.2 | CDS | 3869529 | 3869848 | 3869529 | ID=cds.MS.gene57115.t1;Parent=MS.gene57115.t1 |
| chr6.2 | exon | 3867952 | 3868717 | 3867952 | ID=MS.gene57115.t1.exon5;Parent=MS.gene57115.t1 |
| chr6.2 | CDS | 3867952 | 3868717 | 3867952 | ID=cds.MS.gene57115.t1;Parent=MS.gene57115.t1 |
| chr6.2 | exon | 3867401 | 3867695 | 3867401 | ID=MS.gene57115.t1.exon6;Parent=MS.gene57115.t1 |
| chr6.2 | CDS | 3867401 | 3867695 | 3867401 | ID=cds.MS.gene57115.t1;Parent=MS.gene57115.t1 |
| chr6.2 | exon | 3866137 | 3866951 | 3866137 | ID=MS.gene57115.t1.exon7;Parent=MS.gene57115.t1 |
| chr6.2 | CDS | 3866137 | 3866951 | 3866137 | ID=cds.MS.gene57115.t1;Parent=MS.gene57115.t1 |
| Gene Sequence |
| Protein sequence |