AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene57863

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57863.t1 MTR_5g080470 95.855 193 6 2 1 192 1 192 1.84e-135 377
MS.gene57863.t1 MTR_7g096610 55.405 148 61 2 1 147 2 145 2.48e-52 167
MS.gene57863.t1 MTR_1g070205 68.627 102 32 0 8 109 13 114 9.25e-49 159
MS.gene57863.t1 MTR_7g096530 65.000 100 35 0 2 101 9 108 4.75e-46 151
MS.gene57863.t1 MTR_1g070220 49.655 145 59 2 5 149 13 143 4.41e-44 145
MS.gene57863.t1 MTR_8g036105 59.434 106 43 0 5 110 16 121 8.79e-44 145
MS.gene57863.t1 MTR_8g036085 62.264 106 40 0 8 113 24 129 8.81e-44 145
MS.gene57863.t1 MTR_6g027710 42.932 191 79 5 6 170 39 225 1.03e-43 145
MS.gene57863.t1 MTR_7g074990 63.636 99 36 0 8 106 21 119 6.59e-41 139
MS.gene57863.t1 MTR_7g075230 62.626 99 35 2 5 101 10 108 7.53e-40 134
MS.gene57863.t1 MTR_7g033800 55.670 97 42 1 6 102 10 105 4.92e-34 119
MS.gene57863.t1 MTR_3g071590 54.082 98 44 1 6 103 7 103 2.67e-33 117
MS.gene57863.t1 MTR_6g027700 50.943 106 52 0 1 106 1 106 3.06e-33 118
MS.gene57863.t1 MTR_4g105170 39.412 170 87 4 4 171 8 163 1.01e-32 116
MS.gene57863.t1 MTR_5g083230 46.825 126 61 2 3 123 2 126 2.46e-32 114
MS.gene57863.t1 MTR_6g005070 52.577 97 45 1 6 102 8 103 4.70e-32 113
MS.gene57863.t1 MTR_3g031660 47.934 121 56 3 3 117 2 121 4.72e-32 114
MS.gene57863.t1 MTR_3g077240 51.485 101 48 1 2 102 5 104 5.50e-32 114
MS.gene57863.t1 MTR_4g083680 50.495 101 49 1 3 103 11 110 1.22e-31 113
MS.gene57863.t1 MTR_2g068760 53.535 99 45 1 3 101 9 106 1.64e-31 112
MS.gene57863.t1 MTR_6g005080 51.546 97 46 1 6 102 9 104 1.84e-30 108
MS.gene57863.t1 MTR_5g083010 44.340 106 58 1 5 110 9 113 2.80e-30 109
MS.gene57863.t1 MTR_5g017950 52.577 97 45 1 6 102 7 102 2.85e-30 113
MS.gene57863.t1 MTR_3g073690 46.667 105 55 1 5 109 7 110 3.13e-30 110
MS.gene57863.t1 MTR_3g094690 51.515 99 47 1 6 104 46 143 3.64e-30 111
MS.gene57863.t1 MTR_5g083960 50.505 99 48 1 6 104 38 135 3.79e-30 110
MS.gene57863.t1 MTR_3g071420 47.959 98 50 1 6 103 13 109 6.95e-30 108
MS.gene57863.t1 MTR_3g452660 45.872 109 58 1 1 109 1 108 1.55e-29 110
MS.gene57863.t1 MTR_3g094690 51.515 99 46 2 6 104 46 142 2.00e-28 106
MS.gene57863.t1 MTR_2g093310 39.200 125 70 2 6 125 32 155 3.52e-28 105
MS.gene57863.t1 MTR_4g060950 46.903 113 51 3 6 117 23 127 1.01e-27 103
MS.gene57863.t1 MTR_5g075020 53.659 82 37 1 6 87 42 122 2.14e-25 98.6
MS.gene57863.t1 MTR_5g075020 53.659 82 37 1 6 87 46 126 2.30e-25 98.6
MS.gene57863.t1 MTR_1g095850 46.809 94 49 1 8 101 73 165 3.87e-25 97.8
MS.gene57863.t1 MTR_8g040900 50.575 87 42 1 1 87 1 86 1.01e-24 96.7
MS.gene57863.t1 MTR_7g028905 42.308 104 59 1 6 109 4 106 7.63e-24 91.3
MS.gene57863.t1 MTR_5g093010 42.157 102 58 1 8 109 6 106 1.38e-23 91.7
MS.gene57863.t1 MTR_4g107450 38.384 99 60 1 3 101 6 103 2.09e-19 84.0
MS.gene57863.t1 MTR_8g017090 34.351 131 75 3 7 129 12 139 2.95e-19 83.6
MS.gene57863.t1 MTR_8g079660 37.255 102 63 1 8 109 9 109 2.00e-17 78.2
MS.gene57863.t1 MTR_6g011250 35.922 103 64 2 8 109 10 111 2.04e-17 76.6
MS.gene57863.t1 MTR_8g079620 37.864 103 63 1 8 110 9 110 6.74e-17 76.3
MS.gene57863.t1 MTR_6g011230 39.506 81 48 1 7 87 11 90 4.87e-16 73.2
MS.gene57863.t1 MTR_2g100020 32.323 99 66 1 3 101 15 112 5.03e-16 74.3
MS.gene57863.t1 MTR_6g011200 32.381 105 69 2 6 109 8 111 9.10e-16 73.6
MS.gene57863.t1 MTR_5g085390 33.333 105 68 2 6 109 8 111 3.61e-14 68.9
MS.gene57863.t1 MTR_8g079580 35.789 95 59 2 8 101 9 102 1.61e-13 67.0
MS.gene57863.t1 MTR_4g099230 30.097 103 70 2 8 109 3 104 7.99e-13 63.5
MS.gene57863.t1 MTR_4g088035 31.111 90 61 1 6 95 5 93 2.61e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57863.t1 AT5G06080 52.406 187 73 3 1 187 1 171 1.40e-59 184
MS.gene57863.t1 AT3G58190 68.868 106 33 0 8 113 12 117 1.21e-50 163
MS.gene57863.t1 AT2G42440 60.656 122 43 1 1 117 1 122 1.25e-49 161
MS.gene57863.t1 AT2G42430 60.526 114 45 0 3 116 11 124 4.76e-47 154
MS.gene57863.t1 AT3G03760 61.607 112 43 0 6 117 50 161 6.91e-47 155
MS.gene57863.t1 AT4G00210 64.000 100 36 0 2 101 6 105 3.17e-46 152
MS.gene57863.t1 AT2G31310 48.344 151 77 1 1 150 1 151 3.53e-45 148
MS.gene57863.t1 AT2G45420 65.347 101 35 0 10 110 40 140 9.62e-44 147
MS.gene57863.t1 AT4G00220 61.386 101 39 0 10 110 20 120 1.62e-41 140
MS.gene57863.t1 AT2G45410 60.870 92 36 0 10 101 19 110 8.38e-39 132
MS.gene57863.t1 AT3G27650 54.639 97 43 1 6 102 38 133 1.20e-33 117
MS.gene57863.t1 AT5G63090 48.276 116 59 1 4 119 8 122 3.99e-33 117
MS.gene57863.t1 AT5G63090 48.276 116 59 1 4 119 8 122 3.99e-33 117
MS.gene57863.t1 AT5G63090 48.276 116 59 1 4 119 8 122 3.99e-33 117
MS.gene57863.t1 AT5G63090 48.276 116 59 1 4 119 8 122 3.99e-33 117
MS.gene57863.t1 AT2G30130 51.923 104 48 2 1 103 1 103 4.28e-32 115
MS.gene57863.t1 AT1G31320 53.261 92 42 1 3 94 9 99 8.28e-31 110
MS.gene57863.t1 AT2G28500 46.018 113 55 2 6 113 54 165 7.40e-30 110
MS.gene57863.t1 AT5G66870 50.000 102 50 1 1 102 1 101 1.28e-29 111
MS.gene57863.t1 AT1G07900 46.429 112 52 2 6 117 32 135 2.43e-29 107
MS.gene57863.t1 AT2G30340 51.515 99 47 1 6 104 52 149 3.45e-29 109
MS.gene57863.t1 AT2G30340 50.495 101 49 1 6 106 51 150 3.96e-29 109
MS.gene57863.t1 AT3G11090 40.496 121 70 2 6 125 10 129 4.47e-29 106
MS.gene57863.t1 AT3G26660 40.171 117 69 1 6 122 4 119 6.31e-29 104
MS.gene57863.t1 AT3G26620 45.833 96 51 1 6 101 4 98 1.78e-28 103
MS.gene57863.t1 AT1G16530 50.515 97 46 2 6 101 13 108 1.97e-27 102
MS.gene57863.t1 AT2G23660 47.917 96 49 1 6 101 4 98 8.71e-27 103
MS.gene57863.t1 AT2G23660 47.917 96 49 1 6 101 4 98 8.71e-27 103
MS.gene57863.t1 AT2G23660 47.917 96 49 1 6 101 4 98 8.71e-27 103
MS.gene57863.t1 AT1G65620 56.098 82 35 1 6 87 8 88 6.31e-26 99.4
MS.gene57863.t1 AT1G65620 56.098 82 35 1 6 87 8 88 6.31e-26 99.4
MS.gene57863.t1 AT1G65620 56.098 82 35 1 6 87 8 88 6.31e-26 99.4
MS.gene57863.t1 AT1G65620 56.098 82 35 1 6 87 8 88 6.31e-26 99.4
MS.gene57863.t1 AT1G65620 56.098 82 35 1 6 87 8 88 6.31e-26 99.4
MS.gene57863.t1 AT2G40470 51.220 82 39 1 6 87 19 99 5.44e-25 96.7
MS.gene57863.t1 AT2G40470 51.220 82 39 1 6 87 44 124 8.49e-25 97.1
MS.gene57863.t1 AT3G50510 40.708 113 66 1 1 113 6 117 4.37e-24 94.4
MS.gene57863.t1 AT3G50510 40.708 113 66 1 1 113 6 117 4.37e-24 94.4
MS.gene57863.t1 AT3G13850 36.893 103 64 1 7 109 36 137 7.55e-20 84.7
MS.gene57863.t1 AT3G47870 32.075 106 71 1 3 108 32 136 1.27e-17 79.7
MS.gene57863.t1 AT5G35900 35.294 119 70 4 6 123 4 116 1.79e-17 77.0
MS.gene57863.t1 AT1G06280 36.842 76 47 1 7 82 24 98 4.23e-16 73.6
MS.gene57863.t1 AT1G72980 31.683 101 68 1 3 103 9 108 1.43e-13 67.0
MS.gene57863.t1 AT4G22700 33.333 96 61 2 8 102 6 99 4.56e-12 62.4

Find 39 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGCAGTGCATAAGGTTTA+TGG 0.160867 5.2:+68313743 MS.gene57863:CDS
CGCATGCAAGATCCTATTTA+TGG 0.202738 5.2:+68313854 MS.gene57863:CDS
ATGATCCAAAACTTTGATTA+TGG 0.255926 5.2:-68314684 None:intergenic
AATTACCATAATCAAAGTTT+TGG 0.265734 5.2:+68314679 MS.gene57863:CDS
CAAGAGGAGATAGATATTCT+TGG 0.321470 5.2:+68314571 MS.gene57863:CDS
CTTTGGAAAATGACAGGGTT+TGG 0.324866 5.2:+68313623 None:intergenic
GGATTTCCAGAGCCTTTATA+TGG 0.325475 5.2:+68314739 MS.gene57863:CDS
TCTGGAAATCCTTGTGCATT+AGG 0.337625 5.2:-68314727 None:intergenic
ACATTAGAGAAGTTCTTATC+AGG 0.342216 5.2:+68314778 MS.gene57863:CDS
TGAGCAACACAACCATAAAT+AGG 0.353770 5.2:-68313866 None:intergenic
GCACCAATGAACTCAAATAA+TGG 0.356387 5.2:+68314649 MS.gene57863:CDS
CACCCTTGGTTCAAGCATAA+TGG 0.370662 5.2:+68314826 MS.gene57863:CDS
GTTCCATTATTTGAGTTCAT+TGG 0.371818 5.2:-68314652 None:intergenic
GCCTGTTCATAGGAGAAGTA+TGG 0.380890 5.2:-68313707 None:intergenic
GAGTTGGAATCACCATATAA+AGG 0.394155 5.2:-68314751 None:intergenic
TCCATACTTCTCCTATGAAC+AGG 0.425422 5.2:+68313706 MS.gene57863:CDS
CTTCTCTAATGTATTTGAGT+TGG 0.427053 5.2:-68314767 None:intergenic
CACTATATCTTATGAAGCCT+TGG 0.435812 5.2:+68313829 MS.gene57863:CDS
ATGAGCTGAAGCCTGTTCAT+AGG 0.437523 5.2:-68313717 None:intergenic
GAATCACCATATAAAGGCTC+TGG 0.448083 5.2:-68314745 None:intergenic
ATAAAACTTTGGAAAATGAC+AGG 0.453003 5.2:+68313617 None:intergenic
CACTAGCACACTTTCTCCTT+AGG 0.465254 5.2:-68313670 None:intergenic
AGGGCTTCTTGAACCACCCT+TGG 0.469455 5.2:+68314812 MS.gene57863:CDS
TATCTATGCATTGCAACATC+AGG 0.488764 5.2:+68313889 MS.gene57863:CDS
GTGGAGCATGCAAGTTCCTA+AGG 0.513337 5.2:+68313654 MS.gene57863:CDS
CTCCATTATGCTTGAACCAA+GGG 0.523653 5.2:-68314828 None:intergenic
AGGATCTTGCATGCGAGCCA+AGG 0.545581 5.2:-68313846 None:intergenic
AGATATTCTTGGAAGTGTAA+TGG 0.550072 5.2:+68314582 MS.gene57863:CDS
TCTCCATTATGCTTGAACCA+AGG 0.563541 5.2:-68314829 None:intergenic
TAATGGAGACATGAAGAACT+AGG 0.571172 5.2:+68314843 MS.gene57863:CDS
ACAGGGTTTGGCTCATCATG+TGG 0.589293 5.2:+68313635 MS.gene57863:CDS
GCAGGTTGCTAGCTTGCAAG+AGG 0.599304 5.2:+68314555 MS.gene57863:intron
CATTATGCTTGAACCAAGGG+TGG 0.607660 5.2:-68314825 None:intergenic
AGTGTTAGTGTTGTGAATTG+TGG 0.611640 5.2:+68314613 MS.gene57863:CDS
CTTATCAGGAATTGATCAAG+AGG 0.617949 5.2:+68314792 MS.gene57863:CDS
TAAAACTTTGGAAAATGACA+GGG 0.628064 5.2:+68313618 None:intergenic
TTATCAGGAATTGATCAAGA+GGG 0.643489 5.2:+68314793 MS.gene57863:CDS
GGCTTCATAAGATATAGTGA+TGG 0.646623 5.2:-68313825 None:intergenic
GAGCTAATTCCTAATGCACA+AGG 0.651993 5.2:+68314718 MS.gene57863:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAGTTTCATAAAATTA+CGG - chr5.2:68314201-68314220 None:intergenic 10.0%
!!! AATTACCATAATCAAAGTTT+TGG + chr5.2:68314679-68314698 MS.gene57863:CDS 20.0%
!!! ATTTTTTGTCAAAATCATGA+TGG + chr5.2:68314225-68314244 MS.gene57863:intron 20.0%
! ATAGTTTCATAAAATTACGG+TGG - chr5.2:68314198-68314217 None:intergenic 25.0%
! ATGATCCAAAACTTTGATTA+TGG - chr5.2:68314687-68314706 None:intergenic 25.0%
! ATGCATCAATATATAAGCAA+TGG - chr5.2:68314282-68314301 None:intergenic 25.0%
! TTTAAATTGTCGAACAATCA+TGG + chr5.2:68314122-68314141 MS.gene57863:intron 25.0%
!!! ACAACCATTGTTTTAAATTG+TGG - chr5.2:68314084-68314103 None:intergenic 25.0%
!!! GCTTGTTATAAATAAGAAGT+TGG + chr5.2:68314409-68314428 MS.gene57863:intron 25.0%
AATGGATGCTAGAAATATAG+CGG - chr5.2:68314264-68314283 None:intergenic 30.0%
ACATTAGAGAAGTTCTTATC+AGG + chr5.2:68314778-68314797 MS.gene57863:CDS 30.0%
ATTCAATGCATGTGTAAGTA+AGG - chr5.2:68314367-68314386 None:intergenic 30.0%
ATTTAAAAACCTTGGTTGTG+AGG - chr5.2:68314109-68314128 None:intergenic 30.0%
CTCTCCACAAAAAATTTCTT+AGG + chr5.2:68314444-68314463 MS.gene57863:intron 30.0%
CTTCTCTAATGTATTTGAGT+TGG - chr5.2:68314770-68314789 None:intergenic 30.0%
CTTTATATTGCACCAAAATG+CGG + chr5.2:68313973-68313992 MS.gene57863:intron 30.0%
GTTCGACAATTTAAAAACCT+TGG - chr5.2:68314117-68314136 None:intergenic 30.0%
TTATCAGGAATTGATCAAGA+GGG + chr5.2:68314793-68314812 MS.gene57863:CDS 30.0%
TTTCTTATGTGTGATTATGC+AGG + chr5.2:68314537-68314556 MS.gene57863:intron 30.0%
! AGATATTCTTGGAAGTGTAA+TGG + chr5.2:68314582-68314601 MS.gene57863:CDS 30.0%
! GGCCTAAAAAATTTTCTACA+CGG + chr5.2:68314465-68314484 MS.gene57863:intron 30.0%
! GTTCCATTATTTGAGTTCAT+TGG - chr5.2:68314655-68314674 None:intergenic 30.0%
! TTTTGGATCATACTTGGATA+TGG + chr5.2:68314696-68314715 MS.gene57863:CDS 30.0%
!! GCATCACTTCTATTTTGAAT+AGG - chr5.2:68313803-68313822 None:intergenic 30.0%
!!! TAGGCCTAAGAAATTTTTTG+TGG - chr5.2:68314451-68314470 None:intergenic 30.0%
!!! TCAAAGTTTTGGATCATACT+TGG + chr5.2:68314690-68314709 MS.gene57863:CDS 30.0%
AATGCATGTGTAAGTAAGGA+TGG - chr5.2:68314363-68314382 None:intergenic 35.0%
AGTGTTAGTGTTGTGAATTG+TGG + chr5.2:68314613-68314632 MS.gene57863:CDS 35.0%
ATATGCAGATAATGTGACCT+TGG + chr5.2:68314156-68314175 MS.gene57863:intron 35.0%
ATGACCTACACATAATTGTG+GGG + chr5.2:68314490-68314509 MS.gene57863:intron 35.0%
CAAGAGGAGATAGATATTCT+TGG + chr5.2:68314571-68314590 MS.gene57863:CDS 35.0%
CACCAAAATGCGGTAAAATA+TGG + chr5.2:68313983-68314002 MS.gene57863:intron 35.0%
CACTATATCTTATGAAGCCT+TGG + chr5.2:68313829-68313848 MS.gene57863:CDS 35.0%
CATGACCTACACATAATTGT+GGG + chr5.2:68314489-68314508 MS.gene57863:intron 35.0%
CTTATCAGGAATTGATCAAG+AGG + chr5.2:68314792-68314811 MS.gene57863:CDS 35.0%
GAGTTGGAATCACCATATAA+AGG - chr5.2:68314754-68314773 None:intergenic 35.0%
GCACCAATGAACTCAAATAA+TGG + chr5.2:68314649-68314668 MS.gene57863:CDS 35.0%
GGCTTCATAAGATATAGTGA+TGG - chr5.2:68313828-68313847 None:intergenic 35.0%
TATCTATGCATTGCAACATC+AGG + chr5.2:68313889-68313908 MS.gene57863:CDS 35.0%
TCGAACAATCATGGATATTG+TGG + chr5.2:68314131-68314150 MS.gene57863:intron 35.0%
TGAGCAACACAACCATAAAT+AGG - chr5.2:68313869-68313888 None:intergenic 35.0%
! CGGACCACAATTTAAAACAA+TGG + chr5.2:68314077-68314096 MS.gene57863:intron 35.0%
!! TCATTTTTCAGCAGTGCATA+AGG + chr5.2:68313736-68313755 MS.gene57863:CDS 35.0%
!!! GGCCGTGTAGAAAATTTTTT+AGG - chr5.2:68314470-68314489 None:intergenic 35.0%
CCACAATTATGTGTAGGTCA+TGG - chr5.2:68314491-68314510 None:intergenic 40.0%
CCATGACCTACACATAATTG+TGG + chr5.2:68314488-68314507 MS.gene57863:intron 40.0%
CGCATGCAAGATCCTATTTA+TGG + chr5.2:68313854-68313873 MS.gene57863:CDS 40.0%
CTCCATTATGCTTGAACCAA+GGG - chr5.2:68314831-68314850 None:intergenic 40.0%
GAATCACCATATAAAGGCTC+TGG - chr5.2:68314748-68314767 None:intergenic 40.0%
GAGCTAATTCCTAATGCACA+AGG + chr5.2:68314718-68314737 MS.gene57863:CDS 40.0%
GATCCAGAAAGTTGGAGTAA+TGG - chr5.2:68314341-68314360 None:intergenic 40.0%
GGATTTCCAGAGCCTTTATA+TGG + chr5.2:68314739-68314758 MS.gene57863:CDS 40.0%
TAAGGATGGATCCAGAAAGT+TGG - chr5.2:68314349-68314368 None:intergenic 40.0%
TCAGCAGTGCATAAGGTTTA+TGG + chr5.2:68313743-68313762 MS.gene57863:CDS 40.0%
TCCATACTTCTCCTATGAAC+AGG + chr5.2:68313706-68313725 MS.gene57863:CDS 40.0%
TCTCCATTATGCTTGAACCA+AGG - chr5.2:68314832-68314851 None:intergenic 40.0%
TCTGGAAATCCTTGTGCATT+AGG - chr5.2:68314730-68314749 None:intergenic 40.0%
TGACCTACACATAATTGTGG+GGG + chr5.2:68314491-68314510 MS.gene57863:intron 40.0%
TTGCGATTGTAATGTCGTTG+TGG + chr5.2:68314021-68314040 MS.gene57863:intron 40.0%
! ACATAATTGTGGGGGTGTAA+TGG + chr5.2:68314499-68314518 MS.gene57863:intron 40.0%
! ATGTGACCTTGGTGCATATT+TGG + chr5.2:68314167-68314186 MS.gene57863:intron 40.0%
! CGCCATATTTTACCGCATTT+TGG - chr5.2:68313988-68314007 None:intergenic 40.0%
ACACCCCCACAATTATGTGT+AGG - chr5.2:68314497-68314516 None:intergenic 45.0%
ATGAGCTGAAGCCTGTTCAT+AGG - chr5.2:68313720-68313739 None:intergenic 45.0%
CACCCTTGGTTCAAGCATAA+TGG + chr5.2:68314826-68314845 MS.gene57863:CDS 45.0%
CACTAGCACACTTTCTCCTT+AGG - chr5.2:68313673-68313692 None:intergenic 45.0%
CATTATGCTTGAACCAAGGG+TGG - chr5.2:68314828-68314847 None:intergenic 45.0%
CCAGAAAGTTGGAGTAATGG+AGG - chr5.2:68314338-68314357 None:intergenic 45.0%
CCTCCATTACTCCAACTTTC+TGG + chr5.2:68314335-68314354 MS.gene57863:intron 45.0%
GCCTGTTCATAGGAGAAGTA+TGG - chr5.2:68313710-68313729 None:intergenic 45.0%
GCTCATCCAAATATGCACCA+AGG - chr5.2:68314176-68314195 None:intergenic 45.0%
GCGGTAAAATATGGCGCATG+CGG + chr5.2:68313992-68314011 MS.gene57863:intron 50.0%
GTGGAGCATGCAAGTTCCTA+AGG + chr5.2:68313654-68313673 MS.gene57863:CDS 50.0%
TGGTTGTGACCTCACAACCA+AGG + chr5.2:68314097-68314116 MS.gene57863:intron 50.0%
TGTTGCCACAGTTGCAGTTG+CGG + chr5.2:68314057-68314076 MS.gene57863:intron 50.0%
! ACAGGGTTTGGCTCATCATG+TGG + chr5.2:68313635-68313654 MS.gene57863:CDS 50.0%
AGGATCTTGCATGCGAGCCA+AGG - chr5.2:68313849-68313868 None:intergenic 55.0%
AGGGCTTCTTGAACCACCCT+TGG + chr5.2:68314812-68314831 MS.gene57863:CDS 55.0%
! GCAGGTTGCTAGCTTGCAAG+AGG + chr5.2:68314555-68314574 MS.gene57863:intron 55.0%
GTGGTCCGCAACTGCAACTG+TGG - chr5.2:68314065-68314084 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 68313632 68314864 68313632 ID=MS.gene57863
chr5.2 mRNA 68313632 68314864 68313632 ID=MS.gene57863.t1;Parent=MS.gene57863
chr5.2 exon 68313632 68313910 68313632 ID=MS.gene57863.t1.exon1;Parent=MS.gene57863.t1
chr5.2 CDS 68313632 68313910 68313632 ID=cds.MS.gene57863.t1;Parent=MS.gene57863.t1
chr5.2 exon 68314559 68314864 68314559 ID=MS.gene57863.t1.exon2;Parent=MS.gene57863.t1
chr5.2 CDS 68314559 68314864 68314559 ID=cds.MS.gene57863.t1;Parent=MS.gene57863.t1
Gene Sequence

>MS.gene57863

ATGACAGGGTTTGGCTCATCATGTGGAGCATGCAAGTTCCTAAGGAGAAAGTGTGCTAGTGATTGTGTTTTTGCTCCATACTTCTCCTATGAACAGGCTTCAGCTCATTTTTCAGCAGTGCATAAGGTTTATGGAGCTAGTAATGTCTCTAGACTATTGTCACATCTTCCTATTCAAAATAGAAGTGATGCTGCCATCACTATATCTTATGAAGCCTTGGCTCGCATGCAAGATCCTATTTATGGTTGTGTTGCTCATATCTATGCATTGCAACATCAGGTTAATTTCTATGTTGTGATATGACTATGATTTTAAATTGCAATTGCAGTTACGTTGTGAATCTTTATATTGCACCAAAATGCGGTAAAATATGGCGCATGCGGTCGAAATTGCGATTGTAATGTCGTTGTGGATGTTAGTTAGATTGTTGCCACAGTTGCAGTTGCGGACCACAATTTAAAACAATGGTTGTGACCTCACAACCAAGGTTTTTAAATTGTCGAACAATCATGGATATTGTGGTCATATGCAGATAATGTGACCTTGGTGCATATTTGGATGAGCCACCGTAATTTTATGAAACTATTAAGTGTATTTTTTGTCAAAATCATGATGGCTTGTTATTCTCACCGCTATATTTCTAGCATCCATTGCTTATATATTGATGCATTTTTTGAGCAAATATTTCTAGTGTACGATTTTACCTCCATTACTCCAACTTTCTGGATCCATCCTTACTTACACATGCATTGAATAAAATTAAAACTCTAAAATTGTGCTTGTTATAAATAAGAAGTTGGATCTTACAAAGTCTCTCCACAAAAAATTTCTTAGGCCTAAAAAATTTTCTACACGGCCATGACCTACACATAATTGTGGGGGTGTAATGGTAAGAAGAGATAGATTTTCTTATGTGTGATTATGCAGGTTGCTAGCTTGCAAGAGGAGATAGATATTCTTGGAAGTGTAATGGCAAATTCAAGTGTTAGTGTTGTGAATTGTGGCAATGTTGATCAAGCACCAATGAACTCAAATAATGGAACACAAAATTACCATAATCAAAGTTTTGGATCATACTTGGATATGGAGCTAATTCCTAATGCACAAGGATTTCCAGAGCCTTTATATGGTGATTCCAACTCAAATACATTAGAGAAGTTCTTATCAGGAATTGATCAAGAGGGCTTCTTGAACCACCCTTGGTTCAAGCATAATGGAGACATGAAGAACTAG
Protein sequence

>MS.gene57863.t1

MTGFGSSCGACKFLRRKCASDCVFAPYFSYEQASAHFSAVHKVYGASNVSRLLSHLPIQNRSDAAITISYEALARMQDPIYGCVAHIYALQHQVASLQEEIDILGSVMANSSVSVVNCGNVDQAPMNSNNGTQNYHNQSFGSYLDMELIPNAQGFPEPLYGDSNSNTLEKFLSGIDQEGFLNHPWFKHNGDMKN