AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene57383

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57383.t1 MTR_8g093580 94.161 411 23 1 1 411 80 489 0.0 784
MS.gene57383.t1 MTR_8g063550 68.966 406 78 7 1 405 80 438 0.0 525
MS.gene57383.t1 MTR_8g063550 76.667 300 64 4 1 299 80 374 1.16e-157 451
MS.gene57383.t1 MTR_8g063550 81.600 250 44 2 1 250 80 327 6.98e-144 413
MS.gene57383.t1 MTR_3g096140 59.355 155 58 2 1 150 81 235 1.34e-60 198
MS.gene57383.t1 MTR_3g096140 59.355 155 58 2 1 150 60 214 9.86e-60 197
MS.gene57383.t1 MTR_3g096140 59.355 155 58 2 1 150 81 235 1.74e-59 197
MS.gene57383.t1 MTR_1g090723 55.789 95 42 0 3 97 85 179 1.62e-36 141
MS.gene57383.t1 MTR_1g090723 57.895 95 39 1 3 97 85 178 5.04e-36 139
MS.gene57383.t1 MTR_1g090723 57.895 95 39 1 3 97 85 178 7.03e-36 139
MS.gene57383.t1 MTR_1g097300 56.000 100 44 0 3 102 95 194 6.46e-34 133
MS.gene57383.t1 MTR_0036s0150 52.577 97 45 1 3 99 82 177 2.33e-33 131
MS.gene57383.t1 MTR_6g477900 54.545 77 35 0 3 79 82 158 1.82e-25 103
MS.gene57383.t1 MTR_1g090720 48.246 114 52 2 1 108 116 228 7.51e-25 106
MS.gene57383.t1 MTR_2g062730 47.368 95 43 3 3 96 87 175 3.91e-23 99.8
MS.gene57383.t1 MTR_5g076850 46.591 88 46 1 3 89 82 169 7.36e-22 98.2
MS.gene57383.t1 MTR_4g108760 46.988 83 42 1 3 83 91 173 1.45e-21 95.5
MS.gene57383.t1 MTR_7g011130 39.423 104 47 2 3 90 93 196 1.55e-21 95.5
MS.gene57383.t1 MTR_3g070040 41.489 94 48 3 3 90 79 171 1.94e-21 94.7
MS.gene57383.t1 MTR_3g064580 46.591 88 45 2 3 88 82 169 2.51e-21 96.7
MS.gene57383.t1 MTR_6g084430 50.667 75 35 1 3 77 79 151 3.03e-21 94.0
MS.gene57383.t1 MTR_4g101680 43.220 118 58 5 3 117 84 195 4.38e-21 94.4
MS.gene57383.t1 MTR_3g435150 45.783 83 43 1 3 83 90 172 6.30e-21 92.8
MS.gene57383.t1 MTR_2g064090 52.632 76 35 1 3 77 82 157 1.39e-20 92.4
MS.gene57383.t1 MTR_4g035590 48.684 76 36 1 3 78 85 157 1.77e-20 92.4
MS.gene57383.t1 MTR_7g011120 39.796 98 49 2 3 90 82 179 1.82e-20 91.7
MS.gene57383.t1 MTR_8g024480 42.353 85 40 1 3 78 92 176 2.00e-20 93.2
MS.gene57383.t1 MTR_3g109340 45.783 83 42 2 3 83 96 177 2.80e-20 92.0
MS.gene57383.t1 MTR_3g109340 44.578 83 42 2 3 83 96 176 6.71e-20 90.9
MS.gene57383.t1 MTR_3g093050 48.052 77 40 0 1 77 96 172 8.12e-20 92.0
MS.gene57383.t1 MTR_1g096430 46.512 86 42 2 3 87 84 166 8.67e-20 90.1
MS.gene57383.t1 MTR_6g012670 40.000 95 51 2 3 93 94 186 9.89e-20 89.7
MS.gene57383.t1 MTR_3g093050 48.052 77 40 0 1 77 96 172 9.99e-20 91.7
MS.gene57383.t1 MTR_5g069030 46.154 78 42 0 1 78 99 176 1.04e-19 91.7
MS.gene57383.t1 MTR_8g076110 48.684 76 37 1 3 78 83 156 3.11e-19 88.2
MS.gene57383.t1 MTR_2g078700 48.810 84 37 3 3 81 97 179 4.22e-19 88.6
MS.gene57383.t1 MTR_4g036030 39.623 106 51 4 3 104 84 180 1.00e-18 87.0
MS.gene57383.t1 MTR_5g012080 48.101 79 35 3 3 78 84 159 1.54e-18 86.7
MS.gene57383.t1 MTR_7g005280 42.529 87 46 2 3 87 86 170 2.10e-18 84.7
MS.gene57383.t1 MTR_2g064470 47.368 76 39 1 3 77 83 158 2.63e-18 85.5
MS.gene57383.t1 MTR_3g070030 39.362 94 49 3 3 90 93 184 2.71e-18 85.9
MS.gene57383.t1 MTR_6g032770 48.750 80 35 3 3 77 92 170 3.98e-18 85.9
MS.gene57383.t1 MTR_5g021710 46.053 76 39 1 3 78 85 158 7.57e-18 84.7
MS.gene57383.t1 MTR_3g093040 45.570 79 39 2 1 77 182 258 7.72e-18 84.0
MS.gene57383.t1 MTR_1g008740 45.455 77 39 2 3 77 88 163 9.66e-18 84.3
MS.gene57383.t1 MTR_1g008740 45.455 77 39 2 3 77 102 177 1.30e-17 84.0
MS.gene57383.t1 MTR_2g079990 35.789 95 58 1 3 94 90 184 2.01e-17 83.6
MS.gene57383.t1 MTR_7g085260 45.783 83 35 3 3 77 91 171 2.39e-17 83.6
MS.gene57383.t1 MTR_4g081870 39.759 83 46 2 3 81 83 165 7.08e-17 80.5
MS.gene57383.t1 MTR_2g086880 43.836 73 34 1 2 74 92 157 1.23e-16 82.0
MS.gene57383.t1 MTR_2g086880 43.836 73 34 1 2 74 92 157 1.41e-16 82.0
MS.gene57383.t1 MTR_3g088110 42.500 80 42 2 3 79 81 159 3.23e-16 79.0
MS.gene57383.t1 MTR_4g098630 40.476 84 47 1 3 83 82 165 4.90e-16 79.0
MS.gene57383.t1 MTR_8g099750 38.542 96 48 3 1 89 84 175 7.70e-16 76.6
MS.gene57383.t1 MTR_5g041940 40.000 80 44 2 3 78 77 156 1.36e-15 76.6
MS.gene57383.t1 MTR_2157s0010 36.957 92 46 2 3 82 82 173 1.85e-15 76.3
MS.gene57383.t1 MTR_1g069805 45.455 77 36 2 3 77 84 156 1.87e-15 76.6
MS.gene57383.t1 MTR_4g075980 47.436 78 33 2 3 77 89 161 1.87e-15 77.0
MS.gene57383.t1 MTR_7g100990 37.363 91 50 3 3 87 85 174 1.98e-15 77.0
MS.gene57383.t1 MTR_8g094580 38.272 81 45 2 3 79 27 106 2.07e-15 75.5
MS.gene57383.t1 MTR_2g080010 38.596 114 52 5 3 103 89 197 2.38e-15 77.4
MS.gene57383.t1 MTR_4g134460 41.250 80 40 3 3 79 128 203 2.57e-15 77.8
MS.gene57383.t1 MTR_8g467490 39.535 86 41 3 3 77 88 173 3.00e-15 77.4
MS.gene57383.t1 MTR_8g059170 39.241 79 42 2 3 77 88 164 3.63e-15 76.3
MS.gene57383.t1 MTR_8g094580 38.272 81 45 2 3 79 81 160 4.27e-15 75.5
MS.gene57383.t1 MTR_7g085220 36.364 88 43 2 3 77 82 169 8.87e-15 75.5
MS.gene57383.t1 MTR_3g116070 40.506 79 45 1 3 79 98 176 1.10e-14 75.1
MS.gene57383.t1 MTR_5g014300 37.500 104 55 2 3 99 82 182 1.16e-14 75.1
MS.gene57383.t1 MTR_7g097090 44.737 76 36 2 3 76 84 155 1.33e-14 74.3
MS.gene57383.t1 MTR_6g011860 40.000 85 41 3 3 77 89 173 1.81e-14 75.1
MS.gene57383.t1 MTR_3g096920 38.750 80 45 2 3 79 81 159 4.37e-14 72.8
MS.gene57383.t1 MTR_7g070140 52.727 55 24 1 2 54 37 91 4.85e-14 69.3
MS.gene57383.t1 MTR_5g040420 29.936 157 76 6 3 148 88 221 1.49e-13 72.0
MS.gene57383.t1 MTR_2g068880 36.667 90 42 2 3 77 97 186 4.18e-13 70.1
MS.gene57383.t1 MTR_3g098810 38.947 95 48 2 1 85 84 178 5.01e-13 68.9
MS.gene57383.t1 MTR_2g079990 44.262 61 34 0 3 63 90 150 5.57e-13 70.5
MS.gene57383.t1 MTR_1g097300 53.704 54 25 0 49 102 1 54 6.01e-13 70.5
MS.gene57383.t1 MTR_2g093810 39.506 81 43 3 3 77 88 168 2.62e-12 67.8
MS.gene57383.t1 MTR_4g089135 51.852 54 24 1 3 54 89 142 7.52e-12 66.6
MS.gene57383.t1 MTR_7g070150 43.860 57 29 1 21 77 4 57 9.11e-12 61.6
MS.gene57383.t1 MTR_8g023900 40.506 79 39 4 1 77 268 340 2.30e-11 65.9
MS.gene57383.t1 MTR_7g105170 32.927 82 49 2 2 77 83 164 2.50e-11 63.9
MS.gene57383.t1 MTR_2g068920 50.000 56 24 1 3 54 96 151 2.71e-11 64.3
MS.gene57383.t1 MTR_3g098810 51.724 58 24 1 1 54 84 141 4.18e-11 62.0
MS.gene57383.t1 MTR_2g086690 35.802 81 48 3 3 79 84 164 4.51e-11 63.2
MS.gene57383.t1 MTR_5g090970 33.333 87 46 3 3 77 91 177 4.82e-11 63.9
MS.gene57383.t1 MTR_5g090970 33.333 87 46 3 3 77 92 178 4.85e-11 63.9
MS.gene57383.t1 MTR_3g096920 46.429 56 29 1 3 58 81 135 9.97e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57383.t1 AT5G09330 51.899 158 70 2 3 156 82 237 7.83e-45 162
MS.gene57383.t1 AT5G09330 51.899 158 70 2 3 156 82 237 7.83e-45 162
MS.gene57383.t1 AT5G09330 51.899 158 70 2 3 156 82 237 7.83e-45 162
MS.gene57383.t1 AT5G09330 51.899 158 70 2 3 156 82 237 7.83e-45 162
MS.gene57383.t1 AT5G09330 51.899 158 70 2 3 156 82 237 7.83e-45 162
MS.gene57383.t1 AT5G64060 49.660 147 72 1 3 149 82 226 7.25e-42 151
MS.gene57383.t1 AT5G04410 41.104 163 91 1 3 160 85 247 7.73e-39 147
MS.gene57383.t1 AT3G10500 58.889 90 37 0 3 92 85 174 2.61e-35 137
MS.gene57383.t1 AT3G10490 48.739 119 51 3 1 118 101 210 3.41e-32 122
MS.gene57383.t1 AT3G10490 48.739 119 51 3 1 118 1 110 8.69e-32 124
MS.gene57383.t1 AT3G10490 48.739 119 51 3 1 118 1 110 8.69e-32 124
MS.gene57383.t1 AT1G34190 51.515 99 48 0 3 101 92 190 1.15e-31 127
MS.gene57383.t1 AT1G34180 45.872 109 53 1 3 105 92 200 2.22e-31 124
MS.gene57383.t1 AT1G34180 45.872 109 53 1 3 105 104 212 2.65e-31 124
MS.gene57383.t1 AT3G10490 48.739 119 51 3 1 118 101 210 5.56e-31 123
MS.gene57383.t1 AT1G34180 45.872 109 53 1 3 105 92 200 6.10e-31 124
MS.gene57383.t1 AT1G34180 45.872 109 53 1 3 105 104 212 6.21e-31 125
MS.gene57383.t1 AT3G10480 45.238 126 59 3 1 125 101 217 4.37e-30 121
MS.gene57383.t1 AT3G10480 44.800 125 60 2 1 125 101 216 4.96e-30 120
MS.gene57383.t1 AT3G10480 37.427 171 86 4 1 159 134 295 5.80e-30 121
MS.gene57383.t1 AT1G32870 53.261 92 41 1 3 92 84 175 1.21e-27 115
MS.gene57383.t1 AT1G32870 53.261 92 41 1 3 92 84 175 1.25e-27 115
MS.gene57383.t1 AT1G32870 53.261 92 41 1 3 92 120 211 1.85e-27 114
MS.gene57383.t1 AT3G17730 55.844 77 34 0 3 79 82 158 1.66e-25 104
MS.gene57383.t1 AT3G12977 51.852 81 38 1 3 82 39 119 2.34e-24 100
MS.gene57383.t1 AT1G33060 53.333 75 35 0 3 77 100 174 9.53e-24 103
MS.gene57383.t1 AT1G33060 53.333 75 35 0 3 77 100 174 1.01e-23 103
MS.gene57383.t1 AT1G65910 53.333 75 35 0 3 77 82 156 1.67e-23 103
MS.gene57383.t1 AT3G12977 52.500 80 37 1 3 81 92 171 1.76e-23 99.8
MS.gene57383.t1 AT5G61430 49.398 83 40 1 3 83 27 109 7.31e-23 97.8
MS.gene57383.t1 AT4G10350 50.000 76 38 0 3 78 39 114 1.33e-22 97.4
MS.gene57383.t1 AT1G71930 34.815 135 75 3 3 133 86 211 1.95e-22 97.4
MS.gene57383.t1 AT1G71930 34.815 135 75 3 3 133 86 211 1.95e-22 97.4
MS.gene57383.t1 AT5G61430 49.398 83 40 1 3 83 90 172 2.54e-22 97.4
MS.gene57383.t1 AT4G10350 50.000 76 38 0 3 78 86 161 3.24e-22 97.1
MS.gene57383.t1 AT5G39610 48.193 83 41 1 3 83 94 176 2.14e-21 94.0
MS.gene57383.t1 AT1G79580 48.052 77 36 2 3 78 94 167 1.61e-20 92.8
MS.gene57383.t1 AT1G79580 48.052 77 36 2 3 78 94 167 1.61e-20 92.8
MS.gene57383.t1 AT1G79580 48.052 77 36 2 3 78 94 167 1.61e-20 92.8
MS.gene57383.t1 AT1G79580 48.052 77 36 2 3 78 94 167 1.61e-20 92.8
MS.gene57383.t1 AT1G79580 48.052 77 36 2 3 78 94 167 1.61e-20 92.8
MS.gene57383.t1 AT1G33280 47.368 76 37 1 3 78 85 157 1.64e-20 91.7
MS.gene57383.t1 AT1G56010 34.783 184 91 6 3 174 27 193 1.89e-20 90.5
MS.gene57383.t1 AT5G07680 45.783 83 43 1 3 83 77 159 2.28e-20 91.7
MS.gene57383.t1 AT4G35580 49.333 75 38 0 3 77 85 159 2.52e-20 93.2
MS.gene57383.t1 AT4G35580 49.333 75 38 0 3 77 85 159 2.53e-20 93.6
MS.gene57383.t1 AT4G35580 49.333 75 38 0 3 77 85 159 2.63e-20 93.6
MS.gene57383.t1 AT1G12260 40.187 107 58 3 3 108 84 185 2.64e-20 92.4
MS.gene57383.t1 AT1G56010 34.783 184 91 6 3 174 94 260 2.91e-20 91.3
MS.gene57383.t1 AT5G07680 45.783 83 43 1 3 83 91 173 3.02e-20 91.3
MS.gene57383.t1 AT1G12260 40.187 107 58 3 3 108 84 185 3.10e-20 91.7
MS.gene57383.t1 AT3G49530 37.879 132 65 4 3 131 89 206 4.03e-20 92.0
MS.gene57383.t1 AT1G76420 51.899 79 35 2 3 79 96 173 4.54e-20 90.9
MS.gene57383.t1 AT3G49530 37.879 132 65 4 3 131 89 206 4.59e-20 92.4
MS.gene57383.t1 AT1G62700 39.450 109 58 4 3 108 84 187 4.83e-20 91.7
MS.gene57383.t1 AT1G62700 39.450 109 58 4 3 108 84 187 4.83e-20 91.7
MS.gene57383.t1 AT5G24590 46.835 79 41 1 1 78 87 165 6.40e-20 91.7
MS.gene57383.t1 AT2G27300 47.945 73 31 1 2 74 88 153 6.56e-20 90.5
MS.gene57383.t1 AT3G18400 43.210 81 45 1 3 83 79 158 8.82e-20 89.7
MS.gene57383.t1 AT2G18060 46.835 79 40 1 3 81 86 162 3.31e-19 89.0
MS.gene57383.t1 AT2G18060 46.835 79 40 1 3 81 86 162 3.31e-19 89.0
MS.gene57383.t1 AT4G36160 43.750 96 45 2 3 98 91 177 3.77e-19 89.0
MS.gene57383.t1 AT4G36160 43.750 96 45 2 3 98 87 173 3.78e-19 89.0
MS.gene57383.t1 AT4G36160 43.750 96 45 2 3 98 87 173 3.78e-19 89.0
MS.gene57383.t1 AT2G24430 48.052 77 37 2 3 77 90 165 4.91e-19 87.8
MS.gene57383.t1 AT2G24430 48.052 77 37 2 3 77 90 165 4.91e-19 87.8
MS.gene57383.t1 AT2G46770 40.449 89 40 2 3 78 93 181 5.27e-19 88.2
MS.gene57383.t1 AT5G13180 48.810 84 40 2 3 84 85 167 5.43e-19 86.3
MS.gene57383.t1 AT5G18270 48.193 83 36 3 3 80 95 175 5.78e-19 87.8
MS.gene57383.t1 AT5G18270 48.193 83 36 3 3 80 95 175 6.36e-19 87.8
MS.gene57383.t1 AT5G17260 47.368 76 39 1 3 77 82 157 8.96e-19 88.6
MS.gene57383.t1 AT3G29035 42.857 91 50 1 3 91 98 188 1.05e-18 86.7
MS.gene57383.t1 AT3G03200 47.368 76 39 1 3 77 82 157 1.15e-18 88.2
MS.gene57383.t1 AT3G04060 46.914 81 40 2 3 80 94 174 1.42e-18 86.7
MS.gene57383.t1 AT1G69490 36.937 111 64 2 3 109 83 191 1.53e-18 85.5
MS.gene57383.t1 AT2G18060 41.758 91 43 2 8 98 3 83 2.64e-18 84.7
MS.gene57383.t1 AT5G22290 44.595 74 33 2 2 74 95 161 5.30e-18 85.1
MS.gene57383.t1 AT3G61910 40.909 88 39 1 3 77 88 175 5.42e-18 84.7
MS.gene57383.t1 AT5G62380 46.053 76 39 1 3 78 84 157 6.44e-18 84.7
MS.gene57383.t1 AT5G62380 46.053 76 39 1 3 78 84 157 6.44e-18 84.7
MS.gene57383.t1 AT5G53950 50.000 80 34 3 3 77 91 169 6.80e-18 85.1
MS.gene57383.t1 AT3G44290 43.836 73 34 1 2 74 88 153 8.22e-18 82.4
MS.gene57383.t1 AT3G15170 45.349 86 41 3 3 83 94 178 2.00e-17 82.8
MS.gene57383.t1 AT3G44290 43.836 73 34 1 2 74 88 153 3.08e-17 82.8
MS.gene57383.t1 AT1G54330 46.341 82 41 1 3 84 82 160 3.23e-17 82.0
MS.gene57383.t1 AT1G52890 36.170 94 56 1 3 92 88 181 6.77e-17 81.6
MS.gene57383.t1 AT2G33480 46.053 76 41 0 3 78 29 104 1.17e-16 78.6
MS.gene57383.t1 AT2G33480 46.053 76 39 1 3 78 86 159 1.20e-16 79.7
MS.gene57383.t1 AT5G66300 33.566 143 90 4 3 143 89 228 1.27e-16 80.1
MS.gene57383.t1 AT1G32770 38.372 86 43 1 3 78 93 178 1.72e-16 80.9
MS.gene57383.t1 AT3G15500 38.158 76 47 0 3 78 88 163 1.82e-16 80.1
MS.gene57383.t1 AT4G27410 38.667 75 46 0 3 77 88 162 2.65e-16 79.3
MS.gene57383.t1 AT2G33480 46.053 76 41 0 3 78 86 161 2.76e-16 79.0
MS.gene57383.t1 AT1G01720 36.036 111 62 3 3 105 81 190 2.98e-16 79.3
MS.gene57383.t1 AT4G27410 38.667 75 46 0 3 77 105 179 3.07e-16 79.3
MS.gene57383.t1 AT5G22290 42.254 71 33 2 7 76 1 64 3.39e-16 78.2
MS.gene57383.t1 AT5G46590 42.857 77 42 2 3 77 82 158 6.65e-16 78.2
MS.gene57383.t1 AT1G77450 41.250 80 43 2 3 79 84 162 1.13e-15 76.6
MS.gene57383.t1 AT4G28530 46.753 77 35 2 3 77 100 172 1.61e-15 77.8
MS.gene57383.t1 AT5G08790 39.024 82 44 2 3 79 81 161 1.78e-15 76.6
MS.gene57383.t1 AT4G17980 43.038 79 41 2 3 77 82 160 3.04e-15 75.9
MS.gene57383.t1 AT4G17980 43.038 79 41 2 3 77 82 160 3.74e-15 75.9
MS.gene57383.t1 AT5G63790 39.024 82 44 2 3 79 134 214 4.14e-15 76.3
MS.gene57383.t1 AT5G63790 39.024 82 44 2 3 79 124 204 4.40e-15 75.9
MS.gene57383.t1 AT3G15510 42.045 88 38 4 3 77 91 178 1.54e-14 75.1
MS.gene57383.t1 AT1G32510 38.824 85 44 2 1 77 80 164 2.01e-14 73.6
MS.gene57383.t1 AT1G61110 38.636 88 41 2 3 77 90 177 2.03e-14 74.3
MS.gene57383.t1 AT5G46590 49.153 59 29 1 3 60 82 140 3.11e-14 73.2
MS.gene57383.t1 AT2G02450 39.744 78 44 2 3 79 125 200 4.98e-14 73.6
MS.gene57383.t1 AT2G02450 39.744 78 44 2 3 79 125 200 6.98e-14 73.2
MS.gene57383.t1 AT2G43000 39.474 76 45 1 3 77 14 89 1.07e-13 70.1
MS.gene57383.t1 AT2G17040 41.026 78 38 2 3 77 80 152 1.44e-13 70.9
MS.gene57383.t1 AT3G04070 38.636 88 40 3 3 77 84 170 1.75e-13 71.6
MS.gene57383.t1 AT4G01540 45.000 80 36 2 1 77 80 154 1.96e-13 72.0
MS.gene57383.t1 AT4G01540 45.000 80 36 2 1 77 80 154 2.16e-13 71.6
MS.gene57383.t1 AT1G26870 38.372 86 42 3 3 77 90 175 2.16e-13 72.0
MS.gene57383.t1 AT4G01520 43.750 80 37 2 1 77 80 154 3.03e-13 70.5
MS.gene57383.t1 AT4G01540 45.000 80 36 2 1 77 80 154 3.27e-13 71.6
MS.gene57383.t1 AT4G01540 45.000 80 36 2 1 77 80 154 3.42e-13 71.2
MS.gene57383.t1 AT2G43000 39.474 76 45 1 3 77 92 167 5.75e-13 69.3
MS.gene57383.t1 AT5G04395 50.820 61 27 1 1 58 113 173 6.65e-13 67.4
MS.gene57383.t1 AT3G04070 30.097 103 44 2 3 77 84 186 5.54e-12 67.0
MS.gene57383.t1 AT4G01550 40.964 83 33 3 2 77 80 153 9.51e-12 67.0
MS.gene57383.t1 AT1G52880 39.080 87 41 3 3 77 91 177 8.30e-11 63.2
MS.gene57383.t1 AT3G44350 36.709 79 48 2 3 79 84 162 9.96e-11 62.0

Find 116 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTTCGACTCCAACTTTC+AGG 0.173690 4.2:+9131131 None:intergenic
ATGAAACGAGCTACGGAAAT+TGG 0.193778 4.2:-9133204 MS.gene57383:CDS
AACCAATATATCCACTAATT+TGG 0.228743 4.2:+9132176 None:intergenic
CGTGGATTGCTCGTCTGATT+TGG 0.251020 4.2:-9131282 MS.gene57383:CDS
TGGCTTCTACGGGCAATGTT+GGG 0.251527 4.2:-9131220 MS.gene57383:CDS
CTCCAAATTAGTGGATATAT+TGG 0.264406 4.2:-9132178 MS.gene57383:CDS
CCTAGGAATGGTGCACAATA+TGG 0.269913 4.2:-9132322 MS.gene57383:CDS
CCTGTTTGACATGGATTTGC+AGG 0.278572 4.2:+9132067 None:intergenic
CACACACGGGCTGGCTTCTA+CGG 0.300862 4.2:-9131231 MS.gene57383:CDS
TCATTAACAGTTTGATTGTC+TGG 0.311175 4.2:+9131641 None:intergenic
CTCCAGTCTTCCTCATTAAA+TGG 0.323348 4.2:+9132295 None:intergenic
ATTAGATGTCACAGGCAAAC+TGG 0.327321 4.2:+9132225 None:intergenic
CTGGCTTCTACGGGCAATGT+TGG 0.327912 4.2:-9131221 MS.gene57383:CDS
GGCTTCTACGGGCAATGTTG+GGG 0.330102 4.2:-9131219 MS.gene57383:CDS
CTTGCGAGTTCATGTCAAAT+AGG 0.339836 4.2:-9131812 MS.gene57383:CDS
GTGGATTGCTCGTCTGATTT+GGG 0.344683 4.2:-9131281 MS.gene57383:CDS
GAGCTACGGAAATTGGGTTT+TGG 0.345895 4.2:-9133197 MS.gene57383:CDS
ATCAGAATTGGCGCCTTCTC+TGG 0.347156 4.2:-9132134 MS.gene57383:CDS
CCTTCAAATTCTTGTCAAAC+AGG 0.351866 4.2:-9131938 MS.gene57383:CDS
TCTGTTTGACATGAATTTGC+AGG 0.364697 4.2:+9131854 None:intergenic
CCTGTTTGACATGAATTTGC+TGG 0.368512 4.2:+9131980 None:intergenic
TGACAAGAATTTGAAGGGTC+TGG 0.381024 4.2:+9131944 None:intergenic
GCATGACGACTTCGATTTCA+TGG 0.381469 4.2:-9131195 MS.gene57383:CDS
TCTGGATATGAATCATTTGC+AGG 0.389690 4.2:+9131659 None:intergenic
TCTGGATATGAATCATTTGC+AGG 0.389690 4.2:+9131770 None:intergenic
TCGTTAACAGCTTGATTGTC+TGG 0.392462 4.2:+9131752 None:intergenic
TGACAAGAATTCACAGGGTC+TGG 0.397096 4.2:+9131902 None:intergenic
CCTGTGAATTCTTGTCAAAC+AGG 0.404297 4.2:-9131896 MS.gene57383:CDS
TGACATGGATTTGCAGGGTC+AGG 0.408876 4.2:+9132073 None:intergenic
CCTGTGAATCCTTGTCAAAC+AGG 0.414356 4.2:-9132025 MS.gene57383:CDS
GATCAGAATCTCCAAATTAG+TGG 0.414516 4.2:-9132187 MS.gene57383:CDS
TCGACTCCAACTTTCAGGTT+GGG 0.415732 4.2:+9131136 None:intergenic
CCTGTTTGACAAGAATTTGA+AGG 0.420779 4.2:+9131938 None:intergenic
TGACAAGGATTCACAGGGTC+TGG 0.422865 4.2:+9132031 None:intergenic
CTGTTTGACATGAATTTGTT+GGG 0.425559 4.2:+9132110 None:intergenic
TGACATGAACTCGCAAGGTC+AGG 0.427713 4.2:+9131818 None:intergenic
CCAACAAATTCATGTCAAAC+AGG 0.430400 4.2:-9132109 MS.gene57383:CDS
CCTGTTTGACATGAATTTGT+TGG 0.430797 4.2:+9132109 None:intergenic
TGAAACGAGCTACGGAAATT+GGG 0.444296 4.2:-9133203 MS.gene57383:CDS
CCTGCAAATCCATGTCAAAC+AGG 0.444856 4.2:-9132067 MS.gene57383:CDS
GGCTGACAAAGGAATTGTTC+AGG 0.445801 4.2:-9133028 MS.gene57383:intron
CCATATTGTGCACCATTCCT+AGG 0.447789 4.2:+9132322 None:intergenic
GTGTGCTAAAGTCTGCATTC+TGG 0.450394 4.2:+9131249 None:intergenic
CCAGCAAATTCATGTCAAAC+AGG 0.451371 4.2:-9131980 MS.gene57383:CDS
ATCTAGACTCTGATACGTTC+TGG 0.454030 4.2:-9131163 MS.gene57383:CDS
TGACATGAATTTGCTGGGTC+AGG 0.454766 4.2:+9131986 None:intergenic
CATACCGTGTCAATCAGAAT+TGG 0.460006 4.2:-9132146 MS.gene57383:CDS
TGAGTATAGGCTTGAAGATA+AGG 0.460176 4.2:-9133055 MS.gene57383:CDS
GAATTCACAGGGTCTGGATA+AGG 0.466095 4.2:+9131908 None:intergenic
GGATTCACAGGGTCTGGATA+AGG 0.468391 4.2:+9132037 None:intergenic
TATGAATCATTTGCAGGGTC+GGG 0.476385 4.2:+9131665 None:intergenic
CTAGGAATGGTGCACAATAT+GGG 0.477134 4.2:-9132321 MS.gene57383:CDS
TATGAATCATTTGCAGGGTC+GGG 0.478405 4.2:+9131776 None:intergenic
TCATTTGCAGGGTCGGGCGC+AGG 0.479506 4.2:+9131671 None:intergenic
ATTGGGTTATGCATGAGTAT+AGG 0.479985 4.2:-9133068 MS.gene57383:CDS
GAATTTGCAGGGTCGGAAGC+AGG 0.480953 4.2:+9131866 None:intergenic
TTCGACTCCAACTTTCAGGT+TGG 0.483370 4.2:+9131135 None:intergenic
CCTGTTTGACAAGGATTCAC+AGG 0.487590 4.2:+9132025 None:intergenic
GACCATTTAATGAGGAAGAC+TGG 0.495616 4.2:-9132297 MS.gene57383:CDS
TCGTGGTGATCGAACCGATT+GGG 0.500477 4.2:-9133085 MS.gene57383:CDS
GGCAGACCCAACCTGAAAGT+TGG 0.501795 4.2:-9131142 MS.gene57383:CDS
CCTGTTTGACAAGAATTCAC+AGG 0.507170 4.2:+9131896 None:intergenic
ACACACGGGCTGGCTTCTAC+GGG 0.510540 4.2:-9131230 MS.gene57383:CDS
AGTGCAGCAGATTCAGCAAA+AGG 0.512913 4.2:+9132253 None:intergenic
GCTTCTACGGGCAATGTTGG+GGG 0.513160 4.2:-9131218 MS.gene57383:CDS
AGACTTTAGCACACACGGGC+TGG 0.515131 4.2:-9131240 MS.gene57383:CDS
TCGTCTGATTTGGGATCTGT+TGG 0.516876 4.2:-9131272 MS.gene57383:CDS
CTGTTTGACATGAATTTGCT+GGG 0.522565 4.2:+9131981 None:intergenic
CAATTCTGATTGACACGGTA+TGG 0.524497 4.2:+9132147 None:intergenic
CTGTTTGACATGAATTTGCA+GGG 0.530109 4.2:+9131855 None:intergenic
CTCGTGGTGATCGAACCGAT+TGG 0.531457 4.2:-9133086 MS.gene57383:CDS
ATATGAATCATTTGCAGGGT+CGG 0.532792 4.2:+9131664 None:intergenic
GAATTTGTTGGGTCCAGAGA+AGG 0.534027 4.2:+9132121 None:intergenic
ATATGAATCATTTGCAGGGT+CGG 0.534812 4.2:+9131775 None:intergenic
GGATTCCTACGTAATCTGTA+AGG 0.535028 4.2:-9132368 MS.gene57383:CDS
CTGTTTGACAAGAATTTGAA+GGG 0.535613 4.2:+9131939 None:intergenic
TCATTTGCAGGGTCGGGCAA+AGG 0.536379 4.2:+9131782 None:intergenic
GACATGAACTCGCAAGGTCA+GGG 0.545876 4.2:+9131819 None:intergenic
CTGTTTGACATGGATTTGCA+GGG 0.546270 4.2:+9132068 None:intergenic
TAGGCTTGAAGATAAGGACT+TGG 0.547580 4.2:-9133049 MS.gene57383:CDS
CAACAGAATAATCAAACGGT+GGG 0.550179 4.2:-9133147 MS.gene57383:CDS
ATACTCATGCATAACCCAAT+CGG 0.550912 4.2:+9133071 None:intergenic
GAATTTGAAGGGTCTGGAGA+AGG 0.554806 4.2:+9131950 None:intergenic
TTGACATGAATTTGCAGGGT+CGG 0.556895 4.2:+9131859 None:intergenic
GAATTTGCTGGGTCAGGAGA+CGG 0.560757 4.2:+9131992 None:intergenic
GGCATAAATCCTGTTTGACA+TGG 0.562278 4.2:+9132058 None:intergenic
GACTGGAGTGATGATGAAGT+AGG 0.564465 4.2:-9132280 MS.gene57383:CDS
CTTCTACGGGCAATGTTGGG+GGG 0.567691 4.2:-9131217 MS.gene57383:CDS
GGATTTGCAGGGTCAGGAGA+AGG 0.569179 4.2:+9132079 None:intergenic
TTAGATGTCACAGGCAAACT+GGG 0.572296 4.2:+9132226 None:intergenic
GATAAGGACTTGGCTGACAA+AGG 0.573980 4.2:-9133039 MS.gene57383:CDS
GAAGGTCCTGGTCCTAGGAA+TGG 0.591114 4.2:-9132334 MS.gene57383:CDS
CTGTTTGACAAGAATTCACA+GGG 0.591836 4.2:+9131897 None:intergenic
CTGTTTGACAAGGATTCACA+GGG 0.595085 4.2:+9132026 None:intergenic
TGTTCAACAGAATAATCAAA+CGG 0.610587 4.2:-9133151 MS.gene57383:CDS
CTATTTGACATGAACTCGCA+AGG 0.614626 4.2:+9131813 None:intergenic
ACAGAACTATTAGATGTCAC+AGG 0.615324 4.2:+9132217 None:intergenic
AGACAACGGCGTATTGCCTG+AGG 0.618252 4.2:-9131582 MS.gene57383:intron
CTGGATATGAATCATTTGCA+GGG 0.618285 4.2:+9131660 None:intergenic
CTGGATATGAATCATTTGCA+GGG 0.618285 4.2:+9131771 None:intergenic
AATGCAGACTTTAGCACACA+CGG 0.626353 4.2:-9131245 MS.gene57383:CDS
ATAAATCCTCCTGTTTGACA+AGG 0.629631 4.2:+9132016 None:intergenic
AAAACCCTAATATTTCACAC+TGG 0.629779 4.2:-9133117 MS.gene57383:CDS
GCCAAGGATGAAACGAGCTA+CGG 0.632310 4.2:-9133211 None:intergenic
TGTGCACCATTCCTAGGACC+AGG 0.638891 4.2:+9132328 None:intergenic
ACATGAACTCGCAAGGTCAG+GGG 0.640717 4.2:+9131820 None:intergenic
ATATGGGAGACCATTTAATG+AGG 0.644918 4.2:-9132305 MS.gene57383:CDS
GTGAATCCTTGTCAAACAGG+AGG 0.649506 4.2:-9132022 MS.gene57383:CDS
AACAGAATAATCAAACGGTG+GGG 0.675165 4.2:-9133146 MS.gene57383:CDS
AAATACCTTACAGATTACGT+AGG 0.675415 4.2:+9132363 None:intergenic
TCAACAGAATAATCAAACGG+TGG 0.680625 4.2:-9133148 MS.gene57383:CDS
ATGCAGACTTTAGCACACAC+GGG 0.691963 4.2:-9131244 MS.gene57383:CDS
TGTCAGGAAAACATTGCTGA+AGG 0.693858 4.2:-9131341 MS.gene57383:intron
GGCGCCAATTCTGATTGACA+CGG 0.715605 4.2:+9132142 None:intergenic
CACACTGGAAAATCACCTCG+TGG 0.720810 4.2:-9133102 MS.gene57383:CDS
CAATCGGTTCGATCACCACG+AGG 0.739524 4.2:+9133087 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATTAAAAGAAAGCAA+GGG + chr4.2:9131880-9131899 None:intergenic 15.0%
!! AATAACATAATTCTATTTCA+AGG + chr4.2:9131714-9131733 None:intergenic 15.0%
!! AGTAAAAAATGCACTTTATA+AGG + chr4.2:9131756-9131775 None:intergenic 20.0%
!! CAAATAATTAAAAGAAAGCA+AGG + chr4.2:9131881-9131900 None:intergenic 20.0%
! AAAATGGCATTAACATTATG+AGG + chr4.2:9132901-9132920 None:intergenic 25.0%
! AACCAATATATCCACTAATT+TGG + chr4.2:9132158-9132177 None:intergenic 25.0%
! ATATGGAGATATATGTGTAT+TGG - chr4.2:9131362-9131381 MS.gene57383:intron 25.0%
! ATCGCTATGATTTAGTAAAA+TGG + chr4.2:9132917-9132936 None:intergenic 25.0%
! TGATGTTTCTTTATTATGTC+TGG - chr4.2:9132824-9132843 MS.gene57383:intron 25.0%
! TGTTCAACAGAATAATCAAA+CGG - chr4.2:9131180-9131199 MS.gene57383:CDS 25.0%
!! ATTTTCCAGTGTGAAATATT+AGG + chr4.2:9131222-9131241 None:intergenic 25.0%
!! TGTAAGGTATTTCAAAAAGA+AGG - chr4.2:9131979-9131998 MS.gene57383:CDS 25.0%
!! TTTTCCAGTGTGAAATATTA+GGG + chr4.2:9131221-9131240 None:intergenic 25.0%
!!! ATGTTTTTAACAAGTTCTCT+TGG - chr4.2:9131933-9131952 MS.gene57383:CDS 25.0%
!!! TGTTTTGTATGAGCTTTATA+TGG - chr4.2:9131345-9131364 MS.gene57383:intron 25.0%
AAAACCCTAATATTTCACAC+TGG - chr4.2:9131214-9131233 MS.gene57383:CDS 30.0%
AAAGTAGTTGTGTCCTTTAA+TGG + chr4.2:9131588-9131607 None:intergenic 30.0%
AAATACCTTACAGATTACGT+AGG + chr4.2:9131971-9131990 None:intergenic 30.0%
AACATATTCACAACGAGAAT+AGG + chr4.2:9131918-9131937 None:intergenic 30.0%
ACACAACTACTTTAAATGCT+AGG - chr4.2:9131595-9131614 MS.gene57383:CDS 30.0%
AGTTATCCTTCAAGAAATCA+AGG + chr4.2:9132949-9132968 None:intergenic 30.0%
CACAACTACTTTAAATGCTA+GGG - chr4.2:9131596-9131615 MS.gene57383:CDS 30.0%
CTGTTTGACAAGAATTTGAA+GGG + chr4.2:9132395-9132414 None:intergenic 30.0%
TACTTTAAATGCTAGGGTTA+GGG - chr4.2:9131602-9131621 MS.gene57383:CDS 30.0%
TATAGTCCTTGATTTCTTGA+AGG - chr4.2:9132940-9132959 MS.gene57383:intron 30.0%
TCATTAACAGTTTGATTGTC+TGG + chr4.2:9132693-9132712 None:intergenic 30.0%
TCTTATCTGTTACATTGGAA+AGG + chr4.2:9131498-9131517 None:intergenic 30.0%
! CTCCAAATTAGTGGATATAT+TGG - chr4.2:9132153-9132172 MS.gene57383:CDS 30.0%
! CTGTTTGACATGAATTTGTT+GGG + chr4.2:9132224-9132243 None:intergenic 30.0%
! CTTGATATTTTCGAAGACAA+CGG - chr4.2:9132735-9132754 MS.gene57383:intron 30.0%
! TCTTTCTACTTGTGTTTTTC+TGG - chr4.2:9132793-9132812 MS.gene57383:intron 30.0%
! TTGACATTATTATTGGTGTC+AGG - chr4.2:9132974-9132993 MS.gene57383:intron 30.0%
!! CTGAGTGTTGACATTATTAT+TGG - chr4.2:9132967-9132986 MS.gene57383:intron 30.0%
!!! CTCTTAACTGACTTTTTTGA+TGG - chr4.2:9133017-9133036 MS.gene57383:intron 30.0%
AAAACAGATTAGCATACCTC+AGG + chr4.2:9132768-9132787 None:intergenic 35.0%
AACAGAATAATCAAACGGTG+GGG - chr4.2:9131185-9131204 MS.gene57383:CDS 35.0%
AATGGCATTAGTGACACAAT+AGG + chr4.2:9131570-9131589 None:intergenic 35.0%
ACAGAACTATTAGATGTCAC+AGG + chr4.2:9132117-9132136 None:intergenic 35.0%
ATAAATCCTCCTGTTTGACA+AGG + chr4.2:9132318-9132337 None:intergenic 35.0%
ATACTCATGCATAACCCAAT+CGG + chr4.2:9131263-9131282 None:intergenic 35.0%
ATATGAATCATTTGCAGGGT+CGG + chr4.2:9132559-9132578 None:intergenic 35.0%
ATATGGGAGACCATTTAATG+AGG - chr4.2:9132026-9132045 MS.gene57383:CDS 35.0%
ATATTGAACTGGTGAATACG+TGG - chr4.2:9131392-9131411 MS.gene57383:intron 35.0%
ATTGGGTTATGCATGAGTAT+AGG - chr4.2:9131263-9131282 MS.gene57383:CDS 35.0%
CAACAGAATAATCAAACGGT+GGG - chr4.2:9131184-9131203 MS.gene57383:CDS 35.0%
CCAACAAATTCATGTCAAAC+AGG - chr4.2:9132222-9132241 MS.gene57383:CDS 35.0%
CCTGTTTGACAAGAATTTGA+AGG + chr4.2:9132396-9132415 None:intergenic 35.0%
CCTGTTTGACATGAATTTGT+TGG + chr4.2:9132225-9132244 None:intergenic 35.0%
CCTTCAAATTCTTGTCAAAC+AGG - chr4.2:9132393-9132412 MS.gene57383:intron 35.0%
CTACTTTAAATGCTAGGGTT+AGG - chr4.2:9131601-9131620 MS.gene57383:CDS 35.0%
CTGGATATGAATCATTTGCA+GGG + chr4.2:9132563-9132582 None:intergenic 35.0%
CTGTTTGACAAGAATTCACA+GGG + chr4.2:9132437-9132456 None:intergenic 35.0%
CTGTTTGACATGAATTTGCA+GGG + chr4.2:9132479-9132498 None:intergenic 35.0%
GATCAGAATCTCCAAATTAG+TGG - chr4.2:9132144-9132163 MS.gene57383:CDS 35.0%
GTATCAAGACTGTGAGTAAA+AGG + chr4.2:9131461-9131480 None:intergenic 35.0%
GTATTCACCAGTTCAATATG+TGG + chr4.2:9131391-9131410 None:intergenic 35.0%
GTATTTCAAAAAGAAGGTCC+TGG - chr4.2:9131985-9132004 MS.gene57383:CDS 35.0%
TATTCACAACGAGAATAGGA+TGG + chr4.2:9131914-9131933 None:intergenic 35.0%
TCAACAGAATAATCAAACGG+TGG - chr4.2:9131183-9131202 MS.gene57383:CDS 35.0%
TCCAATGTAACAGATAAGAC+CGG - chr4.2:9131499-9131518 MS.gene57383:intron 35.0%
TCTGGATATGAATCATTTGC+AGG + chr4.2:9132564-9132583 None:intergenic 35.0%
TCTGTTTGACATGAATTTGC+AGG + chr4.2:9132480-9132499 None:intergenic 35.0%
TGAGTATAGGCTTGAAGATA+AGG - chr4.2:9131276-9131295 MS.gene57383:CDS 35.0%
TGGAAAGGAATATATGCCAA+TGG + chr4.2:9131483-9131502 None:intergenic 35.0%
TTATATGCATTCGCAGTCAA+AGG + chr4.2:9131434-9131453 None:intergenic 35.0%
TTATTTCGACTCCAACTTTC+AGG + chr4.2:9133203-9133222 None:intergenic 35.0%
! CTGTTTGACATGAATTTGCT+GGG + chr4.2:9132353-9132372 None:intergenic 35.0%
! TGTGCATCAAAAGCATATTC+CGG + chr4.2:9131521-9131540 None:intergenic 35.0%
! TGTGTCACTAATGCCATTAA+AGG - chr4.2:9131572-9131591 MS.gene57383:intron 35.0%
!! TTCATGATAGTTTTGCATGC+AGG - chr4.2:9131683-9131702 MS.gene57383:CDS 35.0%
!!! AACTGACTTTTTTGATGGCT+TGG - chr4.2:9133022-9133041 MS.gene57383:intron 35.0%
AATGCAGACTTTAGCACACA+CGG - chr4.2:9133086-9133105 MS.gene57383:CDS 40.0%
ACAAGTTCTCTTGGTATGAC+AGG - chr4.2:9131942-9131961 MS.gene57383:CDS 40.0%
ACTCACAGTCTTGATACCAT+TGG - chr4.2:9131464-9131483 MS.gene57383:intron 40.0%
ATCTAGACTCTGATACGTTC+TGG - chr4.2:9133168-9133187 MS.gene57383:CDS 40.0%
ATGAAACGAGCTACGGAAAT+TGG - chr4.2:9131127-9131146 MS.gene57383:CDS 40.0%
ATTAGATGTCACAGGCAAAC+TGG + chr4.2:9132109-9132128 None:intergenic 40.0%
CAATTCTGATTGACACGGTA+TGG + chr4.2:9132187-9132206 None:intergenic 40.0%
CATACCGTGTCAATCAGAAT+TGG - chr4.2:9132185-9132204 MS.gene57383:CDS 40.0%
CCAGCAAATTCATGTCAAAC+AGG - chr4.2:9132351-9132370 MS.gene57383:CDS 40.0%
CCTGTGAATTCTTGTCAAAC+AGG - chr4.2:9132435-9132454 MS.gene57383:intron 40.0%
CCTGTTTGACAAGAATTCAC+AGG + chr4.2:9132438-9132457 None:intergenic 40.0%
CCTGTTTGACATGAATTTGC+TGG + chr4.2:9132354-9132373 None:intergenic 40.0%
CTAGGAATGGTGCACAATAT+GGG - chr4.2:9132010-9132029 MS.gene57383:CDS 40.0%
CTATTTGACATGAACTCGCA+AGG + chr4.2:9132521-9132540 None:intergenic 40.0%
CTCCAGTCTTCCTCATTAAA+TGG + chr4.2:9132039-9132058 None:intergenic 40.0%
CTGTTTGACAAGGATTCACA+GGG + chr4.2:9132308-9132327 None:intergenic 40.0%
CTGTTTGACATGGATTTGCA+GGG + chr4.2:9132266-9132285 None:intergenic 40.0%
CTTGCGAGTTCATGTCAAAT+AGG - chr4.2:9132519-9132538 MS.gene57383:intron 40.0%
GACCATTTAATGAGGAAGAC+TGG - chr4.2:9132034-9132053 MS.gene57383:CDS 40.0%
GGATTCCTACGTAATCTGTA+AGG - chr4.2:9131963-9131982 MS.gene57383:CDS 40.0%
GGCATAAATCCTGTTTGACA+TGG + chr4.2:9132276-9132295 None:intergenic 40.0%
TAGGCTTGAAGATAAGGACT+TGG - chr4.2:9131282-9131301 MS.gene57383:CDS 40.0%
TATGAATCATTTGCAGGGTC+GGG + chr4.2:9132558-9132577 None:intergenic 40.0%
TCGTTAACAGCTTGATTGTC+TGG + chr4.2:9132582-9132601 None:intergenic 40.0%
TGAAACGAGCTACGGAAATT+GGG - chr4.2:9131128-9131147 MS.gene57383:CDS 40.0%
TGACAAGAATTTGAAGGGTC+TGG + chr4.2:9132390-9132409 None:intergenic 40.0%
TGTCAGGAAAACATTGCTGA+AGG - chr4.2:9132990-9133009 MS.gene57383:intron 40.0%
TTAGATGTCACAGGCAAACT+GGG + chr4.2:9132108-9132127 None:intergenic 40.0%
TTGACATGAATTTGCAGGGT+CGG + chr4.2:9132475-9132494 None:intergenic 40.0%
TTGGTTGCCACATATTGAAC+TGG - chr4.2:9131381-9131400 MS.gene57383:intron 40.0%
! TCCGGTCTTATCTGTTACAT+TGG + chr4.2:9131503-9131522 None:intergenic 40.0%
!!! ATTGGGTTTTGGAAAGCTAC+TGG - chr4.2:9131145-9131164 MS.gene57383:CDS 40.0%
AAAAAGAAGGTCCTGGTCCT+AGG - chr4.2:9131992-9132011 MS.gene57383:CDS 45.0%
AGGAGACAATGCAAACTGCA+GGG + chr4.2:9132881-9132900 None:intergenic 45.0%
AGTGCAGCAGATTCAGCAAA+AGG + chr4.2:9132081-9132100 None:intergenic 45.0%
ATCCTTCGAAGGGTGAAATG+TGG - chr4.2:9131627-9131646 MS.gene57383:CDS 45.0%
ATGCAGACTTTAGCACACAC+GGG - chr4.2:9133087-9133106 MS.gene57383:CDS 45.0%
CCATATTGTGCACCATTCCT+AGG + chr4.2:9132012-9132031 None:intergenic 45.0%
CCTAGGAATGGTGCACAATA+TGG - chr4.2:9132009-9132028 MS.gene57383:CDS 45.0%
CCTGCAAATCCATGTCAAAC+AGG - chr4.2:9132264-9132283 MS.gene57383:CDS 45.0%
CCTGTGAATCCTTGTCAAAC+AGG - chr4.2:9132306-9132325 MS.gene57383:CDS 45.0%
CCTGTTTGACAAGGATTCAC+AGG + chr4.2:9132309-9132328 None:intergenic 45.0%
CCTGTTTGACATGGATTTGC+AGG + chr4.2:9132267-9132286 None:intergenic 45.0%
GAATTCACAGGGTCTGGATA+AGG + chr4.2:9132426-9132445 None:intergenic 45.0%
GAATTTGAAGGGTCTGGAGA+AGG + chr4.2:9132384-9132403 None:intergenic 45.0%
GATAAGGACTTGGCTGACAA+AGG - chr4.2:9131292-9131311 MS.gene57383:CDS 45.0%
GCATGACGACTTCGATTTCA+TGG - chr4.2:9133136-9133155 MS.gene57383:CDS 45.0%
GGCATTAGTGACACAATAGG+TGG + chr4.2:9131567-9131586 None:intergenic 45.0%
GGCTGACAAAGGAATTGTTC+AGG - chr4.2:9131303-9131322 MS.gene57383:CDS 45.0%
GGTTAGGGTTATCCTTCGAA+GGG - chr4.2:9131617-9131636 MS.gene57383:CDS 45.0%
GTGAATCCTTGTCAAACAGG+AGG - chr4.2:9132309-9132328 MS.gene57383:CDS 45.0%
GTGTGCTAAAGTCTGCATTC+TGG + chr4.2:9133085-9133104 None:intergenic 45.0%
TGACAAGAATTCACAGGGTC+TGG + chr4.2:9132432-9132451 None:intergenic 45.0%
! GACTGGAGTGATGATGAAGT+AGG - chr4.2:9132051-9132070 MS.gene57383:CDS 45.0%
! GAGCTACGGAAATTGGGTTT+TGG - chr4.2:9131134-9131153 MS.gene57383:CDS 45.0%
! GTGGATTGCTCGTCTGATTT+GGG - chr4.2:9133050-9133069 MS.gene57383:CDS 45.0%
! TTCGACTCCAACTTTCAGGT+TGG + chr4.2:9133199-9133218 None:intergenic 45.0%
!! GAATTTGTTGGGTCCAGAGA+AGG + chr4.2:9132213-9132232 None:intergenic 45.0%
!! TCGACTCCAACTTTCAGGTT+GGG + chr4.2:9133198-9133217 None:intergenic 45.0%
!! TCGTCTGATTTGGGATCTGT+TGG - chr4.2:9133059-9133078 MS.gene57383:CDS 45.0%
!! TGACATGAATTTGCTGGGTC+AGG + chr4.2:9132348-9132367 None:intergenic 45.0%
!! TTTTGATGGCTTGGAAGACG+TGG - chr4.2:9133031-9133050 MS.gene57383:CDS 45.0%
!!! GTTTTGGAAAGCTACTGGTC+AGG - chr4.2:9131150-9131169 MS.gene57383:CDS 45.0%
ACATGAACTCGCAAGGTCAG+GGG + chr4.2:9132514-9132533 None:intergenic 50.0%
ATCAGAATTGGCGCCTTCTC+TGG - chr4.2:9132197-9132216 MS.gene57383:CDS 50.0%
CACACTGGAAAATCACCTCG+TGG - chr4.2:9131229-9131248 MS.gene57383:CDS 50.0%
CTCCACATTTCACCCTTCGA+AGG + chr4.2:9131632-9131651 None:intergenic 50.0%
GACATGAACTCGCAAGGTCA+GGG + chr4.2:9132515-9132534 None:intergenic 50.0%
GAGGAGACAATGCAAACTGC+AGG + chr4.2:9132882-9132901 None:intergenic 50.0%
GGATTCACAGGGTCTGGATA+AGG + chr4.2:9132297-9132316 None:intergenic 50.0%
GGCGCCAATTCTGATTGACA+CGG + chr4.2:9132192-9132211 None:intergenic 50.0%
GGGTTAGGGTTATCCTTCGA+AGG - chr4.2:9131616-9131635 MS.gene57383:CDS 50.0%
TCGTGGTGATCGAACCGATT+GGG - chr4.2:9131246-9131265 MS.gene57383:CDS 50.0%
TGACAAGGATTCACAGGGTC+TGG + chr4.2:9132303-9132322 None:intergenic 50.0%
TGACATGAACTCGCAAGGTC+AGG + chr4.2:9132516-9132535 None:intergenic 50.0%
TGACATGGATTTGCAGGGTC+AGG + chr4.2:9132261-9132280 None:intergenic 50.0%
TGGCTTCTACGGGCAATGTT+GGG - chr4.2:9133111-9133130 MS.gene57383:CDS 50.0%
! CGTGGATTGCTCGTCTGATT+TGG - chr4.2:9133049-9133068 MS.gene57383:CDS 50.0%
!! GAATTTGCTGGGTCAGGAGA+CGG + chr4.2:9132342-9132361 None:intergenic 50.0%
AGACAACGGCGTATTGCCTG+AGG - chr4.2:9132749-9132768 MS.gene57383:intron 55.0%
AGACTTTAGCACACACGGGC+TGG - chr4.2:9133091-9133110 MS.gene57383:CDS 55.0%
CTCGTGGTGATCGAACCGAT+TGG - chr4.2:9131245-9131264 MS.gene57383:CDS 55.0%
CTGGCTTCTACGGGCAATGT+TGG - chr4.2:9133110-9133129 MS.gene57383:CDS 55.0%
CTTCTACGGGCAATGTTGGG+GGG - chr4.2:9133114-9133133 MS.gene57383:CDS 55.0%
GAAGGTCCTGGTCCTAGGAA+TGG - chr4.2:9131997-9132016 MS.gene57383:CDS 55.0%
GAATTTGCAGGGTCGGAAGC+AGG + chr4.2:9132468-9132487 None:intergenic 55.0%
GCTTCTACGGGCAATGTTGG+GGG - chr4.2:9133113-9133132 MS.gene57383:CDS 55.0%
GGATTTGCAGGGTCAGGAGA+AGG + chr4.2:9132255-9132274 None:intergenic 55.0%
GGCAGACCCAACCTGAAAGT+TGG - chr4.2:9133189-9133208 MS.gene57383:CDS 55.0%
GGCTTCTACGGGCAATGTTG+GGG - chr4.2:9133112-9133131 MS.gene57383:CDS 55.0%
TCATTTGCAGGGTCGGGCAA+AGG + chr4.2:9132552-9132571 None:intergenic 55.0%
TGTGCACCATTCCTAGGACC+AGG + chr4.2:9132006-9132025 None:intergenic 55.0%
!! CAATCGGTTCGATCACCACG+AGG + chr4.2:9131247-9131266 None:intergenic 55.0%
!! ACACACGGGCTGGCTTCTAC+GGG - chr4.2:9133101-9133120 MS.gene57383:CDS 60.0%
!! CACACACGGGCTGGCTTCTA+CGG - chr4.2:9133100-9133119 MS.gene57383:CDS 60.0%
TCATTTGCAGGGTCGGGCGC+AGG + chr4.2:9132663-9132682 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 9131127 9133226 9131127 ID=MS.gene57383
chr4.2 mRNA 9131127 9133226 9131127 ID=MS.gene57383.t1;Parent=MS.gene57383
chr4.2 exon 9133029 9133226 9133029 ID=MS.gene57383.t1.exon1;Parent=MS.gene57383.t1
chr4.2 CDS 9133029 9133226 9133029 ID=cds.MS.gene57383.t1;Parent=MS.gene57383.t1
chr4.2 exon 9131583 9132389 9131583 ID=MS.gene57383.t1.exon2;Parent=MS.gene57383.t1
chr4.2 CDS 9131583 9132389 9131583 ID=cds.MS.gene57383.t1;Parent=MS.gene57383.t1
chr4.2 exon 9131127 9131357 9131127 ID=MS.gene57383.t1.exon3;Parent=MS.gene57383.t1
chr4.2 CDS 9131127 9131357 9131127 ID=cds.MS.gene57383.t1;Parent=MS.gene57383.t1
Gene Sequence

>MS.gene57383

ATGAAACGAGCTACGGAAATTGGGTTTTGGAAAGCTACTGGTCAGGATCGAGCTGTTCAACAGAATAATCAAACGGTGGGGATGATTAAAACCCTAATATTTCACACTGGAAAATCACCTCGTGGTGATCGAACCGATTGGGTTATGCATGAGTATAGGCTTGAAGATAAGGACTTGGCTGACAAAGGAATTGTTCAGGTAGTCATTTCTTTCTTAGTTGTTTTGTATGAGCTTTATATGGAGATATATGTGTATTGGTTGCCACATATTGAACTGGTGAATACGTGGCAGATTCGTAGTTGTGCCTTTGACTGCGAATGCATATAAGATACCTTTTACTCACAGTCTTGATACCATTGGCATATATTCCTTTCCAATGTAACAGATAAGACCGGAATATGCTTTTGATGCACAAATTTACATTTGTATTCATGTCTCCACCTATTGTGTCACTAATGCCATTAAAGGACACAACTACTTTAAATGCTAGGGTTAGGGTTATCCTTCGAAGGGTGAAATGTGGAGTTCTAACTTCTAATAATTGATTACAGTGTAGTTCATGATAGTTTTGCATGCAGGATAATCCTTGAAATAGAATTATGTTATTTCATGATAGTTTTACATTACCTTATAAAGTGCATTTTTTACTTTCGAATAGTTGAATTCTTGAAATAGAATTATGCTATTGCATGTTTTGTTTGACTAACACTCAAAATGAGATTTGCTGTTTTAACACGACAAAGTTAGTATCCCTTGCTTTCTTTTAATTATTTGACAGTTTTTTCCATCCTATTCTCGTTGTGAATATGTTTTTAACAAGTTCTCTTGGTATGACAGGATTCCTACGTAATCTGTAAGGTATTTCAAAAAGAAGGTCCTGGTCCTAGGAATGGTGCACAATATGGGAGACCATTTAATGAGGAAGACTGGAGTGATGATGAAGTAGGAATACCTTTTGCTGAATCTGCTGCACTAGTTCCCAGTTTGCCTGTGACATCTAATAGTTCTGTTCTAAATGATCAGAATCTCCAAATTAGTGGATATATTGGTTCGATATCCATACCGTGTCAATCAGAATTGGCGCCTTCTCTGGACCCAACAAATTCATGTCAAACAGGATTGACACCTTCTCCTGACCCTGCAAATCCATGTCAAACAGGATTTATGCCTTATCCAGACCCTGTGAATCCTTGTCAAACAGGAGGATTTATGCCGTCTCCTGACCCAGCAAATTCATGTCAAACAGGATTGACGCCTTCTCCAGACCCTTCAAATTCTTGTCAAACAGGATTTATGCCTTATCCAGACCCTGTGAATTCTTGTCAAACAGGATTTATGCCTGCTTCCGACCCTGCAAATTCATGTCAAACAGAATTTATGCTGTCCCCTGACCTTGCGAGTTCATGTCAAATAGGATTGATGCCTTTGCCCGACCCTGCAAATGATTCATATCCAGACAATCAAGCTGTTAACGACGATGATGATGATGATATTCTAGCAATGCTTGATATTTTCAAAGACAACAGCGTATTGCCTGCGCCCGACCCTGCAAATGATTCATATCCAGACAATCAAACTGTTAATGATGATGATGATATTCTAGCAATGCTTGATATTTTCGAAGACAACGGCGTATTGCCTGAGGTATGCTAATCTGTTTTTTTCTTCTTTCTACTTGTGTTTTTCTGGAAACAGTGTGATGTTTCTTTATTATGTCTGGTTTTAGTATTTGTAGACTTGTTTTATCTATTCCCTGCAGTTTGCATTGTCTCCTCATAATGTTAATGCCATTTTACTAAATCATAGCGATGTATATAGTCCTTGATTTCTTGAAGGATAACTGAGTGTTGACATTATTATTGGTGTCAGGAAAACATTGCTGAAGGTGCACTCTTAACTGACTTTTTTGATGGCTTGGAAGACGTGGATTGCTCGTCTGATTTGGGATCTGTTGGCCAGAATGCAGACTTTAGCACACACGGGCTGGCTTCTACGGGCAATGTTGGGGGGCATGACGACTTCGATTTCATGGAGTTGATTGATCTAGACTCTGATACGTTCTGGCAGACCCAACCTGAAAGTTGGAGTCGAAATAAATAA
Protein sequence

>MS.gene57383.t1

MKRATEIGFWKATGQDRAVQQNNQTVGMIKTLIFHTGKSPRGDRTDWVMHEYRLEDKDLADKGIVQDSYVICKVFQKEGPGPRNGAQYGRPFNEEDWSDDEVGIPFAESAALVPSLPVTSNSSVLNDQNLQISGYIGSISIPCQSELAPSLDPTNSCQTGLTPSPDPANPCQTGFMPYPDPVNPCQTGGFMPSPDPANSCQTGLTPSPDPSNSCQTGFMPYPDPVNSCQTGFMPASDPANSCQTEFMLSPDLASSCQIGLMPLPDPANDSYPDNQAVNDDDDDDILAMLDIFKDNSVLPAPDPANDSYPDNQTVNDDDDILAMLDIFEDNGVLPEENIAEGALLTDFFDGLEDVDCSSDLGSVGQNADFSTHGLASTGNVGGHDDFDFMELIDLDSDTFWQTQPESWSRNK